BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.0028.p (104 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|ZP_08273964.1| Malonate decarboxylase delta subunit [Oxaloba... 174 3e-42 ref|YP_004752364.1| malonate decarboxylase subunit delta [Collim... 167 4e-40 ref|YP_001099768.1| malonate decarboxylase subunit delta [Hermin... 152 1e-35 ref|ZP_08273816.1| Malonate decarboxylase delta subunit [Oxaloba... 148 2e-34 ref|YP_001354252.1| malonate decarboxylase subunit delta [Janthi... 141 3e-32 ref|ZP_00208571.1| hypothetical protein Magn03007492 [Magnetospi... 124 4e-27 ref|YP_001971101.1| malonate decarboxylase subunit delta [Stenot... 124 5e-27 ref|YP_004850156.1| malonate decarboxylase subunit delta [Xantho... 124 6e-27 ref|YP_002947241.1| malonate decarboxylase acyl carrier protein ... 122 2e-26 ref|YP_362326.1| malonate decarboxylase subunit delta [Xanthomon... 122 2e-26 >ref|ZP_08273964.1| Malonate decarboxylase delta subunit [Oxalobacteraceae bacterium IMCC9480] gb|EGF32570.1| Malonate decarboxylase delta subunit [Oxalobacteraceae bacterium IMCC9480] Length = 104 Score = 174 bits (442), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 83/102 (81%), Positives = 92/102 (90%) Query: 1 METLTFRFEHGQRRLKAAPELVGVVSSGNLEVLIENAALDGACAIEVKTAARGFGAIWEA 60 METLT+RFEHG+RR+ A PELVGVV SGNLEVLIE AA DGAC +E+ TAARGFGAIWEA Sbjct: 1 METLTYRFEHGKRRIPARPELVGVVGSGNLEVLIEAAAQDGACTVEISTAARGFGAIWEA 60 Query: 61 VMRDFQQRWQLADARISINDMGATPAVVSLRLDQAVEAMVEE 102 V+ DFQQRWQLAD RISINDMGATPAVV LRLDQAVEA++E+ Sbjct: 61 VITDFQQRWQLADTRISINDMGATPAVVRLRLDQAVEALLEQ 102 >ref|YP_004752364.1| malonate decarboxylase subunit delta [Collimonas fungivorans Ter331] gb|AEK61541.1| Malonate decarboxylase delta subunit [Collimonas fungivorans Ter331] Length = 105 Score = 167 bits (423), Expect = 4e-40, Method: Compositional matrix adjust. Identities = 81/100 (81%), Positives = 90/100 (90%) Query: 1 METLTFRFEHGQRRLKAAPELVGVVSSGNLEVLIENAALDGACAIEVKTAARGFGAIWEA 60 METL FRFEHG+R L +L GVVSSGNLEVL+E AAL+GACAIE+KTAARGFGAIWEA Sbjct: 2 METLNFRFEHGRRLLPPQAQLSGVVSSGNLEVLVEAAALNGACAIEIKTAARGFGAIWEA 61 Query: 61 VMRDFQQRWQLADARISINDMGATPAVVSLRLDQAVEAMV 100 V+ DFQQRWQLADARI+INDMGATPAVVSLRLDQA++AM Sbjct: 62 VLGDFQQRWQLADARIAINDMGATPAVVSLRLDQALQAMT 101 >ref|YP_001099768.1| malonate decarboxylase subunit delta [Herminiimonas arsenicoxydans] emb|CAL61641.1| malonate decarboxylase, delta subunit [Herminiimonas arsenicoxydans] Length = 104 Score = 152 bits (385), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 74/100 (74%), Positives = 83/100 (83%) Query: 1 METLTFRFEHGQRRLKAAPELVGVVSSGNLEVLIENAALDGACAIEVKTAARGFGAIWEA 60 METL FRFE+G RR+ ELVGVVSSGNLEVLIE A L+G C +EVKTAA GF AIW+A Sbjct: 1 METLNFRFENGTRRVTPHAELVGVVSSGNLEVLIETAVLNGGCEVEVKTAAVGFAAIWQA 60 Query: 61 VMRDFQQRWQLADARISINDMGATPAVVSLRLDQAVEAMV 100 V+ DF RW LAD RISIND+GATPAVVSLRLDQAVE+M+ Sbjct: 61 VIADFHLRWSLADVRISINDVGATPAVVSLRLDQAVESMM 100 >ref|ZP_08273816.1| Malonate decarboxylase delta subunit [Oxalobacteraceae bacterium IMCC9480] gb|EGF32716.1| Malonate decarboxylase delta subunit [Oxalobacteraceae bacterium IMCC9480] Length = 104 Score = 148 bits (374), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 73/100 (73%), Positives = 82/100 (82%) Query: 1 METLTFRFEHGQRRLKAAPELVGVVSSGNLEVLIENAALDGACAIEVKTAARGFGAIWEA 60 METL +RF+ GQR + LVGVVSSGNLEVL+E A L G C IEV+TAARGFG IW+A Sbjct: 1 METLNYRFDGGQRCGQQQALLVGVVSSGNLEVLVEPADLSGGCEIEVQTAARGFGTIWQA 60 Query: 61 VMRDFQQRWQLADARISINDMGATPAVVSLRLDQAVEAMV 100 VM DF RWQLAD RISINDMGATPAVVSLRLDQAVE+++ Sbjct: 61 VMSDFHARWQLADVRISINDMGATPAVVSLRLDQAVESLL 100 >ref|YP_001354252.1| malonate decarboxylase subunit delta [Janthinobacterium sp. Marseille] gb|ABR89260.1| malonate decarboxylase delta subunit [Janthinobacterium sp. Marseille] Length = 104 Score = 141 bits (356), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 69/100 (69%), Positives = 79/100 (79%) Query: 1 METLTFRFEHGQRRLKAAPELVGVVSSGNLEVLIENAALDGACAIEVKTAARGFGAIWEA 60 METL FRFE G RRL +VGVVSSGNLEVLIE+ L+G C +E+KTAA GFGAIW+A Sbjct: 1 METLNFRFEKGDRRLALQANMVGVVSSGNLEVLIESIDLNGGCEVEIKTAAVGFGAIWQA 60 Query: 61 VMRDFQQRWQLADARISINDMGATPAVVSLRLDQAVEAMV 100 V+ DF RW L D RI IND GATPAVVSLRLDQAVE+++ Sbjct: 61 VVADFHARWSLQDVRILINDAGATPAVVSLRLDQAVESVM 100 >ref|ZP_00208571.1| hypothetical protein Magn03007492 [Magnetospirillum magnetotacticum MS-1] Length = 105 Score = 124 bits (312), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 65/101 (64%), Positives = 74/101 (73%), Gaps = 1/101 (0%) Query: 1 METLTFRFEHGQRRLKAAPE-LVGVVSSGNLEVLIENAALDGACAIEVKTAARGFGAIWE 59 METL F + G+ + P LVGVV SGNLEVL+E L GAC +EV TAA GFG IW+ Sbjct: 1 METLNFEYRGGKPVAGSTPSTLVGVVGSGNLEVLVERQDLAGACKVEVLTAATGFGPIWQ 60 Query: 60 AVMRDFQQRWQLADARISINDMGATPAVVSLRLDQAVEAMV 100 AVM DF R LAD RISIND+GATPAVVSLRLDQAVE+ + Sbjct: 61 AVMDDFFDRHPLADIRISINDVGATPAVVSLRLDQAVESFL 101 >ref|YP_001971101.1| malonate decarboxylase subunit delta [Stenotrophomonas maltophilia K279a] sp|B2FSQ5.1|MDCC_STRMK RecName: Full=Malonate decarboxylase acyl carrier protein; AltName: Full=Malonate decarboxylase subunit delta emb|CAQ44787.1| putative malonate decarboxylase delta-subunit [Stenotrophomonas maltophilia K279a] Length = 106 Score = 124 bits (311), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 62/101 (61%), Positives = 77/101 (76%), Gaps = 1/101 (0%) Query: 1 METLTFRFE-HGQRRLKAAPELVGVVSSGNLEVLIENAALDGACAIEVKTAARGFGAIWE 59 METL +RFE H + LVGV++SGNLE+L+E AALDGA + + TAA+GFG++W+ Sbjct: 1 METLDYRFEGHTAVQFPRGAVLVGVLASGNLEILLEPAALDGAMTVRIITAAKGFGSVWQ 60 Query: 60 AVMRDFQQRWQLADARISINDMGATPAVVSLRLDQAVEAMV 100 AV+ DF QR L D RISIND GATPAVVSLRLDQAVE ++ Sbjct: 61 AVISDFAQRHPLRDVRISINDAGATPAVVSLRLDQAVETLL 101 >ref|YP_004850156.1| malonate decarboxylase subunit delta [Xanthomonas axonopodis pv. citrumelo F1] gb|AEO40858.1| malonate decarboxylase subunit delta [Xanthomonas axonopodis pv. citrumelo F1] Length = 105 Score = 124 bits (310), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 67/101 (66%), Positives = 80/101 (79%), Gaps = 3/101 (2%) Query: 1 METLTFRFEHGQRRLKAAPE--LVGVVSSGNLEVLIENAALDGACAIEVKTAARGFGAIW 58 METL +RF+ GQR +A E LVGVV+SGNLEVL+E L+GA IE+ TAARGFGAIW Sbjct: 1 METLRYRFD-GQRGARAGLEHALVGVVASGNLEVLVERVPLEGAMEIEILTAARGFGAIW 59 Query: 59 EAVMRDFQQRWQLADARISINDMGATPAVVSLRLDQAVEAM 99 +AV+ DF R L D RISIND+GATPAVVSLRL+QA+EA+ Sbjct: 60 QAVLDDFAARHPLRDVRISINDVGATPAVVSLRLEQALEAL 100 >ref|YP_002947241.1| malonate decarboxylase acyl carrier protein [Variovorax paradoxus S110] gb|ACS21975.1| malonate decarboxylase acyl carrier protein [Variovorax paradoxus S110] Length = 110 Score = 122 bits (307), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 64/96 (66%), Positives = 71/96 (73%), Gaps = 1/96 (1%) Query: 1 METLTFRFEHGQRRLKAAPELVGVVSSGNLEVLIENAALDGACAIEVKTAARGFGAIWEA 60 +ETL F F G AP LVGVV SGNLEV++E A DG CA+ V+T+ARGFG IW+A Sbjct: 8 LETLDFSFSGGWPAGAFAPVLVGVVGSGNLEVMLEPAGGDG-CAVRVETSARGFGPIWQA 66 Query: 61 VMRDFQQRWQLADARISINDMGATPAVVSLRLDQAV 96 VM DF R LA RISINDMGATPAVVSLRLDQAV Sbjct: 67 VMNDFHARHPLAGVRISINDMGATPAVVSLRLDQAV 102 >ref|YP_362326.1| malonate decarboxylase subunit delta [Xanthomonas campestris pv. vesicatoria str. 85-10] ref|ZP_08190034.1| malonate decarboxylase acyl carrier protein [Xanthomonas perforans 91-118] sp|Q3BY37.1|MDCC_XANC5 RecName: Full=Malonate decarboxylase acyl carrier protein; AltName: Full=Malonate decarboxylase subunit delta emb|CAJ22226.1| malonate decarboxylase delta subunit [Xanthomonas campestris pv. vesicatoria str. 85-10] gb|EGD12342.1| malonate decarboxylase acyl carrier protein [Xanthomonas perforans 91-118] Length = 105 Score = 122 bits (306), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 66/101 (65%), Positives = 79/101 (78%), Gaps = 3/101 (2%) Query: 1 METLTFRFEHGQRRLKAAPE--LVGVVSSGNLEVLIENAALDGACAIEVKTAARGFGAIW 58 METL +RF+ GQR +A E LVGVV+SGNLEVL+E L+GA IE+ TAARGFGAIW Sbjct: 1 METLRYRFD-GQRGARAGLEHALVGVVASGNLEVLVERVPLEGAMEIEILTAARGFGAIW 59 Query: 59 EAVMRDFQQRWQLADARISINDMGATPAVVSLRLDQAVEAM 99 +AV+ DF R L D RISIND+GATPAVVSLRL+QA+E + Sbjct: 60 QAVLDDFAARHPLRDVRISINDVGATPAVVSLRLEQALEVL 100