BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0037.0172.p (65 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value D8ISD7.1 D8ISD7_HERSS 50S ribosomal protein L20 127 7e-28 A6SY33.1 RL20_JANMA 50S ribosomal protein L20 116 1e-24 A4G616.1 RL20_HERAR 50S ribosomal protein L20 112 1e-23 Q1LP77.1 RL20_RALME 50S ribosomal protein L20 111 3e-23 B3R4J4.1 RL20_CUPTR 50S ribosomal protein L20 111 3e-23 Q472N5.1 RL20_CUPPJ 50S ribosomal protein L20 111 3e-23 Q0KBZ0.1 RL20_CUPNH 50S ribosomal protein L20 111 3e-23 C6BJ05.1 C6BJ05_RALP1 50S ribosomal protein L20 111 3e-23 E2T3B3.1 E2T3B3_9RALS 50S ribosomal protein L20 111 4e-23 B2UGJ5.1 RL20_RALPJ 50S ribosomal protein L20 111 4e-23 >D8ISD7.1 D8ISD7_HERSS 50S ribosomal protein L20 Length = 120 Score = 127 bits (318), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 65/65 (100%), Positives = 65/65 (100%) Query: 1 VFRALWIARINAAARSHGVTYSVFMNGLKKAAIELDRKVLADMAVTDKAAFAAIVNQVKA 60 VFRALWIARINAAARSHGVTYSVFMNGLKKAAIELDRKVLADMAVTDKAAFAAIVNQVKA Sbjct: 56 VFRALWIARINAAARSHGVTYSVFMNGLKKAAIELDRKVLADMAVTDKAAFAAIVNQVKA 115 Query: 61 NIAAA 65 NIAAA Sbjct: 116 NIAAA 120 >A6SY33.1 RL20_JANMA 50S ribosomal protein L20 Length = 119 Score = 116 bits (290), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 56/64 (87%), Positives = 60/64 (93%) Query: 1 VFRALWIARINAAARSHGVTYSVFMNGLKKAAIELDRKVLADMAVTDKAAFAAIVNQVKA 60 VFRALWI RINAA+R HG+TYSVFMNGLK+A+IELDRKVLADMAV DK AFAAIVNQVKA Sbjct: 56 VFRALWITRINAASREHGLTYSVFMNGLKRASIELDRKVLADMAVMDKPAFAAIVNQVKA 115 Query: 61 NIAA 64 NIAA Sbjct: 116 NIAA 119 >A4G616.1 RL20_HERAR 50S ribosomal protein L20 Length = 119 Score = 112 bits (281), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 54/64 (84%), Positives = 58/64 (90%) Query: 1 VFRALWIARINAAARSHGVTYSVFMNGLKKAAIELDRKVLADMAVTDKAAFAAIVNQVKA 60 VFRALWI RINAA+R HG+TYSVFMNGLK+A+IELDRKVLADMAV DK AFAAIVNQVK Sbjct: 56 VFRALWITRINAASREHGLTYSVFMNGLKRASIELDRKVLADMAVMDKPAFAAIVNQVKT 115 Query: 61 NIAA 64 IAA Sbjct: 116 TIAA 119 >Q1LP77.1 RL20_RALME 50S ribosomal protein L20 Length = 118 Score = 111 bits (278), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 53/63 (84%), Positives = 58/63 (92%) Query: 1 VFRALWIARINAAARSHGVTYSVFMNGLKKAAIELDRKVLADMAVTDKAAFAAIVNQVKA 60 VFRALWIARINAA R HG+TYSVFMNGLKKA+IELDRKVL+DMA+ DK AFAAIVNQVKA Sbjct: 56 VFRALWIARINAATREHGMTYSVFMNGLKKASIELDRKVLSDMAIHDKPAFAAIVNQVKA 115 Query: 61 NIA 63 +A Sbjct: 116 TVA 118 >B3R4J4.1 RL20_CUPTR 50S ribosomal protein L20 Length = 118 Score = 111 bits (278), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 53/63 (84%), Positives = 58/63 (92%) Query: 1 VFRALWIARINAAARSHGVTYSVFMNGLKKAAIELDRKVLADMAVTDKAAFAAIVNQVKA 60 VFRALWIARINAA R HG+TYSVFMNGLKKA+IELDRKVL+DMA+ DK AFAAIVNQVKA Sbjct: 56 VFRALWIARINAATREHGMTYSVFMNGLKKASIELDRKVLSDMAIHDKPAFAAIVNQVKA 115 Query: 61 NIA 63 +A Sbjct: 116 TVA 118 >Q472N5.1 RL20_CUPPJ 50S ribosomal protein L20 Length = 118 Score = 111 bits (278), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 53/63 (84%), Positives = 58/63 (92%) Query: 1 VFRALWIARINAAARSHGVTYSVFMNGLKKAAIELDRKVLADMAVTDKAAFAAIVNQVKA 60 VFRALWIARINAA R HG+TYSVFMNGLKKA+IELDRKVL+DMA+ DK AFAAIVNQVKA Sbjct: 56 VFRALWIARINAATREHGMTYSVFMNGLKKASIELDRKVLSDMAIHDKPAFAAIVNQVKA 115 Query: 61 NIA 63 +A Sbjct: 116 TVA 118 >Q0KBZ0.1 RL20_CUPNH 50S ribosomal protein L20 Length = 118 Score = 111 bits (278), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 53/63 (84%), Positives = 58/63 (92%) Query: 1 VFRALWIARINAAARSHGVTYSVFMNGLKKAAIELDRKVLADMAVTDKAAFAAIVNQVKA 60 VFRALWIARINAA R HG+TYSVFMNGLKKA+IELDRKVL+DMA+ DK AFAAIVNQVKA Sbjct: 56 VFRALWIARINAATREHGMTYSVFMNGLKKASIELDRKVLSDMAIHDKPAFAAIVNQVKA 115 Query: 61 NIA 63 +A Sbjct: 116 TVA 118 >C6BJ05.1 C6BJ05_RALP1 50S ribosomal protein L20 Length = 118 Score = 111 bits (278), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 53/63 (84%), Positives = 58/63 (92%) Query: 1 VFRALWIARINAAARSHGVTYSVFMNGLKKAAIELDRKVLADMAVTDKAAFAAIVNQVKA 60 VFRALWIARINA AR HG+TYS FMNGLKKA+IELDRKVL+DMA+ DK AFAAIVNQVKA Sbjct: 56 VFRALWIARINAGAREHGLTYSKFMNGLKKASIELDRKVLSDMAIHDKVAFAAIVNQVKA 115 Query: 61 NIA 63 N+A Sbjct: 116 NVA 118 >E2T3B3.1 E2T3B3_9RALS 50S ribosomal protein L20 Length = 118 Score = 111 bits (277), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 53/63 (84%), Positives = 58/63 (92%) Query: 1 VFRALWIARINAAARSHGVTYSVFMNGLKKAAIELDRKVLADMAVTDKAAFAAIVNQVKA 60 VFRALWIARINA AR HG+TYS FMNGLKKA+IELDRKVL+DMA+ DK AFAAIVNQVKA Sbjct: 56 VFRALWIARINAGAREHGLTYSKFMNGLKKASIELDRKVLSDMAIHDKVAFAAIVNQVKA 115 Query: 61 NIA 63 N+A Sbjct: 116 NVA 118 >B2UGJ5.1 RL20_RALPJ 50S ribosomal protein L20 Length = 118 Score = 111 bits (277), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 53/63 (84%), Positives = 58/63 (92%) Query: 1 VFRALWIARINAAARSHGVTYSVFMNGLKKAAIELDRKVLADMAVTDKAAFAAIVNQVKA 60 VFRALWIARINA AR HG+TYS FMNGLKKA+IELDRKVL+DMA+ DK AFAAIVNQVKA Sbjct: 56 VFRALWIARINAGAREHGLTYSKFMNGLKKASIELDRKVLSDMAIHDKVAFAAIVNQVKA 115 Query: 61 NIA 63 N+A Sbjct: 116 NVA 118