BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.0076.p (1145 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776040.1| sensor histidine kinase/response regulator p... 2325 0.0 ref|YP_004753580.1| two-component hybrid sensor and regulator [C... 1691 0.0 ref|YP_004355046.1| histidine kinase, Hybrid [Pseudomonas brassi... 1328 0.0 gb|AEA83416.1| sensor histidine kinase/response regulator [Pseud... 1315 0.0 ref|ZP_07233199.1| sensor histidine kinase/response regulator [P... 1289 0.0 ref|ZP_03397775.1| sensor histidine kinase/response regulator [P... 1287 0.0 ref|NP_793841.1| sensor histidine kinase/response regulator [Pse... 1287 0.0 gb|EGH97354.1| sensor histidine kinase/response regulator [Pseud... 1285 0.0 ref|YP_547421.1| periplasmic sensor hybrid histidine kinase [Pol... 1254 0.0 ref|YP_545871.1| periplasmic sensor hybrid histidine kinase [Met... 1241 0.0 >ref|YP_003776040.1| sensor histidine kinase/response regulator protein [Herbaspirillum seropedicae SmR1] gb|ADJ64132.1| sensor histidine kinase/response regulator protein [Herbaspirillum seropedicae SmR1] Length = 1145 Score = 2325 bits (6025), Expect = 0.0, Method: Compositional matrix adjust. Identities = 1143/1145 (99%), Positives = 1144/1145 (99%) Query: 1 VTHPATQRIVKVRRDYNTWVANETLEDYALRYTPLSFRRWSEFRLANTALGATSFLALEA 60 +THPATQRIVKVRRDYNTWVANETLEDYALRYTPLSFRRWSEFRLANTALGATSFLALEA Sbjct: 1 MTHPATQRIVKVRRDYNTWVANETLEDYALRYTPLSFRRWSEFRLANTALGATSFLALEA 60 Query: 61 ISGAITLSYGFTNAFWAIACVVLLFFLTGLPICYYAARYGVDMDLLTRGAGFGYIGSTIT 120 ISGAITLSYGFTNAFWAIACVVLLFFLTGLPICYYAARYGVDMDLLTRGAGFGYIGSTIT Sbjct: 61 ISGAITLSYGFTNAFWAIACVVLLFFLTGLPICYYAARYGVDMDLLTRGAGFGYIGSTIT 120 Query: 121 SLIYASFTFIFFALEAAIMAQAIEIYFGLPLVYGYVLCSIIIIPMVAYGITLINRLQMWT 180 SLIYASFTFIFFALEAAIMAQAIEIYFGLPLVYGYVLCSIIIIPMVAYGITLINRLQMWT Sbjct: 121 SLIYASFTFIFFALEAAIMAQAIEIYFGLPLVYGYVLCSIIIIPMVAYGITLINRLQMWT 180 Query: 181 QPLWLVLLVLPYVCVLYKEPDALSNLMSFAGRAEEGSSFNLTLFGAAATVAFSLIAQVGE 240 QPLWLVLLVLPYVCVLYKEPDALSNLMSFAGRAEEGSSFNLTLFGAAATVAFSLIAQVGE Sbjct: 181 QPLWLVLLVLPYVCVLYKEPDALSNLMSFAGRAEEGSSFNLTLFGAAATVAFSLIAQVGE 240 Query: 241 QVDFLRFLPQKTPANRGRWWSALLLAGPGWILLGGAKMLGGALLAFLAIQHEVPMARAVE 300 QVDFLRFLPQKTPANRGRWWSALLLAGPGWILLGGAKMLGGALLAFLAIQHEVPMARAVE Sbjct: 241 QVDFLRFLPQKTPANRGRWWSALLLAGPGWILLGGAKMLGGALLAFLAIQHEVPMARAVE 300 Query: 301 PTQMYLVGYQYVFGNPALALGAVVLFVVVSQIKINVTNAYAGSLAWSNFFARLTHSHPGR 360 PTQMYLVGYQYVFGNPALALGAVVLFVVVSQIKINVTNAYAGSLAWSNFFARLTHSHPGR Sbjct: 301 PTQMYLVGYQYVFGNPALALGAVVLFVVVSQIKINVTNAYAGSLAWSNFFARLTHSHPGR 360 Query: 361 VVWLVFNVLIAVLLMELGVFNALEHVLALYSLVAISWIGAVVADLVINKPLRLSPAHIEF 420 VVWLVFNVLIAVLLMELGVFNALEHVLALYSLVAISWIGAVVADLVINKPLRLSPAHIEF Sbjct: 361 VVWLVFNVLIAVLLMELGVFNALEHVLALYSLVAISWIGAVVADLVINKPLRLSPAHIEF 420 Query: 421 KRAHLYDVNPVGVGAMAIATLLSTLAMSGVLGKTVAAMAPFIALGTALASAPLIALATGS 480 KRAHLYDVNPVGVGAMAIATLLSTLAMSGVLGKTVAAMAPFIALGTALASAPLIALATGS Sbjct: 421 KRAHLYDVNPVGVGAMAIATLLSTLAMSGVLGKTVAAMAPFIALGTALASAPLIALATGS 480 Query: 481 RYYIARRDTLAEQNYRPVTPGQAQPVLACAICGNAFETPDMAHCPAYQGAICSLCCSLDA 540 RYYIARRDTLAEQNYRPVTPGQAQPVLACAICGNAFETPDMAHCPAYQGAICSLCCSLDA Sbjct: 481 RYYIARRDTLAEQNYRPVTPGQAQPVLACAICGNAFETPDMAHCPAYQGAICSLCCSLDA 540 Query: 541 RCKDRCKTPRARLPNQILHTLRQLIPARFAVKLNTRIGHYLSVFGLLAGGLAVVLWMLYF 600 RCKDRCKTPRARLPNQILHTLRQLIPARFAVKLNTRIGHYLSVFGLLAGGLAVVLWMLYF Sbjct: 541 RCKDRCKTPRARLPNQILHTLRQLIPARFAVKLNTRIGHYLSVFGLLAGGLAVVLWMLYF 600 Query: 601 QQMADLSGSGLDAPASLRSVFIKLFCLLLVVVGVGAWWLVLTNESRAVAQEESERQTNLL 660 QQMADLSGSGLDAPASLRSVFIKLFCLLLVVVGVGAWWLVLTNESRAVAQEESERQTNLL Sbjct: 601 QQMADLSGSGLDAPASLRSVFIKLFCLLLVVVGVGAWWLVLTNESRAVAQEESERQTNLL 660 Query: 661 LQEIEAHKQTDAELQRAKEAAESANLAKSRFVAGMSHELRTPLNSILGYAQILHVDATIP 720 LQEIEAHKQTDAELQRAKEAAESANLAKSRFVAGMSHELRTPLNSILGYAQILHVDATIP Sbjct: 661 LQEIEAHKQTDAELQRAKEAAESANLAKSRFVAGMSHELRTPLNSILGYAQILHVDATIP 720 Query: 721 PARKDAIGVIRRSGEHLLSLIDGLLDIAKIEAGKMRLASDELALEAFLEQIVGMFAPQAE 780 PARKDAIGVIRRSGEHLLSLIDGLLDIAKIEAGKMRLASDELALEAFLEQIVGMFAPQAE Sbjct: 721 PARKDAIGVIRRSGEHLLSLIDGLLDIAKIEAGKMRLASDELALEAFLEQIVGMFAPQAE 780 Query: 781 QKGLHFRFDKSGRLPQIVHADQKRLRQILINLLGNAVKFTDHGGVTLRLRYAREIAYFDV 840 QKGLHFRFDKSGRLPQIVHADQKRLRQILINLLGNAVKFTDHGGVTLRLRYAREIAYFDV Sbjct: 781 QKGLHFRFDKSGRLPQIVHADQKRLRQILINLLGNAVKFTDHGGVTLRLRYAREIAYFDV 840 Query: 841 IDTGIGIADDDRERIFLPFERSSAANLREDIGTGLGLAISRMLVHIMGGELSVQSQVGQG 900 IDTGIGIADDDRERIFLPFERSSAANLREDIGTGLGLAISRMLVHIMGGELSVQSQVGQG Sbjct: 841 IDTGIGIADDDRERIFLPFERSSAANLREDIGTGLGLAISRMLVHIMGGELSVQSQVGQG 900 Query: 901 SSFHLKIYLPEVHVPRPRIKLEDQMSGYAGPSRHILVVDDQASQRRLLKDMLMPLGFTVS 960 SSFHLKIYLPEVHVPRPRIKLEDQMSGYAGPSRHILVVDDQASQRRLLKDMLMPLGFTVS Sbjct: 901 SSFHLKIYLPEVHVPRPRIKLEDQMSGYAGPSRHILVVDDQASQRRLLKDMLMPLGFTVS 960 Query: 961 EADSGLACMETLGHALPDLVLLDIAMPQMDGWSVARAIPARGLAQLPILLVSANAFENLH 1020 EADSGLACMETLGHALPDLVLLDIAMPQMDGWSVARAI ARGLAQLPILLVSANAFENLH Sbjct: 961 EADSGLACMETLGHALPDLVLLDIAMPQMDGWSVARAIRARGLAQLPILLVSANAFENLH 1020 Query: 1021 ERNEPPLVNDFVVKPVSYHELLGKIRQHLQLDWVAAADAPTPAAPPPAPQALMLVPTQEK 1080 ERNEPPLVNDFVVKPVSYHELLGKIRQHLQLDWVAAADAPTPAAPPPAPQALMLVPTQEK Sbjct: 1021 ERNEPPLVNDFVVKPVSYHELLGKIRQHLQLDWVAAADAPTPAAPPPAPQALMLVPTQEK 1080 Query: 1081 LATLLELGSIGYAKEIVRQLDALERQDPAYLPFTTELRQLVRQFRLNEYVTRIKELIRHD 1140 LATLLELGSIGYAKEIVRQLDALERQDPAYLPFTTELRQLVRQFRLNEYVTRIKELIRHD Sbjct: 1081 LATLLELGSIGYAKEIVRQLDALERQDPAYLPFTTELRQLVRQFRLNEYVTRIKELIRHD 1140 Query: 1141 LNDVR 1145 LNDVR Sbjct: 1141 LNDVR 1145 >ref|YP_004753580.1| two-component hybrid sensor and regulator [Collimonas fungivorans Ter331] gb|AEK62757.1| Two-component hybrid sensor and regulator [Collimonas fungivorans Ter331] Length = 1181 Score = 1691 bits (4380), Expect = 0.0, Method: Compositional matrix adjust. Identities = 853/1135 (75%), Positives = 971/1135 (85%), Gaps = 11/1135 (0%) Query: 5 ATQRIVKVRRDYNTWVANETLEDYALRYTPLSFRRWSEFRLANTALGATSFLALEAISGA 64 ATQRIVKVRRDYNTWV NETLEDYALR+TP SFR+WSEFRLANTALGA SFLALEAISG Sbjct: 46 ATQRIVKVRRDYNTWVGNETLEDYALRFTPRSFRKWSEFRLANTALGAISFLALEAISGT 105 Query: 65 ITLSYGFTNAFWAIACVVLLFFLTGLPICYYAARYGVDMDLLTRGAGFGYIGSTITSLIY 124 ITL+YGF NAFWAI CV +LFFLTGLPI YYAA+YGVDMDLLTRGAGFGYIGSTITSLIY Sbjct: 106 ITLNYGFANAFWAIVCVSILFFLTGLPISYYAAKYGVDMDLLTRGAGFGYIGSTITSLIY 165 Query: 125 ASFTFIFFALEAAIMAQAIEIYFGLPLVYGYVLCSIIIIPMVAYGITLINRLQMWTQPLW 184 A+FTFIFFA+EA+IMAQAIE+YFGLPLV GY++C++++IP+V YGITLINRLQMWTQPLW Sbjct: 166 ATFTFIFFAVEASIMAQAIELYFGLPLVLGYIICALVVIPLVTYGITLINRLQMWTQPLW 225 Query: 185 LVLLVLPYVCVLYKEPDALSNLMSFAGRAEEGSSFNLTLFGAAATVAFSLIAQVGEQVDF 244 LVLLVLPYVCVL+KEPDAL+NLM+FAGRAE GSSF+L LFG+AATVAFSLIAQ+GEQVDF Sbjct: 226 LVLLVLPYVCVLHKEPDALANLMTFAGRAENGSSFDLVLFGSAATVAFSLIAQIGEQVDF 285 Query: 245 LRFLPQKTPANRGRWWSALLLAGPGWILLGGAKMLGGALLAFLAIQHEVPMARAVEPTQM 304 LRFLP+KT ANR RWWSALLLAGPGWILLG AKMLGGALLAFLAIQHEVP+ +AVEPTQM Sbjct: 286 LRFLPEKTSANRYRWWSALLLAGPGWILLGAAKMLGGALLAFLAIQHEVPIGKAVEPTQM 345 Query: 305 YLVGYQYVFGNPALALGAVVLFVVVSQIKINVTNAYAGSLAWSNFFARLTHSHPGRVVWL 364 YL+ Y+YVF +PAL L AV L VVVSQIKINVTNAYAGSLAWSNFFARLTHSHPGRVVWL Sbjct: 346 YLIAYRYVFSDPALVLAAVTLLVVVSQIKINVTNAYAGSLAWSNFFARLTHSHPGRVVWL 405 Query: 365 VFNVLIAVLLMELGVFNALEHVLALYSLVAISWIGAVVADLVINKPLRLSPAHIEFKRAH 424 VFNVLIA+LLME+GVFNALEHVLALY+LVAISWIGAVV+DLVINKPL LSP HIEFKRAH Sbjct: 406 VFNVLIALLLMEIGVFNALEHVLALYALVAISWIGAVVSDLVINKPLGLSPPHIEFKRAH 465 Query: 425 LYDVNPVGVGAMAIATLLSTLAMSGVLGKTVAAMAPFIALGTALASAPLIALATGSRYYI 484 LYD+NPVGVGAM IA+ LS LA+SG+ G A+APFIALG+AL AP+IA AT +YYI Sbjct: 466 LYDINPVGVGAMLIASALSALALSGMFGSVARALAPFIALGSALLIAPVIAYATKGKYYI 525 Query: 485 ARRDTLAEQNYRPVTPGQAQPVLACAICGNAFETPDMAHCPAYQGAICSLCCSLDARCKD 544 AR D LA+ ++ GQ L C ICGN FETPDMAHCPAYQGAICSLCCSLDARC D Sbjct: 526 ARHDQLADSHH-----GQ----LECVICGNHFETPDMAHCPAYQGAICSLCCSLDARCND 576 Query: 545 RCKTPRARLPNQILHTLRQLIPARFAVKLNTRIGHYLSVFGLLAGGLAVVLWMLYFQQMA 604 RCK +R+P+QI +TLR +P RF +KLNTRIGHYL VF L++GGLAVVLW+LY+QQ+A Sbjct: 577 RCKEA-SRMPDQIFNTLRGFLPERFTLKLNTRIGHYLIVFSLVSGGLAVVLWLLYYQQLA 635 Query: 605 DLSGSGLDAPASLRSVFIKLFCLLLVVVGVGAWWLVLTNESRAVAQEESERQTNLLLQEI 664 +SG P S+ +FIKLF LLV +GVG+WWLVLTNESR+VA EESERQTNLLLQEI Sbjct: 636 GMSGLAGGGPDSMAGIFIKLFASLLVFIGVGSWWLVLTNESRSVAHEESERQTNLLLQEI 695 Query: 665 EAHKQTDAELQRAKEAAESANLAKSRFVAGMSHELRTPLNSILGYAQILHVDATIPPARK 724 +AH QTDA LQRAKEAAE+ANLAKSRFV GMSHELRTPLNSILGYAQIL VD IP R+ Sbjct: 696 DAHNQTDAALQRAKEAAEAANLAKSRFVTGMSHELRTPLNSILGYAQILQVDHAIPEGRR 755 Query: 725 DAIGVIRRSGEHLLSLIDGLLDIAKIEAGKMRLASDELALEAFLEQIVGMFAPQAEQKGL 784 DAIGVIRRSGEHLLSLIDGLLDIAKIEAGKMRLA+DEL L FL+QIV MFAPQAEQKGL Sbjct: 756 DAIGVIRRSGEHLLSLIDGLLDIAKIEAGKMRLATDELPLHEFLDQIVQMFAPQAEQKGL 815 Query: 785 HFRFDKSGRLPQIVHADQKRLRQILINLLGNAVKFTDHGGVTLRLRYAREIAYFDVIDTG 844 FRF+K GR+P++V DQKRLRQILINLLGNAVKFTD G VTLR+R+AREI YF+V D+G Sbjct: 816 AFRFEKIGRIPEVVQVDQKRLRQILINLLGNAVKFTDAGHVTLRVRHAREITYFEVEDSG 875 Query: 845 IGIADDDRERIFLPFERSSAANLREDIGTGLGLAISRMLVHIMGGELSVQSQVGQGSSFH 904 IGIA++D R+FLPFERS+AANLREDIGTGLGLAIS ML HIMGG LSV S +G+GS+F Sbjct: 876 IGIAEEDIARVFLPFERSNAANLREDIGTGLGLAISSMLTHIMGGALSVASDIGKGSTFQ 935 Query: 905 LKIYLPEVHVPRPRIKLEDQMSGYAGPSRHILVVDDQASQRRLLKDMLMPLGFTVSEADS 964 LKIYL EV PR RIKLEDQMSGY GP + ILVVDDQASQR +L ML PLGF +SE S Sbjct: 936 LKIYLSEVRAPRRRIKLEDQMSGYLGPRKRILVVDDQASQRAVLSAMLAPLGFDISEVAS 995 Query: 965 GLACMETLGHALPDLVLLDIAMPQMDGWSVARAIPARGLAQLPILLVSANAFENLHERNE 1024 G AC+ + A+PD+VLLDIAMP MDG +V RAI ++G A LPI++VSANAFE+ ++ + Sbjct: 996 GAACLAEIARAMPDMVLLDIAMPAMDGGAVCRAIRSQGHASLPIIIVSANAFESTPQQID 1055 Query: 1025 PPLVNDFVVKPVSYHELLGKIRQHLQLDWVAAADAPTPAAPPPAPQALMLVPTQEKLATL 1084 P NDFVVKPVS+++LL KIR HL++DW++ AA A A+++VP +EKL L Sbjct: 1056 PLSYNDFVVKPVSFNDLLSKIRLHLKVDWISDPAP-QAAAGAAAGSAILVVPAREKLQAL 1114 Query: 1085 LELGSIGYAKEIVRQLDALERQDPAYLPFTTELRQLVRQFRLNEYVTRIKELIRH 1139 LELG+IGY K IV +LD +E+QDP Y PFT ELR+LV++FRLN+Y R++ L+ Sbjct: 1115 LELGAIGYIKGIVGKLDEIEQQDPLYQPFTRELRELVKRFRLNDYSARLQALLHQ 1169 >ref|YP_004355046.1| histidine kinase, Hybrid [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gb|AEA70042.1| putative Histidine kinase, Hybrid [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 1131 Score = 1328 bits (3438), Expect = 0.0, Method: Compositional matrix adjust. Identities = 671/1134 (59%), Positives = 822/1134 (72%), Gaps = 18/1134 (1%) Query: 4 PATQRIVKVRRDYNTWVANETLEDYALRYTPLSFRRWSEFRLANTALGATSFLALEAISG 63 P TQRI K+RRDYN+WVA+ET+EDYALRYTP SFR+WSE R+ANTALGA SFLALEAI G Sbjct: 4 PGTQRIAKIRRDYNSWVADETMEDYALRYTPKSFRKWSELRIANTALGAVSFLALEAIGG 63 Query: 64 AITLSYGFTNAFWAIACVVLLFFLTGLPICYYAARYGVDMDLLTRGAGFGYIGSTITSLI 123 + LSYGFTN FWAI V L+ FLTGLP+ YYAARYGVDMDLLTRGAGFGYIGSTITSLI Sbjct: 64 VLALSYGFTNTFWAILAVSLIIFLTGLPVSYYAARYGVDMDLLTRGAGFGYIGSTITSLI 123 Query: 124 YASFTFIFFALEAAIMAQAIEIYFGLPLVYGYVLCSIIIIPMVAYGITLINRLQMWTQPL 183 YASFTF+FFALEAAIMA A+E+YF +PL + YV+CS+++IP+VAYG+TLI+RLQ+WTQPL Sbjct: 124 YASFTFLFFALEAAIMALALELYFHIPLAFAYVICSVLVIPLVAYGVTLISRLQLWTQPL 183 Query: 184 WLVLLVLPYVCVLYKEPDALSNLMSFAGRAEEGSSFNLTLFGAAATVAFSLIAQVGEQVD 243 WL LLVLPY+ VL K P+A S+ SF GR G FNL F AA TVA SL+ Q+GEQVD Sbjct: 184 WLALLVLPYLFVLLKNPEAFSDWTSFQGRDTGGGDFNLLAFCAACTVALSLVTQIGEQVD 243 Query: 244 FLRFLPQKTPANRGRWWSALLLAGPGWILLGGAKMLGGALLAFLAIQHEVPMARAVEPTQ 303 +LRFLP+KT ANR RWW+ALL AGPGWIL G KM GA LAFLA+QHE+P+ RA EPTQ Sbjct: 244 YLRFLPEKTAANRKRWWAALLCAGPGWILPGALKMFAGAFLAFLALQHEIPIERATEPTQ 303 Query: 304 MYLVGYQYVFGNPALALGAVVLFVVVSQIKINVTNAYAGSLAWSNFFARLTHSHPGRVVW 363 MYLV + YVF +P AL A+VLFV VSQ+KIN+TNAYAGSLAWSNFFAR+THSHPGRVVW Sbjct: 304 MYLVAFGYVFASPEWALAAMVLFVFVSQMKINLTNAYAGSLAWSNFFARVTHSHPGRVVW 363 Query: 364 LVFNVLIAVLLMELGVFNALEHVLALYSLVAISWIGAVVADLVINKPLRLSPAHIEFKRA 423 LVFNV IA++LMELGVF+ ++ VL LY+ +AI+WIG+VVADLVINKPL LSP HIEFKRA Sbjct: 364 LVFNVAIALMLMELGVFDVIDQVLGLYANIAIAWIGSVVADLVINKPLGLSPKHIEFKRA 423 Query: 424 HLYDVNPVGVGAMAIATLLSTLAMSGVLGKTVAAMAPFIALGTALASAPLIALATGSRYY 483 HLYD+NPVGVG+M IA+LLS LA G+ G A PF+ALGT+L PL+A AT SRYY Sbjct: 424 HLYDINPVGVGSMLIASLLSVLAHFGLFGALAQAAPPFVALGTSLVMTPLLAWATRSRYY 483 Query: 484 IAR-RDTLAEQNYRPVTPGQAQPVLACAICGNAFETPDMAHCPAYQGAICSLCCSLDARC 542 IAR D L Q PV P + C +C N FET DMA CPAY ICSLCCSLDARC Sbjct: 484 IARTSDPLLLQ---PVAPSTQ---ITCGLCSNPFETADMAFCPAYSTPICSLCCSLDARC 537 Query: 543 KDRCKTPRARLPNQILHTLRQLIPARFAVKLNTRIGHYLSVFGLLAGGLAVVLWMLYFQQ 602 DRCK P RL Q L L+P +L+TR+ HYL + L L+ L ++Y Q Sbjct: 538 GDRCK-PHGRLSAQFEALLHWLLPNATVPRLHTRLVHYLGLLLALILMLSGALALIYGQA 596 Query: 603 MADLSGSGLDAPASLRSVFIKLFCLLLVVVGVGAWWLVLTNESRAVAQEESERQTNLLLQ 662 L S A A+L F K F L V+ + AWW+VLT ESR VAQEES+RQT LL+Q Sbjct: 597 SQGLPHSP-QAQATLYQAFFKAFLTLSVLAAILAWWVVLTRESRHVAQEESDRQTQLLMQ 655 Query: 663 EIEAHKQTDAELQRAKEAAESANLAKSRFVAGMSHELRTPLNSILGYAQILHVDATIPPA 722 EIEAH+ TD LQ AKEA+E+AN AKSR+V G+SHELRTPLNSILG+ QIL DA +P Sbjct: 656 EIEAHRLTDQALQDAKEASEAANAAKSRYVTGLSHELRTPLNSILGFTQILQRDAAMPEQ 715 Query: 723 RKDAIGVIRRSGEHLLSLIDGLLDIAKIEAGKMRLASDELALEAFLEQIVGMFAPQAEQK 782 +DA+ I RSG HLLSLIDGLLD+AKIEAGK+RL + E+ + + MF PQA K Sbjct: 716 HQDALATILRSGSHLLSLIDGLLDVAKIEAGKLRLEATEIPFPELIHDLELMFTPQARDK 775 Query: 783 GLHFRFDKSGRLPQIVHADQKRLRQILINLLGNAVKFTDHGGVTLRLRYAREIAYFDVID 842 GL FR + G++P +V D+KR+RQILINLLGNAV FTD G V LR+ Y RE A FD+ID Sbjct: 776 GLRFRLELIGKMPAVVRGDEKRVRQILINLLGNAVNFTDSGEVCLRVSYMRETATFDIID 835 Query: 843 TGIGIADDDRERIFLPFERSSAANLREDIGTGLGLAISRMLVHIMGGELSVQSQVGQGSS 902 TGIGI + ERIF PFER +R+D G GLGL I+RML +MGGEL V+SQ +G+ Sbjct: 836 TGIGIDPEHIERIFQPFERGDL--MRQDKGVGLGLTITRMLTSLMGGELQVKSQQDKGTC 893 Query: 903 FHLKIYLPEVHVPRPRIKLEDQMSGYAGPSRHILVVDDQASQRRLLKDMLMPLGFTVSEA 962 F ++++L +V VP+ I +E + GY GP R +LVVDD R++L ML PLGF V +A Sbjct: 894 FQVRLFLSQVRVPQAVIHVEHDIIGYQGPRRLVLVVDDHVDHRKVLSGMLTPLGFEVVQA 953 Query: 963 DSGLACMETLGHALPDLVLLDIAMPQMDGWSVARAIPARGLAQLPILLVSANAFENLHER 1022 +G + + PDL+L+D++MP MDGW +R I L+ PI+++SANAF + ER Sbjct: 954 SNGQEAIRQVALLGPDLILMDLSMPTMDGWETSRLIRRNALSTAPIIVISANAFNDERER 1013 Query: 1023 NEPPLVNDFVVKPVSYHELLGKIRQHLQLDWVAAADAPTPAA-PPPAPQALMLVPTQEKL 1081 + ND++ KPV ELL +I++ L L W+ + P PA P P ++P+Q L Sbjct: 1014 SLASACNDYLAKPVHTPELLERIQKQLDLHWL-RREKPAPATFPEPG-----ILPSQPDL 1067 Query: 1082 ATLLELGSIGYAKEIVRQLDALERQDPAYLPFTTELRQLVRQFRLNEYVTRIKE 1135 L EL +IGY + + +LDA++ + PA PF + LR+L++ FRL+E +KE Sbjct: 1068 IALGELSAIGYVRGLHEKLDAIQAETPATAPFISSLRKLLKNFRLDEINRALKE 1121 >gb|AEA83416.1| sensor histidine kinase/response regulator [Pseudomonas stutzeri DSM 4166] Length = 1135 Score = 1315 bits (3402), Expect = 0.0, Method: Compositional matrix adjust. Identities = 679/1131 (60%), Positives = 828/1131 (73%), Gaps = 18/1131 (1%) Query: 7 QRIVKVRRDYNTWVANETLEDYALRYTPLSFRRWSEFRLANTALGATSFLALEAISGAIT 66 QRIVK+RRDYN+WVA+ETLEDYALR+TP SFR+WSEFR+ANTALGA SFLALEAI G + Sbjct: 7 QRIVKIRRDYNSWVADETLEDYALRFTPKSFRKWSEFRIANTALGAVSFLALEAIGGTLA 66 Query: 67 LSYGFTNAFWAIACVVLLFFLTGLPICYYAARYGVDMDLLTRGAGFGYIGSTITSLIYAS 126 LSYGFTN WAI V L+ FLTGLPI YYAARYGVDMDLLTRGAGFGYIGSTITSLIYAS Sbjct: 67 LSYGFTNTLWAILAVALVIFLTGLPISYYAARYGVDMDLLTRGAGFGYIGSTITSLIYAS 126 Query: 127 FTFIFFALEAAIMAQAIEIYFGLPLVYGYVLCSIIIIPMVAYGITLINRLQMWTQPLWLV 186 FTF+FFALEAAIMA A+E+YF +PL YV+CS+II+P+V YGITLINRLQ+WTQPLWL Sbjct: 127 FTFLFFALEAAIMALALELYFSIPLALAYVVCSVIIVPLVTYGITLINRLQLWTQPLWLT 186 Query: 187 LLVLPYVCVLYKEPDALSNLMSFAGRAEEGSSFNLTLFGAAATVAFSLIAQVGEQVDFLR 246 LL+LPYV V+ K PDAL++L SFAGR G +FNL FGAA TVA +LI Q+GEQVD+LR Sbjct: 187 LLLLPYVFVIAKNPDALADLTSFAGREGNGGAFNLLSFGAACTVALALITQIGEQVDYLR 246 Query: 247 FLPQKTPANRGRWWSALLLAGPGWILLGGAKMLGGALLAFLAIQHEVPMARAVEPTQMYL 306 FLP+KT NR RWW A+L AGPGWI+ G KML GA LAFLA+QHE+P+ +A EPTQMYL Sbjct: 247 FLPEKTRQNRVRWWLAMLAAGPGWIIPGALKMLAGAFLAFLALQHEIPVDKAAEPTQMYL 306 Query: 307 VGYQYVFGNPALALGAVVLFVVVSQIKINVTNAYAGSLAWSNFFARLTHSHPGRVVWLVF 366 V + YVF +P AL A+VLFV+VSQ+KINVTNAYAGSLAWSNFFAR+THSHPGRVVWLVF Sbjct: 307 VAFSYVFASPEWALAAMVLFVIVSQVKINVTNAYAGSLAWSNFFARVTHSHPGRVVWLVF 366 Query: 367 NVLIAVLLMELGVFNALEHVLALYSLVAISWIGAVVADLVINKPLRLSPAHIEFKRAHLY 426 NV IA++LMELGVF A+E VL LY+ VAI+WIGA+VADLVINKPL LSP IEFKRAHLY Sbjct: 367 NVAIALMLMELGVFEAIEQVLGLYANVAIAWIGALVADLVINKPLGLSPRQIEFKRAHLY 426 Query: 427 DVNPVGVGAMAIATLLSTLAMSGVLGKTVAAMAPFIALGTALASAPLIALATGSRYYIAR 486 D+NPVGVG+M IA+LL+ LA SG+LG+ A +P IALGTAL APLIA TG R+YIAR Sbjct: 427 DINPVGVGSMLIASLLAILAHSGLLGELAQAASPVIALGTALLCAPLIAWLTGGRFYIAR 486 Query: 487 RDTLAEQNYRPVTPGQAQPVLACAICGNAFETPDMAHCPAYQGAICSLCCSLDARCKDRC 546 E+ + P + +AC +C NAFE PD A CPAY ICSLCCSLDARC D C Sbjct: 487 -----ERQPELLYPYTERGKIACVLCSNAFEEPDTAFCPAYGAPICSLCCSLDARCGDLC 541 Query: 547 KTPRARLPNQILHTLRQLIPARFAVKLNTRIGHYLSVFGLLAGGLAVVLWMLYFQQMADL 606 K P RL Q LR P +L+TR+ HYL V GL+ G L++ LW++Y Q + Sbjct: 542 K-PHGRLSAQWDAFLRWAFPQVSIPRLHTRLAHYLGVLGLIIGLLSLALWLIYSQVSLSV 600 Query: 607 SGSGLDAPASLRSVFIKLFCLLLVVVGVGAWWLVLTNESRAVAQEESERQTNLLLQEIEA 666 S + +L F+K F +L + G+ AWW+VLT ESR VAQ+ES+RQT+LL+QEIEA Sbjct: 601 VASPQETGETLYQAFLKAFLVLSLFAGILAWWVVLTRESRHVAQQESDRQTHLLMQEIEA 660 Query: 667 HKQTDAELQRAKEAAESANLAKSRFVAGMSHELRTPLNSILGYAQILHVDATIPPARKDA 726 H++TD +LQ+AKEA+E+AN AKSR+V G+SHELRTPLNSILGYAQIL D + P KDA Sbjct: 661 HRKTDEQLQKAKEASEAANAAKSRYVTGLSHELRTPLNSILGYAQILLRDEAMAPRHKDA 720 Query: 727 IGVIRRSGEHLLSLIDGLLDIAKIEAGKMRLASDELALEAFLEQIVGMFAPQAEQKGLHF 786 +G I RSG HLLSLIDGLLD+AKIEAGK+ L E+A FL+Q+ M APQAE+KGL F Sbjct: 721 LGTIHRSGAHLLSLIDGLLDVAKIEAGKLNLEQSEIAFPEFLQQLRQMIAPQAEEKGLRF 780 Query: 787 RFDKSGRLPQIVHADQKRLRQILINLLGNAVKFTDHGGVTLRLRYAREIAYFDVIDTGIG 846 F+ GR+P +V D+KR+RQILINLLGNAV++TD G +TLR Y RE A F++ DTGIG Sbjct: 781 HFESQGRMPAVVRGDEKRVRQILINLLGNAVRYTDAGSITLRASYLRETATFEIADTGIG 840 Query: 847 IADDDRERIFLPFERSSAANLREDIGTGLGLAISRMLVHIMGGELSVQSQVGQGSSFHLK 906 I + ER+F PFER + LR+D G GLGL I+RML +MGGELSV+SQ GQG+ F L+ Sbjct: 841 IPAEQIERLFQPFERGNP--LRQDNGLGLGLTITRMLTALMGGELSVKSQEGQGTVFQLR 898 Query: 907 IYLPEVHVPRPRIKLEDQMSGYAGPSRHILVVDDQASQRRLLKDMLMPLGFTVSEADSGL 966 ++L EV VP+ + +E + GY GP R +LVVDD R++L ML PLGF V A +G Sbjct: 899 LFLSEVRVPQAVVHVEHDIVGYHGPRRRVLVVDDHIEHRKVLAGMLEPLGFEVLMASNGQ 958 Query: 967 ACMETLGHALPDLVLLDIAMPQMDGWSVARAIPARGLAQLPILLVSANAFENLHERNEPP 1026 + PDL+L+D++MPQ+DGW AR + + PIL++SANAF + + Sbjct: 959 EALSQASLHNPDLILMDLSMPQLDGWQTARLMRRSLGSSAPILIISANAFVDGGSVSAD- 1017 Query: 1027 LVNDFVVKPVSYHELLGKIRQHLQLDWVAAADAPTPAAPPPAPQALMLVPTQEKLATLLE 1086 ND++ KPV LL KI Q L L+W+ AP P PP A VP L L + Sbjct: 1018 -CNDYLPKPVHAPVLLDKISQQLSLNWI--RRAPAPIQPPAISLA---VPA---LQALQQ 1068 Query: 1087 LGSIGYAKEIVRQLDALERQDPAYLPFTTELRQLVRQFRLNEYVTRIKELI 1137 S+GY + ++ LD L+ + PA LR L +F+LNE ++ E I Sbjct: 1069 QASLGYVRGVMELLDRLQHEAPAAAAQVETLRGLAARFQLNELSRQLDEAI 1119 >ref|ZP_07233199.1| sensor histidine kinase/response regulator [Pseudomonas syringae pv. tomato Max13] ref|ZP_07252266.1| sensor histidine kinase/response regulator [Pseudomonas syringae pv. tomato K40] ref|ZP_07256803.1| sensor histidine kinase/response regulator [Pseudomonas syringae pv. tomato NCPPB 1108] Length = 1123 Score = 1289 bits (3335), Expect = 0.0, Method: Compositional matrix adjust. Identities = 635/1135 (55%), Positives = 819/1135 (72%), Gaps = 22/1135 (1%) Query: 5 ATQRIVKVRRDYNTWVANETLEDYALRYTPLSFRRWSEFRLANTALGATSFLALEAISGA 64 +QRI+K+RRDYN VA+ET+EDYALR+TP SFR+WSE+R++NTA+GA SFLALEAI GA Sbjct: 5 GSQRIIKIRRDYNRLVADETMEDYALRFTPKSFRKWSEWRISNTAVGAVSFLALEAIGGA 64 Query: 65 ITLSYGFTNAFWAIACVVLLFFLTGLPICYYAARYGVDMDLLTRGAGFGYIGSTITSLIY 124 + +SYGFTN WAI L+ FLTGLPI YYAARYGVDMDLLTRGAGFGYIGSTITSLIY Sbjct: 65 LVISYGFTNTLWAILATALVIFLTGLPISYYAARYGVDMDLLTRGAGFGYIGSTITSLIY 124 Query: 125 ASFTFIFFALEAAIMAQAIEIYFGLPLVYGYVLCSIIIIPMVAYGITLINRLQMWTQPLW 184 ASFTF+FFALEAAIMA A+E+YF +P+ Y++CSII+IP+ YG+TLI+RLQMW+QPLW Sbjct: 125 ASFTFLFFALEAAIMALALELYFHIPIALAYIICSIIVIPLAVYGVTLISRLQMWSQPLW 184 Query: 185 LVLLVLPYVCVLYKEPDALSNLMSFAGRAEEGSSFNLTLFGAAATVAFSLIAQVGEQVDF 244 L LL++PYV V++K PDAL + +SF+GR EG +F+L FGAA +VA SL+ Q+GEQVD+ Sbjct: 185 LTLLLVPYVFVIWKNPDALGDWLSFSGREGEGGTFDLLFFGAAFSVALSLVTQIGEQVDY 244 Query: 245 LRFLPQKTPANRGRWWSALLLAGPGWILLGGAKMLGGALLAFLAIQHEVPMARAVEPTQM 304 LRFLP+KT NR RWW+ALL+AGPGWI+ G K++ GA LAFLA+QHEVP+ RA EPTQM Sbjct: 245 LRFLPEKTRHNRKRWWAALLMAGPGWIIPGALKIMAGAFLAFLALQHEVPVERAAEPTQM 304 Query: 305 YLVGYQYVFGNPALALGAVVLFVVVSQIKINVTNAYAGSLAWSNFFARLTHSHPGRVVWL 364 YLV ++YVF +P AL A+ LFV++SQIKIN+TNAYAGSLAWSNFF R+THSHPGRVVWL Sbjct: 305 YLVAFRYVFSSPEWALAAMTLFVIISQIKINMTNAYAGSLAWSNFFVRVTHSHPGRVVWL 364 Query: 365 VFNVLIAVLLMELGVFNALEHVLALYSLVAISWIGAVVADLVINKPLRLSPAHIEFKRAH 424 VFNV IA++LMELGVF+A+E VL LY+ VAI+WIGA+VADLVINKP+ SP HIEFKRAH Sbjct: 365 VFNVAIALVLMELGVFDAIEQVLGLYANVAIAWIGALVADLVINKPMGWSPKHIEFKRAH 424 Query: 425 LYDVNPVGVGAMAIATLLSTLAMSGVLGKTVAAMAPFIALGTALASAPLIALATGSRYYI 484 LYD+NPVGVGAM+IA+L+S A G+ G A P I+L AL +APL+A T +YYI Sbjct: 425 LYDINPVGVGAMSIASLVSFCAHFGLFGAIAQAAPPLISLAIALVTAPLLAWLTDGKYYI 484 Query: 485 AR--RDTLAEQNYRPVTPGQAQPVLACAICGNAFETPDMAHCPAYQGAICSLCCSLDARC 542 AR DTL + P Q L C +C NAFETPDMA+CPAY+ ICSLCCSLDARC Sbjct: 485 ARTSSDTL-------LYPQGRQESLLCGLCNNAFETPDMAYCPAYRTPICSLCCSLDARC 537 Query: 543 KDRCKTPRARLPNQILHTLRQLIPARFAVKLNTRIGHYLSVFGLLAGGLAVVLWMLYFQQ 602 D+CK PRARL Q + +++P L+TR+ YL + +L G + L ++Y Q Sbjct: 538 GDQCK-PRARLSMQFEDLIGKMLPRFPRHYLHTRLAQYLGLLTILVAGSSGALALIYNQV 596 Query: 603 MADLSGSGLDAPASLRSVFIKLFCLLLVVVGVGAWWLVLTNESRAVAQEESERQTNLLLQ 662 L +A L F+K F + V GV AWW+VLT ESR VAQEESERQT+LL+Q Sbjct: 597 AHGLIDQSPEAHHLLMLAFLKAFLTVCVFAGVLAWWVVLTRESRLVAQEESERQTSLLIQ 656 Query: 663 EIEAHKQTDAELQRAKEAAESANLAKSRFVAGMSHELRTPLNSILGYAQILHVDATIPPA 722 EI+AH++TD LQ+AKEA+E+AN AKSR++ G+SHELRTPLNSILG+ QIL D T PP Sbjct: 657 EIDAHEKTDQALQKAKEASEAANAAKSRYITGLSHELRTPLNSILGFTQILQRDTTTPPH 716 Query: 723 RKDAIGVIRRSGEHLLSLIDGLLDIAKIEAGKMRLASDELALEAFLEQIVGMFAPQAEQK 782 +D + I RS HLLSLI+GLLD+AKIEAGK++L E+ + FL + MFA A++K Sbjct: 717 HQDPLATIMRSSSHLLSLINGLLDVAKIEAGKLKLEPTEILFQEFLHDLEKMFAGTAQEK 776 Query: 783 GLHFRFDKSGRLPQIVHADQKRLRQILINLLGNAVKFTDHGGVTLRLRYAREIAYFDVID 842 L FR + GR+P +V D+KR+RQILINLLGNAV FTD G V LR+ Y RE A FD++D Sbjct: 777 NLGFRLELEGRMPMVVRGDEKRVRQILINLLGNAVNFTDSGEVVLRVSYRRETAIFDIVD 836 Query: 843 TGIGIADDDRERIFLPFERSSAANLREDIGTGLGLAISRMLVHIMGGELSVQSQVGQGSS 902 +GIGIA + ERIF PFER R D G GLGL I+RML +MGG LSV S G+G+ Sbjct: 837 SGIGIAPEQIERIFQPFER--GGQTRHDNGVGLGLTITRMLTALMGGALSVSSTPGEGTH 894 Query: 903 FHLKIYLPEVHVPRPRIKLEDQMSGYAGPSRHILVVDDQASQRRLLKDMLMPLGFTVSEA 962 F ++++L EV VP+ I + + GY G R +LVVDD R+++ ML PLGFTV++A Sbjct: 895 FKVRLFLSEVRVPKAVIDVNHDVVGYDGERRLVLVVDDHIEHRKVISGMLEPLGFTVAQA 954 Query: 963 DSGLACMETLGHALPDLVLLDIAMPQMDGWSVARAIPARGLAQLPILLVSANAFENLHER 1022 ++G+ + + PDL+L+D++MP MDGW+ R I + P++++SANA + Sbjct: 955 ENGMEAVRQVSLLHPDLILMDLSMPDMDGWATLRMIRRNARSNAPVIVLSANA----NAS 1010 Query: 1023 NEPPLVNDFVVKPVSYHELLGKIRQHLQLDWVAAADAPTPAAPPPAPQALMLVPTQEKLA 1082 + + +D++ KPV +LL +++ HL L+W + + P ++P +E L Sbjct: 1011 TDDDIGHDYLSKPVHLRDLLDRLKHHLNLNWQHRSRTASETKTP------WILPPREDLE 1064 Query: 1083 TLLELGSIGYAKEIVRQLDALERQDPAYLPFTTELRQLVRQFRLNEYVTRIKELI 1137 L L +GY + I +LDA+E + A F T+LR L + FRL+E +KE++ Sbjct: 1065 DLYTLCGLGYVRGIQNKLDAIETSNIASGSFVTDLRALAKGFRLDELSLHLKEML 1119 >ref|ZP_03397775.1| sensor histidine kinase/response regulator [Pseudomonas syringae pv. tomato T1] gb|EEB59294.1| sensor histidine kinase/response regulator [Pseudomonas syringae pv. tomato T1] Length = 1161 Score = 1287 bits (3331), Expect = 0.0, Method: Compositional matrix adjust. Identities = 635/1135 (55%), Positives = 819/1135 (72%), Gaps = 22/1135 (1%) Query: 5 ATQRIVKVRRDYNTWVANETLEDYALRYTPLSFRRWSEFRLANTALGATSFLALEAISGA 64 +QRI+K+RRDYN VA+ET+EDYALR+TP SFR+WSE+R++NTA+GA SFLALEAI GA Sbjct: 43 GSQRIIKIRRDYNRLVADETMEDYALRFTPKSFRKWSEWRISNTAVGAVSFLALEAIGGA 102 Query: 65 ITLSYGFTNAFWAIACVVLLFFLTGLPICYYAARYGVDMDLLTRGAGFGYIGSTITSLIY 124 + +SYGFTN WAI L+ FLTGLPI YYAARYGVDMDLLTRGAGFGYIGSTITSLIY Sbjct: 103 LVISYGFTNTLWAILATALVIFLTGLPISYYAARYGVDMDLLTRGAGFGYIGSTITSLIY 162 Query: 125 ASFTFIFFALEAAIMAQAIEIYFGLPLVYGYVLCSIIIIPMVAYGITLINRLQMWTQPLW 184 ASFTF+FFALEAAIMA A+E+YF +P+ Y++CSII+IP+ YG+TLI+RLQMW+QPLW Sbjct: 163 ASFTFLFFALEAAIMALALELYFHIPIALAYIICSIIVIPLAVYGVTLISRLQMWSQPLW 222 Query: 185 LVLLVLPYVCVLYKEPDALSNLMSFAGRAEEGSSFNLTLFGAAATVAFSLIAQVGEQVDF 244 L LL++PYV V++K PDAL + +SF+GR EG +F+L FGAA +VA SL+ Q+GEQVD+ Sbjct: 223 LTLLLVPYVFVIWKNPDALGDWLSFSGREGEGGTFDLLFFGAAFSVALSLVTQIGEQVDY 282 Query: 245 LRFLPQKTPANRGRWWSALLLAGPGWILLGGAKMLGGALLAFLAIQHEVPMARAVEPTQM 304 LRFLP+KT NR RWW+ALL+AGPGWI+ G K++ GA LAFLA+QHEVP+ RA EPTQM Sbjct: 283 LRFLPEKTRHNRKRWWAALLMAGPGWIIPGALKIMAGAFLAFLALQHEVPVERAAEPTQM 342 Query: 305 YLVGYQYVFGNPALALGAVVLFVVVSQIKINVTNAYAGSLAWSNFFARLTHSHPGRVVWL 364 YLV ++YVF +P AL A+ LFV++SQIKIN+TNAYAGSLAWSNFF R+THSHPGRVVWL Sbjct: 343 YLVAFRYVFSSPEWALAAMTLFVIISQIKINMTNAYAGSLAWSNFFVRVTHSHPGRVVWL 402 Query: 365 VFNVLIAVLLMELGVFNALEHVLALYSLVAISWIGAVVADLVINKPLRLSPAHIEFKRAH 424 VFNV IA++LMELGVF+A+E VL LY+ VAI+WIGA+VADLVINKP+ SP HIEFKRAH Sbjct: 403 VFNVAIALVLMELGVFDAIEQVLGLYANVAIAWIGALVADLVINKPMGWSPKHIEFKRAH 462 Query: 425 LYDVNPVGVGAMAIATLLSTLAMSGVLGKTVAAMAPFIALGTALASAPLIALATGSRYYI 484 LYD+NPVGVGAM+IA+L+S A G+ G A P I+L AL +APL+A T +YYI Sbjct: 463 LYDINPVGVGAMSIASLVSFCAHFGLFGAIAQAAPPLISLAIALVTAPLLAWLTDGKYYI 522 Query: 485 AR--RDTLAEQNYRPVTPGQAQPVLACAICGNAFETPDMAHCPAYQGAICSLCCSLDARC 542 AR DTL + P Q L C +C NAFETPDMA+CPAY+ ICSLCCSLDARC Sbjct: 523 ARTSSDTL-------LYPQGRQESLLCGLCNNAFETPDMAYCPAYRTPICSLCCSLDARC 575 Query: 543 KDRCKTPRARLPNQILHTLRQLIPARFAVKLNTRIGHYLSVFGLLAGGLAVVLWMLYFQQ 602 D+CK PRARL Q + +++P L+TR+ YL + +L G + L ++Y Q Sbjct: 576 GDQCK-PRARLSMQFEDLIGKMLPRFPRHYLHTRLAQYLGLLTILVAGSSGALALIYNQV 634 Query: 603 MADLSGSGLDAPASLRSVFIKLFCLLLVVVGVGAWWLVLTNESRAVAQEESERQTNLLLQ 662 L +A L F+K F + V GV AWW+VLT ESR VAQEESERQT+LL+Q Sbjct: 635 AHGLIDQSPEAHHLLMLAFLKAFLTVCVFAGVLAWWVVLTRESRLVAQEESERQTSLLIQ 694 Query: 663 EIEAHKQTDAELQRAKEAAESANLAKSRFVAGMSHELRTPLNSILGYAQILHVDATIPPA 722 EI+AH++TD LQ+AKEA+E+AN AKSR++ G+SHELRTPLNSILG+ QIL D T PP Sbjct: 695 EIDAHEKTDQALQKAKEASEAANAAKSRYITGLSHELRTPLNSILGFTQILQRDTTTPPH 754 Query: 723 RKDAIGVIRRSGEHLLSLIDGLLDIAKIEAGKMRLASDELALEAFLEQIVGMFAPQAEQK 782 +D + I RS HLLSLI+GLLD+AKIEAGK++L E+ + FL + MFA A++K Sbjct: 755 HQDPLATIMRSSSHLLSLINGLLDVAKIEAGKLKLEPTEILFQEFLHDLEKMFAGTAQEK 814 Query: 783 GLHFRFDKSGRLPQIVHADQKRLRQILINLLGNAVKFTDHGGVTLRLRYAREIAYFDVID 842 L FR + GR+P +V D+KR+RQILINLLGNAV FTD G V LR+ Y RE A FD++D Sbjct: 815 NLGFRLELEGRMPMVVRGDEKRVRQILINLLGNAVNFTDSGEVVLRVSYRRETAIFDIVD 874 Query: 843 TGIGIADDDRERIFLPFERSSAANLREDIGTGLGLAISRMLVHIMGGELSVQSQVGQGSS 902 +GIGIA + ERIF PFER R D G GLGL I+RML +MGG LSV S G+G+ Sbjct: 875 SGIGIAPEQIERIFQPFER--GGQTRHDNGVGLGLTITRMLTALMGGALSVSSTPGEGTH 932 Query: 903 FHLKIYLPEVHVPRPRIKLEDQMSGYAGPSRHILVVDDQASQRRLLKDMLMPLGFTVSEA 962 F ++++L EV VP+ I + + GY G R +LVVDD R+++ ML PLGFTV++A Sbjct: 933 FKVRLFLSEVRVPKAVIDVNHDVVGYDGERRLVLVVDDHIEHRKVISGMLEPLGFTVAQA 992 Query: 963 DSGLACMETLGHALPDLVLLDIAMPQMDGWSVARAIPARGLAQLPILLVSANAFENLHER 1022 ++G+ + + PDL+L+D++MP MDGW+ R I + P++++SANA + Sbjct: 993 ENGMEAVRQVSLLHPDLILMDLSMPDMDGWATLRMIRRNARSNAPVIVLSANA----NAS 1048 Query: 1023 NEPPLVNDFVVKPVSYHELLGKIRQHLQLDWVAAADAPTPAAPPPAPQALMLVPTQEKLA 1082 + + +D++ KPV +LL +++ HL L+W + + P ++P +E L Sbjct: 1049 TDDDIGHDYLSKPVHLRDLLDRLKHHLNLNWQHRSRTASETKTP------WILPPREDLE 1102 Query: 1083 TLLELGSIGYAKEIVRQLDALERQDPAYLPFTTELRQLVRQFRLNEYVTRIKELI 1137 L L +GY + I +LDA+E + A F T+LR L + FRL+E +KE++ Sbjct: 1103 DLYTLCGLGYVRGIQNKLDAIETSNIASGSFVTDLRALAKGFRLDELSLHLKEML 1157 >ref|NP_793841.1| sensor histidine kinase/response regulator [Pseudomonas syringae pv. tomato str. DC3000] gb|AAO57536.1| sensor histidine kinase/response regulator [Pseudomonas syringae pv. tomato str. DC3000] Length = 1161 Score = 1287 bits (3330), Expect = 0.0, Method: Compositional matrix adjust. Identities = 635/1135 (55%), Positives = 819/1135 (72%), Gaps = 22/1135 (1%) Query: 5 ATQRIVKVRRDYNTWVANETLEDYALRYTPLSFRRWSEFRLANTALGATSFLALEAISGA 64 +QRI+K+RRDYN VA+ET+EDYALR+TP SFR+WSE+R++NTA+GA SFLALEAI GA Sbjct: 43 GSQRIIKIRRDYNRLVADETMEDYALRFTPKSFRKWSEWRISNTAVGAVSFLALEAIGGA 102 Query: 65 ITLSYGFTNAFWAIACVVLLFFLTGLPICYYAARYGVDMDLLTRGAGFGYIGSTITSLIY 124 + +SYGFTN WAI L+ FLTGLPI YYAARYGVDMDLLTRGAGFGYIGSTITSLIY Sbjct: 103 LVISYGFTNTLWAILATALVIFLTGLPISYYAARYGVDMDLLTRGAGFGYIGSTITSLIY 162 Query: 125 ASFTFIFFALEAAIMAQAIEIYFGLPLVYGYVLCSIIIIPMVAYGITLINRLQMWTQPLW 184 ASFTF+FFALEAAIMA A+E+YF +P+ Y++CSII+IP+ YG+TLI+RLQMW+QPLW Sbjct: 163 ASFTFLFFALEAAIMALALELYFHIPIALAYIICSIIVIPLAVYGVTLISRLQMWSQPLW 222 Query: 185 LVLLVLPYVCVLYKEPDALSNLMSFAGRAEEGSSFNLTLFGAAATVAFSLIAQVGEQVDF 244 L LL++PYV V++K PDAL + +SF+GR EG +F+L FGAA +VA SL+ Q+GEQVD+ Sbjct: 223 LTLLLVPYVFVIWKNPDALGDWLSFSGREGEGGTFDLLFFGAAFSVALSLVTQIGEQVDY 282 Query: 245 LRFLPQKTPANRGRWWSALLLAGPGWILLGGAKMLGGALLAFLAIQHEVPMARAVEPTQM 304 LRFLP+KT NR RWW+ALL+AGPGWI+ G K++ GA LAFLA+QHEVP+ RA EPTQM Sbjct: 283 LRFLPEKTRHNRKRWWAALLMAGPGWIIPGALKIMAGAFLAFLALQHEVPVERAAEPTQM 342 Query: 305 YLVGYQYVFGNPALALGAVVLFVVVSQIKINVTNAYAGSLAWSNFFARLTHSHPGRVVWL 364 YLV ++YVF +P AL A+ LFV++SQIKIN+TNAYAGSLAWSNFF R+THSHPGRVVWL Sbjct: 343 YLVAFRYVFSSPEWALAAMTLFVIISQIKINMTNAYAGSLAWSNFFVRVTHSHPGRVVWL 402 Query: 365 VFNVLIAVLLMELGVFNALEHVLALYSLVAISWIGAVVADLVINKPLRLSPAHIEFKRAH 424 VFNV IA++LMELGVF+A+E VL LY+ VAI+WIGA+VADLVINKP+ SP HIEFKRAH Sbjct: 403 VFNVAIALVLMELGVFDAIEQVLGLYANVAIAWIGALVADLVINKPMGWSPKHIEFKRAH 462 Query: 425 LYDVNPVGVGAMAIATLLSTLAMSGVLGKTVAAMAPFIALGTALASAPLIALATGSRYYI 484 LYD+NPVGVGAM+IA+L+S A G+ G A P I+L AL +APL+A T +YYI Sbjct: 463 LYDINPVGVGAMSIASLVSFCAHFGLFGAIAQAAPPLISLAIALVTAPLLAWLTDGKYYI 522 Query: 485 AR--RDTLAEQNYRPVTPGQAQPVLACAICGNAFETPDMAHCPAYQGAICSLCCSLDARC 542 AR DTL + P Q L C +C NAFETPDMA+CPAY+ ICSLCCSLDARC Sbjct: 523 ARTSSDTL-------LYPQGRQESLLCGLCNNAFETPDMAYCPAYRTPICSLCCSLDARC 575 Query: 543 KDRCKTPRARLPNQILHTLRQLIPARFAVKLNTRIGHYLSVFGLLAGGLAVVLWMLYFQQ 602 D+CK PRARL Q + +++P L+TR+ YL + +L G + L ++Y Q Sbjct: 576 GDQCK-PRARLSMQFEDLIGKVLPRFPRHYLHTRLAQYLGLLTILVAGSSGALALIYNQV 634 Query: 603 MADLSGSGLDAPASLRSVFIKLFCLLLVVVGVGAWWLVLTNESRAVAQEESERQTNLLLQ 662 L +A L F+K F + V GV AWW+VLT ESR VAQEESERQT+LL+Q Sbjct: 635 AHGLIDQSPEAHHLLMLAFLKAFLTVCVFAGVLAWWVVLTRESRRVAQEESERQTSLLIQ 694 Query: 663 EIEAHKQTDAELQRAKEAAESANLAKSRFVAGMSHELRTPLNSILGYAQILHVDATIPPA 722 EI+AH++TD LQ+AKEA+E+AN AKSR++ G+SHELRTPLNSILG+ QIL D T PP Sbjct: 695 EIDAHEKTDQALQKAKEASEAANAAKSRYITGLSHELRTPLNSILGFTQILQRDTTTPPH 754 Query: 723 RKDAIGVIRRSGEHLLSLIDGLLDIAKIEAGKMRLASDELALEAFLEQIVGMFAPQAEQK 782 +D + I RS HLLSLI+GLLD+AKIEAGK++L E+ + FL + MFA A++K Sbjct: 755 HQDPLATIMRSSSHLLSLINGLLDVAKIEAGKLKLEPTEILFQEFLHDLEKMFAGTAQEK 814 Query: 783 GLHFRFDKSGRLPQIVHADQKRLRQILINLLGNAVKFTDHGGVTLRLRYAREIAYFDVID 842 L FR + GR+P +V D+KR+RQILINLLGNAV FTD G V LR+ Y RE A FD++D Sbjct: 815 NLGFRLELEGRMPMVVRGDEKRVRQILINLLGNAVNFTDSGEVVLRVSYRRETAIFDIVD 874 Query: 843 TGIGIADDDRERIFLPFERSSAANLREDIGTGLGLAISRMLVHIMGGELSVQSQVGQGSS 902 +GIGIA + ERIF PFER R D G GLGL I+RML +MGG LSV S G+G+ Sbjct: 875 SGIGIAPEQIERIFQPFER--GGQTRHDNGVGLGLTITRMLTALMGGALSVSSTPGEGTH 932 Query: 903 FHLKIYLPEVHVPRPRIKLEDQMSGYAGPSRHILVVDDQASQRRLLKDMLMPLGFTVSEA 962 F ++++L EV VP+ I + + GY G R +LVVDD R+++ ML PLGFTV++A Sbjct: 933 FKVRLFLSEVRVPKAVIDVNHDVVGYDGERRLVLVVDDHIEHRKVISGMLEPLGFTVAQA 992 Query: 963 DSGLACMETLGHALPDLVLLDIAMPQMDGWSVARAIPARGLAQLPILLVSANAFENLHER 1022 ++G+ + + PDL+L+D++MP MDGW+ R I + P++++SANA + Sbjct: 993 ENGMEAVRQVSLLHPDLILMDLSMPDMDGWATLRMIRRNARSNAPVIVLSANA----NAS 1048 Query: 1023 NEPPLVNDFVVKPVSYHELLGKIRQHLQLDWVAAADAPTPAAPPPAPQALMLVPTQEKLA 1082 + + +D++ KPV +LL +++ HL L+W + + P ++P +E L Sbjct: 1049 TDDDIGHDYLSKPVHLRDLLDRLKHHLNLNWQHRSRTASETKTP------WILPPREDLE 1102 Query: 1083 TLLELGSIGYAKEIVRQLDALERQDPAYLPFTTELRQLVRQFRLNEYVTRIKELI 1137 L L +GY + I +LDA+E + A F T+LR L + FRL+E +KE++ Sbjct: 1103 DLYTLCGLGYVRGIQNKLDAIETSNIASGSFVTDLRALAKGFRLDELSLHLKEML 1157 >gb|EGH97354.1| sensor histidine kinase/response regulator [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 1123 Score = 1285 bits (3324), Expect = 0.0, Method: Compositional matrix adjust. Identities = 634/1135 (55%), Positives = 818/1135 (72%), Gaps = 22/1135 (1%) Query: 5 ATQRIVKVRRDYNTWVANETLEDYALRYTPLSFRRWSEFRLANTALGATSFLALEAISGA 64 +QRI+K+RRDYN VA+ET+EDYALR+TP SFR+WSE+R++NTA+GA SFLALEAI GA Sbjct: 5 GSQRIIKIRRDYNRLVADETMEDYALRFTPKSFRKWSEWRISNTAVGAVSFLALEAIGGA 64 Query: 65 ITLSYGFTNAFWAIACVVLLFFLTGLPICYYAARYGVDMDLLTRGAGFGYIGSTITSLIY 124 + +SYGFTN WAI L+ FLTGLPI YYAARYGVDMDLLTRGAGFGYIGSTITSLIY Sbjct: 65 LVISYGFTNTLWAILATALVIFLTGLPISYYAARYGVDMDLLTRGAGFGYIGSTITSLIY 124 Query: 125 ASFTFIFFALEAAIMAQAIEIYFGLPLVYGYVLCSIIIIPMVAYGITLINRLQMWTQPLW 184 ASFTF+FFALEAAIMA A+E+YF +P+ Y++CSII+IP+ YG+TLI+RLQMW+QPLW Sbjct: 125 ASFTFLFFALEAAIMALALELYFHIPIALAYIICSIIVIPLAVYGVTLISRLQMWSQPLW 184 Query: 185 LVLLVLPYVCVLYKEPDALSNLMSFAGRAEEGSSFNLTLFGAAATVAFSLIAQVGEQVDF 244 L LL++PYV V++K PDAL + +SF+GR EG +F+L FGAA +VA SL+ Q+GEQVD+ Sbjct: 185 LTLLLVPYVFVIWKNPDALGDWLSFSGREGEGGTFDLLFFGAAFSVALSLVTQIGEQVDY 244 Query: 245 LRFLPQKTPANRGRWWSALLLAGPGWILLGGAKMLGGALLAFLAIQHEVPMARAVEPTQM 304 LRFLP+KT NR RWW+ALL+AGPGWI+ G K++ GA LAFLA+QHEVP+ RA EPTQM Sbjct: 245 LRFLPEKTRHNRKRWWAALLMAGPGWIIPGALKIMAGAFLAFLALQHEVPVERAAEPTQM 304 Query: 305 YLVGYQYVFGNPALALGAVVLFVVVSQIKINVTNAYAGSLAWSNFFARLTHSHPGRVVWL 364 YLV ++YVF +P AL A+ LFV++SQIKIN+TNAYAGSLAWSNFF R+THSHPGRVVWL Sbjct: 305 YLVAFRYVFSSPEWALAAMTLFVIISQIKINMTNAYAGSLAWSNFFVRVTHSHPGRVVWL 364 Query: 365 VFNVLIAVLLMELGVFNALEHVLALYSLVAISWIGAVVADLVINKPLRLSPAHIEFKRAH 424 VFNV IA++LMELGVF+A+E VL LY+ VAI+WIGA+VADLVINKP+ SP HIEFKRAH Sbjct: 365 VFNVAIALVLMELGVFDAIEQVLGLYANVAIAWIGALVADLVINKPMGWSPKHIEFKRAH 424 Query: 425 LYDVNPVGVGAMAIATLLSTLAMSGVLGKTVAAMAPFIALGTALASAPLIALATGSRYYI 484 LYD+NPVGVGAM+IA+L+S A G+ G A P I+L AL +APL+A T +YYI Sbjct: 425 LYDINPVGVGAMSIASLVSFCAHFGLFGAIAQAAPPLISLAIALVTAPLLAWLTDGKYYI 484 Query: 485 AR--RDTLAEQNYRPVTPGQAQPVLACAICGNAFETPDMAHCPAYQGAICSLCCSLDARC 542 AR DTL + P Q L C +C NAFETPDMA+CPAY+ ICSLCCSLDARC Sbjct: 485 ARTSSDTL-------LYPQGRQESLLCGLCNNAFETPDMAYCPAYRTPICSLCCSLDARC 537 Query: 543 KDRCKTPRARLPNQILHTLRQLIPARFAVKLNTRIGHYLSVFGLLAGGLAVVLWMLYFQQ 602 D+CK PRARL Q + +++P L+TR+ YL + +L G + L ++Y Q Sbjct: 538 GDQCK-PRARLSMQFEDLIGKVLPRFPRHYLHTRLAQYLGLLTILVAGSSGALALIYNQV 596 Query: 603 MADLSGSGLDAPASLRSVFIKLFCLLLVVVGVGAWWLVLTNESRAVAQEESERQTNLLLQ 662 L +A L F+K F + V GV AWW+VLT ESR VAQEESERQT+LL+Q Sbjct: 597 AHGLIDQSPEAHHLLMLAFLKAFLTVCVFAGVLAWWVVLTRESRRVAQEESERQTSLLIQ 656 Query: 663 EIEAHKQTDAELQRAKEAAESANLAKSRFVAGMSHELRTPLNSILGYAQILHVDATIPPA 722 EI+AH++TD LQ+AKEA+E+AN AKSR++ G+SHELRTPLNSILG+ QIL D T PP Sbjct: 657 EIDAHEKTDQALQKAKEASEAANAAKSRYITGLSHELRTPLNSILGFTQILQRDTTTPPH 716 Query: 723 RKDAIGVIRRSGEHLLSLIDGLLDIAKIEAGKMRLASDELALEAFLEQIVGMFAPQAEQK 782 +D + I RS HLLSLI+GLLD+AKIEAGK++L E+ + FL + MFA A++K Sbjct: 717 HQDPLATIMRSSSHLLSLINGLLDVAKIEAGKLKLEPTEILFQEFLHDLEKMFAGTAQEK 776 Query: 783 GLHFRFDKSGRLPQIVHADQKRLRQILINLLGNAVKFTDHGGVTLRLRYAREIAYFDVID 842 L FR + GR+P +V D+KR+RQILINLLGNAV FTD G V LR+ Y RE A FD++D Sbjct: 777 NLGFRLELEGRMPMVVRGDEKRVRQILINLLGNAVNFTDSGEVVLRVSYRRETAIFDIVD 836 Query: 843 TGIGIADDDRERIFLPFERSSAANLREDIGTGLGLAISRMLVHIMGGELSVQSQVGQGSS 902 +GIGIA + ERIF PFER R D G GLGL I+RML +MGG LSV S G+G+ Sbjct: 837 SGIGIAPEQIERIFQPFER--GGQTRHDNGVGLGLTITRMLTALMGGALSVSSTPGEGTH 894 Query: 903 FHLKIYLPEVHVPRPRIKLEDQMSGYAGPSRHILVVDDQASQRRLLKDMLMPLGFTVSEA 962 F ++++L EV VP+ I + + GY G R +LVVD R+++ ML PLGFTV++A Sbjct: 895 FKVRLFLSEVRVPKAVIDVNHDVVGYDGERRLVLVVDAHIEHRKVISGMLEPLGFTVAQA 954 Query: 963 DSGLACMETLGHALPDLVLLDIAMPQMDGWSVARAIPARGLAQLPILLVSANAFENLHER 1022 ++G+ + + PDL+L+D++MP MDGW+ R I + P++++SANA + Sbjct: 955 ENGMEAVRQVSLLHPDLILMDLSMPDMDGWATLRMIRRNARSDAPVIVLSANA----NAS 1010 Query: 1023 NEPPLVNDFVVKPVSYHELLGKIRQHLQLDWVAAADAPTPAAPPPAPQALMLVPTQEKLA 1082 + + +D++ KPV +LL +++ HL L+W + + P ++P +E L Sbjct: 1011 TDDDIGHDYLSKPVHLRDLLDRLKHHLNLNWQHRSRTASETKTP------WILPPREDLE 1064 Query: 1083 TLLELGSIGYAKEIVRQLDALERQDPAYLPFTTELRQLVRQFRLNEYVTRIKELI 1137 L L +GY + I +LDA+E + A F T+LR L + FRL+E +KE++ Sbjct: 1065 DLYTLCGLGYVRGIQNKLDAIETSNIASGSFVTDLRALAKGFRLDELSLHLKEML 1119 >ref|YP_547421.1| periplasmic sensor hybrid histidine kinase [Polaromonas sp. JS666] gb|ABE42523.1| periplasmic sensor hybrid histidine kinase [Polaromonas sp. JS666] Length = 1127 Score = 1254 bits (3245), Expect = 0.0, Method: Compositional matrix adjust. Identities = 637/1131 (56%), Positives = 813/1131 (71%), Gaps = 14/1131 (1%) Query: 5 ATQRIVKVRRDYNTWVANETLEDYALRYTPLSFRRWSEFRLANTALGATSFLALEAISGA 64 ATQ+I ++RR+YN WVA+E++EDYALRYTP FR+WSE+R+ NTA GA SFLALEAI GA Sbjct: 4 ATQKIFRIRREYNAWVADESIEDYALRYTPRGFRKWSEWRVGNTAFGAVSFLALEAIGGA 63 Query: 65 ITLSYGFTNAFWAIACVVLLFFLTGLPICYYAARYGVDMDLLTRGAGFGYIGSTITSLIY 124 I L+YGFTNA WAI V L+ FLTGLPI YYAARYGVDMDLLTRGAGFGY+GSTITSLIY Sbjct: 64 IALNYGFTNALWAIVLVGLITFLTGLPISYYAARYGVDMDLLTRGAGFGYLGSTITSLIY 123 Query: 125 ASFTFIFFALEAAIMAQAIEIYFGLPLVYGYVLCSIIIIPMVAYGITLINRLQMWTQPLW 184 ASFTFIFFALEAAIMA A+++Y +P+V+ YV+ +++I+P+V GITLI+RLQMWTQPLW Sbjct: 124 ASFTFIFFALEAAIMALALQMYLEIPIVWCYVISALLIVPLVVRGITLISRLQMWTQPLW 183 Query: 185 LVLLVLPYVCVLYKEPDALSNLMSFAGRAEEGSSFNLTLFGAAATVAFSLIAQVGEQVDF 244 VLL+LPY+ V +K P A S+ AGR S F+ +FGAAATVAFSL+ Q+GEQVDF Sbjct: 184 GVLLLLPYLAVFWKNPQAFSDFTGLAGRTSGSSEFDPLMFGAAATVAFSLVVQIGEQVDF 243 Query: 245 LRFLPQKTPANRGRWWSALLLAGPGWILLGGAKMLGGALLAFLAIQHEVPMARAVEPTQM 304 LRFLP+KT NR RWW+A+L+AGPGWI+ G KMLGGA LAFL +QHE+P + AVEPTQM Sbjct: 244 LRFLPEKTHLNRKRWWTAVLVAGPGWIVPGMLKMLGGAFLAFLVLQHELPASSAVEPTQM 303 Query: 305 YLVGYQYVFGNPALALGAVVLFVVVSQIKINVTNAYAGSLAWSNFFARLTHSHPGRVVWL 364 YL G+ YVF +P L A V+FVVVSQ+KIN+TNAYAGSLAWSNFFARLT+SHPGRVVWL Sbjct: 304 YLAGFAYVFTDPTWVLAATVVFVVVSQLKINLTNAYAGSLAWSNFFARLTNSHPGRVVWL 363 Query: 365 VFNVLIAVLLMELGVFNALEHVLALYSLVAISWIGAVVADLVINKPLRLSPAHIEFKRAH 424 VFNV IA+LLM LGVF+ALE VL LYS VAI+W+GA+VADLVINKPL LSP IEFKRAH Sbjct: 364 VFNVAIALLLMTLGVFSALEKVLGLYSNVAIAWVGALVADLVINKPLGLSPRGIEFKRAH 423 Query: 425 LYDVNPVGVGAMAIATLLSTLAMSGVLGKTVAAMAPFIALGTALASAPLIALATGSRYYI 484 LYD+NPVG+G+M +A +++ +A +G +G+ A +PFIALGTAL +PL+A T RYYI Sbjct: 424 LYDINPVGLGSMLLAAVVAVVAYTGAMGRQAEAFSPFIALGTALVLSPLLAWLTNGRYYI 483 Query: 485 ARRDTLAEQNYRPVTPGQAQPVLACAICGNAFETPDMAHCPAYQGAICSLCCSLDARCKD 544 AR +P G + ++ C +C N+FE DMA CPAY ICSLCC+L++RC D Sbjct: 484 AR---------QPQASGISGQMVNCHVCENSFEAEDMATCPAYGAPICSLCCTLESRCHD 534 Query: 545 RCKTPRARLPNQILHTLRQLIPARFAVKLNTRIGHYLSVFGLLAGGLAVVLWMLYFQQMA 604 RCKT R+R Q L L+P + ++N R+GH+ V L +A V+ M+Y Q+ A Sbjct: 535 RCKT-RSRAAEQAEQFLGSLLPKSLSSRVNFRVGHFTVVTLSLCALIATVMGMVYLQETA 593 Query: 605 DLSGSGLDAPASLRSVFIKLFCLLLVVVGVGAWWLVLTNESRAVAQEESERQTNLLLQEI 664 LS S DA LRS F+K+F +LL++ V +WW+VL +ESR +AQ+ES RQ LL +EI Sbjct: 594 -LSAS-TDAFDMLRSAFVKVFAVLLLIAAVCSWWVVLGSESRRMAQDESNRQNQLLSREI 651 Query: 665 EAHKQTDAELQRAKEAAESANLAKSRFVAGMSHELRTPLNSILGYAQILHVDATIPPARK 724 EAH++TDA LQ AKE AE+AN AK+R+VAGM+HELRTPLNSILGY+QIL + + Sbjct: 652 EAHQRTDAALQTAKELAEAANQAKTRYVAGMTHELRTPLNSILGYSQILLKSEALANTPR 711 Query: 725 DAIGVIRRSGEHLLSLIDGLLDIAKIEAGKMRLASDELALEAFLEQIVGMFAPQAEQKGL 784 +A+ I+RSGEHLL+L+DGLLD+A+IEAG++RL L L FL+ +V M PQAE K + Sbjct: 712 EAVQTIQRSGEHLLALVDGLLDLARIEAGRLRLEPTPLPLPDFLDGLVNMVRPQAEAKDV 771 Query: 785 HFRFDKSGRLPQIVHADQKRLRQILINLLGNAVKFTDHGGVTLRLRYAREIAYFDVIDTG 844 F + SGR+P V AD KRLRQI+INLL NAV FTD G VTL + RE+ FDV+DTG Sbjct: 772 DFIYTHSGRMPAWVQADAKRLRQIIINLLSNAVHFTDTGSVTLHVDCRREVIRFDVVDTG 831 Query: 845 IGIADDDRERIFLPFERSSAANLREDIGTGLGLAISRMLVHIMGGELSVQSQVGQGSSFH 904 IGIA D++RIFLPFER +A R + GTGLGL I+ +L +MGG+LS+QS+ G+GS+F Sbjct: 832 IGIAPQDQQRIFLPFERGAAGRRRGEPGTGLGLTITGLLTALMGGDLSLQSEQGKGSTFS 891 Query: 905 LKIYLPEVHVPRPRIKLEDQMSGYAGPSRHILVVDDQASQRRLLKDMLMPLGFTVSEADS 964 +++YL E+ P P Q++G+ G R +LVVDDQ QR++L ML PLGF V EA S Sbjct: 892 VRLYLREIDDPGPLADPPHQIAGFFGKRRTLLVVDDQPVQRQMLAGMLTPLGFEVHEAAS 951 Query: 965 GLACMETLGHALPDLVLLDIAMPQMDGWSVARAIPARGLAQLPILLVSANAFENLHERNE 1024 G+ C+++L LPD +LLDI+M MDGW A I +G +PI++VSAN FEN + Sbjct: 952 GMECIDSLKDELPDAILLDISMDDMDGWQTAAQIRDQGYDTVPIIVVSANVFENQAALLK 1011 Query: 1025 PPLVNDFVVKPVSYHELLGKIRQHLQLDWVAAADAPTPAAPPPAPQALMLVPTQEKLATL 1084 FV KPV EL+ +++HL L+W+ + P + PA + L L + A L Sbjct: 1012 AAGCQAFVGKPVLESELMDALQRHLGLEWMTSGVLPVLLSSSPAGEVLHL--PDDARAEL 1069 Query: 1085 LELGSIGYAKEIVRQLDALERQDPAYLPFTTELRQLVRQFRLNEYVTRIKE 1135 + L +G+ + R LD +DP LR V + L + + E Sbjct: 1070 IRLVRLGHVHGLHRLLDRFTAEDPTLAASCARLRGFVSRCELEALLDHLTE 1120 >ref|YP_545871.1| periplasmic sensor hybrid histidine kinase [Methylobacillus flagellatus KT] gb|ABE50030.1| periplasmic sensor hybrid histidine kinase [Methylobacillus flagellatus KT] Length = 1146 Score = 1241 bits (3210), Expect = 0.0, Method: Compositional matrix adjust. Identities = 623/1133 (54%), Positives = 796/1133 (70%), Gaps = 13/1133 (1%) Query: 6 TQRIVKVRRDYNTWVANETLEDYALRYTPLSFRRWSEFRLANTALGATSFLALEAISGAI 65 TQRIVKVRRDYNTWV NETLEDYALR+TP SFR+WS FR+ANTA GA SFL LEAI G + Sbjct: 21 TQRIVKVRRDYNTWVVNETLEDYALRFTPRSFRKWSIFRVANTAFGAISFLVLEAIGGTL 80 Query: 66 TLSYGFTNAFWAIACVVLLFFLTGLPICYYAARYGVDMDLLTRGAGFGYIGSTITSLIYA 125 ++YGFTNAFWAI + L+ F+TGLPI YYAA++G+DMDLLTRGAGFGYIGSTI+S +YA Sbjct: 81 AVNYGFTNAFWAILAIGLVIFMTGLPISYYAAKFGLDMDLLTRGAGFGYIGSTISSFVYA 140 Query: 126 SFTFIFFALEAAIMAQAIEIYFGLPLVYGYVLCSIIIIPMVAYGITLINRLQMWTQPLWL 185 SFTFI FALEAAIMA A+E+YF LPL GY++ +++I+P+V +G+TL++R+QM TQP+WL Sbjct: 141 SFTFILFALEAAIMAYALELYFDLPLYIGYLVSALVIVPLVTHGVTLVSRIQMITQPIWL 200 Query: 186 VLLVLPYVCVLYKEPDALSNLMSFAGRAEEGSSFNLTLFGAAATVAFSLIAQVGEQVDFL 245 LL LPYV ++YK+P L L FAG++ S FNL +FG A V +LI Q+GEQVDFL Sbjct: 201 FLLALPYVFIIYKDPGVLGRLGEFAGKSGYDSDFNLLMFGTAMAVGMALIPQIGEQVDFL 260 Query: 246 RFLPQKTPANRGRWWSALLLAGPGWILLGGAKMLGGALLAFLAIQHEVPMARAVEPTQMY 305 RF+P+KT NR RW +L+AGPGWI LG KMLGGALLA+LA++ +AV P QMY Sbjct: 261 RFMPEKTRKNRFRWHLGVLVAGPGWISLGMLKMLGGALLAYLAVEGARSFEQAVNPNQMY 320 Query: 306 LVGYQYVFGNPALALGAVVLFVVVSQIKINVTNAYAGSLAWSNFFARLTHSHPGRVVWLV 365 + G+ VF NP + L V FVV+SQIK+N+TNAYAGSLAWSNFFARLTHSHPGRVVW+V Sbjct: 321 MAGFSQVFSNPEVVLAVTVFFVVISQIKVNMTNAYAGSLAWSNFFARLTHSHPGRVVWVV 380 Query: 366 FNVLIAVLLMELGVFNALEHVLALYSLVAISWIGAVVADLVINKPLRLSPAHIEFKRAHL 425 FN +IA++LME+ VF ALE VL LYS +AISWI AVVADLVINKPL LSP IEF+RA+L Sbjct: 381 FNAMIAIILMEMDVFQALEQVLGLYSNIAISWITAVVADLVINKPLGLSPKGIEFRRAYL 440 Query: 426 YDVNPVGVGAMAIATLLSTLAMSGVLGKTVAAMAPFIALGTALASAPLIALATGSRYYIA 485 YD+NPVGVGAM IA+LLS A G+ G A + IALGTAL +PLIA T +YYIA Sbjct: 441 YDINPVGVGAMVIASLLSVAAFFGMFGVEAEAFSALIALGTALVVSPLIAWLTKGKYYIA 500 Query: 486 RRDTLAEQNYRPVTPGQAQPVLACAICGNAFETPDMAHCPAYQGAICSLCCSLDARCKDR 545 R RPV+ A V C+IC +E DMAHCPAYQGAICSLCCSLDARC D Sbjct: 501 R---------RPVSYQPASGVQRCSICEKQYEVEDMAHCPAYQGAICSLCCSLDARCNDL 551 Query: 546 CKTPRARLPNQILHTLRQLIPARFAVKLNTRIGHYLSVFGLLAGGLAVVLWMLYFQQMAD 605 CK P R+ Q +R+++P R+ + + +GHYL + + L+ + ++YF + Sbjct: 552 CK-PHGRIEYQWQRVMRRVLPDRWVEVMQSGLGHYLLLMAVTLAFLSALFGLIYFHESLT 610 Query: 606 LSGSGLDAPASLRSVFIKLFCLLLVVVGVGAWWLVLTNESRAVAQEESERQTNLLLQEIE 665 +G LR ++K+F L V G+ AWW+VLT+ESR VAQEES RQTNLL +EI Sbjct: 611 FTGEKEALLPELRLGYLKVFAALAFVSGIIAWWIVLTSESRRVAQEESNRQTNLLQREIV 670 Query: 666 AHKQTDAELQRAKEAAESANLAKSRFVAGMSHELRTPLNSILGYAQILHVDATIPPARKD 725 HKQTDAELQRA++ AE AN AKSR++ G+SHELRTPLNSILGYAQ+L D +IP R+ Sbjct: 671 LHKQTDAELQRARQVAEQANQAKSRYITGISHELRTPLNSILGYAQLLDNDPSIPENRRQ 730 Query: 726 AIGVIRRSGEHLLSLIDGLLDIAKIEAGKMRLASDELALEAFLEQIVGMFAPQAEQKGLH 785 +I VIRRSGEHLLSLI+G LDIA+IE+GK+ + F++Q+V MF QA KG+ Sbjct: 731 SIRVIRRSGEHLLSLIEGTLDIARIESGKLTFDLRLVRFPEFIQQLVSMFELQARNKGID 790 Query: 786 FRFDKSGRLPQIVHADQKRLRQILINLLGNAVKFTDHGGVTLRLRYAREIAYFDVIDTGI 845 F+++ G LP++V DQKRL QILIN+LGNAVKFT HGGV+ +LRYARE+ + + DTG Sbjct: 791 FKYELRGELPKVVRIDQKRLSQILINILGNAVKFTRHGGVSFKLRYAREMLHISIEDTGP 850 Query: 846 GIADDDRERIFLPFERSSAANLREDIGTGLGLAISRMLVHIMGGELSVQSQVGQGSSFHL 905 GIA ++ E++F PF R SAA GTGLGL IS+ML +MGG+L+V+S +GQGS F++ Sbjct: 851 GIAPEEIEKVFEPFARGSAAAKSNIGGTGLGLTISKMLTELMGGQLTVRSTLGQGSQFNI 910 Query: 906 KIYLPEVHVPRPRIKLEDQMS-GYAGPSRHILVVDDQASQRRLLKDMLMPLGFTVSEADS 964 +++L +V VP M Y G R ILVVD++ R LLK++L PLGF V+EA + Sbjct: 911 RLFLSQVRVPEEIENASMPMPLAYKGQRRRILVVDNEQVDRELLKNILQPLGFEVAEAAN 970 Query: 965 GLACMETLGHALPDLVLLDIAMPQMDGWSVARAIPARGLAQLPILLVSANAFENLHERNE 1024 G C++T P+++L+D+AMP MDGW + I + +PI +VSANAF+ E Sbjct: 971 GRECLQTYVKFKPNVILMDLAMPDMDGWEASYMIRKVHQSDVPIAIVSANAFDKGLENTA 1030 Query: 1025 PPLVNDFVVKPVSYHELLGKIRQHLQLDWVAA-ADAPTPAAPPPAPQALMLVPTQEKLAT 1083 +DF+VKPV+ ELL I + L+L+WV A D A + P +E+ Sbjct: 1031 GIPASDFIVKPVNVMELLRWIGEQLKLEWVTALGDVVDVDAVSRPVTGELEAPPREQRDE 1090 Query: 1084 LLELGSIGYAKEIVRQLDALERQDPAYLPFTTELRQLVRQFRLNEYVTRIKEL 1136 L+ L +GY + I R+LD + QD Y F +RQL QF L ++E+ Sbjct: 1091 LMALIKVGYMRGITRKLDEIG-QDGQYETFIAAMRQLAGQFELEAMQKMLEEV 1142