BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0037.0171.p (65 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value D8ISD6.1 D8ISD6_HERSS 50S ribosomal protein L35 130 5e-29 A6SY32.1 A6SY32_JANMA 50S ribosomal protein L35 119 2e-25 D8NBE0.1 D8NBE0_RALSO 50S ribosomal protein L35 2 117 6e-25 Q8XZ27.1 RL35_RALSO 50S ribosomal protein L35 117 6e-25 D8NIJ5.1 D8NIJ5_RALSO 50S ribosomal protein L35 3 117 7e-25 B5SJS2.1 B5SJS2_RALSO 50S ribosomal protein L35 117 7e-25 B5S2W0.1 B5S2W0_RALSO 50S ribosomal protein L35 117 7e-25 A3RWC0.1 A3RWC0_RALSO 50S ribosomal protein L35 117 7e-25 C6BJ06.1 C6BJ06_RALP1 50S ribosomal protein L35 115 3e-24 E2T3B2.1 E2T3B2_9RALS 50S ribosomal protein L35 115 3e-24 >D8ISD6.1 D8ISD6_HERSS 50S ribosomal protein L35 Length = 65 Score = 130 bits (328), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 65/65 (100%), Positives = 65/65 (100%) Query: 1 MPKMKSKSSAKKRFRVRPGGTVKRGQAFKRHILTKKTTKNKRQLRGTEGVHETNLNSVRA 60 MPKMKSKSSAKKRFRVRPGGTVKRGQAFKRHILTKKTTKNKRQLRGTEGVHETNLNSVRA Sbjct: 1 MPKMKSKSSAKKRFRVRPGGTVKRGQAFKRHILTKKTTKNKRQLRGTEGVHETNLNSVRA 60 Query: 61 MLPFA 65 MLPFA Sbjct: 61 MLPFA 65 >A6SY32.1 A6SY32_JANMA 50S ribosomal protein L35 Length = 76 Score = 119 bits (297), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 58/65 (89%), Positives = 62/65 (95%) Query: 1 MPKMKSKSSAKKRFRVRPGGTVKRGQAFKRHILTKKTTKNKRQLRGTEGVHETNLNSVRA 60 MPKMK+KSSAKKRFRVRPGGTVKRGQAFKRHILTKKTTKNKRQLRG GVH+TN+NSVRA Sbjct: 12 MPKMKTKSSAKKRFRVRPGGTVKRGQAFKRHILTKKTTKNKRQLRGAVGVHDTNMNSVRA 71 Query: 61 MLPFA 65 M+P A Sbjct: 72 MMPNA 76 >D8NBE0.1 D8NBE0_RALSO 50S ribosomal protein L35 2 Length = 65 Score = 117 bits (293), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 56/65 (86%), Positives = 60/65 (92%) Query: 1 MPKMKSKSSAKKRFRVRPGGTVKRGQAFKRHILTKKTTKNKRQLRGTEGVHETNLNSVRA 60 MPKMK+K SA KRF RPGGT+KRGQAFKRHILTKKTTKNKRQLRGTEGVHETNL SVRA Sbjct: 1 MPKMKTKKSASKRFTARPGGTIKRGQAFKRHILTKKTTKNKRQLRGTEGVHETNLKSVRA 60 Query: 61 MLPFA 65 M+P+A Sbjct: 61 MMPYA 65 >Q8XZ27.1 RL35_RALSO 50S ribosomal protein L35 Length = 65 Score = 117 bits (293), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 56/65 (86%), Positives = 60/65 (92%) Query: 1 MPKMKSKSSAKKRFRVRPGGTVKRGQAFKRHILTKKTTKNKRQLRGTEGVHETNLNSVRA 60 MPKMK+K SA KRF RPGGT+KRGQAFKRHILTKKTTKNKRQLRGTEGVHETNL SVRA Sbjct: 1 MPKMKTKKSASKRFTARPGGTIKRGQAFKRHILTKKTTKNKRQLRGTEGVHETNLKSVRA 60 Query: 61 MLPFA 65 M+P+A Sbjct: 61 MMPYA 65 >D8NIJ5.1 D8NIJ5_RALSO 50S ribosomal protein L35 3 Length = 65 Score = 117 bits (292), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 56/65 (86%), Positives = 60/65 (92%) Query: 1 MPKMKSKSSAKKRFRVRPGGTVKRGQAFKRHILTKKTTKNKRQLRGTEGVHETNLNSVRA 60 MPKMK+K SA KRF RPGGT+KRGQAFKRHILTKKTTKNKRQLRGTEGVHETNL SVRA Sbjct: 1 MPKMKTKKSAAKRFTARPGGTIKRGQAFKRHILTKKTTKNKRQLRGTEGVHETNLKSVRA 60 Query: 61 MLPFA 65 M+P+A Sbjct: 61 MMPYA 65 >B5SJS2.1 B5SJS2_RALSO 50S ribosomal protein L35 Length = 65 Score = 117 bits (292), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 56/65 (86%), Positives = 60/65 (92%) Query: 1 MPKMKSKSSAKKRFRVRPGGTVKRGQAFKRHILTKKTTKNKRQLRGTEGVHETNLNSVRA 60 MPKMK+K SA KRF RPGGT+KRGQAFKRHILTKKTTKNKRQLRGTEGVHETNL SVRA Sbjct: 1 MPKMKTKKSAAKRFTARPGGTIKRGQAFKRHILTKKTTKNKRQLRGTEGVHETNLKSVRA 60 Query: 61 MLPFA 65 M+P+A Sbjct: 61 MMPYA 65 >B5S2W0.1 B5S2W0_RALSO 50S ribosomal protein L35 Length = 65 Score = 117 bits (292), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 56/65 (86%), Positives = 60/65 (92%) Query: 1 MPKMKSKSSAKKRFRVRPGGTVKRGQAFKRHILTKKTTKNKRQLRGTEGVHETNLNSVRA 60 MPKMK+K SA KRF RPGGT+KRGQAFKRHILTKKTTKNKRQLRGTEGVHETNL SVRA Sbjct: 1 MPKMKTKKSAAKRFTARPGGTIKRGQAFKRHILTKKTTKNKRQLRGTEGVHETNLKSVRA 60 Query: 61 MLPFA 65 M+P+A Sbjct: 61 MMPYA 65 >A3RWC0.1 A3RWC0_RALSO 50S ribosomal protein L35 Length = 65 Score = 117 bits (292), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 56/65 (86%), Positives = 60/65 (92%) Query: 1 MPKMKSKSSAKKRFRVRPGGTVKRGQAFKRHILTKKTTKNKRQLRGTEGVHETNLNSVRA 60 MPKMK+K SA KRF RPGGT+KRGQAFKRHILTKKTTKNKRQLRGTEGVHETNL SVRA Sbjct: 1 MPKMKTKKSAAKRFTARPGGTIKRGQAFKRHILTKKTTKNKRQLRGTEGVHETNLKSVRA 60 Query: 61 MLPFA 65 M+P+A Sbjct: 61 MMPYA 65 >C6BJ06.1 C6BJ06_RALP1 50S ribosomal protein L35 Length = 65 Score = 115 bits (287), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 55/65 (84%), Positives = 59/65 (90%) Query: 1 MPKMKSKSSAKKRFRVRPGGTVKRGQAFKRHILTKKTTKNKRQLRGTEGVHETNLNSVRA 60 MPKMK+K SA KRF RPGGT+KRGQAFKRHILTKKTTKNKR LRGTEGVHETNL SVRA Sbjct: 1 MPKMKTKKSASKRFTARPGGTIKRGQAFKRHILTKKTTKNKRHLRGTEGVHETNLKSVRA 60 Query: 61 MLPFA 65 M+P+A Sbjct: 61 MMPYA 65 >E2T3B2.1 E2T3B2_9RALS 50S ribosomal protein L35 Length = 65 Score = 115 bits (287), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 55/65 (84%), Positives = 59/65 (90%) Query: 1 MPKMKSKSSAKKRFRVRPGGTVKRGQAFKRHILTKKTTKNKRQLRGTEGVHETNLNSVRA 60 MPKMK+K SA KRF RPGGT+KRGQAFKRHILTKKTTKNKR LRGTEGVHETNL SVRA Sbjct: 1 MPKMKTKKSASKRFTARPGGTIKRGQAFKRHILTKKTTKNKRHLRGTEGVHETNLKSVRA 60 Query: 61 MLPFA 65 M+P+A Sbjct: 61 MMPYA 65