BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.0071.p (317 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776047.1| cobalamin biosynthesis CobD/CbiB [Herbaspiri... 597 e-168 ref|YP_001099277.1| putative cobalamin biosynthesis protein [Her... 387 e-105 ref|YP_001352788.1| cobalamin biosynthesis protein CobD [Janthin... 381 e-103 gb|EGW62505.1| cobalamin biosynthesis protein CobD [Dechlorosoma... 333 2e-89 ref|YP_004227277.1| cobalamin biosynthesis protein CobD [Burkhol... 330 1e-88 ref|YP_158212.1| cobalamin biosynthesis protein [Aromatoleum aro... 329 4e-88 ref|YP_003906140.1| cobalamin biosynthesis protein CobD [Burkhol... 327 2e-87 ref|ZP_03270781.1| cobalamin biosynthesis protein CobD [Burkhold... 325 5e-87 ref|YP_283369.1| cobalamin biosynthesis protein [Dechloromonas a... 324 1e-86 ref|YP_002982146.1| cobalamin biosynthesis protein [Ralstonia pi... 324 2e-86 >ref|YP_003776047.1| cobalamin biosynthesis CobD/CbiB [Herbaspirillum seropedicae SmR1] gb|ADJ64139.1| cobalamin biosynthesis (CobD/CbiB) protein [Herbaspirillum seropedicae SmR1] Length = 317 Score = 597 bits (1538), Expect = e-168, Method: Compositional matrix adjust. Identities = 313/317 (98%), Positives = 313/317 (98%) Query: 1 MLIGLSWPWLAVLMALGLALDLRLGEARRWHPLVGFGRLAQRIEAALNRAPGLRLRGVLA 60 MLIGLSWPWLAVLMALGLALDLRLGEARRWHPLVGFGRLAQRIEAALNRAPGLRLRGVLA Sbjct: 1 MLIGLSWPWLAVLMALGLALDLRLGEARRWHPLVGFGRLAQRIEAALNRAPGLRLRGVLA 60 Query: 61 WALAVLPLVLLAAWLIAQTPWWLAALLHAGLLYFCIGLRSLREHTLPIAQALAAGELEQA 120 WALAVLP VLLAAWLIAQTPWWLAALLHAGLLYFCIGLRSLREHTLPIAQAL AGEL QA Sbjct: 61 WALAVLPPVLLAAWLIAQTPWWLAALLHAGLLYFCIGLRSLREHTLPIAQALGAGELAQA 120 Query: 121 RRLTAWIVSRDTRSASEQELAKAGVESLLENGNDAVFGTLFWFLLAGGPGALLFRLSNTL 180 RRLTAWIVSRDTRSASEQELAKAGVESLLENGNDAVFGTLFWFLLAGGPGALLFRLSNTL Sbjct: 121 RRLTAWIVSRDTRSASEQELAKAGVESLLENGNDAVFGTLFWFLLAGGPGALLFRLSNTL 180 Query: 181 DAMWGYRNVRFLYFGWAAARIDDALNWCPARLTALSYAVLGQRRQALACWKEQAPAWSSP 240 DAMWGYRN RFLYFGWAAARIDDALNWCPARLTALSYAVLGQRRQALACWKEQAPAWSSP Sbjct: 181 DAMWGYRNARFLYFGWAAARIDDALNWCPARLTALSYAVLGQRRQALACWKEQAPAWSSP 240 Query: 241 NAGPVMAAGAGALGLALGGAAVYDGEVEQRPPLGCGVAPQGADIVRAWRLVAMSAALWMA 300 NAGPVMAAGAGALGLALGGAAVYDGEVEQRPPLGCGVAPQGADIVRAWRLVAMSAALWMA Sbjct: 241 NAGPVMAAGAGALGLALGGAAVYDGEVEQRPPLGCGVAPQGADIVRAWRLVAMSAALWMA 300 Query: 301 VVAAVALPWLLGGALHA 317 VVAAVALPWLLGGALHA Sbjct: 301 VVAAVALPWLLGGALHA 317 >ref|YP_001099277.1| putative cobalamin biosynthesis protein [Herminiimonas arsenicoxydans] emb|CAL61150.1| putative cobalamin biosynthesis protein CbiB [Herminiimonas arsenicoxydans] Length = 304 Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust. Identities = 208/308 (67%), Positives = 237/308 (76%), Gaps = 8/308 (2%) Query: 14 MALGLALDLRLGEARRWHPLVGFGRLAQRIEAALNRAPGLRLRGVLAWALAVLPLVLLAA 73 M LG+ LD+RLGEA RWHPLVGFG LA RIE LN +RG +AW L VLPLVL+A Sbjct: 1 MMLGVLLDMRLGEATRWHPLVGFGNLAIRIEKKLNTGGSRIVRGAVAWMLIVLPLVLVA- 59 Query: 74 WLI----AQTPWWLAALLHAGLLYFCIGLRSLREHTLPIAQALAAGELEQARRLTAWIVS 129 WL+ AQ LA +HA LLYF +GLRSLR+HTLPIA AL G+L QAR LTA IVS Sbjct: 60 WLLTFWLAQFDLLLAFGVHALLLYFGLGLRSLRDHTLPIAHALMDGDLSQARLLTARIVS 119 Query: 130 RDTRSASEQELAKAGVESLLENGNDAVFGTLFWFLLAGGPGALLFRLSNTLDAMWGYRNV 189 RDT A E +LAKAGVESLLENGNDAVFGTLFWF+LAGGPG +LFR +NTLDAMWGYR Sbjct: 120 RDTTQAQEADLAKAGVESLLENGNDAVFGTLFWFVLAGGPGVVLFRFANTLDAMWGYRTQ 179 Query: 190 RFLYFGWAAARIDDALNWCPARLTALSYAVLGQRRQALACWKEQAPAWSSPNAGPVMAAG 249 RF FG AARIDD LN+ PARLTALSYAVLG +QA CW+ QAPAWSSPNAGPVM+AG Sbjct: 180 RFNEFGRVAARIDDVLNFIPARLTALSYAVLGNAKQAWQCWRVQAPAWSSPNAGPVMSAG 239 Query: 250 AGALGLALGGAAVYDGEVEQRPPLGCGVAPQGADIVRAWRLVAMSAALWMAVVAAVALPW 309 AGALG++LGGAA+YDGEVEQRPPLG G A G DI RAWRLV ++ LW+A++ A Sbjct: 240 AGALGISLGGAAIYDGEVEQRPPLGIGPAAAGKDIARAWRLVVLTTVLWLALICIAA--- 296 Query: 310 LLGGALHA 317 ++ G +HA Sbjct: 297 VIAGVVHA 304 >ref|YP_001352788.1| cobalamin biosynthesis protein CobD [Janthinobacterium sp. Marseille] gb|ABR88542.1| cobalamin biosynthesis protein CobD [Janthinobacterium sp. Marseille] Length = 313 Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust. Identities = 205/306 (66%), Positives = 231/306 (75%), Gaps = 5/306 (1%) Query: 1 MLIGLSWPWLAVLMALGLALDLRLGEARRWHPLVGFGRLAQRIEAALNRAPGLRLRGVLA 60 ML GLS +A+LM LG+ LD+RLGEA RWHPLVGFG LA RIE N RG LA Sbjct: 1 MLFGLSCGAIAILMLLGVLLDMRLGEATRWHPLVGFGNLAIRIEKKFNTGGSRIARGALA 60 Query: 61 WALAVLPLVLLAAWL----IAQTPWWLAALLHAGLLYFCIGLRSLREHTLPIAQALAAGE 116 W L V P V +A WL +AQ A +HA LLYF +GLRSLR+HTLPIA AL G+ Sbjct: 61 WILVVAPFVAVA-WLLTFWVAQFDALFALGVHALLLYFSLGLRSLRDHTLPIAHALMDGD 119 Query: 117 LEQARRLTAWIVSRDTRSASEQELAKAGVESLLENGNDAVFGTLFWFLLAGGPGALLFRL 176 L QAR LTA IVSRDT A E +LAKAGVESLLENGNDAVFGTLFWF +AGGPG +LFRL Sbjct: 120 LAQARLLTARIVSRDTTQAQEADLAKAGVESLLENGNDAVFGTLFWFAVAGGPGVVLFRL 179 Query: 177 SNTLDAMWGYRNVRFLYFGWAAARIDDALNWCPARLTALSYAVLGQRRQALACWKEQAPA 236 +NTLDAMWGYR RF FG AARIDD LN+ PARLTALSYAVLG RQA CW+ QAPA Sbjct: 180 ANTLDAMWGYRTQRFNEFGRVAARIDDVLNFIPARLTALSYAVLGNTRQAWRCWRAQAPA 239 Query: 237 WSSPNAGPVMAAGAGALGLALGGAAVYDGEVEQRPPLGCGVAPQGADIVRAWRLVAMSAA 296 WSSPNAGPVM+AGAGALG++LGGAA+YDGE+EQRPPLG G G DI RAWRLV ++ Sbjct: 240 WSSPNAGPVMSAGAGALGISLGGAAIYDGELEQRPPLGSGPLAAGKDIARAWRLVRLTTV 299 Query: 297 LWMAVV 302 LW+ ++ Sbjct: 300 LWLLLI 305 >gb|EGW62505.1| cobalamin biosynthesis protein CobD [Dechlorosoma suillum PS] Length = 323 Score = 333 bits (854), Expect = 2e-89, Method: Compositional matrix adjust. Identities = 196/324 (60%), Positives = 225/324 (69%), Gaps = 15/324 (4%) Query: 6 SWPWLAVLMALGLALDLRLGEARRWHPLVGFGRLAQRIEAALNRAPG------LRLRGVL 59 SW L + LG+ LD LGE RR HPLV FG LA +E AL P LR+ G+L Sbjct: 3 SWLALPLAALLGVGLDRLLGEPRRGHPLVAFGALANLLEKALRPPPAVASRSALRIFGLL 62 Query: 60 AWALAVLPLVLLAAWLIAQTPWWLAALLHAGLLYFCIGLRSLREHTLPIAQALAAGELEQ 119 AW+ AVLP VLLAAW A TPW L L AGLLYF +G RSL+EH +A LA G+L Sbjct: 63 AWSFAVLPPVLLAAWASA-TPW-LGILADAGLLYFALGARSLKEHADAVAVPLAGGDLAT 120 Query: 120 ARRLTAWIVSRDTRSASEQELAKAGVESLLENGNDAVFGTLFWFLLAGGPGALLFRLSNT 179 AR+ ++VSRDT + E +AKA VES+LENGNDAVFGTLFWF L GGPGALLFRL+NT Sbjct: 121 ARQKVGYMVSRDTTALDESGVAKACVESVLENGNDAVFGTLFWFALLGGPGALLFRLANT 180 Query: 180 LDAMWGYRNVRFLYFGWAAARIDDALNWCPARLTALSYAVLGQRRQALACWKEQAPAWSS 239 LDAMWGY+N RFL+FGWAAAR+DD LNW ARLTAL+YA LG R+ALACWK QAP W S Sbjct: 181 LDAMWGYKNERFLHFGWAAARLDDLLNWPAARLTALTYAWLGNTRRALACWKAQAPTWES 240 Query: 240 PNAGPVMAAGAGALGLALGGAAVYDGEVEQRPPLGCGVAPQGADIVRAWRLVAMSAALWM 299 PNAGPVMAAGAG+LG+ LGGAA+Y G EQRPPLG G DI RA LV LW+ Sbjct: 241 PNAGPVMAAGAGSLGVLLGGAAIYHGREEQRPPLGEGRPAAAFDIDRASHLVQRGLVLWL 300 Query: 300 AVVAAVALP------WLLGGALHA 317 A + A+ LP +LLG HA Sbjct: 301 AAIVAL-LPLIALVQFLLGKVFHA 323 >ref|YP_004227277.1| cobalamin biosynthesis protein CobD [Burkholderia sp. CCGE1001] gb|ADX54217.1| cobalamin biosynthesis protein CobD [Burkholderia sp. CCGE1001] Length = 311 Score = 330 bits (847), Expect = 1e-88, Method: Compositional matrix adjust. Identities = 177/294 (60%), Positives = 212/294 (72%) Query: 5 LSWPWLAVLMALGLALDLRLGEARRWHPLVGFGRLAQRIEAALNRAPGLRLRGVLAWALA 64 LS P + L G+A+D +GE R HPLVGFG+ A R+EA NR LRL+G+LAWALA Sbjct: 2 LSLPLIVTLATAGVAVDRWIGEPRGAHPLVGFGKWAARLEAHYNRGRRLRLKGLLAWALA 61 Query: 65 VLPLVLLAAWLIAQTPWWLAALLHAGLLYFCIGLRSLREHTLPIAQALAAGELEQARRLT 124 VLP VL A+WL+A P++ A +H LL+F +G RSL +H PIAQALA +L QAR LT Sbjct: 62 VLPPVLAASWLVAVLPFFAACAVHVALLWFALGARSLHDHIEPIAQALAQRDLAQARLLT 121 Query: 125 AWIVSRDTRSASEQELAKAGVESLLENGNDAVFGTLFWFLLAGGPGALLFRLSNTLDAMW 184 + IVSR+T A E L++A VES LENGNDA+FG LFWF +AGGPGAL FRL+NTLDAMW Sbjct: 122 SRIVSRETAHADEAALSRAAVESALENGNDAIFGALFWFAIAGGPGALGFRLANTLDAMW 181 Query: 185 GYRNVRFLYFGWAAARIDDALNWCPARLTALSYAVLGQRRQALACWKEQAPAWSSPNAGP 244 GYR R+L FGWAAAR+DD LNW PARLTA SYA+LG R A CW+EQAP W SPNAGP Sbjct: 182 GYRTPRYLRFGWAAARLDDVLNWIPARLTAASYALLGDTRTAWRCWREQAPRWDSPNAGP 241 Query: 245 VMAAGAGALGLALGGAAVYDGEVEQRPPLGCGVAPQGADIVRAWRLVAMSAALW 298 VMA+GAG+L + +GG AVY G +E RP LG G + A I A LV + LW Sbjct: 242 VMASGAGSLNVLIGGPAVYHGALEHRPTLGFGHPAKAAHITAALMLVERTVILW 295 >ref|YP_158212.1| cobalamin biosynthesis protein [Aromatoleum aromaticum EbN1] emb|CAI07311.1| cobalamin biosynthesis protein [Aromatoleum aromaticum EbN1] Length = 340 Score = 329 bits (843), Expect = 4e-88, Method: Compositional matrix adjust. Identities = 189/317 (59%), Positives = 218/317 (68%), Gaps = 9/317 (2%) Query: 7 WPWLAVLMA--LGLALDLRLGEARRWHPLVGFGRLAQRIEAALNRAPGLRLR----GVLA 60 W WL + + + + LD GE RR+HPLVGFGRLAQRIEAAL R P R G+ A Sbjct: 27 WQWLQLPLCALVAVGLDRVFGEPRRFHPLVGFGRLAQRIEAALRRFPTRHNRQKKAGIAA 86 Query: 61 WALAVLPLVLLAAWLIAQTPWWLAALLHAGLLYFCIGLRSLREHTLPIAQALAAGELEQA 120 W LAVLP A WL P WLA L LLYF +G +SLREH +PIA AL A +L A Sbjct: 87 WMLAVLPCAGGALWLRHIAPAWLAVSLDVVLLYFALGAQSLREHVMPIADALDADDLPAA 146 Query: 121 RRLTAWIVSRDTRSASEQELAKAGVESLLENGNDAVFGTLFWFLLAGGPGALLFRLSNTL 180 R IVSRDT + E +A+A VES LENG+DAVFG LFWF L GGPGALLFRL+NTL Sbjct: 147 REAVGRIVSRDTTALDETAVARAAVESTLENGSDAVFGALFWFALLGGPGALLFRLANTL 206 Query: 181 DAMWGYRNVRFLYFGWAAARIDDALNWCPARLTALSYAVLGQRRQALACWKEQAPAWSSP 240 DAMWGYRN R+L+FG AAAR+DD L + PAR AL+YAVLG+ QALACW+ QAP W SP Sbjct: 207 DAMWGYRNERYLHFGRAAARLDDLLGYLPARFCALTYAVLGRGGQALACWRVQAPLWDSP 266 Query: 241 NAGPVMAAGAGALGLALGGAAVYDGEVEQRPPLGCGVAPQGADIVRAWRLVAMSAALWMA 300 NAGPVMAAGAG+LG++LGGAAVY G+ E RP LG G AP ADI RA LV +W+ Sbjct: 267 NAGPVMAAGAGSLGVSLGGAAVYHGQPETRPMLGAGAAPTAADIRRALALVRRGIGVWL- 325 Query: 301 VVAAVALPWLLGGALHA 317 A LP L+ GA HA Sbjct: 326 --IAGFLPALVWGAFHA 340 >ref|YP_003906140.1| cobalamin biosynthesis protein CobD [Burkholderia sp. CCGE1003] gb|ADN56849.1| cobalamin biosynthesis protein CobD [Burkholderia sp. CCGE1003] Length = 311 Score = 327 bits (837), Expect = 2e-87, Method: Compositional matrix adjust. Identities = 176/294 (59%), Positives = 211/294 (71%) Query: 5 LSWPWLAVLMALGLALDLRLGEARRWHPLVGFGRLAQRIEAALNRAPGLRLRGVLAWALA 64 L+ P + L G+A+D LGE R HPLVGFG+ A R+EA NR LRL+G+LAWALA Sbjct: 2 LTLPLIVTLATAGVAVDRWLGEPRGAHPLVGFGKWAARLEAHYNRGRRLRLKGLLAWALA 61 Query: 65 VLPLVLLAAWLIAQTPWWLAALLHAGLLYFCIGLRSLREHTLPIAQALAAGELEQARRLT 124 VLP VL+A WL+A P++ A +H LL+F +G RSL +H PIA+AL +L QAR LT Sbjct: 62 VLPPVLVAWWLVAVLPFFAACAVHVALLWFALGARSLHDHIEPIAKALGKRDLAQARLLT 121 Query: 125 AWIVSRDTRSASEQELAKAGVESLLENGNDAVFGTLFWFLLAGGPGALLFRLSNTLDAMW 184 A IVSR+T A E L++A VES LENGNDA+FG LFWF +AGGPGAL FRL+NTLDAMW Sbjct: 122 ARIVSRETAHADEAALSRAAVESALENGNDAIFGALFWFAIAGGPGALGFRLANTLDAMW 181 Query: 185 GYRNVRFLYFGWAAARIDDALNWCPARLTALSYAVLGQRRQALACWKEQAPAWSSPNAGP 244 GYR R+L FGWAAAR+DD LNW PARLTA SYA+LG R AL CW+EQA W SPNAGP Sbjct: 182 GYRTPRYLRFGWAAARLDDVLNWVPARLTAASYALLGDTRTALRCWREQASRWDSPNAGP 241 Query: 245 VMAAGAGALGLALGGAAVYDGEVEQRPPLGCGVAPQGADIVRAWRLVAMSAALW 298 VMA+GAG+L + +GG AVY G +E RP LG G + A I A LV + LW Sbjct: 242 VMASGAGSLNVLIGGPAVYHGALEHRPTLGFGHPAKTAHITAALMLVERTMILW 295 >ref|ZP_03270781.1| cobalamin biosynthesis protein CobD [Burkholderia sp. H160] gb|EDZ97632.1| cobalamin biosynthesis protein CobD [Burkholderia sp. H160] Length = 313 Score = 325 bits (833), Expect = 5e-87, Method: Compositional matrix adjust. Identities = 178/294 (60%), Positives = 207/294 (70%) Query: 5 LSWPWLAVLMALGLALDLRLGEARRWHPLVGFGRLAQRIEAALNRAPGLRLRGVLAWALA 64 L+ P +A L G+A+D GE R HPLVGFG A RIEA N LRL+G+ AWALA Sbjct: 4 LTMPLIAALATAGVAVDRWFGEPSRAHPLVGFGNWAARIEARFNHDRRLRLKGLFAWALA 63 Query: 65 VLPLVLLAAWLIAQTPWWLAALLHAGLLYFCIGLRSLREHTLPIAQALAAGELEQARRLT 124 VLP VL+A WL+A P + A LH LL+F +G RSLR+H PIA+AL +L AR+LT Sbjct: 64 VLPPVLIAWWLVAVLPLFAACALHVALLWFALGARSLRDHIAPIARALGQHDLATARQLT 123 Query: 125 AWIVSRDTRSASEQELAKAGVESLLENGNDAVFGTLFWFLLAGGPGALLFRLSNTLDAMW 184 A IVSRDT + E LA+A VES LENGNDA+FG LFWF LAGGPGAL FRL+NTLDAMW Sbjct: 124 ARIVSRDTAQSDEAALARAAVESALENGNDAIFGALFWFALAGGPGALGFRLANTLDAMW 183 Query: 185 GYRNVRFLYFGWAAARIDDALNWCPARLTALSYAVLGQRRQALACWKEQAPAWSSPNAGP 244 GYR R+L FGWAAARIDD LNW PARLTA SYA+LG A CW+EQAP W SPNAGP Sbjct: 184 GYRTPRYLRFGWAAARIDDVLNWIPARLTATSYALLGDTLTAWRCWREQAPRWDSPNAGP 243 Query: 245 VMAAGAGALGLALGGAAVYDGEVEQRPPLGCGVAPQGADIVRAWRLVAMSAALW 298 VMAAGAG+L + +GG AVY G +EQRP LG G + + A LV + LW Sbjct: 244 VMAAGAGSLNVLIGGPAVYHGTLEQRPTLGFGHPAEARHVGAALMLVERTVILW 297 >ref|YP_283369.1| cobalamin biosynthesis protein [Dechloromonas aromatica RCB] gb|AAZ44899.1| adenosylcobinamide-phosphate synthase [Dechloromonas aromatica RCB] Length = 304 Score = 324 bits (830), Expect = 1e-86, Method: Compositional matrix adjust. Identities = 180/290 (62%), Positives = 211/290 (72%), Gaps = 10/290 (3%) Query: 20 LDLRLGEARRWHPLVGFGRLAQRIEAALNRAPGLRL-RGVLAWALAVLPLVLLAAWLIAQ 78 LD LGE RR+HPLVGFG LA IE LN RL G+ AWALAVLP V LA WL+ Sbjct: 20 LDRLLGEVRRFHPLVGFGNLAAAIEKRLNNH---RLASGLFAWALAVLPFVGLA-WLVRP 75 Query: 79 -TPWWLAALLHAGLLYFCIGLRSLREHTLPIAQALAAGELEQARRLTAWIVSRDTRSASE 137 TP + +L LYF +G +SL EH IA+ L G L++AR+ +WIVSR+T + E Sbjct: 76 VTPLTVDVVL----LYFALGAQSLCEHAEAIAKPLREGHLDEARQRVSWIVSRETSTLDE 131 Query: 138 QELAKAGVESLLENGNDAVFGTLFWFLLAGGPGALLFRLSNTLDAMWGYRNVRFLYFGWA 197 +AKAGVES+LENGNDA+FGTLFWF L GGPGALLFRL+NTLDAMWGYR RF FG Sbjct: 132 SGIAKAGVESILENGNDAIFGTLFWFALLGGPGALLFRLANTLDAMWGYRTERFNLFGRF 191 Query: 198 AARIDDALNWCPARLTALSYAVLGQRRQALACWKEQAPAWSSPNAGPVMAAGAGALGLAL 257 AAR DDALNW PARLTAL+YA+LGQ R ALACW+ QAP W SPNAGPVM+AGAG+LG+ L Sbjct: 192 AARFDDALNWVPARLTALTYALLGQTRNALACWRTQAPGWDSPNAGPVMSAGAGSLGVQL 251 Query: 258 GGAAVYDGEVEQRPPLGCGVAPQGADIVRAWRLVAMSAALWMAVVAAVAL 307 GGAA+Y G+VE RPPLG G P AD+ RA L+ S LW+AV+ A+ L Sbjct: 252 GGAAIYHGQVESRPPLGSGPPPAAADLGRAISLIRHSLWLWLAVLFAIGL 301 >ref|YP_002982146.1| cobalamin biosynthesis protein [Ralstonia pickettii 12D] gb|ACS63474.1| cobalamin biosynthesis protein CobD [Ralstonia pickettii 12D] Length = 326 Score = 324 bits (830), Expect = 2e-86, Method: Compositional matrix adjust. Identities = 176/300 (58%), Positives = 208/300 (69%), Gaps = 7/300 (2%) Query: 2 LIGLSWPWLAVLMALGLALDLRLGEARRWHPLVGFGRLAQRIEAALNRAPGL----RLRG 57 + L WP + + G+ LD GE RWHPLVGFGRLA+ IE +NRAP RL G Sbjct: 8 VFDLGWPLVTLAALAGVLLDRLFGEVPRWHPLVGFGRLAKAIERWMNRAPAAVSWSRLVG 67 Query: 58 VLAWALAVLPLVLLAAWLIA---QTPWWLAALLHAGLLYFCIGLRSLREHTLPIAQALAA 114 V+AWA+AVLPLVLLA WL+ WL A L A LYF IG RSL EH PIA AL Sbjct: 68 VVAWAIAVLPLVLLAGWLVGVARDVSPWLVAALDAVALYFAIGARSLHEHIAPIALALRD 127 Query: 115 GELEQARRLTAWIVSRDTRSASEQELAKAGVESLLENGNDAVFGTLFWFLLAGGPGALLF 174 ++ +AR L + IVSRD A+++ +A+A VES LENG+DA+F LFW ++AG PG +L+ Sbjct: 128 ADVPRARALASRIVSRDLTQATDEPIARAAVESALENGSDAIFAPLFWLVVAGAPGVVLY 187 Query: 175 RLSNTLDAMWGYRNVRFLYFGWAAARIDDALNWCPARLTALSYAVLGQRRQALACWKEQA 234 RL+NTLDAMWGYRN RF FGWAAARIDD LNW PARLTA+SYA+LG AL CW+ QA Sbjct: 188 RLANTLDAMWGYRNARFTGFGWAAARIDDVLNWIPARLTAISYALLGHTADALNCWRTQA 247 Query: 235 PAWSSPNAGPVMAAGAGALGLALGGAAVYDGEVEQRPPLGCGVAPQGADIVRAWRLVAMS 294 P WSSPNAGPVMAAGAG+L + LGGAA YDG E RP LG G ADI RA LV+ + Sbjct: 248 PQWSSPNAGPVMAAGAGSLRVQLGGAARYDGVEEARPSLGTGETATAADIARALTLVSRT 307