BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.0051.p         (214 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003776065.1| hypothetical protein Hsero_2661 [Herbaspiril...   422   e-116
ref|ZP_02468708.1| hypothetical protein Bpse38_35442 [Burkholder...    86   3e-15

>ref|YP_003776065.1| hypothetical protein Hsero_2661 [Herbaspirillum seropedicae SmR1]
 gb|ADJ64157.1| conserved hypothetical protein [Herbaspirillum seropedicae SmR1]
          Length = 214

 Score =  422 bits (1086), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 212/214 (99%), Positives = 213/214 (99%)

Query: 1   MLYLLVRAHPPASAAAAEGRCEVMCESIAVGSLAGRDAMVVYLSPLEADIDAAWNARGGG 60
           MLYLLVRAHPPASAAAAEGRCEVMCESIAVGSLAGRDAMVVYLSPLEADIDAAWNAR GG
Sbjct: 1   MLYLLVRAHPPASAAAAEGRCEVMCESIAVGSLAGRDAMVVYLSPLEADIDAAWNARSGG 60

Query: 61  HYQVLAVHDFLPDELLRQHRDSLPYCLHIGWGARDGRLAVRRDGGLVRVSAAALAWVSAD 120
           HYQVLAVHDFLPDELLRQHRDSLPYCLHIGWGARDGRLAVRRDGGLVRVSAAALAWVSAD
Sbjct: 61  HYQVLAVHDFLPDELLRQHRDSLPYCLHIGWGARDGRLAVRRDGGLVRVSAAALAWVSAD 120

Query: 121 VEAVRLVVEPFQLESRSRLWEGAGLYAHAEVEAKALACTEPEQRRHAQRAIVRLPGTVAA 180
           VEAVRLVVEPFQLESRSRLWEGAGLYAHAEVEAKALACTEPE+RRHAQRAIVRLPGTVAA
Sbjct: 121 VEAVRLVVEPFQLESRSRLWEGAGLYAHAEVEAKALACTEPERRRHAQRAIVRLPGTVAA 180

Query: 181 PPGINQLALYDLESAHWHFVPLSLAQQILSQQED 214
           PPGINQLALYDLESAHWHFVPLSLAQQILSQQED
Sbjct: 181 PPGINQLALYDLESAHWHFVPLSLAQQILSQQED 214


>ref|ZP_02468708.1| hypothetical protein Bpse38_35442 [Burkholderia thailandensis
           MSMB43]
          Length = 182

 Score = 85.9 bits (211), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 54/174 (31%), Positives = 84/174 (48%), Gaps = 2/174 (1%)

Query: 35  GRDAMVVYLSPLEADIDAAWNARGGGHYQVLAVHDFLPDELLRQHRDSLPYCLHIGWGAR 94
           G DA+  YLSP++A +DA + ++ G  Y  +    F+P   +  +   L   +H+GW AR
Sbjct: 8   GGDAICAYLSPVDAMLDAIFASKQGKRYYAIPASGFVPTTFIDDNNGRLALDVHLGWPAR 67

Query: 95  DGRLAVRRDGGLVRV-SAAALAWVSADVEAVRLVVEPFQLESRSRLWEGAGLYAHAEVEA 153
           +G+L  RR+G  V   S   +  +      +   +E   L     L+  AGL+A+ E   
Sbjct: 68  NGQLIARRNGKPVSCASHHEMQVLPEHAHHIAFRLEQGTLAVLDELYMSAGLFAYRESFN 127

Query: 154 KALACTEPEQRRHAQRAIVRLPGTVAAPPGINQLALYDLESAHWHFV-PLSLAQ 206
             +   E  + R    A+ ++ G   A    NQ+ALYD E   WHFV P  LA+
Sbjct: 128 TMMGWPETRRNRAVTAAVQKMGGLAPAESEYNQMALYDAEFEQWHFVSPAPLAK 181