BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.0023.p (222 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776091.1| GntR family transcription regulator protein ... 449 e-124 ref|YP_004752359.1| putative GntR-family transcription regulator... 336 1e-90 ref|YP_001354254.1| GntR family transcriptional regulator [Janth... 336 2e-90 ref|ZP_08276091.1| Transcriptional regulator, GntR family [Oxalo... 334 5e-90 ref|YP_001099763.1| GntR family transcriptional regulator [Hermi... 324 7e-87 ref|ZP_08275022.1| Transcriptional regulator, GntR family [Oxalo... 307 9e-82 ref|YP_001022087.1| GntR family transcriptional regulator [Methy... 283 1e-74 ref|YP_001789121.1| GntR family transcriptional regulator [Lepto... 278 3e-73 ref|YP_287221.1| GntR family transcriptional regulator [Dechloro... 275 4e-72 ref|YP_001888383.1| GntR family transcriptional regulator [Burkh... 263 2e-68 >ref|YP_003776091.1| GntR family transcription regulator protein [Herbaspirillum seropedicae SmR1] gb|ADJ64183.1| GntR family transcription regulator protein [Herbaspirillum seropedicae SmR1] Length = 222 Score = 449 bits (1154), Expect = e-124, Method: Compositional matrix adjust. Identities = 222/222 (100%), Positives = 222/222 (100%) Query: 1 MDTPKTRAEALRESIEELIAVSKLSPGQHLDETSLAEEFGVSRTPIREALIQLASMGIVE 60 MDTPKTRAEALRESIEELIAVSKLSPGQHLDETSLAEEFGVSRTPIREALIQLASMGIVE Sbjct: 1 MDTPKTRAEALRESIEELIAVSKLSPGQHLDETSLAEEFGVSRTPIREALIQLASMGIVE 60 Query: 61 MRPRRGAIVAEIGPQQLIEMFEVMAEFEAMCGRLAARRMTPAEHAELLAAHQACQAARDA 120 MRPRRGAIVAEIGPQQLIEMFEVMAEFEAMCGRLAARRMTPAEHAELLAAHQACQAARDA Sbjct: 61 MRPRRGAIVAEIGPQQLIEMFEVMAEFEAMCGRLAARRMTPAEHAELLAAHQACQAARDA 120 Query: 121 NDPDAYFYLNEAFHDHIYAGSHNGFLADQARALHRRLRPYRRLQLRVRDRLKSSFDEHQA 180 NDPDAYFYLNEAFHDHIYAGSHNGFLADQARALHRRLRPYRRLQLRVRDRLKSSFDEHQA Sbjct: 121 NDPDAYFYLNEAFHDHIYAGSHNGFLADQARALHRRLRPYRRLQLRVRDRLKSSFDEHQA 180 Query: 181 VVDAIISGDAEKTVDLLREHIMIQGQRFADLVASLHQLKSAA 222 VVDAIISGDAEKTVDLLREHIMIQGQRFADLVASLHQLKSAA Sbjct: 181 VVDAIISGDAEKTVDLLREHIMIQGQRFADLVASLHQLKSAA 222 >ref|YP_004752359.1| putative GntR-family transcription regulator [Collimonas fungivorans Ter331] gb|AEK61536.1| putative GntR-family transcription regulator [Collimonas fungivorans Ter331] Length = 314 Score = 336 bits (862), Expect = 1e-90, Method: Compositional matrix adjust. Identities = 161/220 (73%), Positives = 183/220 (83%) Query: 1 MDTPKTRAEALRESIEELIAVSKLSPGQHLDETSLAEEFGVSRTPIREALIQLASMGIVE 60 M T K R+E+LRE+IEE+IAV + PGQHLDET LA +FGVSRTP+REALIQLASMGIV Sbjct: 86 MLTTKNRSESLRETIEEMIAVGEFRPGQHLDETDLAIKFGVSRTPVREALIQLASMGIVV 145 Query: 61 MRPRRGAIVAEIGPQQLIEMFEVMAEFEAMCGRLAARRMTPAEHAELLAAHQACQAARDA 120 RPRRG +VAEIGP+QL+EMFEVMAE EAMCGRLAARRM+ EHA LLAAHQAC ARDA Sbjct: 146 TRPRRGTVVAEIGPRQLVEMFEVMAELEAMCGRLAARRMSGEEHASLLAAHQACMEARDA 205 Query: 121 NDPDAYFYLNEAFHDHIYAGSHNGFLADQARALHRRLRPYRRLQLRVRDRLKSSFDEHQA 180 DPD YFY+NEAFH IY GSHN FLA QA++L RRLRPYRRLQLRVRDRLK S+ EH Sbjct: 206 QDPDTYFYMNEAFHGAIYEGSHNAFLAAQAQSLQRRLRPYRRLQLRVRDRLKVSYQEHDG 265 Query: 181 VVDAIISGDAEKTVDLLREHIMIQGQRFADLVASLHQLKS 220 VV AII+GD+E DLLR+H+ +QGQRF DL+ASL QL + Sbjct: 266 VVQAIIAGDSELAADLLRQHVTVQGQRFVDLIASLQQLTA 305 >ref|YP_001354254.1| GntR family transcriptional regulator [Janthinobacterium sp. Marseille] gb|ABR89258.1| transcriptional regulator, GntR family [Janthinobacterium sp. Marseille] Length = 229 Score = 336 bits (861), Expect = 2e-90, Method: Compositional matrix adjust. Identities = 166/221 (75%), Positives = 181/221 (81%) Query: 2 DTPKTRAEALRESIEELIAVSKLSPGQHLDETSLAEEFGVSRTPIREALIQLASMGIVEM 61 D +TR+E LRE IEE+IAV L PGQHLDET LAE FGVSRTPIREALIQLASMGIV + Sbjct: 9 DNTQTRSETLREQIEEMIAVGTLKPGQHLDETVLAERFGVSRTPIREALIQLASMGIVVI 68 Query: 62 RPRRGAIVAEIGPQQLIEMFEVMAEFEAMCGRLAARRMTPAEHAELLAAHQACQAARDAN 121 RPRRGAIVAEIGPQQLIEMFEVMAE EAMC RLAARRM+PAEHA L+A H AC+ ARD Sbjct: 69 RPRRGAIVAEIGPQQLIEMFEVMAELEAMCARLAARRMSPAEHAILMATHLACKQARDDA 128 Query: 122 DPDAYFYLNEAFHDHIYAGSHNGFLADQARALHRRLRPYRRLQLRVRDRLKSSFDEHQAV 181 D DAYFY NE FH IY GS N FL +QARAL RRLRPYRRLQLRVR+R+ +SFDEH AV Sbjct: 129 DSDAYFYKNEEFHQQIYIGSKNTFLEEQARALQRRLRPYRRLQLRVRNRVTASFDEHGAV 188 Query: 182 VDAIISGDAEKTVDLLREHIMIQGQRFADLVASLHQLKSAA 222 VDAII G + +LLR+HIMIQGQRF+DLVASL L S A Sbjct: 189 VDAIIEGKGDLAAELLRQHIMIQGQRFSDLVASLSALNSEA 229 >ref|ZP_08276091.1| Transcriptional regulator, GntR family [Oxalobacteraceae bacterium IMCC9480] gb|EGF30438.1| Transcriptional regulator, GntR family [Oxalobacteraceae bacterium IMCC9480] Length = 237 Score = 334 bits (857), Expect = 5e-90, Method: Compositional matrix adjust. Identities = 159/224 (70%), Positives = 186/224 (83%), Gaps = 4/224 (1%) Query: 1 MDTP----KTRAEALRESIEELIAVSKLSPGQHLDETSLAEEFGVSRTPIREALIQLASM 56 M+TP K R+ +LRE+IEE+IA+ +L PG HLDET LA F VSRTPIREALIQLASM Sbjct: 1 MNTPNNPAKNRSSSLREAIEEMIAIGELPPGAHLDETVLANRFEVSRTPIREALIQLASM 60 Query: 57 GIVEMRPRRGAIVAEIGPQQLIEMFEVMAEFEAMCGRLAARRMTPAEHAELLAAHQACQA 116 G++ +RPRRGA+VAEI PQQL+EMFEVM+EFEAMCGRLAARRMTP EH +L AH AC+ Sbjct: 61 GLIVIRPRRGAVVAEISPQQLVEMFEVMSEFEAMCGRLAARRMTPGEHQVMLTAHHACEQ 120 Query: 117 ARDANDPDAYFYLNEAFHDHIYAGSHNGFLADQARALHRRLRPYRRLQLRVRDRLKSSFD 176 ARDA DPDAYFY NEAFH +Y GSHN FL +QA ALHRRLRPYRRLQLRVR+R+ +SF+ Sbjct: 121 ARDAQDPDAYFYKNEAFHAALYKGSHNTFLTEQALALHRRLRPYRRLQLRVRNRIANSFN 180 Query: 177 EHQAVVDAIISGDAEKTVDLLREHIMIQGQRFADLVASLHQLKS 220 EH+A+V+AII+GD E T LLR HIMIQGQRFADL+ASL L + Sbjct: 181 EHEAIVNAIIAGDGEMTATLLRNHIMIQGQRFADLIASLPLLST 224 >ref|YP_001099763.1| GntR family transcriptional regulator [Herminiimonas arsenicoxydans] emb|CAL61636.1| Transcriptional regulatory proteins, GntR family [Herminiimonas arsenicoxydans] Length = 220 Score = 324 bits (830), Expect = 7e-87, Method: Compositional matrix adjust. Identities = 158/211 (74%), Positives = 175/211 (82%) Query: 5 KTRAEALRESIEELIAVSKLSPGQHLDETSLAEEFGVSRTPIREALIQLASMGIVEMRPR 64 K +E LRE+IEE+IAV KL PG HLDET LA+EFGVSRTPIREALIQLASMGI+ +RPR Sbjct: 2 KKHSEVLREAIEEMIAVGKLPPGHHLDETELAKEFGVSRTPIREALIQLASMGIIVIRPR 61 Query: 65 RGAIVAEIGPQQLIEMFEVMAEFEAMCGRLAARRMTPAEHAELLAAHQACQAARDANDPD 124 RGAIVAEIGPQQLIEMFEVMAE EAMC RLAARRM+PA HA L A H AC+ ARD+ D D Sbjct: 62 RGAIVAEIGPQQLIEMFEVMAELEAMCARLAARRMSPAGHATLKATHLACEEARDSADSD 121 Query: 125 AYFYLNEAFHDHIYAGSHNGFLADQARALHRRLRPYRRLQLRVRDRLKSSFDEHQAVVDA 184 AYFY NE FH IY GS N FL +QAR L RRLRPYRRLQLRVR+R+++SFDEH AVVDA Sbjct: 122 AYFYKNEEFHQQIYIGSQNSFLEEQARVLQRRLRPYRRLQLRVRNRVQASFDEHGAVVDA 181 Query: 185 IISGDAEKTVDLLREHIMIQGQRFADLVASL 215 II G E +LLR+HIMIQGQRF DL+ASL Sbjct: 182 IIEGKGELAAELLRQHIMIQGQRFTDLIASL 212 >ref|ZP_08275022.1| Transcriptional regulator, GntR family [Oxalobacteraceae bacterium IMCC9480] gb|EGF31507.1| Transcriptional regulator, GntR family [Oxalobacteraceae bacterium IMCC9480] Length = 221 Score = 307 bits (786), Expect = 9e-82, Method: Compositional matrix adjust. Identities = 156/214 (72%), Positives = 185/214 (86%) Query: 5 KTRAEALRESIEELIAVSKLSPGQHLDETSLAEEFGVSRTPIREALIQLASMGIVEMRPR 64 K R+E LRESIEE+IA+ +L PGQHLDE +LA +FGVSRTPIREAL QL SMGIV MRPR Sbjct: 2 KNRSETLRESIEEMIAIGELLPGQHLDEVTLAAQFGVSRTPIREALNQLMSMGIVVMRPR 61 Query: 65 RGAIVAEIGPQQLIEMFEVMAEFEAMCGRLAARRMTPAEHAELLAAHQACQAARDANDPD 124 RGA+VA+IGPQQLIEMFEVMAEFEA+CGRLAARRM+ +HA LLAAHQAC+ ARD PD Sbjct: 62 RGAVVADIGPQQLIEMFEVMAEFEALCGRLAARRMSAPDHAALLAAHQACKDARDNATPD 121 Query: 125 AYFYLNEAFHDHIYAGSHNGFLADQARALHRRLRPYRRLQLRVRDRLKSSFDEHQAVVDA 184 YF+ NEAFH+ IYAGS N FLA+QARALHRRLRPYRRLQLRVR+R ++S+DEH+ +V A Sbjct: 122 EYFFRNEAFHEQIYAGSRNAFLAEQARALHRRLRPYRRLQLRVRNRTRASYDEHEQIVQA 181 Query: 185 IISGDAEKTVDLLREHIMIQGQRFADLVASLHQL 218 II+G+ + V+LLR+HI +QGQRFADLVA+L +L Sbjct: 182 IIAGNGDLAVELLRQHITVQGQRFADLVAALPKL 215 >ref|YP_001022087.1| GntR family transcriptional regulator [Methylibium petroleiphilum PM1] gb|ABM95852.1| transcriptional regulator, GntR family [Methylibium petroleiphilum PM1] Length = 226 Score = 283 bits (725), Expect = 1e-74, Method: Compositional matrix adjust. Identities = 134/212 (63%), Positives = 171/212 (80%) Query: 11 LRESIEELIAVSKLSPGQHLDETSLAEEFGVSRTPIREALIQLASMGIVEMRPRRGAIVA 70 LR+ IEE IA +L+PG LDE +L E GVSRTP+REALIQL++ G++E+RPRRGA+VA Sbjct: 14 LRDLIEEQIATGELAPGSTLDEATLVERHGVSRTPVREALIQLSAEGLIELRPRRGAVVA 73 Query: 71 EIGPQQLIEMFEVMAEFEAMCGRLAARRMTPAEHAELLAAHQACQAARDANDPDAYFYLN 130 IGP +LIEMFEVM+E EAMCGRLAARRMT E AEL+ AHQAC+ AR +DP+AY+ N Sbjct: 74 AIGPARLIEMFEVMSELEAMCGRLAARRMTDKERAELVRAHQACEQARSDSDPEAYYLCN 133 Query: 131 EAFHDHIYAGSHNGFLADQARALHRRLRPYRRLQLRVRDRLKSSFDEHQAVVDAIISGDA 190 E FH +Y GSHNGFL +QA++L+RRLRPYRRLQLRVR+R+ +SF EH A+V A+++GDA Sbjct: 134 ERFHFALYEGSHNGFLNEQAQSLNRRLRPYRRLQLRVRNRMNTSFAEHDAIVRAVLAGDA 193 Query: 191 EKTVDLLREHIMIQGQRFADLVASLHQLKSAA 222 E + LR H+++QG+RF DL+ASL +L AA Sbjct: 194 EAAANTLRAHVVVQGERFGDLLASLAELAPAA 225 >ref|YP_001789121.1| GntR family transcriptional regulator [Leptothrix cholodnii SP-6] gb|ACB32356.1| transcriptional regulator, GntR family [Leptothrix cholodnii SP-6] Length = 240 Score = 278 bits (712), Expect = 3e-73, Method: Compositional matrix adjust. Identities = 136/211 (64%), Positives = 168/211 (79%) Query: 11 LRESIEELIAVSKLSPGQHLDETSLAEEFGVSRTPIREALIQLASMGIVEMRPRRGAIVA 70 LRE+IEE IA +L+PG LDE L E GVSRTP+REALIQLA+ G+VE+RPRRGA+VA Sbjct: 7 LRETIEEQIATGELAPGSALDEALLVERHGVSRTPVREALIQLAAEGLVELRPRRGAVVA 66 Query: 71 EIGPQQLIEMFEVMAEFEAMCGRLAARRMTPAEHAELLAAHQACQAARDANDPDAYFYLN 130 +GP +LIEMFEVMAE EAMC R AARR T A+ A + AAH+ C++A DPDAYFY N Sbjct: 67 ALGPTRLIEMFEVMAELEAMCARQAARRATEADLAAIQAAHERCRSAAGELDPDAYFYAN 126 Query: 131 EAFHDHIYAGSHNGFLADQARALHRRLRPYRRLQLRVRDRLKSSFDEHQAVVDAIISGDA 190 E FH IY +HN FLA+QA+AL R+LRPYRRLQLRVR+RL+ SF+EHQ +VDAI +GDA Sbjct: 127 EGFHRAIYDSAHNAFLAEQAQALQRKLRPYRRLQLRVRNRLQRSFEEHQGIVDAIRNGDA 186 Query: 191 EKTVDLLREHIMIQGQRFADLVASLHQLKSA 221 E V+ +R H+++QG+RFADL+A L QL+SA Sbjct: 187 ELAVNAVRNHVIVQGERFADLLAGLRQLESA 217 >ref|YP_287221.1| GntR family transcriptional regulator [Dechloromonas aromatica RCB] gb|AAZ48751.1| transcriptional regulator, GntR family [Dechloromonas aromatica RCB] Length = 239 Score = 275 bits (703), Expect = 4e-72, Method: Compositional matrix adjust. Identities = 133/215 (61%), Positives = 162/215 (75%) Query: 7 RAEALRESIEELIAVSKLSPGQHLDETSLAEEFGVSRTPIREALIQLASMGIVEMRPRRG 66 ++E L E IEE I PG LDE LA FGVSRTP+REALIQLAS+G++E+RPRRG Sbjct: 24 QSERLGELIEERIVTGTYPPGTRLDEQELASTFGVSRTPVREALIQLASIGLIEIRPRRG 83 Query: 67 AIVAEIGPQQLIEMFEVMAEFEAMCGRLAARRMTPAEHAELLAAHQACQAARDANDPDAY 126 A V EIG ++ EMFEVMAE EAMCGRLAARR+T +E L AH+AC+AARDA+ PD Y Sbjct: 84 ATVPEIGADRVCEMFEVMAELEAMCGRLAARRITASEQLALQEAHRACEAARDADTPDIY 143 Query: 127 FYLNEAFHDHIYAGSHNGFLADQARALHRRLRPYRRLQLRVRDRLKSSFDEHQAVVDAII 186 + LNE FH IY SHNGFL +QA ALHRRLRPYRRLQLRVR+R+ +SF+EH A+V+AI Sbjct: 144 YQLNEVFHQRIYEASHNGFLVEQATALHRRLRPYRRLQLRVRNRMATSFNEHLAIVEAIN 203 Query: 187 SGDAEKTVDLLREHIMIQGQRFADLVASLHQLKSA 221 GD++ LLR H+ +QG+RFADLVA+L + Sbjct: 204 KGDSDLAAALLRAHVTVQGERFADLVATLRDFNAG 238 >ref|YP_001888383.1| GntR family transcriptional regulator [Burkholderia phytofirmans PsJN] gb|ACD19013.1| transcriptional regulator, GntR family [Burkholderia phytofirmans PsJN] Length = 221 Score = 263 bits (671), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 138/220 (62%), Positives = 161/220 (73%) Query: 1 MDTPKTRAEALRESIEELIAVSKLSPGQHLDETSLAEEFGVSRTPIREALIQLASMGIVE 60 M T A+ LRESIEE IA L PG LDE L F VSRTP+REAL+QLA+ G+VE Sbjct: 1 MTNKLTLADQLRESIEEAIATGDLPPGAPLDEAELIARFEVSRTPVREALLQLAAAGMVE 60 Query: 61 MRPRRGAIVAEIGPQQLIEMFEVMAEFEAMCGRLAARRMTPAEHAELLAAHQACQAARDA 120 MRPR GA+VA+I +LIEMFEVMAE EAMC RLAARRM E L AH ACQ ARDA Sbjct: 61 MRPRHGAVVAKISLHRLIEMFEVMAELEAMCSRLAARRMNAQELQTLREAHVACQKARDA 120 Query: 121 NDPDAYFYLNEAFHDHIYAGSHNGFLADQARALHRRLRPYRRLQLRVRDRLKSSFDEHQA 180 PD YF+LNE FH IY GSHN FL DQA+ALH+ LRPYRRLQLRV+ R+ +SFDEHQA Sbjct: 121 GSPDEYFHLNERFHCLIYQGSHNSFLHDQAKALHKLLRPYRRLQLRVKGRVAASFDEHQA 180 Query: 181 VVDAIISGDAEKTVDLLREHIMIQGQRFADLVASLHQLKS 220 VVDA+ +GD E LR HI++QG+RF DL+A+L Q+ + Sbjct: 181 VVDALEAGDGEAAAAALRGHILVQGERFGDLIAALAQVSA 220