BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.0027.p (555 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776087.1| malonate decarboxylase alpha subunit [Herbas... 1138 0.0 ref|YP_004752363.1| malonate decarboxylase subunit alpha [Collim... 986 0.0 ref|YP_001354253.1| malonate decarboxylase alpha subunit [Janthi... 979 0.0 ref|YP_001099767.1| malonate decarboxylase subunit alpha [Hermin... 941 0.0 ref|YP_523100.1| alpha subunit of malonate decarboxylase [Rhodof... 930 0.0 ref|YP_003451521.1| malonate decarboxylase alpha subunit [Azospi... 908 0.0 ref|NP_640913.1| alpha subunit of malonate decarboxylase [Xantho... 898 0.0 ref|ZP_06486949.1| malonate decarboxylase alpha subunit [Xanthom... 898 0.0 gb|AEL08803.1| alpha subunit of malonate decarboxylase [Xanthomo... 895 0.0 ref|ZP_08185225.1| malonate decarboxylase, alpha subunit [Xantho... 895 0.0 >ref|YP_003776087.1| malonate decarboxylase alpha subunit [Herbaspirillum seropedicae SmR1] gb|ADJ64179.1| malonate decarboxylase alpha subunit protein [Herbaspirillum seropedicae SmR1] Length = 555 Score = 1138 bits (2944), Expect = 0.0, Method: Compositional matrix adjust. Identities = 554/555 (99%), Positives = 555/555 (100%) Query: 1 MSSSERVWNARQKNREQRLARATAVLGSQLQGKIAPADKLADLLYAVLENGDRVCVEGNN 60 MSSSERVWNARQKNREQRLARATAVLGSQLQGKIAPADKLADLLYAVLENGDRVCVEGNN Sbjct: 1 MSSSERVWNARQKNREQRLARATAVLGSQLQGKIAPADKLADLLYAVLENGDRVCVEGNN 60 Query: 61 QKQADFLAKGLAALDPARVNGLHMLFSVLALPEHLDVFEKGIADRLDFSFSGPQAGRLAK 120 QKQADFLAKGLAALDPARVNGLHMLFSVLALPEHLDVFEKGIADRLDFSFSGPQAGRLAK Sbjct: 61 QKQADFLAKGLAALDPARVNGLHMLFSVLALPEHLDVFEKGIADRLDFSFSGPQAGRLAK 120 Query: 121 LASAGKLNIGAIHTYLELFGRYFVDLTPRVALVAAQAADRHGNLYTGPNTEDTPAIAEAT 180 LASAGKLNIGAIHTYLELFGRYFVDLTPRVALVAAQAADRHGNLYTGPNTEDTPAIAEAT Sbjct: 121 LASAGKLNIGAIHTYLELFGRYFVDLTPRVALVAAQAADRHGNLYTGPNTEDTPAIAEAT 180 Query: 181 AFSSGIVIAQVNEIVDELPRVDIPADWVGFAIKAPTPHYIEPLFTRDPAQISEIQVLMAM 240 AFSSGIVIAQVNEIVDELPRVDIPADWVGFAIKAPTPHYIEPLFTRDPAQISEIQVLMAM Sbjct: 181 AFSSGIVIAQVNEIVDELPRVDIPADWVGFAIKAPTPHYIEPLFTRDPAQISEIQVLMAM 240 Query: 241 MAIKGIYAEYGVQRLNHGIGFDTAAIELILPTYAESLGLRGKICKHWALNPHPALIPAIE 300 MAIKGIYAEYGVQRLNHGIGFDTAAIELILPTYAESLGLRGKICKHWALNPHPALIPAIE Sbjct: 241 MAIKGIYAEYGVQRLNHGIGFDTAAIELILPTYAESLGLRGKICKHWALNPHPALIPAIE 300 Query: 301 AGFVESVHSFGSELGMEDYIRARPDIFFVGPDGSMRSNRAFSQTAGHYGCDMFIGSTLQI 360 AGFVESVHSFGSELGMEDYIRARPDIFFVGPDGSMRSNRAFSQTAGHYGCDMFIGSTLQI Sbjct: 301 AGFVESVHSFGSELGMEDYIRARPDIFFVGPDGSMRSNRAFSQTAGHYGCDMFIGSTLQI 360 Query: 361 DLQGNSSTATLGRIAGFGGAPNMGADARGRRHASEAWLKAGQQARAGRHTIPRGQKLVVQ 420 DLQGNSSTATLGRIAGFGGAPNMGADARGRRHASEAWLKAGQQARAGRHTIPRGQKLVVQ Sbjct: 361 DLQGNSSTATLGRIAGFGGAPNMGADARGRRHASEAWLKAGQQARAGRHTIPRGQKLVVQ 420 Query: 421 TVETFREHMQPAFVEKLDAWQLGEQAKMPIPPVMIYGDDVTHILTEEGIANLLLCRTEEE 480 TVETFREHMQPAFVE+LDAWQLGEQAKMPIPPVMIYGDDVTHILTEEGIANLLLCRTEEE Sbjct: 421 TVETFREHMQPAFVERLDAWQLGEQAKMPIPPVMIYGDDVTHILTEEGIANLLLCRTEEE 480 Query: 481 REQAIRGVAGYTAVGMGRDRRMVENLRDRGIIRRAEDLGIDKRMATRDLLAAKNMKDLVR 540 REQAIRGVAGYTAVGMGRDRRMVENLRDRGIIRRAEDLGIDKRMATRDLLAAKNMKDLVR Sbjct: 481 REQAIRGVAGYTAVGMGRDRRMVENLRDRGIIRRAEDLGIDKRMATRDLLAAKNMKDLVR 540 Query: 541 ASGGLYNPPKRFRNW 555 ASGGLYNPPKRFRNW Sbjct: 541 ASGGLYNPPKRFRNW 555 >ref|YP_004752363.1| malonate decarboxylase subunit alpha [Collimonas fungivorans Ter331] gb|AEK61540.1| Malonate decarboxylase alpha subunit [Collimonas fungivorans Ter331] Length = 553 Score = 986 bits (2549), Expect = 0.0, Method: Compositional matrix adjust. Identities = 468/550 (85%), Positives = 510/550 (92%) Query: 6 RVWNARQKNREQRLARATAVLGSQLQGKIAPADKLADLLYAVLENGDRVCVEGNNQKQAD 65 R W+ R NREQRL RA ++LG +GK+ +++ADLLY+VLE+GDRVC+EGNNQKQAD Sbjct: 4 RRWDLRNVNREQRLQRAASLLGGACKGKLVETERIADLLYSVLESGDRVCLEGNNQKQAD 63 Query: 66 FLAKGLAALDPARVNGLHMLFSVLALPEHLDVFEKGIADRLDFSFSGPQAGRLAKLASAG 125 FLAK LA LDPAR++GLHML SVLALPEHLDVFE G+A+RLDFSFSGPQ+ RLA+L +AG Sbjct: 64 FLAKALARLDPARISGLHMLLSVLALPEHLDVFENGVAERLDFSFSGPQSVRLARLVAAG 123 Query: 126 KLNIGAIHTYLELFGRYFVDLTPRVALVAAQAADRHGNLYTGPNTEDTPAIAEATAFSSG 185 KLNIGAIHTYLELFGRYFVDLTPRVALVAAQAADR GNLYTGPNTEDTPAI EATAFS G Sbjct: 124 KLNIGAIHTYLELFGRYFVDLTPRVALVAAQAADRQGNLYTGPNTEDTPAIVEATAFSGG 183 Query: 186 IVIAQVNEIVDELPRVDIPADWVGFAIKAPTPHYIEPLFTRDPAQISEIQVLMAMMAIKG 245 IVIAQVNEIVD LPRVDIPADWV F ++APTPHYIEPLFTRDPAQISEIQVLMAMMAIKG Sbjct: 184 IVIAQVNEIVDVLPRVDIPADWVSFVVQAPTPHYIEPLFTRDPAQISEIQVLMAMMAIKG 243 Query: 246 IYAEYGVQRLNHGIGFDTAAIELILPTYAESLGLRGKICKHWALNPHPALIPAIEAGFVE 305 IYAEY VQRLNHGIGFDTAAIELILPTYA SLGL+GKIC+HWALNPHPALIPAIEAGFVE Sbjct: 244 IYAEYEVQRLNHGIGFDTAAIELILPTYAASLGLKGKICQHWALNPHPALIPAIEAGFVE 303 Query: 306 SVHSFGSELGMEDYIRARPDIFFVGPDGSMRSNRAFSQTAGHYGCDMFIGSTLQIDLQGN 365 S+HSFGSELGMEDYIRAR D+FFVG DGSMRSNRAFSQ AGHY CDMFIGSTLQIDLQGN Sbjct: 304 SIHSFGSELGMEDYIRARSDVFFVGGDGSMRSNRAFSQVAGHYACDMFIGSTLQIDLQGN 363 Query: 366 SSTATLGRIAGFGGAPNMGADARGRRHASEAWLKAGQQARAGRHTIPRGQKLVVQTVETF 425 SSTAT GRIAGFGGAPNMGADARGRRHAS AWLKAG+QAR G++ IPRGQKLVVQ VETF Sbjct: 364 SSTATTGRIAGFGGAPNMGADARGRRHASPAWLKAGRQARDGKNLIPRGQKLVVQIVETF 423 Query: 426 REHMQPAFVEKLDAWQLGEQAKMPIPPVMIYGDDVTHILTEEGIANLLLCRTEEEREQAI 485 REHMQPAFVE+LDAW+L EQA M IPPVMIYG+DV+HILTEEG+ANLLLCRT+EEREQA+ Sbjct: 424 REHMQPAFVERLDAWELAEQADMAIPPVMIYGEDVSHILTEEGLANLLLCRTDEEREQAV 483 Query: 486 RGVAGYTAVGMGRDRRMVENLRDRGIIRRAEDLGIDKRMATRDLLAAKNMKDLVRASGGL 545 RGVAGYT +G+GRD+RMVENLRDRGII+R EDLGID+R+ATRDLLAAK+MKDLVRASGGL Sbjct: 484 RGVAGYTPIGLGRDKRMVENLRDRGIIQRPEDLGIDQRLATRDLLAAKSMKDLVRASGGL 543 Query: 546 YNPPKRFRNW 555 Y+PPKRFRNW Sbjct: 544 YDPPKRFRNW 553 >ref|YP_001354253.1| malonate decarboxylase alpha subunit [Janthinobacterium sp. Marseille] gb|ABR89259.1| malonate decarboxylase alpha subunit [Janthinobacterium sp. Marseille] Length = 555 Score = 979 bits (2531), Expect = 0.0, Method: Compositional matrix adjust. Identities = 465/555 (83%), Positives = 507/555 (91%) Query: 1 MSSSERVWNARQKNREQRLARATAVLGSQLQGKIAPADKLADLLYAVLENGDRVCVEGNN 60 M S+R W+ RQKNR+ RL RA LG+ L GK+ A+++ +LL++V+E+GDRVC+EGNN Sbjct: 1 MQGSKREWDHRQKNRDARLVRAAGKLGAALSGKLVQAERMVELLHSVIESGDRVCLEGNN 60 Query: 61 QKQADFLAKGLAALDPARVNGLHMLFSVLALPEHLDVFEKGIADRLDFSFSGPQAGRLAK 120 QKQADFLA L LDPA+V+ LHML SVLALPEHLD+FEKGIA +LDFSFSGPQ +LA+ Sbjct: 61 QKQADFLAAALCQLDPAQVHDLHMLQSVLALPEHLDLFEKGIASKLDFSFSGPQGAQLAR 120 Query: 121 LASAGKLNIGAIHTYLELFGRYFVDLTPRVALVAAQAADRHGNLYTGPNTEDTPAIAEAT 180 L +AGK+NIGAIHTYLELFGRYF+DLTPRVAL+AAQAADRHGNLYTGPNTEDTPAI EAT Sbjct: 121 LVAAGKINIGAIHTYLELFGRYFIDLTPRVALIAAQAADRHGNLYTGPNTEDTPAIVEAT 180 Query: 181 AFSSGIVIAQVNEIVDELPRVDIPADWVGFAIKAPTPHYIEPLFTRDPAQISEIQVLMAM 240 AF +GIVIAQVNEIVD LPRVD+PADWV F ++APTPHYIEPLFTRDPA ISE+QVLMAM Sbjct: 181 AFKNGIVIAQVNEIVDVLPRVDVPADWVDFVVQAPTPHYIEPLFTRDPALISEVQVLMAM 240 Query: 241 MAIKGIYAEYGVQRLNHGIGFDTAAIELILPTYAESLGLRGKICKHWALNPHPALIPAIE 300 MAIKGIYAEYGV+R+NHGIGFDTAAIELILPTYAESLGLRGKI +HWALNPHPALIPAIE Sbjct: 241 MAIKGIYAEYGVERINHGIGFDTAAIELILPTYAESLGLRGKIGRHWALNPHPALIPAIE 300 Query: 301 AGFVESVHSFGSELGMEDYIRARPDIFFVGPDGSMRSNRAFSQTAGHYGCDMFIGSTLQI 360 AGFVESVHSFGSELGME YI +RPD+FFVG DGSMRSNRA Q AGHY CDMFIGSTLQI Sbjct: 301 AGFVESVHSFGSELGMERYIESRPDVFFVGRDGSMRSNRAMCQVAGHYACDMFIGSTLQI 360 Query: 361 DLQGNSSTATLGRIAGFGGAPNMGADARGRRHASEAWLKAGQQARAGRHTIPRGQKLVVQ 420 DLQGNSSTATLGRIAGFGGAPNMG+DARGRRH+S AWLKAGQQA+ G+ IPRGQKLVVQ Sbjct: 361 DLQGNSSTATLGRIAGFGGAPNMGSDARGRRHSSPAWLKAGQQAQQGKKKIPRGQKLVVQ 420 Query: 421 TVETFREHMQPAFVEKLDAWQLGEQAKMPIPPVMIYGDDVTHILTEEGIANLLLCRTEEE 480 VETFREHMQPAFVE+LDAWQL EQAK+ IPPVMIYGDDVTHILTEEGIANLLLCRTEEE Sbjct: 421 MVETFREHMQPAFVEELDAWQLAEQAKLDIPPVMIYGDDVTHILTEEGIANLLLCRTEEE 480 Query: 481 REQAIRGVAGYTAVGMGRDRRMVENLRDRGIIRRAEDLGIDKRMATRDLLAAKNMKDLVR 540 REQAIRGVAGYTAVGM RDR+MVENLRDRGII RAED+GIDKRMATRDLLAAKNMKDLVR Sbjct: 481 REQAIRGVAGYTAVGMARDRKMVENLRDRGIILRAEDMGIDKRMATRDLLAAKNMKDLVR 540 Query: 541 ASGGLYNPPKRFRNW 555 ASGGLY PPKRFRNW Sbjct: 541 ASGGLYAPPKRFRNW 555 >ref|YP_001099767.1| malonate decarboxylase subunit alpha [Herminiimonas arsenicoxydans] emb|CAL61640.1| malonate decarboxylase, alpha subunit [Herminiimonas arsenicoxydans] Length = 550 Score = 941 bits (2432), Expect = 0.0, Method: Compositional matrix adjust. Identities = 455/552 (82%), Positives = 493/552 (89%), Gaps = 9/552 (1%) Query: 8 WNARQKNREQRLARATAVLGSQLQGKIAPADKLADLLYAVLENGDRVCVEGNNQKQADFL 67 WN +NR +R+AR A+ G+IA K+ LL AV+E+GDRVC+EGNNQKQA+FL Sbjct: 4 WNLLSENRGKRIARGLAI-----TGRIADPGKIVALLEAVIESGDRVCLEGNNQKQANFL 58 Query: 68 AKGLAALDPARVNGLHMLFSVLALPEHLDVFEKGIADRLDFSFSGPQAGRLAKLASAGKL 127 A L ALDPARV+ LHML SVLALPEHLD+F+KGIA RLDFSFSGPQA RLA+L + GK+ Sbjct: 59 AGALCALDPARVHDLHMLLSVLALPEHLDIFDKGIASRLDFSFSGPQAVRLARLVATGKI 118 Query: 128 NIGAIHTYLELFGRYFVDLTPRVALVAAQAADRHGNLYTGPNTEDTPAIAEATAFSSGIV 187 NIGAIHTYLELFGRYF+DLTPRVALVAAQAADR GNLYTGPNTEDTPAI EATAF +GIV Sbjct: 119 NIGAIHTYLELFGRYFIDLTPRVALVAAQAADRQGNLYTGPNTEDTPAIVEATAFKNGIV 178 Query: 188 IAQVNEIVDELPRVDIPADWVGFAIKAPTPHYIEPLFTRDPAQISEIQVLMAMMAIKGIY 247 IAQVNEIVD LPRVDIPADWV F + APTPHYIEPLFTRDPA ISE+QVLMAMMAIKGIY Sbjct: 179 IAQVNEIVDVLPRVDIPADWVDFVVPAPTPHYIEPLFTRDPALISEVQVLMAMMAIKGIY 238 Query: 248 AEYGVQRLNHGIGFDTAAIELILPTYAESLGLRGKICKHWALNPHPALIPAIEAGFVESV 307 AEYGV+R+NHGIGFDTAAIELILPTYAESLGL+GKI +HWALNPHPALIPAIEAGFVESV Sbjct: 239 AEYGVERINHGIGFDTAAIELILPTYAESLGLKGKIGRHWALNPHPALIPAIEAGFVESV 298 Query: 308 HSFGSELGMEDYIRARPDIFFVGPDGSMRSNRAFSQTAGHYGCDMFIGSTLQIDLQGNSS 367 HSFGSELGME YI ARPD+FFVG DGSMRSNRA SQ AGHY CDMFIGSTLQID+QGNSS Sbjct: 299 HSFGSELGMERYIEARPDVFFVGRDGSMRSNRAMSQVAGHYACDMFIGSTLQIDMQGNSS 358 Query: 368 TATLGRIAGFGGAPNMGADARGRRHASEAWLKAGQQARAG----RHTIPRGQKLVVQTVE 423 TATLGRI+GFGGAPNMG+DARGRRH S AWLKAG+QAR + +PRGQKLVVQ VE Sbjct: 359 TATLGRISGFGGAPNMGSDARGRRHPSAAWLKAGEQARQQTSQEKKKMPRGQKLVVQIVE 418 Query: 424 TFREHMQPAFVEKLDAWQLGEQAKMPIPPVMIYGDDVTHILTEEGIANLLLCRTEEEREQ 483 TFREHMQPAFVE+LDAW++ EQAK+ IPPVMIYGDDVTHILTEEGIANLLLCRTEEEREQ Sbjct: 419 TFREHMQPAFVEELDAWKVAEQAKLAIPPVMIYGDDVTHILTEEGIANLLLCRTEEEREQ 478 Query: 484 AIRGVAGYTAVGMGRDRRMVENLRDRGIIRRAEDLGIDKRMATRDLLAAKNMKDLVRASG 543 AIRGVAGYT VGM RD++MVENLRDRGII RAED+GIDKRMATRDLLAAKNMKDLVRASG Sbjct: 479 AIRGVAGYTPVGMARDKKMVENLRDRGIILRAEDMGIDKRMATRDLLAAKNMKDLVRASG 538 Query: 544 GLYNPPKRFRNW 555 GLY PPKRFRNW Sbjct: 539 GLYAPPKRFRNW 550 >ref|YP_523100.1| alpha subunit of malonate decarboxylase [Rhodoferax ferrireducens T118] gb|ABD69569.1| alpha subunit of malonate decarboxylase [Rhodoferax ferrireducens T118] Length = 558 Score = 930 bits (2403), Expect = 0.0, Method: Compositional matrix adjust. Identities = 451/558 (80%), Positives = 490/558 (87%), Gaps = 3/558 (0%) Query: 1 MSSSERVWNARQKNREQRLARATAVLGSQLQGKIAPADKLADLLYAVLENGDRVCVEGNN 60 M+ + WN + + R QRL RA AVLG++L GK A+ LL AVLE GDRVC+EGNN Sbjct: 1 MNQANGRWNQQAQGRAQRLGRAAAVLGTRLHGKRVLAEDATKLLEAVLEPGDRVCLEGNN 60 Query: 61 QKQADFLAKGLAALDPARVNGLHMLFSVLALPEHLDVFEKGIADRLDFSFSGPQAGRLAK 120 QKQADFLA+ LA L+PA+V+GLHM+ SVLALPEHLDVFE GIA +LDFSFSGPQ+ RLAK Sbjct: 61 QKQADFLARALAQLNPAQVHGLHMVQSVLALPEHLDVFESGIASKLDFSFSGPQSARLAK 120 Query: 121 LASAGKLNIGAIHTYLELFGRYFVDLTPRVALVAAQAADRHGNLYTGPNTEDTPAIAEAT 180 L S G++ IGAIHTYLELF RYFVDLTPRV+LV AQAAD HGNL+TGPNTEDTPAI EAT Sbjct: 121 LVSGGQIQIGAIHTYLELFSRYFVDLTPRVSLVCAQAADAHGNLFTGPNTEDTPAIVEAT 180 Query: 181 AFSSGIVIAQVNEIVDELPRVDIPADWVGFAIKAPTPHYIEPLFTRDPAQISEIQVLMAM 240 AF SGIVIAQVNE+V+ + RVDIP DWV F I AP P+ IEPLFTRDPAQISEIQVLMAM Sbjct: 181 AFKSGIVIAQVNELVETVDRVDIPGDWVDFVILAPKPNVIEPLFTRDPAQISEIQVLMAM 240 Query: 241 MAIKGIYAEYGVQRLNHGIGFDTAAIELILPTYAESLGLRGKICKHWALNPHPALIPAIE 300 MAIKGIYAEYGVQRLNHGIGFDTAAIEL+LPTYAESLGL+GKIC HWALNPHPALIPAIE Sbjct: 241 MAIKGIYAEYGVQRLNHGIGFDTAAIELLLPTYAESLGLKGKICNHWALNPHPALIPAIE 300 Query: 301 AGFVESVHSFGSELGMEDYIRARPDIFFVGPDGSMRSNRAFSQTAGHYGCDMFIGSTLQI 360 AG+VESVHSFGSELGME+YIRARPD+FF G DGS+RSNRA Q AGHY CDMFIGSTLQI Sbjct: 301 AGWVESVHSFGSELGMENYIRARPDVFFTGADGSLRSNRALCQAAGHYACDMFIGSTLQI 360 Query: 361 DLQGNSSTATLGRIAGFGGAPNMGADARGRRHASEAWLKAGQQARAGR---HTIPRGQKL 417 DL G+SSTATLGRIAGFGGAPNMGADARGRRHA+ AWLKAG QA GR +PRGQKL Sbjct: 361 DLNGHSSTATLGRIAGFGGAPNMGADARGRRHATPAWLKAGAQAHQGRTGVSAMPRGQKL 420 Query: 418 VVQTVETFREHMQPAFVEKLDAWQLGEQAKMPIPPVMIYGDDVTHILTEEGIANLLLCRT 477 VVQ VETFREHMQPAFVEKLDAWQL EQA M IPPVMIYGDDVTHILTEEGIANLLLCRT Sbjct: 421 VVQIVETFREHMQPAFVEKLDAWQLAEQAHMEIPPVMIYGDDVTHILTEEGIANLLLCRT 480 Query: 478 EEEREQAIRGVAGYTAVGMGRDRRMVENLRDRGIIRRAEDLGIDKRMATRDLLAAKNMKD 537 +EEREQAIRGVAGYT VG+ RDRRMVENLRDRGII+RAED+GIDKR ATR LLAA+ M+D Sbjct: 481 DEEREQAIRGVAGYTPVGLARDRRMVENLRDRGIIQRAEDIGIDKRDATRSLLAARTMRD 540 Query: 538 LVRASGGLYNPPKRFRNW 555 LVRASGGLY+PPKRFRNW Sbjct: 541 LVRASGGLYDPPKRFRNW 558 >ref|YP_003451521.1| malonate decarboxylase alpha subunit [Azospirillum sp. B510] dbj|BAI74977.1| malonate decarboxylase alpha subunit [Azospirillum sp. B510] Length = 554 Score = 908 bits (2347), Expect = 0.0, Method: Compositional matrix adjust. Identities = 443/554 (79%), Positives = 489/554 (88%), Gaps = 4/554 (0%) Query: 2 SSSERVWNARQKNREQRLARATAVLGSQLQGKIAPADKLADLLYAVLENGDRVCVEGNNQ 61 + + R WN R +NR+ RLARA + +GK A + LL AVLE DRVC+EGNNQ Sbjct: 5 ADTMRDWNLRGRNRDARLARAAGLT----EGKRVAAANASALLEAVLEPEDRVCLEGNNQ 60 Query: 62 KQADFLAKGLAALDPARVNGLHMLFSVLALPEHLDVFEKGIADRLDFSFSGPQAGRLAKL 121 KQADFLA+ LA++DPARVNGLHM+ SVLALPEHLDVFE+GIA +LDFSFSGPQ RLA++ Sbjct: 61 KQADFLARSLASVDPARVNGLHMVQSVLALPEHLDVFERGIASKLDFSFSGPQGARLARM 120 Query: 122 ASAGKLNIGAIHTYLELFGRYFVDLTPRVALVAAQAADRHGNLYTGPNTEDTPAIAEATA 181 + G++ IGAIHTYLELFGRYFVDLTPRV+LVAAQAAD GNLYTGPNTEDTP I EATA Sbjct: 121 VADGRIAIGAIHTYLELFGRYFVDLTPRVSLVAAQAADAAGNLYTGPNTEDTPVIVEATA 180 Query: 182 FSSGIVIAQVNEIVDELPRVDIPADWVGFAIKAPTPHYIEPLFTRDPAQISEIQVLMAMM 241 F GIVIAQVNE+V+ +PRVDIP WV F I++PTPHYIEPLFTRDPAQISEIQVLMAMM Sbjct: 181 FKRGIVIAQVNELVETVPRVDIPGGWVDFVIQSPTPHYIEPLFTRDPAQISEIQVLMAMM 240 Query: 242 AIKGIYAEYGVQRLNHGIGFDTAAIELILPTYAESLGLRGKICKHWALNPHPALIPAIEA 301 AIKGIYAEYG+QRLNHGIGFDTAAIEL+LPTYAESLGL+G+IC+HWALNPHPALIPAIEA Sbjct: 241 AIKGIYAEYGIQRLNHGIGFDTAAIELLLPTYAESLGLKGRICRHWALNPHPALIPAIEA 300 Query: 302 GFVESVHSFGSELGMEDYIRARPDIFFVGPDGSMRSNRAFSQTAGHYGCDMFIGSTLQID 361 GFVESVHSFGSELGME YIR RPD+FF G DG+MRSNRA Q AGHY CD+FIGSTLQID Sbjct: 301 GFVESVHSFGSELGMEAYIRERPDVFFTGSDGNMRSNRAMCQAAGHYACDLFIGSTLQID 360 Query: 362 LQGNSSTATLGRIAGFGGAPNMGADARGRRHASEAWLKAGQQARAGRHTIPRGQKLVVQT 421 L GNSSTATLGRIAGFGGAPNMGADARGRRHAS AWLKAG++AR G +PRGQKLVVQ Sbjct: 361 LAGNSSTATLGRIAGFGGAPNMGADARGRRHASPAWLKAGREAREGGGQMPRGQKLVVQM 420 Query: 422 VETFREHMQPAFVEKLDAWQLGEQAKMPIPPVMIYGDDVTHILTEEGIANLLLCRTEEER 481 VETFREHMQPAFVE+LDAW+L E A M +PPVMIYG+DVTHILTEEGIANLLLCRT EER Sbjct: 421 VETFREHMQPAFVERLDAWELAESAGMELPPVMIYGEDVTHILTEEGIANLLLCRTAEER 480 Query: 482 EQAIRGVAGYTAVGMGRDRRMVENLRDRGIIRRAEDLGIDKRMATRDLLAAKNMKDLVRA 541 EQAIRGVAGYT VG GRDRRMVENLRDRG+IRR EDLGIDKR+ATRDLLAA+++KDLVRA Sbjct: 481 EQAIRGVAGYTPVGRGRDRRMVENLRDRGVIRRPEDLGIDKRLATRDLLAARSIKDLVRA 540 Query: 542 SGGLYNPPKRFRNW 555 SGGLY+PPKRFRNW Sbjct: 541 SGGLYDPPKRFRNW 554 >ref|NP_640913.1| alpha subunit of malonate decarboxylase [Xanthomonas axonopodis pv. citri str. 306] gb|AAM35449.1| alpha subunit of malonate decarboxylase [Xanthomonas axonopodis pv. citri str. 306] Length = 548 Score = 898 bits (2321), Expect = 0.0, Method: Compositional matrix adjust. Identities = 434/550 (78%), Positives = 482/550 (87%), Gaps = 4/550 (0%) Query: 6 RVWNARQKNREQRLARATAVLGSQLQGKIAPADKLADLLYAVLENGDRVCVEGNNQKQAD 65 R W+ + +R QRL RA A+ QG++ AD + LL AV+E GDRVC+EGNNQKQAD Sbjct: 3 RQWDTQADSRRQRLQRAAALAP---QGRVVAADDVVALLEAVIEPGDRVCLEGNNQKQAD 59 Query: 66 FLAKGLAALDPARVNGLHMLFSVLALPEHLDVFEKGIADRLDFSFSGPQAGRLAKLASAG 125 FLA+ L +DPARV+ LHM+ SVL+L HLDVFE+GIA RLDFSFSGPQA RLA L S G Sbjct: 60 FLARCLTEVDPARVHDLHMVQSVLSLAAHLDVFERGIAKRLDFSFSGPQAARLAGLVSEG 119 Query: 126 KLNIGAIHTYLELFGRYFVDLTPRVALVAAQAADRHGNLYTGPNTEDTPAIAEATAFSSG 185 ++ IGAIHTYLELFGRYF+DLTPR+ALV AQAADRHGNLYTGPNTEDTP I EATAF G Sbjct: 120 RIEIGAIHTYLELFGRYFIDLTPRIALVTAQAADRHGNLYTGPNTEDTPVIVEATAFKGG 179 Query: 186 IVIAQVNEIVDELPRVDIPADWVGFAIKAPTPHYIEPLFTRDPAQISEIQVLMAMMAIKG 245 IVIAQVNEI+D LPRVDIPADWV F +AP P+YIEPLFTRDPAQISEIQVLMAMMAIKG Sbjct: 180 IVIAQVNEILDTLPRVDIPADWVDFVTQAPKPNYIEPLFTRDPAQISEIQVLMAMMAIKG 239 Query: 246 IYAEYGVQRLNHGIGFDTAAIELILPTYAESLGLRGKICKHWALNPHPALIPAIEAGFVE 305 IYAEYGV RLNHGIGFDTAAIEL+LPTYA+SLGL+GKIC+HWALNPHPALIPAIE+GFV+ Sbjct: 240 IYAEYGVDRLNHGIGFDTAAIELLLPTYAQSLGLKGKICRHWALNPHPALIPAIESGFVQ 299 Query: 306 SVHSFGSELGMEDYIRARPDIFFVGPDGSMRSNRAFSQTAGHYGCDMFIGSTLQIDLQGN 365 SVHSFGSELGME+YI ARPDIFF G DGSMRSNRA SQTAG Y CDMFIGSTLQIDLQGN Sbjct: 300 SVHSFGSELGMENYIAARPDIFFTGADGSMRSNRALSQTAGLYACDMFIGSTLQIDLQGN 359 Query: 366 SSTATLGRIAGFGGAPNMGADARGRRHASEAWLKAGQQARAGRHTIPRGQKLVVQTVETF 425 SSTAT RIAGFGGAPNMG+DARGRRHAS AWLKAG++A A +PRG+KLVVQ VETF Sbjct: 360 SSTATRDRIAGFGGAPNMGSDARGRRHASAAWLKAGREA-ATPGEMPRGRKLVVQMVETF 418 Query: 426 REHMQPAFVEKLDAWQLGEQAKMPIPPVMIYGDDVTHILTEEGIANLLLCRTEEEREQAI 485 REHM PAFV+KLDAW+L E+A MP+PPVMIYGDDV+H+LTEEGIANLLLCRT EEREQAI Sbjct: 419 REHMAPAFVDKLDAWELAERANMPLPPVMIYGDDVSHVLTEEGIANLLLCRTPEEREQAI 478 Query: 486 RGVAGYTAVGMGRDRRMVENLRDRGIIRRAEDLGIDKRMATRDLLAAKNMKDLVRASGGL 545 RGV+GYTAVG+GRDRRMVENLRDRG+I+R +DLGI R ATRDLLAA+ +KDLVR SGGL Sbjct: 479 RGVSGYTAVGLGRDRRMVENLRDRGVIKRPDDLGIRPRDATRDLLAARTVKDLVRWSGGL 538 Query: 546 YNPPKRFRNW 555 Y+PPKRFRNW Sbjct: 539 YDPPKRFRNW 548 >ref|ZP_06486949.1| malonate decarboxylase alpha subunit [Xanthomonas campestris pv. vasculorum NCPPB702] Length = 548 Score = 898 bits (2320), Expect = 0.0, Method: Compositional matrix adjust. Identities = 435/550 (79%), Positives = 480/550 (87%), Gaps = 4/550 (0%) Query: 6 RVWNARQKNREQRLARATAVLGSQLQGKIAPADKLADLLYAVLENGDRVCVEGNNQKQAD 65 R W+ + ++R QRL RA A+ QG++ AD + LL AV+E GDRVC+EGNNQKQAD Sbjct: 3 RQWDTQAESRRQRLQRAAALAP---QGRVVAADDVVALLEAVIEPGDRVCLEGNNQKQAD 59 Query: 66 FLAKGLAALDPARVNGLHMLFSVLALPEHLDVFEKGIADRLDFSFSGPQAGRLAKLASAG 125 FLA+ L +DPARV+ LHM+ SVL+L HLDVFE+GIA RLDFSFSGPQA RLA L S G Sbjct: 60 FLARCLTEVDPARVHDLHMVQSVLSLAAHLDVFERGIAKRLDFSFSGPQAARLAGLVSDG 119 Query: 126 KLNIGAIHTYLELFGRYFVDLTPRVALVAAQAADRHGNLYTGPNTEDTPAIAEATAFSSG 185 ++ IGAIHTYLELFGRYF+DLTPR+ALV AQAADRHGNLYTGPNTEDTP I EATAF G Sbjct: 120 RIQIGAIHTYLELFGRYFIDLTPRIALVTAQAADRHGNLYTGPNTEDTPVIVEATAFKGG 179 Query: 186 IVIAQVNEIVDELPRVDIPADWVGFAIKAPTPHYIEPLFTRDPAQISEIQVLMAMMAIKG 245 IVIAQVNEIVD LPRVDIPADWV F +AP P+YIEPLFTRDPAQISEIQVLMAMMAIKG Sbjct: 180 IVIAQVNEIVDTLPRVDIPADWVDFVTQAPKPNYIEPLFTRDPAQISEIQVLMAMMAIKG 239 Query: 246 IYAEYGVQRLNHGIGFDTAAIELILPTYAESLGLRGKICKHWALNPHPALIPAIEAGFVE 305 IYAEYGV RLNHGIGFDTAAIEL+LPTYAESLGL+GKIC+HWALNPHPALIPAIE+GFV Sbjct: 240 IYAEYGVDRLNHGIGFDTAAIELLLPTYAESLGLKGKICRHWALNPHPALIPAIESGFVH 299 Query: 306 SVHSFGSELGMEDYIRARPDIFFVGPDGSMRSNRAFSQTAGHYGCDMFIGSTLQIDLQGN 365 SVHSFGSELGME YI ARPDIFF G DGSMRSNR SQTAG Y CDMFIGSTLQIDLQGN Sbjct: 300 SVHSFGSELGMEKYIAARPDIFFTGADGSMRSNRTLSQTAGLYACDMFIGSTLQIDLQGN 359 Query: 366 SSTATLGRIAGFGGAPNMGADARGRRHASEAWLKAGQQARAGRHTIPRGQKLVVQTVETF 425 SSTAT RIAGFGGAPNMG+DARGRRHAS AWLKAG++A A +PRG+KLVVQ VETF Sbjct: 360 SSTATRDRIAGFGGAPNMGSDARGRRHASTAWLKAGREA-ATPGEMPRGRKLVVQMVETF 418 Query: 426 REHMQPAFVEKLDAWQLGEQAKMPIPPVMIYGDDVTHILTEEGIANLLLCRTEEEREQAI 485 REHM PAFV+KLDAW+L E+A MP+PPVMIYGDDV+H+LTEEGIANLLLCRT EEREQAI Sbjct: 419 REHMAPAFVDKLDAWELAERANMPLPPVMIYGDDVSHVLTEEGIANLLLCRTPEEREQAI 478 Query: 486 RGVAGYTAVGMGRDRRMVENLRDRGIIRRAEDLGIDKRMATRDLLAAKNMKDLVRASGGL 545 RGV+GYTAVG+GRDRRMVENLRDRG+I+R +DLGI R ATRDLLAA+ +KDLVR SGGL Sbjct: 479 RGVSGYTAVGLGRDRRMVENLRDRGVIKRPDDLGIRPRDATRDLLAARTVKDLVRWSGGL 538 Query: 546 YNPPKRFRNW 555 Y+PPKRFRNW Sbjct: 539 YDPPKRFRNW 548 >gb|AEL08803.1| alpha subunit of malonate decarboxylase [Xanthomonas campestris pv. raphani 756C] Length = 582 Score = 895 bits (2313), Expect = 0.0, Method: Compositional matrix adjust. Identities = 433/551 (78%), Positives = 483/551 (87%), Gaps = 6/551 (1%) Query: 6 RVWNARQKNREQRLARATAVLGSQLQGKIAPADKLADLLYAVLENGDRVCVEGNNQKQAD 65 R W+ + ++R QRL RA A+ +G++ AD + LL AV+E GDRVC+EGNNQKQAD Sbjct: 37 RQWDTQAESRRQRLQRAAALAP---RGRVVAADDVVALLEAVIEPGDRVCLEGNNQKQAD 93 Query: 66 FLAKGLAALDPARVNGLHMLFSVLALPEHLDVFEKGIADRLDFSFSGPQAGRLAKLASAG 125 FLA+ L +DPARV+ LHM+ SVL+LP HLDVFE+GIA RLDFSFSGPQA RLA L S G Sbjct: 94 FLARCLTEVDPARVHDLHMVQSVLSLPAHLDVFERGIAKRLDFSFSGPQAARLAGLVSEG 153 Query: 126 KLNIGAIHTYLELFGRYFVDLTPRVALVAAQAADRHGNLYTGPNTEDTPAIAEATAFSSG 185 ++ IGAIHTYLELFGRYF+DLTPR+ALV AQAADRHGNLYTGPNTEDTP I EATAF G Sbjct: 154 RIEIGAIHTYLELFGRYFIDLTPRIALVTAQAADRHGNLYTGPNTEDTPVIVEATAFKGG 213 Query: 186 IVIAQVNEIVDELPRVDIPADWVGFAIKAPTPHYIEPLFTRDPAQISEIQVLMAMMAIKG 245 IVIAQVNEI+D LPRVDIPADWV F AP P+YIEPLFTRDPAQISEIQVLMAMMAIKG Sbjct: 214 IVIAQVNEILDTLPRVDIPADWVDFVTHAPKPNYIEPLFTRDPAQISEIQVLMAMMAIKG 273 Query: 246 IYAEYGVQRLNHGIGFDTAAIELILPTYAESLGLRGKICKHWALNPHPALIPAIEAGFVE 305 IYAEYGV RLNHGIGFDTAAIEL+LPTYAESLGL+GKIC+HWALNPHPALIPAIE+GFV+ Sbjct: 274 IYAEYGVDRLNHGIGFDTAAIELLLPTYAESLGLKGKICRHWALNPHPALIPAIESGFVQ 333 Query: 306 SVHSFGSELGMEDYIRARPDIFFVGPDGSMRSNRAFSQTAGHYGCDMFIGSTLQIDLQGN 365 SVHSFGSELGME YI ARPD+FF G DGSMRSNRA SQTAG Y CDMFIGSTLQIDLQGN Sbjct: 334 SVHSFGSELGMEKYIAARPDVFFTGADGSMRSNRALSQTAGLYACDMFIGSTLQIDLQGN 393 Query: 366 SSTATLGRIAGFGGAPNMGADARGRRHASEAWLKAGQQ-ARAGRHTIPRGQKLVVQTVET 424 SSTAT RIAGFGGAPNMG+DARGRRHAS AWLKAG++ AR G +PRG+KLVVQ VET Sbjct: 394 SSTATRDRIAGFGGAPNMGSDARGRRHASAAWLKAGREAARPGE--MPRGRKLVVQMVET 451 Query: 425 FREHMQPAFVEKLDAWQLGEQAKMPIPPVMIYGDDVTHILTEEGIANLLLCRTEEEREQA 484 FREHM PAFV+KLDAW+L E+A +P+PPVMIYGDDV+H+LTEEGIANLLLCRT EEREQA Sbjct: 452 FREHMAPAFVDKLDAWELAERANLPLPPVMIYGDDVSHVLTEEGIANLLLCRTPEEREQA 511 Query: 485 IRGVAGYTAVGMGRDRRMVENLRDRGIIRRAEDLGIDKRMATRDLLAAKNMKDLVRASGG 544 IRGV+GYTAVG+GRD+RMVENLRDRG+I+R +DLGI R ATRDLLAA+ +KDLVR SGG Sbjct: 512 IRGVSGYTAVGLGRDKRMVENLRDRGVIKRPDDLGIRPRDATRDLLAARTVKDLVRWSGG 571 Query: 545 LYNPPKRFRNW 555 LY+PPKRFRNW Sbjct: 572 LYDPPKRFRNW 582 >ref|ZP_08185225.1| malonate decarboxylase, alpha subunit [Xanthomonas gardneri ATCC 19865] gb|EGD17163.1| malonate decarboxylase, alpha subunit [Xanthomonas gardneri ATCC 19865] Length = 548 Score = 895 bits (2313), Expect = 0.0, Method: Compositional matrix adjust. Identities = 435/551 (78%), Positives = 481/551 (87%), Gaps = 6/551 (1%) Query: 6 RVWNARQKNREQRLARATAVLGSQLQGKIAPADKLADLLYAVLENGDRVCVEGNNQKQAD 65 R W+ + ++R QRL RA + QG++ A + LL AV+E GDRVC+EGNNQKQAD Sbjct: 3 RQWDTQAESRRQRLQRAAPLAP---QGRVVAASDVVALLEAVIEPGDRVCLEGNNQKQAD 59 Query: 66 FLAKGLAALDPARVNGLHMLFSVLALPEHLDVFEKGIADRLDFSFSGPQAGRLAKLASAG 125 FLA+ L +DPARV+ LHM+ SVL+LP HLDVFE+GIA RLDFSFSGPQA RLA L S G Sbjct: 60 FLARCLTEVDPARVHDLHMVQSVLSLPAHLDVFERGIAKRLDFSFSGPQAARLAGLVSEG 119 Query: 126 KLNIGAIHTYLELFGRYFVDLTPRVALVAAQAADRHGNLYTGPNTEDTPAIAEATAFSSG 185 ++ IGAIHTYLELFGRYF+DLTPR+ALV AQAADRHGNLYTGPNTEDTP I EATAF SG Sbjct: 120 RIEIGAIHTYLELFGRYFIDLTPRIALVTAQAADRHGNLYTGPNTEDTPVIVEATAFKSG 179 Query: 186 IVIAQVNEIVDELPRVDIPADWVGFAIKAPTPHYIEPLFTRDPAQISEIQVLMAMMAIKG 245 IVIAQVNEIVD LPRVDIPADWV F +AP P++IEPLFTRDPAQISEIQVLMAMMAIKG Sbjct: 180 IVIAQVNEIVDTLPRVDIPADWVDFVTQAPKPNHIEPLFTRDPAQISEIQVLMAMMAIKG 239 Query: 246 IYAEYGVQRLNHGIGFDTAAIELILPTYAESLGLRGKICKHWALNPHPALIPAIEAGFVE 305 IYAEYGV RLNHGIGFDTAAIEL+LPTYAESLGL+GKIC+HWALNPHPALIPAIE+GFVE Sbjct: 240 IYAEYGVNRLNHGIGFDTAAIELLLPTYAESLGLKGKICRHWALNPHPALIPAIESGFVE 299 Query: 306 SVHSFGSELGMEDYIRARPDIFFVGPDGSMRSNRAFSQTAGHYGCDMFIGSTLQIDLQGN 365 SVHSFGSELGME YI ARPDIFF G DGSMRSNRA SQTAG Y CDMFIGSTLQIDLQGN Sbjct: 300 SVHSFGSELGMEQYIAARPDIFFTGADGSMRSNRALSQTAGLYACDMFIGSTLQIDLQGN 359 Query: 366 SSTATLGRIAGFGGAPNMGADARGRRHASEAWLKAG-QQARAGRHTIPRGQKLVVQTVET 424 SSTAT RIAGFGGAPNMG+DARGRRHAS+AWLKAG + AR G +PRG+KLVVQ VET Sbjct: 360 SSTATRDRIAGFGGAPNMGSDARGRRHASDAWLKAGLEAARPGE--MPRGRKLVVQMVET 417 Query: 425 FREHMQPAFVEKLDAWQLGEQAKMPIPPVMIYGDDVTHILTEEGIANLLLCRTEEEREQA 484 FREHM PAFV+KLDAW+L E+A MP+PPVMIYGDDV+H+LTEEGIANLLLCRT EEREQA Sbjct: 418 FREHMAPAFVDKLDAWELAERANMPLPPVMIYGDDVSHVLTEEGIANLLLCRTPEEREQA 477 Query: 485 IRGVAGYTAVGMGRDRRMVENLRDRGIIRRAEDLGIDKRMATRDLLAAKNMKDLVRASGG 544 IRGV+GYTAVG+GRD+R VENLRDRG+I+R EDLGI R ATRDLLAA+ +KDLV SGG Sbjct: 478 IRGVSGYTAVGLGRDKRAVENLRDRGVIKRPEDLGIRPRDATRDLLAARTVKDLVSWSGG 537 Query: 545 LYNPPKRFRNW 555 LY+PPKRFRNW Sbjct: 538 LYDPPKRFRNW 548