BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0037.0125.p (322 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value D8IS95.1 D8IS95_HERSS Sigma-E factor regulatory (Negative regula... 654 0.0 B9TF96.1 B9TF96_RICCO Sigma-E factor regulatory protein rseB, pu... 650 0.0 A6SXQ7.1 A6SXQ7_JANMA Sigma-E factor negative regulatory protein... 390 e-106 A4G6S4.1 A4G6S4_HERAR Putative negative regulator of sigma E act... 377 e-102 B2SZW4.1 B2SZW4_BURPP Sigma E regulatory protein, MucB/RseB 249 5e-64 B5WGZ8.1 B5WGZ8_9BURK Sigma E regulatory protein, MucB/RseB 246 3e-63 D5ND64.1 D5ND64_9BURK Sigma E regulatory protein, MucB/RseB 245 8e-63 E1T5L2.1 E1T5L2_BURSG Sigma E regulatory protein, MucB/RseB 244 1e-62 Q0BH09.1 Q0BH09_BURCM Sigma E regulatory protein, MucB/RseB 244 2e-62 B2JFJ7.1 B2JFJ7_BURP8 Sigma E regulatory protein, MucB/RseB 243 3e-62 >D8IS95.1 D8IS95_HERSS Sigma-E factor regulatory (Negative regulator) transcription regulator protein Length = 338 Score = 654 bits (1688), Expect = 0.0, Method: Compositional matrix adjust. Identities = 321/322 (99%), Positives = 321/322 (99%) Query: 1 LLLPSAHAAEGEQASASSLLMAQLQKMQSSAQHLNYSGRFVYQQAALIRSSRVTHVVVGK 60 LLLPSAHAAEGEQASASSLLMAQLQKMQSSAQHLNYSGRFVYQQAALIRSSRVTHVVVGK Sbjct: 17 LLLPSAHAAEGEQASASSLLMAQLQKMQSSAQHLNYSGRFVYQQAALIRSSRVTHVVVGK 76 Query: 61 NELEKLELLDGKPAEFIRSNDEVASYLPQSRTIRMEKRVTRDVFPAIVDVRPQDLGAQYH 120 NELEKLELLDGKPAEFIRSNDEVASYLPQSRTIRMEKRVTRDVFPAIVDVRPQDLGAQYH Sbjct: 77 NELEKLELLDGKPAEFIRSNDEVASYLPQSRTIRMEKRVTRDVFPAIVDVRPQDLGAQYH 136 Query: 121 LRAGSDERVAGRDCRVVMLEPRDKLRYGYRFWTDKATGLLLRAQTLDGQGEVIEQIAFTQ 180 LRAGSDERVAGRDCRVVMLEPRDKLRYGYRFWTDKATGLLLRAQTLDGQGEVIEQIAFTQ Sbjct: 137 LRAGSDERVAGRDCRVVMLEPRDKLRYGYRFWTDKATGLLLRAQTLDGQGEVIEQIAFTQ 196 Query: 181 IEIGGIDRARVNPTYKDTHGWHIEKAVMTPIDLPQWQVTPPPGFRKIQQVRRLMAESAAD 240 IEIGGIDRARVNPTYKDTHGWHIEKAVMTPIDLPQWQVTPPPGFRKIQQVRRLMA SAAD Sbjct: 197 IEIGGIDRARVNPTYKDTHGWHIEKAVMTPIDLPQWQVTPPPGFRKIQQVRRLMAGSAAD 256 Query: 241 GAAPAQNRAAEREVSQIVFSDGLAAISVFIEPGSPGREEGSAQQGAMHILGRPQGDYWLT 300 GAAPAQNRAAEREVSQIVFSDGLAAISVFIEPGSPGREEGSAQQGAMHILGRPQGDYWLT Sbjct: 257 GAAPAQNRAAEREVSQIVFSDGLAAISVFIEPGSPGREEGSAQQGAMHILGRPQGDYWLT 316 Query: 301 VVGEVPAAAIRQVADSIELKSK 322 VVGEVPAAAIRQVADSIELKSK Sbjct: 317 VVGEVPAAAIRQVADSIELKSK 338 >B9TF96.1 B9TF96_RICCO Sigma-E factor regulatory protein rseB, putative Length = 338 Score = 650 bits (1677), Expect = 0.0, Method: Compositional matrix adjust. Identities = 319/322 (99%), Positives = 319/322 (99%) Query: 1 LLLPSAHAAEGEQASASSLLMAQLQKMQSSAQHLNYSGRFVYQQAALIRSSRVTHVVVGK 60 LLLPSAHAAEGEQASASSLLMAQLQKMQSSAQHLNYSGRFVYQQAALIRSSRVTHVVVGK Sbjct: 17 LLLPSAHAAEGEQASASSLLMAQLQKMQSSAQHLNYSGRFVYQQAALIRSSRVTHVVVGK 76 Query: 61 NELEKLELLDGKPAEFIRSNDEVASYLPQSRTIRMEKRVTRDVFPAIVDVRPQDLGAQYH 120 NELEKLELLDGKPAEFIRSNDEVASYLPQSRTIRMEKRVTRDVFPAIVDVRPQDLGAQYH Sbjct: 77 NELEKLELLDGKPAEFIRSNDEVASYLPQSRTIRMEKRVTRDVFPAIVDVRPQDLGAQYH 136 Query: 121 LRAGSDERVAGRDCRVVMLEPRDKLRYGYRFWTDKATGLLLRAQTLDGQGEVIEQIAFTQ 180 LRAGSDERVAGRDCRVVMLEPRDKLRYGYRFWTDKATGLLLRAQTLDGQGEVIEQIAFTQ Sbjct: 137 LRAGSDERVAGRDCRVVMLEPRDKLRYGYRFWTDKATGLLLRAQTLDGQGEVIEQIAFTQ 196 Query: 181 IEIGGIDRARVNPTYKDTHGWHIEKAVMTPIDLPQWQVTPPPGFRKIQQVRRLMAESAAD 240 IEIGGIDRARVNPTYKDT GWHIEKAVMTPIDLPQWQVTPPPGFRKIQQVRRLMA SAAD Sbjct: 197 IEIGGIDRARVNPTYKDTQGWHIEKAVMTPIDLPQWQVTPPPGFRKIQQVRRLMAGSAAD 256 Query: 241 GAAPAQNRAAEREVSQIVFSDGLAAISVFIEPGSPGREEGSAQQGAMHILGRPQGDYWLT 300 GAAPAQNRAAEREVSQIVFSDGLAAISVFIEPGSPGREEGSAQQG MHILGRPQGDYWLT Sbjct: 257 GAAPAQNRAAEREVSQIVFSDGLAAISVFIEPGSPGREEGSAQQGVMHILGRPQGDYWLT 316 Query: 301 VVGEVPAAAIRQVADSIELKSK 322 VVGEVPAAAIRQVADSIELKSK Sbjct: 317 VVGEVPAAAIRQVADSIELKSK 338 >A6SXQ7.1 A6SXQ7_JANMA Sigma-E factor negative regulatory protein RseB Length = 340 Score = 390 bits (1002), Expect = e-106, Method: Compositional matrix adjust. Identities = 180/300 (60%), Positives = 240/300 (80%), Gaps = 2/300 (0%) Query: 24 LQKMQSSAQHLNYSGRFVYQQAALIRSSRVTHVVVGKNELEKLELLDGKPAEFIRSNDEV 83 L+K+QSSAQ LNYSG FVYQQ + +R+SR+TH+ GKNELEKLE+LDGKP E+IR+N+E+ Sbjct: 42 LKKIQSSAQKLNYSGTFVYQQGSQVRTSRITHIFNGKNELEKLEILDGKPREYIRNNEEI 101 Query: 84 ASYLPQSRTIRMEKRVTRDVFPAIVDVRPQDLGAQYHLRAGSDERVAGRDCRVVMLEPRD 143 A Y+P++++IR+EKRVT+DVFPAI+ P DL Y+L+ G RVAG DC+ ++LEP+D Sbjct: 102 ACYVPENKSIRVEKRVTKDVFPAILGASPADLAEHYNLKKGETGRVAGYDCQAIILEPKD 161 Query: 144 KLRYGYRFWTDKATGLLLRAQTLDGQGEVIEQIAFTQIEIGGIDRARVNPTYKDTHGWHI 203 KLRYGY+ W +K+TGLLL+AQT++ + +V+EQIAFTQ+ IG ID +RV ++ +T GW + Sbjct: 162 KLRYGYKLWAEKSTGLLLKAQTVNEKNDVVEQIAFTQLSIGHIDPSRVKSSFPNTQGWRV 221 Query: 204 EKAVMTPIDLPQWQVTP-PPGFRKIQQVRRLMAESAADGAAPAQNRAAEREVSQIVFSDG 262 E AVM+ +L W V PPGF+KI++++RL+ ++A AA +REVSQIV+SDG Sbjct: 222 ENAVMSETNLSGWTVKDIPPGFKKIREMKRLITDTAPANAA-ENTPPTQREVSQIVYSDG 280 Query: 263 LAAISVFIEPGSPGREEGSAQQGAMHILGRPQGDYWLTVVGEVPAAAIRQVADSIELKSK 322 LAAISVFIE G+ R EGS QQGAM+I+G+ QGDYWLTVVGEVPAAAI+QV++SIE KSK Sbjct: 281 LAAISVFIESGTQSRTEGSMQQGAMNIVGKRQGDYWLTVVGEVPAAAIKQVSNSIEFKSK 340 >A4G6S4.1 A4G6S4_HERAR Putative negative regulator of sigma E activity Length = 338 Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust. Identities = 180/325 (55%), Positives = 244/325 (75%), Gaps = 10/325 (3%) Query: 1 LLLPSAHAAEGEQASASSLLMAQLQKMQSSAQHLNYSGRFVYQQAALIRSSRVTHVVVGK 60 LL ++HA E + A A L+K+QSSAQ L+YSG FVYQQ +R+SR+TH++ GK Sbjct: 17 LLAFTSHAQSVEPSGAQQDTHAWLKKIQSSAQKLSYSGTFVYQQGNHVRTSRITHILNGK 76 Query: 61 NELEKLELLDGKPAEFIRSNDEVASYLPQSRTIRMEKRVTRDVFPAIVDVRPQDLGAQYH 120 NE+EKLE+LDGKP E+IR+N+E+ Y+P+S++IR+EKRVT DVFPAI+ P DL Y Sbjct: 77 NEVEKLEILDGKPREYIRNNEEITCYVPESKSIRVEKRVTPDVFPAILRASPGDLAEHYK 136 Query: 121 LRAGSDERVAGRDCRVVMLEPRDKLRYGYRFWTDKATGLLLRAQTLDGQGEVIEQIAFTQ 180 L+ G RVAG DC+ ++LEP+DKLRYGY+ W++K+TGLLL+AQT++ + +V+EQIAFTQ Sbjct: 137 LKKGETGRVAGFDCQAIILEPKDKLRYGYKLWSEKSTGLLLKAQTINEKNDVVEQIAFTQ 196 Query: 181 IEIGGIDRARVNPTYKDTHGWHIEKAVMTPIDLPQWQV-TPPPGFRKIQQVRRLMAESAA 239 + IG +D +RV P++K+THGW +E VM+ + W P GF+KI++++RL+ ++ A Sbjct: 197 LVIGHVDPSRVKPSFKNTHGWRVENTVMSETKISGWSAKNMPAGFKKIREMKRLITDTPA 256 Query: 240 D----GAAPAQNRAAEREVSQIVFSDGLAAISVFIEPGSPGREEGSAQQGAMHILGRPQG 295 + AAP Q REVSQIV+SDGLAAISVFIE S R EGS QQGAM+I+G+ G Sbjct: 257 NATAGNAAPTQ-----REVSQIVYSDGLAAISVFIESASQSRTEGSMQQGAMNIVGKRHG 311 Query: 296 DYWLTVVGEVPAAAIRQVADSIELK 320 ++WLTVVGEVPA AI+QVA+SIE K Sbjct: 312 EHWLTVVGEVPAEAIKQVANSIEFK 336 >B2SZW4.1 B2SZW4_BURPP Sigma E regulatory protein, MucB/RseB Length = 347 Score = 249 bits (635), Expect = 5e-64, Method: Compositional matrix adjust. Identities = 130/304 (42%), Positives = 195/304 (64%), Gaps = 14/304 (4%) Query: 24 LQKMQSSAQHLNYSGRFVYQQAALIRSSRVTHVVV-GKNELEKLELLDGKPAEFIRSNDE 82 L ++ +AQ NY G FVYQ+ +++SR+ H E E+LE LDGKP + +R NDE Sbjct: 50 LDRIHQAAQQQNYEGAFVYQRGNFVQTSRIAHYATRSDGEFEQLESLDGKPRKMLRHNDE 109 Query: 83 VASYLPQSRTIRMEKRVTRDVFPAIVDVRPQDLGAQYHLRAGSDERVAGRDCRVVMLEPR 142 + +++P+ +EKR +D FPA++ V + + + Y + D+RVAG D +V+ L+P+ Sbjct: 110 LYTFVPERHLCVVEKRQNKDSFPALLAVSGEQVLSVYEPKLLGDDRVAGVDSQVIELDPK 169 Query: 143 DKLRYGYRFWTDKATGLLLRAQTLDGQGEVIEQIAFTQIEIG-GIDRARVNPTYKDTHGW 201 D R+ Y+ W DK TGLLLRAQTLD G+V+EQ++F+QI IG +D+ + ++T GW Sbjct: 170 DAYRFAYKLWADKKTGLLLRAQTLDTSGQVLEQLSFSQIRIGVPVDKTGIVNGIRNTAGW 229 Query: 202 HIEKAVMTPIDLPQ--WQVTPP-PGFRKIQQVRRLMAESAADGAAPAQNRAAEREVSQIV 258 + + + P+D+ WQ+TP PGFRKI+++RR MA A D P V Q V Sbjct: 230 TVVRPPVEPVDMAAQGWQITPTVPGFRKIRELRRPMA--ARDPGQPTI------PVDQAV 281 Query: 259 FSDGLAAISVFIEP-GSPGREEGSAQQGAMHILGRPQGDYWLTVVGEVPAAAIRQVADSI 317 FSDGLAAISVF+EP + R+EG+ GA H+L + +GD+W+T++GEVP ++Q A +I Sbjct: 282 FSDGLAAISVFVEPVENNTRKEGAGSSGATHVLVKRRGDFWITLLGEVPQTTLQQFASAI 341 Query: 318 ELKS 321 E K+ Sbjct: 342 EYKA 345 >B5WGZ8.1 B5WGZ8_9BURK Sigma E regulatory protein, MucB/RseB Length = 346 Score = 246 bits (628), Expect = 3e-63, Method: Compositional matrix adjust. Identities = 129/304 (42%), Positives = 195/304 (64%), Gaps = 14/304 (4%) Query: 24 LQKMQSSAQHLNYSGRFVYQQAALIRSSRVTHVVVGKN-ELEKLELLDGKPAEFIRSNDE 82 L ++ +AQ LNY G FVYQ+ +++SR+TH + E E+LE LDGKP + +R ND+ Sbjct: 49 LDRIHQAAQQLNYEGAFVYQRGNFVQTSRITHYSTHTDGEFEQLESLDGKPRKMLRHNDD 108 Query: 83 VASYLPQSRTIRMEKRVTRDVFPAIVDVRPQDLGAQYHLRAGSDERVAGRDCRVVMLEPR 142 + +++P+ R + +E R +D FPA++ V + + Y + D+RVAG D V+ L+P+ Sbjct: 109 MYTFVPERRLVVVEIRQNKDSFPALLAVNGSQVLSVYEPKMLGDDRVAGVDSLVMELDPK 168 Query: 143 DKLRYGYRFWTDKATGLLLRAQTLDGQGEVIEQIAFTQIEIG-GIDRARVNPTYKDTHGW 201 D R+ Y+ W DK TGLLLRAQTLD G+V+EQ++F+Q+ IG +D+A + ++ GW Sbjct: 169 DAYRFAYKLWADKKTGLLLRAQTLDPNGQVLEQLSFSQVRIGVPVDKAGIVNGIRNLAGW 228 Query: 202 HIEKAVMTPIDLPQ--WQVTPP-PGFRKIQQVRRLMAESAADGAAPAQNRAAEREVSQIV 258 + + + P+D+ WQ+TP PGF I+++RR MA A G P V Q V Sbjct: 229 TVVRPPVEPVDMAAHGWQITPSVPGFHIIRELRRPMASREA-GQPPI-------PVDQAV 280 Query: 259 FSDGLAAISVFIEP-GSPGREEGSAQQGAMHILGRPQGDYWLTVVGEVPAAAIRQVADSI 317 FSDGLAAISVF+EP + R+EG+ GA H+L + QGD+W+T++GEVP ++Q A +I Sbjct: 281 FSDGLAAISVFVEPVENNTRKEGTGDSGATHVLVKRQGDFWITLLGEVPQTTLQQFASAI 340 Query: 318 ELKS 321 E K+ Sbjct: 341 EYKA 344 >D5ND64.1 D5ND64_9BURK Sigma E regulatory protein, MucB/RseB Length = 347 Score = 245 bits (625), Expect = 8e-63, Method: Compositional matrix adjust. Identities = 129/304 (42%), Positives = 194/304 (63%), Gaps = 14/304 (4%) Query: 24 LQKMQSSAQHLNYSGRFVYQQAALIRSSRVTHVVV-GKNELEKLELLDGKPAEFIRSNDE 82 L ++ +AQ NY G FVYQ+ +++SR+ H E E+LE LDGKP + +R N+E Sbjct: 50 LDRIHQAAQQQNYEGAFVYQRGNFVQTSRIAHYATRSDGEFEQLESLDGKPRKMLRHNEE 109 Query: 83 VASYLPQSRTIRMEKRVTRDVFPAIVDVRPQDLGAQYHLRAGSDERVAGRDCRVVMLEPR 142 + +++P+ +EKR +D FPA++ V + + + Y + D+RVAG D +V+ L+P+ Sbjct: 110 LYTFVPERHLCVVEKRQNKDSFPALLAVSGEQVLSVYEPKLLGDDRVAGVDSQVIELDPK 169 Query: 143 DKLRYGYRFWTDKATGLLLRAQTLDGQGEVIEQIAFTQIEIG-GIDRARVNPTYKDTHGW 201 D R+ Y+ W DK TGLLLRAQTLD G+V+EQ++F+QI IG +D+A + ++ GW Sbjct: 170 DAYRFAYKLWADKKTGLLLRAQTLDPNGQVLEQLSFSQIRIGVPVDKAGIVNGIRNLAGW 229 Query: 202 HIEKAVMTPIDLPQ--WQVTPP-PGFRKIQQVRRLMAESAADGAAPAQNRAAEREVSQIV 258 + + P+D+ WQ+TP PGFRKI+++RR MA A D P V Q V Sbjct: 230 TVVHPPVEPVDMAAQGWQITPTVPGFRKIRELRRPMA--ARDPGQPTI------PVDQAV 281 Query: 259 FSDGLAAISVFIEP-GSPGREEGSAQQGAMHILGRPQGDYWLTVVGEVPAAAIRQVADSI 317 FSDGLAAISVF+EP + R+EG+ GA H+L + +GD+W+T++GEVP ++Q A +I Sbjct: 282 FSDGLAAISVFVEPVENNTRKEGAGSSGATHVLVKRRGDFWITLLGEVPQTTLQQFASAI 341 Query: 318 ELKS 321 E K+ Sbjct: 342 EYKA 345 >E1T5L2.1 E1T5L2_BURSG Sigma E regulatory protein, MucB/RseB Length = 347 Score = 244 bits (623), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 129/304 (42%), Positives = 194/304 (63%), Gaps = 14/304 (4%) Query: 24 LQKMQSSAQHLNYSGRFVYQQAALIRSSRVTHVVV-GKNELEKLELLDGKPAEFIRSNDE 82 L ++ +AQ NY G FVYQ+ +++SR+ H G E E+LE LDGKP + +R NDE Sbjct: 50 LDRIHQAAQQQNYEGAFVYQRGNFVQTSRIAHYATRGDGEFEQLESLDGKPRKMLRHNDE 109 Query: 83 VASYLPQSRTIRMEKRVTRDVFPAIVDVRPQDLGAQYHLRAGSDERVAGRDCRVVMLEPR 142 + +++P+ +EKR +D FPA++ V + + Y + D+RVAG + +V+ L+P+ Sbjct: 110 LYTFVPERHLCVVEKRQNKDSFPALLAVSGEQVLTVYEPKLLGDDRVAGVESQVIELDPK 169 Query: 143 DKLRYGYRFWTDKATGLLLRAQTLDGQGEVIEQIAFTQIEIG-GIDRARVNPTYKDTHGW 201 D R+ Y+ W DK TGLLLRAQTLD G+V+EQ++F+QI IG +D+A + ++T GW Sbjct: 170 DAYRFAYKLWADKKTGLLLRAQTLDPNGQVLEQLSFSQIRIGVPVDKAGIVNGMRNTAGW 229 Query: 202 HIEKAVMTPIDLPQ--WQV-TPPPGFRKIQQVRRLMAESAADGAAPAQNRAAEREVSQIV 258 + + + P+D+ WQ PGFRKI+++RR MA A + P V Q V Sbjct: 230 TVVRPPIEPVDMAAQGWQFGATVPGFRKIRELRRPMA--AREAGQPTI------PVDQAV 281 Query: 259 FSDGLAAISVFIEP-GSPGREEGSAQQGAMHILGRPQGDYWLTVVGEVPAAAIRQVADSI 317 FSDGLAA+SVFIEP + R+EG+ GA H+L + +GD+W+T++GEVP A ++Q A +I Sbjct: 282 FSDGLAAVSVFIEPVENNTRKEGAGSSGATHVLVKRRGDFWITLLGEVPQATLQQFASAI 341 Query: 318 ELKS 321 E K+ Sbjct: 342 EYKA 345 >Q0BH09.1 Q0BH09_BURCM Sigma E regulatory protein, MucB/RseB Length = 350 Score = 244 bits (622), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 129/305 (42%), Positives = 190/305 (62%), Gaps = 16/305 (5%) Query: 24 LQKMQSSAQHLNYSGRFVYQQAALIRSSRVTHVVVGKNELEKLELLDGKPAEFIRSNDEV 83 L ++Q +AQ +Y G FVYQ+ A ++SSR+ HV E E++E LDGKP + +R NDE+ Sbjct: 53 LDRIQQAAQQQSYEGTFVYQRGAYVQSSRIAHVASRDGEFERIETLDGKPRKVLRHNDEL 112 Query: 84 ASYLPQSRTIRMEKRVTRDVFPAIVDVRPQDLGAQYHLRAGSDERVAGRDCRVVMLEPRD 143 +++P+ + +E+R TRD FP+++ + + + Y + +RVAG D +VV L P+D Sbjct: 113 YTFVPERKLCVVERRQTRDSFPSLLGAGGEHVMSVYDAKLLGKDRVAGLDAQVVELVPKD 172 Query: 144 KLRYGYRFWTDKATGLLLRAQTLDGQGEVIEQIAFTQIEIGGI--DRARVNPTYKDTHGW 201 R+ Y+ W D TGLLLR+QTLD V+EQIAF+Q++ GG D+A + ++ GW Sbjct: 173 AYRFTYKLWADARTGLLLRSQTLDASDHVLEQIAFSQVQTGGTSGDKAAIAAGMRNLSGW 232 Query: 202 HIEKAVMTPIDLPQ--WQVTPP-PGFRKIQQVRRLM-AESAADGAAPAQNRAAEREVSQI 257 + + + +D+ WQ+ P GFRKI++VRR M A A D P V Q Sbjct: 233 TVVRPPVATVDMEAQGWQIAPNVAGFRKIREVRRPMAARDAGDPPIP---------VDQA 283 Query: 258 VFSDGLAAISVFIEPGSPG-REEGSAQQGAMHILGRPQGDYWLTVVGEVPAAAIRQVADS 316 VF+DGLA ISVFIEP R+EG+ GA H+L + +GDYW+TV+GEVP A ++Q A + Sbjct: 284 VFTDGLATISVFIEPAEKNTRKEGAGSTGATHVLVKRRGDYWITVLGEVPPATLQQFAAA 343 Query: 317 IELKS 321 IE K+ Sbjct: 344 IEYKA 348 >B2JFJ7.1 B2JFJ7_BURP8 Sigma E regulatory protein, MucB/RseB Length = 346 Score = 243 bits (620), Expect = 3e-62, Method: Compositional matrix adjust. Identities = 128/303 (42%), Positives = 190/303 (62%), Gaps = 14/303 (4%) Query: 24 LQKMQSSAQHLNYSGRFVYQQAALIRSSRVTHVVVGKN-ELEKLELLDGKPAEFIRSNDE 82 L ++ +AQ NY G FVYQ+ ++SSR++H + E E LE LDGKP + +R NDE Sbjct: 49 LNRIHQAAQQQNYEGAFVYQRGNFVQSSRISHYATHNDGEFESLESLDGKPRKLLRHNDE 108 Query: 83 VASYLPQSRTIRMEKRVTRDVFPAIVDVRPQDLGAQYHLRAGSDERVAGRDCRVVMLEPR 142 + +++P+ +EKR +D FPA++ + + Y + +RVAG D V+ L+P+ Sbjct: 109 LYTFVPERHLCVVEKRQNKDSFPALLSASGEQVLTVYEPKMLGTDRVAGVDSEVIELDPK 168 Query: 143 DKLRYGYRFWTDKATGLLLRAQTLDGQGEVIEQIAFTQIEIG-GIDRARVNPTYKDTHGW 201 D R+ Y+ W D TGLLLRAQTLD G+V+EQ++F+QI IG +D+ + K+T GW Sbjct: 169 DANRFAYKLWADTKTGLLLRAQTLDPSGQVLEQMSFSQIRIGVPVDKTPIASGIKNTSGW 228 Query: 202 HIEKAVMTPIDLPQ--WQVTPP-PGFRKIQQVRRLMAESAADGAAPAQNRAAEREVSQIV 258 + + + P+D+ WQ+T P GFRKI+++RR MA A D + P V Q+V Sbjct: 229 TVVRPPVEPVDMEAQGWQLTSPVAGFRKIRELRRPMA--AHDPSNPPI------PVDQMV 280 Query: 259 FSDGLAAISVFIEPGSPG-REEGSAQQGAMHILGRPQGDYWLTVVGEVPAAAIRQVADSI 317 FSDGLAAIS+FIEP R+EG+ GA H+L + +GD+W+T++GEVP ++Q A +I Sbjct: 281 FSDGLAAISIFIEPVEKSTRKEGAGNSGATHVLVKRRGDFWITLLGEVPQTTLQQFAAAI 340 Query: 318 ELK 320 E K Sbjct: 341 EYK 343