BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.0049.p (545 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776066.1| methyl-accepting chemotaxis I protein [Herba... 1010 0.0 ref|ZP_08402704.1| methyl-accepting chemotaxis I protein [Rubriv... 394 e-107 ref|YP_051730.1| methyl-accepting chemotaxis protein [Pectobacte... 362 1e-97 ref|YP_003019016.1| methyl-accepting chemotaxis sensory transduc... 359 6e-97 ref|YP_003260961.1| methyl-accepting chemotaxis sensory transduc... 357 3e-96 ref|YP_003776428.1| methyl-accepting chemotaxis transducer trans... 348 2e-93 ref|YP_001019783.1| methyl-accepting chemotaxis sensory transduc... 347 3e-93 ref|YP_003331958.1| methyl-accepting chemotaxis sensory transduc... 344 2e-92 ref|ZP_08403726.1| methyl-accepting chemotaxis sensory transduce... 340 3e-91 ref|YP_522265.1| methyl-accepting chemotaxis sensory transducer ... 339 7e-91 >ref|YP_003776066.1| methyl-accepting chemotaxis I protein [Herbaspirillum seropedicae SmR1] gb|ADJ64158.1| methyl-accepting chemotaxis I protein [Herbaspirillum seropedicae SmR1] Length = 517 Score = 1010 bits (2612), Expect = 0.0, Method: Compositional matrix adjust. Identities = 517/517 (100%), Positives = 517/517 (100%) Query: 1 MSLLNRLTVGRRLALGFVVIIGLMLAMLLAMLAQLKQVEQANQILQKEQAERLSLAKEWR 60 MSLLNRLTVGRRLALGFVVIIGLMLAMLLAMLAQLKQVEQANQILQKEQAERLSLAKEWR Sbjct: 1 MSLLNRLTVGRRLALGFVVIIGLMLAMLLAMLAQLKQVEQANQILQKEQAERLSLAKEWR 60 Query: 61 ENIVVNVARALALGVTANETLLKFFADDMAGLVTRTTVIQKRYAELDDTEEGKTILERMA 120 ENIVVNVARALALGVTANETLLKFFADDMAGLVTRTTVIQKRYAELDDTEEGKTILERMA Sbjct: 61 ENIVVNVARALALGVTANETLLKFFADDMAGLVTRTTVIQKRYAELDDTEEGKTILERMA 120 Query: 121 KERKRYLVVRQQMEEVGADAATRQQLVQDMKSISAAYIKEGTSLVQYQERRTAELGGQID 180 KERKRYLVVRQQMEEVGADAATRQQLVQDMKSISAAYIKEGTSLVQYQERRTAELGGQID Sbjct: 121 KERKRYLVVRQQMEEVGADAATRQQLVQDMKSISAAYIKEGTSLVQYQERRTAELGGQID 180 Query: 181 AAIDRSRFVLMGATAASILLAVLLGWLLTQSIAAPLHEMQALTLQIAAGDLTSTVPAATG 240 AAIDRSRFVLMGATAASILLAVLLGWLLTQSIAAPLHEMQALTLQIAAGDLTSTVPAATG Sbjct: 181 AAIDRSRFVLMGATAASILLAVLLGWLLTQSIAAPLHEMQALTLQIAAGDLTSTVPAATG 240 Query: 241 RSELASLLKNVGSMQESLRSLVSKSRQAALSVNQASSEAAAGNADLSARTEQAASSLEQT 300 RSELASLLKNVGSMQESLRSLVSKSRQAALSVNQASSEAAAGNADLSARTEQAASSLEQT Sbjct: 241 RSELASLLKNVGSMQESLRSLVSKSRQAALSVNQASSEAAAGNADLSARTEQAASSLEQT 300 Query: 301 ASAMEEIAATAQQSAEFARSANAQVAQASGVAQHGGQVMGDVVQTMGRIDESSRRIADII 360 ASAMEEIAATAQQSAEFARSANAQVAQASGVAQHGGQVMGDVVQTMGRIDESSRRIADII Sbjct: 301 ASAMEEIAATAQQSAEFARSANAQVAQASGVAQHGGQVMGDVVQTMGRIDESSRRIADII 360 Query: 361 GVIDSIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRTLAQRSATAAREIKELINASL 420 GVIDSIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRTLAQRSATAAREIKELINASL Sbjct: 361 GVIDSIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRTLAQRSATAAREIKELINASL 420 Query: 421 AAVDGGMSLVGDAGKIIQDVVQNVELVRGTISEISVAAEEQSRGIAEVNIAISNMEQTTQ 480 AAVDGGMSLVGDAGKIIQDVVQNVELVRGTISEISVAAEEQSRGIAEVNIAISNMEQTTQ Sbjct: 421 AAVDGGMSLVGDAGKIIQDVVQNVELVRGTISEISVAAEEQSRGIAEVNIAISNMEQTTQ 480 Query: 481 QNASLVEQTTAATMQLNQQAVLLAEVISGFKLPAQYQ 517 QNASLVEQTTAATMQLNQQAVLLAEVISGFKLPAQYQ Sbjct: 481 QNASLVEQTTAATMQLNQQAVLLAEVISGFKLPAQYQ 517 >ref|ZP_08402704.1| methyl-accepting chemotaxis I protein [Rubrivivax benzoatilyticus JA2] gb|EGJ11037.1| methyl-accepting chemotaxis I protein [Rubrivivax benzoatilyticus JA2] Length = 501 Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust. Identities = 231/501 (46%), Positives = 324/501 (64%) Query: 13 LALGFVVIIGLMLAMLLAMLAQLKQVEQANQILQKEQAERLSLAKEWRENIVVNVARALA 72 +ALGF +++ LML +L A+LA + + E+AN L QAERL+LA EW +NI VN RALA Sbjct: 1 MALGFGIVVALMLIVLAAVLALIARAERANDELVGAQAERLALAHEWHQNIQVNSQRALA 60 Query: 73 LGVTANETLLKFFADDMAGLVTRTTVIQKRYAELDDTEEGKTILERMAKERKRYLVVRQQ 132 +G+T + L + F + M + RTT IQKRYAEL+ ++ G+ +E +A R+RYL R+ Sbjct: 61 IGLTRDAGLERAFGERMKAVTERTTQIQKRYAELETSDGGRAGIEALAVARQRYLDQRKA 120 Query: 133 MEEVGADAATRQQLVQDMKSISAAYIKEGTSLVQYQERRTAELGGQIDAAIDRSRFVLMG 192 + D A R + + ++AAYI ++ +Q++R E+ Q A++ R + Sbjct: 121 LLAAVDDTARRAEEGARFEQVTAAYIDVSAQVLAFQQQRQREISVQARTAMEELRGTAIV 180 Query: 193 ATAASILLAVLLGWLLTQSIAAPLHEMQALTLQIAAGDLTSTVPAATGRSELASLLKNVG 252 + +I+ AV +GW LT+ I PL +QA +IA GDL + G++E L + + Sbjct: 181 VSILAIVAAVAMGWTLTRGITRPLATLQAAARRIAGGDLAQPLERGAGQAETVLLSEEIA 240 Query: 253 SMQESLRSLVSKSRQAALSVNQASSEAAAGNADLSARTEQAASSLEQTASAMEEIAATAQ 312 +MQ++LR+LV + + A S+ AS E AAGNADLSARTE+ ASSLE TAS M+ + T + Sbjct: 241 NMQQALRTLVGQVHEVAESIEVASHEVAAGNADLSARTERTASSLEATASTMQSLTETVR 300 Query: 313 QSAEFARSANAQVAQASGVAQHGGQVMGDVVQTMGRIDESSRRIADIIGVIDSIAFQTNI 372 ++AE AR A A VA+ GG V+ D+V++M I+ SSRR+A+II ID IAFQTNI Sbjct: 301 RTAESARDAERLAHSAGDVARSGGGVVTDLVRSMAEIERSSRRVAEIIATIDGIAFQTNI 360 Query: 373 LALNAAVEAARAGEQGRGFAVVASEVRTLAQRSATAAREIKELINASLAAVDGGMSLVGD 432 LALNAAVEAARAG+QGRGFAVVA EVR LAQRSA AAREIK LI+ S+ V+ G GD Sbjct: 361 LALNAAVEAARAGDQGRGFAVVAGEVRLLAQRSADAAREIKRLIDQSVTEVEAGTRRAGD 420 Query: 433 AGKIIQDVVQNVELVRGTISEISVAAEEQSRGIAEVNIAISNMEQTTQQNASLVEQTTAA 492 AG+ ++++V V+ V + IS QS I VN+A+ +EQ+TQQNA+LVEQ+TAA Sbjct: 421 AGRSMEEIVAAVQRVGEVVDGISATTAAQSESIGGVNVAVVQIEQSTQQNAALVEQSTAA 480 Query: 493 TMQLNQQAVLLAEVISGFKLP 513 L +QA L ++ GF+L Sbjct: 481 AASLREQAHRLTTLVGGFRLA 501 >ref|YP_051730.1| methyl-accepting chemotaxis protein [Pectobacterium atrosepticum SCRI1043] emb|CAG76540.1| methyl-accepting chemotaxis protein [Pectobacterium atrosepticum SCRI1043] Length = 551 Score = 362 bits (928), Expect = 1e-97, Method: Compositional matrix adjust. Identities = 233/524 (44%), Positives = 336/524 (64%), Gaps = 6/524 (1%) Query: 4 LNRLTVGRRLALGFVVIIGLMLAMLLAMLAQLKQVEQANQILQKEQAERLSLAKEWRENI 63 + +G RLA GF ++I L LAML + + QL QV + Q + +E + LA +W + Sbjct: 1 MKNYKIGTRLAGGFGLLIALSLAMLTSGIYQLNQVSSSTQQMMQEPLRKERLASDWHATL 60 Query: 64 VVNVARALALGVTANETLLKFFADDMAGLVTRTTVIQKRYAELDDTEEGKTILERMAKER 123 V V R++A+ + +++L++ FA + + Q+ +A L T E K + +++ + R Sbjct: 61 VAGVQRSMAVARSNDDSLVELFAAENTRASKESGKRQEDFASLISTPEEKALFDKVGEYR 120 Query: 124 KRYLVVRQQM-EEVGADAATRQQLVQDMKSISAA--YIKEGTSLVQYQERRTAELGGQID 180 + Y+ R + E GA R + + D + + A+ Y+ +L +Q ++G I+ Sbjct: 121 QSYIKKRDAIITEKGAGNFDRARTLFDNEFVPASNGYLASVEALRDHQRASIDQMGKNIN 180 Query: 181 AAIDRSRFVLMGATAASILLAVLLGWLLTQSIAAPLHEMQALTLQIAAGDLTSTVPAATG 240 A R +L S ++ VL+ W+LT+SI PL + T +AAGDLT + G Sbjct: 181 AGASRGDLILAVTGVLSAIIGVLIAWVLTRSIVQPLARAVSATQAVAAGDLTHNIQP-EG 239 Query: 241 RSELASLLKNVGSMQESLRSLVSKSRQAALSVNQASSEAAAGNADLSARTEQAASSLEQT 300 R E A LL + M LRS+V + RQ + S+ ASS+ AAGN DLS+RTE+ AS+L++T Sbjct: 240 RDEAAQLLHALQDMTVRLRSIVGEVRQGSESIAGASSQLAAGNIDLSSRTEEQASALQET 299 Query: 301 ASAMEEIAATAQQSAEFARSANAQVAQASGV-AQHGGQVMGDVVQTMGRIDESSRRIADI 359 A+++E++++T +Q+A+ AR AN Q+AQ++ AQ GGQ++ +VV+TMG ID SS++I DI Sbjct: 300 AASIEQLSSTVRQNADNARQAN-QLAQSTTQQAQSGGQLVTEVVETMGAIDSSSKKIVDI 358 Query: 360 IGVIDSIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRTLAQRSATAAREIKELINAS 419 IGVIDSIAFQTNILALNAAVEAARAGEQGRGFAVVASEVR+LAQRSA+AA+EIKELI+ S Sbjct: 359 IGVIDSIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRSLAQRSASAAKEIKELIDRS 418 Query: 420 LAAVDGGMSLVGDAGKIIQDVVQNVELVRGTISEISVAAEEQSRGIAEVNIAISNMEQTT 479 + V+ G LV AG IQD+V V V + EIS A+ EQ+ GI +VN+A++ ME TT Sbjct: 419 VQTVEAGNRLVVQAGVSIQDIVNGVRKVSDLVGEISSASNEQTMGIEQVNVAVNQMEVTT 478 Query: 480 QQNASLVEQTTAATMQLNQQAVLLAEVISGFKLPAQYQ*SSHPA 523 QQNASLV + +AAT L QQA LAE +S F+L +Q + PA Sbjct: 479 QQNASLVNEASAATQSLQQQAAQLAETVSQFRLGNGHQIARTPA 522 >ref|YP_003019016.1| methyl-accepting chemotaxis sensory transducer [Pectobacterium carotovorum subsp. carotovorum PC1] gb|ACT14480.1| methyl-accepting chemotaxis sensory transducer [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 551 Score = 359 bits (922), Expect = 6e-97, Method: Compositional matrix adjust. Identities = 237/537 (44%), Positives = 340/537 (63%), Gaps = 14/537 (2%) Query: 4 LNRLTVGRRLALGFVVIIGLMLAMLLAMLAQLKQVEQANQILQKEQAERLSLAKEWRENI 63 + +G RLA GF ++I L LAML + + QL QV + + + +E + LA +W + Sbjct: 1 MKNYKIGTRLAGGFGLLIALSLAMLTSGIYQLNQVSSSTKQMMQEPLRKERLASDWHATL 60 Query: 64 VVNVARALALGVTANETLLKFFADDMAGLVTRTTVIQKRYAELDDTEEGKTILERMAKER 123 V V R++A+ + +++L++ FA + + Q+++A L T E K + +++ + R Sbjct: 61 VAGVQRSMAVARSNDDSLVELFAAENTRASKESGKRQEQFASLISTPEEKALFDKVGEYR 120 Query: 124 KRYLVVRQQM-EEVGADAATRQQLVQDMKSISAA--YIKEGTSLVQYQERRTAELGGQID 180 + Y+ R + E GA R + + D + + A+ Y+ +L +Q ++G I+ Sbjct: 121 QSYIKKRDAIIAEKGAGNFDRARSLFDNEFVPASNGYLASVEALRDHQRASIDQMGQDIN 180 Query: 181 AAIDRSRFVLMGATAASILLAVLLGWLLTQSIAAPLHEMQALTLQIAAGDLTSTVPAATG 240 R +L A S ++ VL+ W+LT+SI PL T +AAGDLT V G Sbjct: 181 TGASRGDLILAVTGALSAIIGVLIAWVLTRSIVQPLARAVRATQAVAAGDLTHNVQP-EG 239 Query: 241 RSELASLLKNVGSMQESLRSLVSKSRQAALSVNQASSEAAAGNADLSARTEQAASSLEQT 300 R E A LL + M LR++V + RQ + S+ ASS+ AAGN DLS+RTE+ AS+L++T Sbjct: 240 RDEAAQLLHALQDMTVRLRTIVGEVRQGSESIAGASSQLAAGNIDLSSRTEEQASALQET 299 Query: 301 ASAMEEIAATAQQSAEFARSANAQVAQASGV-AQHGGQVMGDVVQTMGRIDESSRRIADI 359 A+++E++++T +Q+A+ AR AN Q+AQ++ AQ GGQ++ +VV+TMG ID SS++I DI Sbjct: 300 AASIEQLSSTVRQNADNARQAN-QLAQSTTQQAQSGGQLVTEVVETMGAIDSSSKKIVDI 358 Query: 360 IGVIDSIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRTLAQRSATAAREIKELINAS 419 IGVIDSIAFQTNILALNAAVEAARAGEQGRGFAVVASEVR+LAQRSA+AA+EIKELI+ S Sbjct: 359 IGVIDSIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRSLAQRSASAAKEIKELIDRS 418 Query: 420 LAAVDGGMSLVGDAGKIIQDVVQNVELVRGTISEISVAAEEQSRGIAEVNIAISNMEQTT 479 + V+ G LV AG IQD+V V V + EIS A+ EQ+ GI +VN+A++ ME TT Sbjct: 419 VQTVEAGNRLVVQAGASIQDIVNGVRKVSDLVGEISSASNEQTMGIEQVNVAVNQMEVTT 478 Query: 480 QQNASLVEQTTAATMQLNQQAVLLAEVISGFKLPAQYQ*SSHPAIRQPAIPSGLPSL 536 QQNASLV + +AAT L QQA LAE +S F+L +SH R PA PSL Sbjct: 479 QQNASLVNEASAATQSLQQQAAQLAETVSQFRLG-----NSHQIARTPA---AAPSL 527 >ref|YP_003260961.1| methyl-accepting chemotaxis sensory transducer [Pectobacterium wasabiae WPP163] gb|ACX89354.1| methyl-accepting chemotaxis sensory transducer [Pectobacterium wasabiae WPP163] Length = 551 Score = 357 bits (916), Expect = 3e-96, Method: Compositional matrix adjust. Identities = 235/533 (44%), Positives = 336/533 (63%), Gaps = 12/533 (2%) Query: 4 LNRLTVGRRLALGFVVIIGLMLAMLLAMLAQLKQVEQANQILQKEQAERLSLAKEWRENI 63 + +G RLA GF ++I L L ML + + QL QV Q Q + +E + LA +W + Sbjct: 1 MKNYKIGTRLASGFGLLIALSLVMLTSGIYQLNQVSQRTQEMMQEPLRKERLAADWHATL 60 Query: 64 VVNVARALALGVTANETLLKFFADDMAGLVTRTTVIQKRYAELDDTEEGKTILERMAKER 123 V V R++A+ + +++L++ FA + + Q+ +A L T E K + +++ + R Sbjct: 61 VAGVQRSMAVARSNDDSLVELFAAENTRASKESAKRQEDFASLISTPEEKALFDKVGEYR 120 Query: 124 KRYLVVRQQM-EEVGADAATRQQLVQDMKSISAA--YIKEGTSLVQYQERRTAELGGQID 180 + Y+ R + E GA R + + D + + A+ Y+ +L +Q ++G I+ Sbjct: 121 QSYIKKRDAIITEKGAGNFDRARTLFDNEFVPASNGYLTSVEALRDHQRASIDQMGQDIN 180 Query: 181 AAIDRSRFVLMGATAASILLAVLLGWLLTQSIAAPLHEMQALTLQIAAGDLTSTVPAATG 240 A R +L S ++ VL+ W+LT+SI PL T +AAGDLT + G Sbjct: 181 AGASRGDLILAVTGVLSAIIGVLIAWVLTRSIVQPLSRAVQATQAVAAGDLTHNIQP-EG 239 Query: 241 RSELASLLKNVGSMQESLRSLVSKSRQAALSVNQASSEAAAGNADLSARTEQAASSLEQT 300 R E A LL + M LRS+V + RQ + S+ ASS+ AAGN DLS+RTE+ AS+L++T Sbjct: 240 RDEAAQLLHALQDMTVRLRSIVGEVRQGSESIAGASSQLAAGNIDLSSRTEEQASALQET 299 Query: 301 ASAMEEIAATAQQSAEFARSANAQVAQASGV-AQHGGQVMGDVVQTMGRIDESSRRIADI 359 A+++E++++T +Q+A+ AR AN Q+AQ++ AQ GGQ++ +VV+TMG ID SS++I DI Sbjct: 300 AASIEQLSSTVRQNADNARQAN-QLAQSTTQQAQSGGQLVTEVVKTMGAIDSSSKKIVDI 358 Query: 360 IGVIDSIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRTLAQRSATAAREIKELINAS 419 IGVIDSIAFQTNILALNAAVEAARAGEQGRGFAVVASEVR+LAQRSA+AA+EIKELI+ S Sbjct: 359 IGVIDSIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRSLAQRSASAAKEIKELIDRS 418 Query: 420 LAAVDGGMSLVGDAGKIIQDVVQNVELVRGTISEISVAAEEQSRGIAEVNIAISNMEQTT 479 + V+ G LV AG IQD+V V V + EIS A+ EQ+ GI +VN+A++ ME TT Sbjct: 419 VQTVEAGNRLVVQAGASIQDIVSGVRKVSDLVGEISSASNEQTMGIEQVNVAVNQMEVTT 478 Query: 480 QQNASLVEQTTAATMQLNQQAVLLAEVISGFKLPAQYQ*SSHPAIRQP-AIPS 531 QQNASLV + +AAT L QQA L E +S F+L +SH R P A P+ Sbjct: 479 QQNASLVNEASAATQSLQQQAAQLTETVSQFRLD-----NSHQIARTPVATPT 526 >ref|YP_003776428.1| methyl-accepting chemotaxis transducer transmembrane protein [Herbaspirillum seropedicae SmR1] gb|ADJ64520.1| methyl-accepting chemotaxis transducer transmembrane protein [Herbaspirillum seropedicae SmR1] Length = 536 Score = 348 bits (892), Expect = 2e-93, Method: Compositional matrix adjust. Identities = 227/541 (41%), Positives = 325/541 (60%), Gaps = 17/541 (3%) Query: 1 MSLLNRLTVGRRLALGFVVIIGLMLAMLLAMLAQLKQVEQANQILQKEQAERLSLAKEWR 60 M+++ + +GRRL LGF +I+ + + L +L V QA + + E + L +W Sbjct: 1 MNIIGNMNIGRRLTLGFALILTFSIIIAGIGLWRLDHVAQATREMMAEPLKTERLMADWY 60 Query: 61 ENIVVNVARALALGVTANETLLKFFADDMAGLVTRTTVIQKRYAELDDTEEGKTILERMA 120 N+V + R +A+ +++ L +FA ++A + QK+ L T E K + +++ Sbjct: 61 TNLVAGIRRTIAIAKSSDPALGPYFAAEVAASSKSSGEYQKQVEALLSTPEEKALFQKIG 120 Query: 121 KERKRYLVVRQQMEEVGADAATRQQ---LVQDMKSISAAYIKEGTSLVQYQERRTAELGG 177 + RK YL R ++ + A T + L Q + AY LV +Q + + Sbjct: 121 ELRKLYLSSRDEINKAKAAGNTEEAMRILDQVFVPNATAYQDTMRKLVDFQRKEMDDTAR 180 Query: 178 QIDAAIDRSRFVLMGATAASILLAVLLGWLLTQSIAAPLHEMQALTLQIAAGDLTSTVPA 237 +IDA +SR +++ +LL ++ LT I PLH ++ +A GDL+S + A Sbjct: 181 EIDAIAAKSRTLILVLEGLILLLGIVFARYLTLGITKPLHRAVDVSRCVAEGDLSSEI-A 239 Query: 238 ATGRSELASLLKNVGSMQESLRSLVSKSRQAALSVNQASSEAAAGNADLSARTEQAASSL 297 T R E LL+++ M +SLR +VS R +++ ASSE AAGN DLS+RTEQ ASSL Sbjct: 240 VTSRDETGQLLQSLKDMNQSLRGIVSNVRSGTDTISTASSEIAAGNLDLSSRTEQQASSL 299 Query: 298 EQTASAMEEIAATAQQSAEFARSANAQVAQASGVAQHGGQVMGDVVQTMGRIDESSRRIA 357 +TASAMEE+ +T +Q+A+ AR A+ AS VA+ GG V+ VV TMG I+ SSR+I Sbjct: 300 AETASAMEELISTVRQNADNARQASQLANSASAVAEQGGGVVSQVVDTMGAINASSRKIV 359 Query: 358 DIIGVIDSIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRTLAQRSATAAREIKELIN 417 DII VID IAFQTNILALNAAVEAARAGEQGRGFAVVASEVRTLAQRSA+AA+EIKELIN Sbjct: 360 DIISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRTLAQRSASAAKEIKELIN 419 Query: 418 ASLAAVDGGMSLVGDAGKIIQDVVQNVELVRGTISEISVAAEEQSRGIAEVNIAISNMEQ 477 S+ VD G LV AG +Q+VV +V V ++EIS A+ EQ+ GI ++N+AI+ M+Q Sbjct: 420 DSVGKVDDGSRLVEQAGNTMQEVVSSVRRVTDIVAEISAASTEQTHGIEQINLAITQMDQ 479 Query: 478 TTQQNASLVEQTTAATMQLNQQAVLLAEVISGFKLPAQYQ*SSHPAIRQ--------PAI 529 TQQNA+LVE+ AA + QA L +++S F+L + P +R+ P + Sbjct: 480 VTQQNAALVEEAAAAAASMQTQAGRLMQMVSVFRLSER-----EPLVRREIDVTPSSPVL 534 Query: 530 P 530 P Sbjct: 535 P 535 >ref|YP_001019783.1| methyl-accepting chemotaxis sensory transducer [Methylibium petroleiphilum PM1] gb|ABM93548.1| methyl-accepting chemotaxis sensory transducer [Methylibium petroleiphilum PM1] Length = 584 Score = 347 bits (891), Expect = 3e-93, Method: Compositional matrix adjust. Identities = 230/538 (42%), Positives = 327/538 (60%), Gaps = 13/538 (2%) Query: 4 LNRLTVGRRLALGFVVIIGLMLAMLLAMLAQLKQVEQA-NQILQKEQAERLSLAKEWREN 62 L++L +G RL GF ++ L++ +++ ++L E+ + L E R++ A EW+ Sbjct: 3 LDQLKIGARLGAGFGTVLLLLVLIVMLSFSRLVMTERGFDSALDVEH--RVARADEWKNL 60 Query: 63 IVVNVARALALGVTAN-ETLLKFFADDMAGLVTRTTVIQKRY-AELDDTEEGKTILERMA 120 +NV+R +A+ + + F M + T +QK AEL E K + ++ Sbjct: 61 TTLNVSRTIAIVKSGGLPQMSAFLTPQMKDTSEQITRVQKELEAELSH-ERSKALFADIS 119 Query: 121 KERKRYLVVRQQ---MEEVGADAATRQQLVQDMKSISAAYIKEGTSLVQYQERRTAELGG 177 +RK Y+ R+ + + G A L + + S Y+ ++ + Sbjct: 120 GKRKAYIDQREAALALLKAGDVTAVELLLEKSLLPASKVYLAAIEDFSNFERELAVQSAA 179 Query: 178 QIDAAIDRSRFVLMGATAASILLAVLLGWLLTQSIAAPLHEMQALTLQIAAGDLTSTVPA 237 + A + RS+ +L+ SI+L L W+LT+S+ APL A T IAAGDL+ + A Sbjct: 180 AVKADVQRSKLMLLVLAGVSIVLGSLSAWVLTRSVTAPLRRAAASTQAIAAGDLSQPIEA 239 Query: 238 ATGRSELASLLKNVGSMQESLRSLVSKSRQAALSVNQASSEAAAGNADLSARTEQAASSL 297 TGR E+A L +++G MQ SLR +VS R + S+ ASSE A GN DLSARTEQ AS+L Sbjct: 240 -TGRDEVADLQRSLGKMQTSLRDMVSAVRLSTDSITTASSEIATGNQDLSARTEQTASNL 298 Query: 298 EQTASAMEEIAATAQQSAEFARSANAQVAQASGVAQHGGQVMGDVVQTMGRIDESSRRIA 357 ++TAS+ME++ T +Q+AE AR+AN + A A GGQV+ VV TM I+ SS++IA Sbjct: 299 QETASSMEQLTGTVKQTAESARTANQLASSAQATAAKGGQVVSQVVSTMDDINASSKKIA 358 Query: 358 DIIGVIDSIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRTLAQRSATAAREIKELIN 417 DIIGVID IAFQTNILALNAAVEAARAGEQGRGFAVVA EVR LAQRSA AA+EIK+LI Sbjct: 359 DIIGVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRNLAQRSAQAAKEIKDLIG 418 Query: 418 ASLAAVDGGMSLVGDAGKIIQDVVQNVELVRGTISEISVAAEEQSRGIAEVNIAISNMEQ 477 AS+ V+ G LV DAG+ + ++V +V+ V I EI+ AA EQS GI +VN A++N++Q Sbjct: 419 ASVERVESGSKLVADAGRTMSEIVGSVQRVSDIICEITAAAAEQSDGIGQVNTAVTNLDQ 478 Query: 478 TTQQNASLVEQTTAATMQLNQQAVLLAEVISGFKLPAQYQ*SSHPAIRQPAIPSGLPS 535 TQQNA+LVE++ AA L QA+ LA +S F++ A S PA P++P+ PS Sbjct: 479 MTQQNAALVEESAAAAESLKDQAIRLAASVSVFRVDAHAT-VSRPAAATPSLPA--PS 533 >ref|YP_003331958.1| methyl-accepting chemotaxis sensory transducer [Dickeya dadantii Ech586] gb|ACZ75253.1| methyl-accepting chemotaxis sensory transducer [Dickeya dadantii Ech586] Length = 559 Score = 344 bits (883), Expect = 2e-92, Method: Compositional matrix adjust. Identities = 228/542 (42%), Positives = 324/542 (59%), Gaps = 17/542 (3%) Query: 4 LNRLTVGRRLALGFVVIIGLMLAMLLAMLAQLKQV-EQANQI----LQKEQAERLSLAKE 58 + +G RL++GF ++I L ML + + QL Q+ A QI L+KE+ L + Sbjct: 1 MKNYKIGTRLSVGFGILIAFSLIMLASGIYQLNQITRNAEQIMLVPLRKER-----LVAD 55 Query: 59 WRENIVVNVARALALGVTANETLLKFFADDMAGLVTRTTVIQKRYAELDDTEEGKTILER 118 W + + R A +++ +L + FA D A ++ EL ++E + +L++ Sbjct: 56 WAATLAAGIQRTTATARSSDPSLAQVFAADNANATKENNERVAKFTELVSSKEEQGLLDQ 115 Query: 119 MAKERKRYLVVRQQM---EEVGADAATRQQLVQDMKSISAAYIKEGTSLVQYQERRTAEL 175 + +R+ Y+ R ++ + G +Q Q + +S Y K + L YQ + Sbjct: 116 LNADRQAYIKARDEIFSAKASGNAEQAKQVFEQRLLPVSVQYQKSMSILRDYQRTNIDRM 175 Query: 176 GGQIDAAIDRSRFVLMGATAASI-LLAVLLGWLLTQSIAAPLHEMQALTLQIAAGDLTST 234 +I A +S ++ +G I L+ LL W+LT+SI PL +T +A GDLT+ Sbjct: 176 REEISARA-QSSYLFLGVLGLMITLIGSLLAWMLTRSIVRPLQTAVQVTNAVARGDLTAE 234 Query: 235 VPAATGRSELASLLKNVGSMQESLRSLVSKSRQAALSVNQASSEAAAGNADLSARTEQAA 294 + + GR ELA L + M LR++V + R+ A ++ ASS+ +AGN DLS RT++ + Sbjct: 235 I-SPQGRDELAQLQHALREMTGQLRTVVGEVREGAEAIAGASSQLSAGNQDLSGRTDEQS 293 Query: 295 SSLEQTASAMEEIAATAQQSAEFARSANAQVAQASGVAQHGGQVMGDVVQTMGRIDESSR 354 S+L++TA+++E++ +T +Q+A+ AR AN + AQ GGQ++ +VVQTMG ID SS+ Sbjct: 294 SALQETAASIEQLTSTVRQNADNARQANQLAQDTASQAQSGGQLVSEVVQTMGAIDSSSK 353 Query: 355 RIADIIGVIDSIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRTLAQRSATAAREIKE 414 +I DIIGVIDSIAFQTNILALNAAVEAARAGEQGRGFAVVASEVR LAQRSA+AAREIKE Sbjct: 354 KIVDIIGVIDSIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRNLAQRSASAAREIKE 413 Query: 415 LINASLAAVDGGMSLVGDAGKIIQDVVQNVELVRGTISEISVAAEEQSRGIAEVNIAISN 474 LI S+ VD G LV AG IQ +V V V + EISVA++EQS GI +VN AI+ Sbjct: 414 LIGHSVETVDAGNRLVEKAGVSIQGIVDGVRKVSELVGEISVASQEQSLGIEQVNQAINK 473 Query: 475 MEQTTQQNASLVEQTTAATMQLNQQAVLLAEVISGFKLPAQYQ*SSHPAIRQPAI-PSGL 533 MEQTT QNASLV + AT L QQA L +V+S F L S + A +P I PS Sbjct: 474 MEQTTLQNASLVREGYNATQSLQQQAEQLKQVVSIFHLEEARGGSYNLAGNRPMISPSSA 533 Query: 534 PS 535 P+ Sbjct: 534 PA 535 >ref|ZP_08403726.1| methyl-accepting chemotaxis sensory transducer [Rubrivivax benzoatilyticus JA2] gb|EGJ12059.1| methyl-accepting chemotaxis sensory transducer [Rubrivivax benzoatilyticus JA2] Length = 519 Score = 340 bits (873), Expect = 3e-91, Method: Compositional matrix adjust. Identities = 223/515 (43%), Positives = 315/515 (61%), Gaps = 7/515 (1%) Query: 3 LLNRLTVGRRLALGFVVIIGLMLAMLLAMLAQLKQVE-QANQILQKEQA-ERLSLAKEWR 60 +L RL++GRR+A+ I+ L L +A + L+ ++ + + +L K ER S A W Sbjct: 1 MLQRLSIGRRMAVVLAAILTLSLVSAIASVLMLRTLQGELDTMLNKRLVVERASAA--WL 58 Query: 61 ENIVVNVARALALGVTANETLLKFFADDMAGLVTRTTVIQKRYAELDDTEEGKTILERMA 120 I V RA A+ +++ +L+++FA + +QK+ + D++E + +R+ Sbjct: 59 LRINAGVQRASAIAKSSDPSLVEYFAAVSVQSSKESGELQKKIGDSLDSDEEHALFDRIG 118 Query: 121 KERKRYLVVRQQ---MEEVGADAATRQQLVQDMKSISAAYIKEGTSLVQYQERRTAELGG 177 + RK+YL R + +++ G +A + + + +S + LV+ Q+ Sbjct: 119 EARKQYLSARDEVSKLKKAGDEAGAAKVFSERFEPVSNEFTASVQKLVELQQANLDAAAA 178 Query: 178 QIDAAIDRSRFVLMGATAASILLAVLLGWLLTQSIAAPLHEMQALTLQIAAGDLTSTVPA 237 +++A R+ L+GA+ +LL L W LTQSI P+ E + IAA DL+ T + Sbjct: 179 RVEALRARTVQSLVGASVVGLLLGAFLAWRLTQSIVRPVVEAERAAEAIAAMDLSGTARS 238 Query: 238 ATGRSELASLLKNVGSMQESLRSLVSKSRQAALSVNQASSEAAAGNADLSARTEQAASSL 297 E LL+ V SM+E+LR V + R AA + AS + A GN DLS RTE AS+L Sbjct: 239 HYPNDETGRLLRAVDSMREALRRTVQQVRGAADGIATASEQIATGNQDLSQRTEHTASNL 298 Query: 298 EQTASAMEEIAATAQQSAEFARSANAQVAQASGVAQHGGQVMGDVVQTMGRIDESSRRIA 357 +QTASAME++ T + SA+ A AN A+ VA+ GGQV+G VV TM I SS RIA Sbjct: 299 QQTASAMEQLTGTVKSSADSAAQANQLAGSAADVARRGGQVVGQVVATMDEISASSHRIA 358 Query: 358 DIIGVIDSIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRTLAQRSATAAREIKELIN 417 DIIG ID IAFQTNILALNAAVEAARAGEQGRGFAVVA EVRTLAQRSA AAREIK LI Sbjct: 359 DIIGTIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRTLAQRSAEAAREIKALIG 418 Query: 418 ASLAAVDGGMSLVGDAGKIIQDVVQNVELVRGTISEISVAAEEQSRGIAEVNIAISNMEQ 477 S+ V+ G LVG+AG + ++V +V+ V I EIS A+ EQS+GIA+VN +++ ++Q Sbjct: 419 TSVEKVESGSRLVGEAGSTMTEIVASVQRVTDIIGEISAASHEQSQGIAQVNGSVNELDQ 478 Query: 478 TTQQNASLVEQTTAATMQLNQQAVLLAEVISGFKL 512 TQQNA+LVE+ TAA L QQA LAE++S F+L Sbjct: 479 MTQQNAALVEEATAAAGSLRQQAGQLAELVSTFRL 513 >ref|YP_522265.1| methyl-accepting chemotaxis sensory transducer [Rhodoferax ferrireducens T118] gb|ABD68734.1| methyl-accepting chemotaxis sensory transducer [Rhodoferax ferrireducens T118] Length = 542 Score = 339 bits (870), Expect = 7e-91, Method: Compositional matrix adjust. Identities = 233/547 (42%), Positives = 330/547 (60%), Gaps = 16/547 (2%) Query: 4 LNRLTVGRRLALGFVVIIGLMLAMLLAMLAQLKQVEQANQILQKEQAERLSLAKEWRENI 63 +N L + RLALGF VII + L + ++ V +A+ +++ AE L LA W+ ++ Sbjct: 1 MNNLKISTRLALGFAVIIAVFLLLAGVTAWRVNMVSEASTRMERS-AELLQLAGNWQGDV 59 Query: 64 VVNVARALALGVTANETLLKFFADDMAGLVTRTTVIQKRY-AELDDTEEGKTILERMAKE 122 N AR+LA+G + T+L FF + MA TT QK + A++ D+E K E + + Sbjct: 60 RQNSARSLAVGYSEGGTMLDFFKEAMAATTRGTTETQKAFLAKVQDSESRKRA-ENVGEV 118 Query: 123 RKRYLVVRQQ---MEEVGADAATRQQLVQDMKSISAAYIKEGTSLVQYQERRTAELGGQI 179 RK ++ R Q ++ G DA R + + I+ YI+ +LV + ++ Sbjct: 119 RKTWIATRDQVNVLKAAGDDAGGRALVEKKFLPITDDYIRATQALVDGEAAHVHAAQQEV 178 Query: 180 DAAIDRSRFVLMGATAASILLA--VLLGWLLTQSIAAPLHEMQALTLQIAAGDLTSTVPA 237 + L+GA + LA V +GW L++SI++ + + +I GDL+ + A Sbjct: 179 KEMFQQ--LYLLGAVLLVLTLAAAVFIGWRLSRSISSRVDAARLAAQRIGEGDLSQPLSA 236 Query: 238 ATGRSELASLLKNVGSMQESLRSLVSKSRQAALSVNQASSEAAAGNADLSARTEQAASSL 297 A G+ E+ LL+ + +MQ++L +VS RQ + SV AS+E A GN DLSARTE AS+L Sbjct: 237 A-GKDEIGQLLQALSTMQDNLSRVVSNVRQGSESVATASAEIAQGNQDLSARTESQASAL 295 Query: 298 EQTASAMEEIAATAQQSAEFARSANAQVAQASGVAQHGGQVMGDVVQTMGRIDESSRRIA 357 E+TA++MEE+++T +Q+A+ A+ AN AS VA GG+V+ VV TM I+ SS+RI+ Sbjct: 296 EETAASMEELSSTVKQNADNAKQANQLAQSASSVAIQGGEVVAQVVDTMKGINTSSQRIS 355 Query: 358 DIIGVIDSIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRTLAQRSATAAREIKELIN 417 DII VID IAFQTNILALNAAVEAARAGEQGRGFAVVASEVR+LA RSA AA+EIK LIN Sbjct: 356 DIISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRSLAGRSADAAKEIKNLIN 415 Query: 418 ASLAAVDGGMSLVGDAGKIIQDVVQNVELVRGTISEISVAAEEQSRGIAEVNIAISNMEQ 477 S+ V+ G +LVG AG + +VV ++ V + EIS A+ EQS G+++V A++ M+Q Sbjct: 416 DSVERVEQGTALVGQAGATMTEVVSSIRRVTDIMGEISAASSEQSAGVSQVGEAVTQMDQ 475 Query: 478 TTQQNASLVEQTTAATMQLNQQAVLLAEVISGFKLPAQYQ---*SSHPAIRQPAIPSGLP 534 TQQNA+LVE+ AA L QA L ++ FKL AQ Q SS P PA S P Sbjct: 476 ATQQNAALVEEMAAAASSLKSQAQDLVGTVAVFKL-AQGQEGFASSSPRAAAPANHSA-P 533 Query: 535 SLLQANR 541 L R Sbjct: 534 KQLSPAR 540