BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.0015.p (123 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776101.1| hypothetical protein Hsero_2697 [Herbaspiril... 253 7e-66 ref|YP_001355195.1| hypothetical protein mma_3505 [Janthinobacte... 153 6e-36 ref|YP_001101505.1| hypothetical protein HEAR3277 [Herminiimonas... 149 2e-34 ref|YP_775619.1| hypothetical protein Bamb_3731 [Burkholderia am... 141 3e-32 ref|YP_001810885.1| hypothetical protein BamMC406_4205 [Burkhold... 141 3e-32 ref|ZP_02893171.1| Secreted repeat of unknown function [Burkhold... 141 4e-32 gb|EFV87229.1| secreted repeat protein [Achromobacter xylosoxida... 140 7e-32 ref|ZP_02909250.1| Secreted protein of unknown function [Burkhol... 140 9e-32 ref|YP_001117286.1| hypothetical protein Bcep1808_4864 [Burkhold... 136 1e-30 ref|ZP_06689552.1| conserved hypothetical protein [Achromobacter... 131 3e-29 >ref|YP_003776101.1| hypothetical protein Hsero_2697 [Herbaspirillum seropedicae SmR1] gb|ADJ64193.1| exported protein [Herbaspirillum seropedicae SmR1] Length = 123 Score = 253 bits (646), Expect = 7e-66, Method: Compositional matrix adjust. Identities = 123/123 (100%), Positives = 123/123 (100%) Query: 1 MRLLATSLLALACASASVTALAQGAGVKAMDGILVDAHGMTVYTFDKDTPNNGKSVCNGP 60 MRLLATSLLALACASASVTALAQGAGVKAMDGILVDAHGMTVYTFDKDTPNNGKSVCNGP Sbjct: 1 MRLLATSLLALACASASVTALAQGAGVKAMDGILVDAHGMTVYTFDKDTPNNGKSVCNGP 60 Query: 61 CAKLWPPVAPMGSPAAPYSTVTRDDGSAQLAYQGKPLYLYEQDKKPGDRAGDNFKDVWHV 120 CAKLWPPVAPMGSPAAPYSTVTRDDGSAQLAYQGKPLYLYEQDKKPGDRAGDNFKDVWHV Sbjct: 61 CAKLWPPVAPMGSPAAPYSTVTRDDGSAQLAYQGKPLYLYEQDKKPGDRAGDNFKDVWHV 120 Query: 121 VKP 123 VKP Sbjct: 121 VKP 123 >ref|YP_001355195.1| hypothetical protein mma_3505 [Janthinobacterium sp. Marseille] gb|ABR90289.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille] Length = 124 Score = 153 bits (387), Expect = 6e-36, Method: Compositional matrix adjust. Identities = 77/123 (62%), Positives = 87/123 (70%), Gaps = 1/123 (0%) Query: 1 MRLLATSLLALACASASVTALAQGAGVKAMDGILVDAHGMTVYTFDKDTPNNGKSVCNGP 60 M+L L A+A S +A AQ VK DGILV GMTVYTFDKD ++GKS CNGP Sbjct: 1 MKLSQIVLSAVAAVVLSGSAYAQSVPVKKADGILVTTSGMTVYTFDKDVADSGKSACNGP 60 Query: 61 CAKLWPPVAPMGSPA-APYSTVTRDDGSAQLAYQGKPLYLYEQDKKPGDRAGDNFKDVWH 119 CA WPPV+ A APYS VTRDDG+ QLAY+GKPLYL+ DKK GDR GDNFKD+WH Sbjct: 61 CATAWPPVSAKDVKASAPYSVVTRDDGTPQLAYKGKPLYLFASDKKAGDRTGDNFKDIWH 120 Query: 120 VVK 122 VVK Sbjct: 121 VVK 123 >ref|YP_001101505.1| hypothetical protein HEAR3277 [Herminiimonas arsenicoxydans] emb|CAL63384.1| Conserved hypothetical protein [Herminiimonas arsenicoxydans] Length = 124 Score = 149 bits (375), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 75/121 (61%), Positives = 88/121 (72%), Gaps = 4/121 (3%) Query: 3 LLATSLLALACASASVTALAQGAGVKAMDGILVDAHGMTVYTFDKDTPNNGKSVCNGPCA 62 +L +++ AL +SAS AQ VK +DGILV + GMTVYTFDKD ++GKS CNGPC Sbjct: 6 ILFSAIAALLLSSAS---FAQTVPVKKVDGILVTSTGMTVYTFDKDVADSGKSTCNGPCT 62 Query: 63 KLWPPVAPMG-SPAAPYSTVTRDDGSAQLAYQGKPLYLYEQDKKPGDRAGDNFKDVWHVV 121 WPPV+ P PYS VTRDDGSAQLAY+GKPLYL+ DKK GDR GDN KD+WHVV Sbjct: 63 ANWPPVSAKDVKPTPPYSIVTRDDGSAQLAYKGKPLYLFAADKKAGDRNGDNVKDIWHVV 122 Query: 122 K 122 K Sbjct: 123 K 123 >ref|YP_775619.1| hypothetical protein Bamb_3731 [Burkholderia ambifaria AMMD] gb|ABI89285.1| Secreted repeat of unknown function [Burkholderia ambifaria AMMD] Length = 124 Score = 141 bits (356), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 70/123 (56%), Positives = 87/123 (70%), Gaps = 6/123 (4%) Query: 3 LLATSLLALACASASVTALAQGAGVKAMDGILVDAHGMTVYTFDKDTPNNGKSVCNGPCA 62 L+++++LA+A SV+A AQG+ K +G LV A+GMTVY FDKD PN G S C+GPC Sbjct: 6 LVSSAVLAMA----SVSASAQGSITKVENGALVAANGMTVYAFDKDKPNAGTSACSGPCE 61 Query: 63 KLWPPVAPMGS--PAAPYSTVTRDDGSAQLAYQGKPLYLYEQDKKPGDRAGDNFKDVWHV 120 LWPP + PA PY+ V RDDGS Q AY+GKPLY + +D K GDR GDNFK+VWHV Sbjct: 62 TLWPPYKASATDVPAGPYTIVKRDDGSPQWAYKGKPLYFFSKDMKQGDRNGDNFKNVWHV 121 Query: 121 VKP 123 V P Sbjct: 122 VAP 124 >ref|YP_001810885.1| hypothetical protein BamMC406_4205 [Burkholderia ambifaria MC40-6] gb|ACB66669.1| Secreted repeat of unknown function [Burkholderia ambifaria MC40-6] Length = 124 Score = 141 bits (355), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 69/123 (56%), Positives = 87/123 (70%), Gaps = 6/123 (4%) Query: 3 LLATSLLALACASASVTALAQGAGVKAMDGILVDAHGMTVYTFDKDTPNNGKSVCNGPCA 62 L+++++LA+A S++A AQG+ K +G LV A+GMTVY FDKD PN G S C+GPC Sbjct: 6 LVSSAVLAMA----SISASAQGSITKVENGALVAANGMTVYAFDKDKPNAGTSACSGPCE 61 Query: 63 KLWPPVAPMGS--PAAPYSTVTRDDGSAQLAYQGKPLYLYEQDKKPGDRAGDNFKDVWHV 120 LWPP + PA PY+ V RDDGS Q AY+GKPLY + +D K GDR GDNFK+VWHV Sbjct: 62 TLWPPYKASATDVPAGPYTIVKRDDGSPQWAYKGKPLYFFSKDMKQGDRNGDNFKNVWHV 121 Query: 121 VKP 123 V P Sbjct: 122 VAP 124 >ref|ZP_02893171.1| Secreted repeat of unknown function [Burkholderia ambifaria IOP40-10] gb|EDT01250.1| Secreted repeat of unknown function [Burkholderia ambifaria IOP40-10] Length = 316 Score = 141 bits (355), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 70/123 (56%), Positives = 84/123 (68%), Gaps = 5/123 (4%) Query: 3 LLATSLLALACASASVTALAQGAGVKAMDGILVDAHGMTVYTFDKDTPNNGKSVCNGPCA 62 LL +S++ A ASV+A AQG+ K +G LV A+GMTVY FDKD PN G S C+GPC Sbjct: 197 LLVSSVV---LAMASVSASAQGSITKVENGTLVAANGMTVYAFDKDKPNAGTSACSGPCE 253 Query: 63 KLWPPVAPMGS--PAAPYSTVTRDDGSAQLAYQGKPLYLYEQDKKPGDRAGDNFKDVWHV 120 LWPP + P PY+ V RDDGS Q AY+GKPLY + +D K GDR GDNFK+VWHV Sbjct: 254 TLWPPYKASATDVPVGPYTIVKRDDGSPQWAYKGKPLYFFSKDMKQGDRNGDNFKNVWHV 313 Query: 121 VKP 123 V P Sbjct: 314 VAP 316 >gb|EFV87229.1| secreted repeat protein [Achromobacter xylosoxidans C54] Length = 122 Score = 140 bits (353), Expect = 7e-32, Method: Compositional matrix adjust. Identities = 72/125 (57%), Positives = 85/125 (68%), Gaps = 5/125 (4%) Query: 1 MRLLATSLLALACASASVTALAQGAGVKAMDGILVDAHGMTVYTFDKDTPNNGKSVCNGP 60 MR + LAL+CA A +A A VK DGILV++ GMT+YTFDKD GKS CN Sbjct: 1 MRTQLAATLALSCA-ALFSAGAHAQAVKTQDGILVNSAGMTLYTFDKDA--GGKSACNDQ 57 Query: 61 CAKLWPPVAPMGSPAAP--YSTVTRDDGSAQLAYQGKPLYLYEQDKKPGDRAGDNFKDVW 118 CAK+WPPV A S +TRDDGS Q AY+GKP+YLY +D KPGD+ GDNFKDVW Sbjct: 58 CAKIWPPVTAAADAKASGDLSIITRDDGSKQWAYKGKPVYLYAKDAKPGDKTGDNFKDVW 117 Query: 119 HVVKP 123 HV+KP Sbjct: 118 HVIKP 122 >ref|ZP_02909250.1| Secreted protein of unknown function [Burkholderia ambifaria MEX-5] gb|EDT39623.1| Secreted protein of unknown function [Burkholderia ambifaria MEX-5] Length = 124 Score = 140 bits (352), Expect = 9e-32, Method: Compositional matrix adjust. Identities = 68/123 (55%), Positives = 86/123 (69%), Gaps = 6/123 (4%) Query: 3 LLATSLLALACASASVTALAQGAGVKAMDGILVDAHGMTVYTFDKDTPNNGKSVCNGPCA 62 L+++++LA+A SV+A AQG+ K +G L+ A+GMTVY FDKD PN G S C+GPC Sbjct: 6 LVSSAVLAMA----SVSASAQGSITKVENGALIAANGMTVYAFDKDKPNAGTSACSGPCE 61 Query: 63 KLWPPVAPMGS--PAAPYSTVTRDDGSAQLAYQGKPLYLYEQDKKPGDRAGDNFKDVWHV 120 LWPP + P PY+ V RDDGS Q AY+GKPLY + +D K GDR GDNFK+VWHV Sbjct: 62 TLWPPYKASATDVPVGPYTIVKRDDGSPQWAYKGKPLYFFSKDMKQGDRNGDNFKNVWHV 121 Query: 121 VKP 123 V P Sbjct: 122 VAP 124 >ref|YP_001117286.1| hypothetical protein Bcep1808_4864 [Burkholderia vietnamiensis G4] gb|ABO57821.1| Secreted repeat of unknown function [Burkholderia vietnamiensis G4] Length = 171 Score = 136 bits (342), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 68/123 (55%), Positives = 84/123 (68%), Gaps = 6/123 (4%) Query: 3 LLATSLLALACASASVTALAQGAGVKAMDGILVDAHGMTVYTFDKDTPNNGKSVCNGPCA 62 L++++LLA+A SV+A AQG+ K +G LV A+GMTVY FDKD PN G S C+G C Sbjct: 53 LVSSALLAMA----SVSASAQGSITKVENGALVAANGMTVYAFDKDKPNAGTSACSGQCE 108 Query: 63 KLWPPVAPMGS--PAAPYSTVTRDDGSAQLAYQGKPLYLYEQDKKPGDRAGDNFKDVWHV 120 LWPP + P PY+ V RDDGS Q AY+GKPLY + +D K GDR GDNFK+ WHV Sbjct: 109 ALWPPYKASATDVPVGPYTIVKRDDGSPQWAYKGKPLYFFSKDMKQGDRNGDNFKNAWHV 168 Query: 121 VKP 123 V P Sbjct: 169 VAP 171 >ref|ZP_06689552.1| conserved hypothetical protein [Achromobacter piechaudii ATCC 43553] gb|EFF73443.1| conserved hypothetical protein [Achromobacter piechaudii ATCC 43553] Length = 122 Score = 131 bits (330), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 70/125 (56%), Positives = 83/125 (66%), Gaps = 5/125 (4%) Query: 1 MRLLATSLLALACASASVTALAQGAGVKAMDGILVDAHGMTVYTFDKDTPNNGKSVCNGP 60 MR + L L A A TA A VK DG+LV++ GMT+YTFDKD+ GKS CN Sbjct: 1 MRKHIAAALVLGSA-ALFTAGAHAQAVKTQDGVLVNSAGMTLYTFDKDS--GGKSACNDQ 57 Query: 61 CAKLWPPV-APM-GSPAAPYSTVTRDDGSAQLAYQGKPLYLYEQDKKPGDRAGDNFKDVW 118 CAK+WPPV AP P + +TRDDGS Q AY+GKP+YLY +D KPGD+ GDNFKDVW Sbjct: 58 CAKIWPPVTAPADAKPMGDMTVITRDDGSKQWAYKGKPVYLYAKDAKPGDKTGDNFKDVW 117 Query: 119 HVVKP 123 H KP Sbjct: 118 HAAKP 122