BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0037.0107.p (585 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value D8IS77.1 D8IS77_HERSS GGDEF domain containing protein 1160 0.0 Q7NT13.1 Q7NT13_CHRVO Putative uncharacterized protein 342 8e-92 F0QBX3.1 F0QBX3_ACIAP Diguanylate cyclase 317 5e-84 A1TWC4.1 A1TWC4_ACIAC Diguanylate cyclase 316 7e-84 D5NHN3.1 D5NHN3_9BURK Diguanylate cyclase 316 8e-84 Q13RC2.1 Q13RC2_BURXL Periplasmic sensor diguanylate cyclase (GG... 313 7e-83 D8NXR4.1 D8NXR4_RALSO Putative uncharacterized protein 303 7e-80 E2SYD2.1 E2SYD2_9RALS Periplasmic sensor diguanylate cyclase (GG... 298 2e-78 B2U6I9.1 B2U6I9_RALPJ Diguanylate cyclase 296 5e-78 C6BCX0.1 C6BCX0_RALP1 Diguanylate cyclase 293 5e-77 >D8IS77.1 D8IS77_HERSS GGDEF domain containing protein Length = 585 Score = 1160 bits (3002), Expect = 0.0, Method: Compositional matrix adjust. Identities = 579/583 (99%), Positives = 581/583 (99%) Query: 1 MSLNRLFRLISIALLLLFLAFAVSLVWTEWNSYRNGANSVPALRTFRLALVALEKLSAER 60 MSLNRLFRLISIALLLLFLAFAVSLVWTEWNSYRNGANSVPALRTFRLALVALEKLSAER Sbjct: 1 MSLNRLFRLISIALLLLFLAFAVSLVWTEWNSYRNGANSVPALRTFRLALVALEKLSAER 60 Query: 61 GPANAYMGASASQREAVADKLKNARAETDAALAALRQALQSHARLRQSWSLDKVKTVQQA 120 GPANA+MGASASQREAVADKLKNARAETDAALAALRQALQSH RLRQSWSLDKVKTVQQA Sbjct: 61 GPANAFMGASASQREAVADKLKNARAETDAALAALRQALQSHPRLRQSWSLDKVKTVQQA 120 Query: 121 LEPARAAIDRIGRQPEAERNNVYVLSAVGGMVDMIPLMIRVASELSSEVDHADPELREGL 180 LEPARAAIDRIGRQPEAERNNVYVLSAVGGMVDMIPLMIRVASELSSEVDHADPELREGL Sbjct: 121 LEPARAAIDRIGRQPEAERNNVYVLSAVGGMVDMIPLMIRVASELSSEVDHADPELREGL 180 Query: 181 AAIRAAASLREYAGQVGSRFTPALIAHRKLTQDEVIEIGRLYGRIELLRGLLNTQMVSYV 240 AAIRAAASLREYAGQVGSRFTPALIAHRKLTQDEVIEIGRLYGRIELLRGLLNTQM SYV Sbjct: 181 AAIRAAASLREYAGQVGSRFTPALIAHRKLTQDEVIEIGRLYGRIELLRGLLNTQMASYV 240 Query: 241 QRPEFARALELVDKQYFDNGFQFLDFLLQTGVASGDYGLTSVDLFRFYVPQMKSITDLRD 300 QRPEFARALELVDKQYFDNGFQFLDFLLQTGVASGDYGLTSVDLFRFYVPQMKSITDLRD Sbjct: 241 QRPEFARALELVDKQYFDNGFQFLDFLLQTGVASGDYGLTSVDLFRFYVPQMKSITDLRD 300 Query: 301 LLLDDMMEQAERHNRRARNYLLLVIAVTVVACLFFQVLMVLIRRRVVQPLVLATDLVSGL 360 LLLDDMMEQAERHNRRARNYLLLVIAVTVVACLFFQVLMVLIRRRVVQPLVLATDLVSGL Sbjct: 301 LLLDDMMEQAERHNRRARNYLLLVIAVTVVACLFFQVLMVLIRRRVVQPLVLATDLVSGL 360 Query: 361 VEGRLDQEIPQPRYEDEISAMMRALKVLRQRMRERNSLAREREALITQLQTSSNTDFLTG 420 VEGRLDQEIPQPRYEDEISAMMRALKVLRQRMRERNSLAREREALITQLQTSSNTDFLTG Sbjct: 361 VEGRLDQEIPQPRYEDEISAMMRALKVLRQRMRERNSLAREREALITQLQTSSNTDFLTG 420 Query: 421 VLNRRAFFTHGQQQMTVAKRYGRELAVVLFDIDHFKQINDSYGHQAGDAILRGVAQSVSQ 480 VLNRRAFFTHGQQQMTVAKRYGRELAVVLFDIDHFKQINDSYGHQAGDAILRGVAQSVSQ Sbjct: 421 VLNRRAFFTHGQQQMTVAKRYGRELAVVLFDIDHFKQINDSYGHQAGDAILRGVAQSVSQ 480 Query: 481 LLRKVDVLARYGGEEFIILLPESSLLQAAAASEKLRAALAAGEFEIDGGRRIRVTASFGV 540 LLRKVDVLARYGGEEFIILLPESSLLQAAAASEKLRAALAAGEFEIDGGRRIRVTASFGV Sbjct: 481 LLRKVDVLARYGGEEFIILLPESSLLQAAAASEKLRAALAAGEFEIDGGRRIRVTASFGV 540 Query: 541 AAENGGPGLEHLIKQADIALYRAKKLGRNRVKLAGEEEGVEGA 583 AAENGGPGLEHLIKQADIALYRAKKLGRNRV+LAGEEEGVEGA Sbjct: 541 AAENGGPGLEHLIKQADIALYRAKKLGRNRVELAGEEEGVEGA 583 >Q7NT13.1 Q7NT13_CHRVO Putative uncharacterized protein Length = 573 Score = 342 bits (878), Expect = 8e-92, Method: Compositional matrix adjust. Identities = 211/571 (36%), Positives = 318/571 (55%), Gaps = 8/571 (1%) Query: 5 RLFRLISIALLLLFLAFAVSLVWT---EWNSYRNGANSVPALRTFRLALVALEKLSAERG 61 RL ++ ++ L+LF+ + L W EW YR + +++ LA+VA+EK+S ERG Sbjct: 2 RLSKIFTVVTLVLFVLACLPLAWIVNGEWAVYRAADEGLASIQIAHLAMVAVEKISFERG 61 Query: 62 PANAYMGASASQREAVADKLKNARAETDAALAALRQALQSHARLRQSWSLDKVKTVQQAL 121 PAN +G+ A Q ++L+ AR +D AL L AL + +L V++ +Q L Sbjct: 62 PANVLIGSPADQD--ARERLRRARQTSDRALQDLVSALSPSSSAYHRQALAAVRSARQRL 119 Query: 122 EPARAAIDRIGRQPEAERNNVYVLSAVGGMVDMIPLMIRVASELSSEVDHADPELREGLA 181 AR +DR+ P + ++ ++ M D++P ++ + LSS+ P+L L+ Sbjct: 120 SEARLGMDRVIASPRPA--SAGIMPSIRRMFDVVPAILEAVTALSSQASSVYPQLSHPLS 177 Query: 182 AIRAAASLREYAGQVGSRFTPALIAHRKLTQDEVIEIGRLYGRIELLRGLLNTQMVSYVQ 241 R A LREYAG++GS TPAL R L + E +I L GRIE LRG + ++ + Sbjct: 178 GARMATELREYAGRLGSTLTPALAEQRPLAESETRDIHILRGRIEQLRGTILQRLNAPSL 237 Query: 242 RPEFARALELVDKQYFDNGFQFLDFLLQTGVASGDYGLTSVDLFRFYVPQMKSITDLRDL 301 +P +A+ ++ YF G +D +L Y ++ + YVP + SI +LRD Sbjct: 238 QPGPRQAVGDMESLYFREGLAQVDDILLDSHLGRPYRVSLAEFTAGYVPTLYSIVELRDA 297 Query: 302 LLDDMMEQAERHNRRARNYLLLVIAVTVVACLFFQVLMVLIRRRVVQPLVLATDLVSGLV 361 +L E+A A +LL IA+ VVA + L IR + +PL+ A+ L+S L Sbjct: 298 MLTAAAEEARVQRSAAFRHLLGTIALGVVALIAQLALFAYIRWLIARPLLAASRLLSDLA 357 Query: 362 EGRLDQEIPQPRYEDEISAMMRALKVLRQRMRERNSLAREREALITQLQTSSNTDFLTGV 421 +G+LD +IP +DEI ++RA+ +LR+ +E+ +L ER+ LI +L S DFLTG+ Sbjct: 358 DGKLDADIPDSHRKDEIGDVLRAIAILRRNSQEKRALEHERQRLIDELTEMSRIDFLTGI 417 Query: 422 LNRRAFFTHGQQQMTVAKRYGRELAVVLFDIDHFKQINDSYGHQAGDAILRGVAQSVSQL 481 NRRAF ++ A ++LFDIDHFKQ+ND YGH GDA+L VA V ++ Sbjct: 418 TNRRAFTQAAHAEIARAGLARESATLILFDIDHFKQVNDLYGHDCGDAVLVHVAAIVERV 477 Query: 482 LRKVDVLARYGGEEFIILLPESSLLQAAAASEKLRAALAAGEFEIDGGRRIRVTASFGVA 541 R+ D+ RYGGEEF++L A +E+LRAA+A + G+++ VTASFGVA Sbjct: 478 CREGDLAGRYGGEEFVVLACYRGASNGEALAERLRAAIAESPCLLPSGQKLAVTASFGVA 537 Query: 542 A-ENGGPGLEHLIKQADIALYRAKKLGRNRV 571 P LE L++ AD ALY AK+LGRNRV Sbjct: 538 TLGEAAPSLERLLQAADRALYAAKRLGRNRV 568 >F0QBX3.1 F0QBX3_ACIAP Diguanylate cyclase Length = 579 Score = 317 bits (811), Expect = 5e-84, Method: Compositional matrix adjust. Identities = 219/585 (37%), Positives = 313/585 (53%), Gaps = 18/585 (3%) Query: 1 MSLNRLFRLISIALLLLFLAFAVSLVWTEWNSYRNGANSVPALRTFRLALVALEKLSAER 60 MSLN RLI I L + A W +W S+R AL L LVA E++S ER Sbjct: 1 MSLNHFLRLIGIVLATVTALLAAHASWGQWRSWRAADAGSRALADLGLGLVATERVSRER 60 Query: 61 GPANAYMGA--SASQREAVADKLKNARAETDAALAALRQALQSHARLRQSWSL-----DK 113 GP NA +GA A +AVA L AR T A+A LR L + +L +L D Sbjct: 61 GPTNARLGALDGAPDPQAVA-ALARARESTGQAMAQLRAMLAARTQLPHMDALLAGADDT 119 Query: 114 VKTVQQALEPARAAID--RIGRQPEAERNNVYVLSAVGGMVDMIPLMIRVASELSSEVDH 171 + + +A A A I R PEA R +VY L+A+ +P V S L V Sbjct: 120 AQALARARAAADAVISLPHAQRTPEAVRASVYGLAAI------VPRFAPVNSALIQAVRT 173 Query: 172 ADPELREGLAAIRAAASLREYAGQVGSRFTPALIAHRKLTQDEVIEIGRLYGRIELLRGL 231 A P + +R A LRE+AG +GS FT AL R T +E I + GRI L+ L Sbjct: 174 AQPSMDGDTQMLRITAELREHAGLLGSHFTAALAKQRPFTPEERHAIEQTRGRIMALQFL 233 Query: 232 LNTQMVSYVQRPEFARALELVDKQYFDNGFQ-FLDFLLQTGVASGDYGLTSVDLFRFYVP 290 L ++ P+ A+A E VD YF + + + +L G G YG+T+ YVP Sbjct: 234 LEQRLARQDAPPDIAQAWEAVDSGYFGHAARDIVAPVLAAGERDGRYGITAAQFAERYVP 293 Query: 291 QMKSITDLRDLLLDDMMEQAERHNRRARNYLLLVIAVTVVACLFFQVLMVLIRRRVVQPL 350 ++ + LRD L+ + A RA + L+ V + + + ++ RV++PL Sbjct: 294 ELGKVVALRDRLMARLQADALAARERALHSLVEVAGASALLWAILAGTLAMLHARVLRPL 353 Query: 351 VLATDLVSGLVEGRLDQEIPQPRYEDEISAMMRALKVLRQRMRERNSLAREREALITQLQ 410 T + L RLD +P+P +DEI+A++ A++ L++ + R L RER+ LI QL+ Sbjct: 354 AQTTRALQDLARNRLDAPLPRPAADDEIAAVIGAVRALQEHTQARQVLERERDGLIAQLR 413 Query: 411 TSSNTDFLTGVLNRRAFFTHGQQQMTVAKRYGRELAVVLFDIDHFKQINDSYGHQAGDAI 470 S TDFLTG+ NRRAFF ++++ A++ ++A++L D+D FK ND GH AGD Sbjct: 414 EQSLTDFLTGLPNRRAFFAAARERVAQARQQRFDVALMLLDVDLFKSFNDRAGHAAGDEA 473 Query: 471 LRGVAQSVSQLLRKVDVLARYGGEEFIILLPESSLLQAAAASEKLRAALAAGEFEIDGGR 530 LR VA++V LR D++ARYGGEEF++LL + + AA +E+LR A+ + G Sbjct: 474 LRAVARAVRNTLRPGDLVARYGGEEFVVLLGPCAGPEGAACAERLRHAIETAPVILPSGE 533 Query: 531 RIRVTASFGVA-AENGGPGLEHLIKQADIALYRAKKLGRNRVKLA 574 R R+TAS GVA ++ G L+HL+ +AD ALYRAK GRNRV+ A Sbjct: 534 RFRLTASVGVAVSQRHGLVLDHLLSEADTALYRAKDRGRNRVEEA 578 >A1TWC4.1 A1TWC4_ACIAC Diguanylate cyclase Length = 572 Score = 316 bits (810), Expect = 7e-84, Method: Compositional matrix adjust. Identities = 210/583 (36%), Positives = 306/583 (52%), Gaps = 21/583 (3%) Query: 1 MSLNRLFRLISIALLLLFLAFAVSLVWTEWNSYRNGANSVPALRTFRLALVALEKLSAER 60 MSLN+ RLI I L + A W +W S+R AL L +VA E++S ER Sbjct: 1 MSLNQFLRLIGIVLATVTALLAAHASWGQWRSWRAADAGSRALADLGLGMVATERVSRER 60 Query: 61 GPANAYMGASASQREAVADKLKNARAETDAALAALRQALQSHARLRQSWSLDKVKTVQQA 120 GP + A +AVA L AR TD A+A LR L + ++ +L Sbjct: 61 GPLD-----GAPDPQAVA-ALARARESTDQAMAQLRAMLAARTQVPHLDALLAGADDAAQ 114 Query: 121 LEPARA-------AIDRIGRQPEAERNNVYVLSAVGGMVDMIPLMIRVASELSSEVDHAD 173 A+ R PEA R +VY L+A+ +P + + S L V A Sbjct: 115 ALARARAVADGVIALPHAQRTPEAVRASVYGLAAI------VPRLAPINSALIQTVRTAQ 168 Query: 174 PELREGLAAIRAAASLREYAGQVGSRFTPALIAHRKLTQDEVIEIGRLYGRIELLRGLLN 233 P + +R A LRE+AG +GS FT AL+ R T +E I + GRI L+ LL Sbjct: 169 PSMDGDTQVLRITAELREHAGLLGSHFTAALVMQRPFTPEERHAIEQTRGRITALQFLLE 228 Query: 234 TQMVSYVQRPEFARALELVDKQYFDNGFQ-FLDFLLQTGVASGDYGLTSVDLFRFYVPQM 292 ++ P+ A+A E VD YF + + + +L G G YG+T+ YVP++ Sbjct: 229 QRLARQDAPPDIAQAWEAVDSGYFGHAMRDIVAPVLAAGERDGRYGITAAQFAEGYVPEL 288 Query: 293 KSITDLRDLLLDDMMEQAERHNRRARNYLLLVIAVTVVACLFFQVLMVLIRRRVVQPLVL 352 + LRD L+ + A RA + L+ V + + + + RV+QPL Sbjct: 289 GKVVTLRDRLMARLQADALAARERALHSLMEVAGASALLWAILAGTLATLHARVLQPLAQ 348 Query: 353 ATDLVSGLVEGRLDQEIPQPRYEDEISAMMRALKVLRQRMRERNSLAREREALITQLQTS 412 T + L RLD +P+P +DEI+A++ A++ L++ + R L RER+ LI QL+ Sbjct: 349 TTQALQDLARNRLDAPLPRPAADDEIAAVIGAVRALQEHTQARQVLERERDGLIAQLREQ 408 Query: 413 SNTDFLTGVLNRRAFFTHGQQQMTVAKRYGRELAVVLFDIDHFKQINDSYGHQAGDAILR 472 S TDFLTG+ NRRAFF ++++ A++ ++A++L D+D FK ND GH AGD LR Sbjct: 409 SLTDFLTGLPNRRAFFAAARERIAQARQQRFDVALMLLDVDLFKSFNDRAGHAAGDEALR 468 Query: 473 GVAQSVSQLLRKVDVLARYGGEEFIILLPESSLLQAAAASEKLRAALAAGEFEIDGGRRI 532 VA++V LR D++ARYGGEEF++LL + + AA +E+LR A+ + G R Sbjct: 469 AVARAVRHTLRPGDLVARYGGEEFVVLLGPCAGREGAACAERLRHAIETAPVVLPSGERF 528 Query: 533 RVTASFGVA-AENGGPGLEHLIKQADIALYRAKKLGRNRVKLA 574 R+TAS GVA ++ G L+HL+ +AD ALYRAK GRNRV+ A Sbjct: 529 RLTASVGVAVSQRHGMVLDHLLSEADTALYRAKDRGRNRVEEA 571 >D5NHN3.1 D5NHN3_9BURK Diguanylate cyclase Length = 591 Score = 316 bits (809), Expect = 8e-84, Method: Compositional matrix adjust. Identities = 210/579 (36%), Positives = 315/579 (54%), Gaps = 16/579 (2%) Query: 1 MSLNRLFRLISIALLLLFLAFAVSLVWTEWNSYRNGANSVPALRTFRLALVALEKLSAER 60 MS++R F + LL L LV EW++Y ++ A +T+R L+A+E +SAER Sbjct: 9 MSIDRRFSISVAVALLPVLVLCGRLVVHEWHAYMVADGALYAFQTYRAGLLAIESVSAER 68 Query: 61 GPANAYMGASASQREAVADKLKNARAETDAALAALRQALQSHARLRQSWSLDKVKTVQQA 120 GP N+ +G EA L+ AR E+DA + L + LQ+ + L +++ + Sbjct: 69 GPTNSVLGEDLPIPEARRVSLRRARDESDARIEKLLEMLQAGRCPGCAVELARIQEARND 128 Query: 121 LEPARAAIDRIGRQPEAERNNVYVLSAVGGMVDMIPLMIRVASELSSEVDHADPELREGL 180 L AR +D++ P A+R + +AV M+ +IP L++ V D L Sbjct: 129 LASARENVDQLIGLPLAQRRERTLSNAVDRMIKVIPQFAPAIDALAANVVKGDTRALNCL 188 Query: 181 AAIRAAASLREYAGQVGSRFTPALIAHRKLTQDEVIEIGRLYGRIELLRGLLNTQMVSYV 240 A LRE AGQ+GS FT L AHR L +D + I R GRI+ LR L+++ + Sbjct: 189 ILATLTADLREAAGQLGSHFTATLTAHRTLGEDNQLVIERTEGRIDQLRELIDSHVR--- 245 Query: 241 QRPEF-ARALELVDKQYFDNGFQFLDFLLQTGVASGDYGLTSVDLFRFYVPQMKSITDLR 299 RP + A + +++QYF G ++ + G ++ L YVP M+ IT R Sbjct: 246 DRPTLESTAFDKMNRQYFGEGIAYIAEVRSLASRPGGVAISPAQLADRYVPMMRPITAFR 305 Query: 300 DLLLDDMMEQAERHNRRARNYLLLVIAVTVVACLFFQVLM---VLIRRRVVQPLVLATDL 356 D +LD + E H+R N L L+ + A L +L+ +L RRRV++PLV AT + Sbjct: 306 DQVLD-LAETEIGHHRS--NALGLLAVSGLAAFLLIAILLSMAMLFRRRVIRPLVDATHV 362 Query: 357 VSGLVEGRLDQEIPQPRYEDEISAMMRALKVLRQRMRERNSLAREREALITQLQTSSNTD 416 + + G L EIP RY EI AM A+ VL+ ER L RER LI +L+ ++ TD Sbjct: 363 IGAIANGDLTAEIPAARYRGEIKAMFNAIGVLKANSVERQQLERERGRLIHELKATAETD 422 Query: 417 FLTGVLNRRAFFTHGQQQMTVAKRYGRE--LAVVLFDIDHFKQINDSYGHQAGDAILRGV 474 FLT +LNRRAF + +++ A+R E LA+++FDIDHFK+IND+YGH GD L+ V Sbjct: 423 FLTHLLNRRAF--ESRARLSCAERNAAEPELALIMFDIDHFKKINDTYGHATGDHALQLV 480 Query: 475 AQSVSQLLRKVDVLARYGGEEFIILLPESSLLQAAAASEKLRAALAAGEFEIDGGRRIRV 534 A+ ++ R+ DV+AR+GGEEF +L QA A +E+LR ++ GG + Sbjct: 481 ARLCREICRQSDVVARWGGEEFAVLSRVQDAAQALAVAERLRRRISETRIPFSGGEGFTI 540 Query: 535 TASFGVAAENGGPG--LEHLIKQADIALYRAKKLGRNRV 571 TASFGVA + ++ L ++AD LY+AK+ GR+R+ Sbjct: 541 TASFGVAFASACDSRDVDRLFRRADRLLYQAKEAGRDRI 579 >Q13RC2.1 Q13RC2_BURXL Periplasmic sensor diguanylate cyclase (GGDEF domain) Length = 591 Score = 313 bits (801), Expect = 7e-83, Method: Compositional matrix adjust. Identities = 212/581 (36%), Positives = 319/581 (54%), Gaps = 20/581 (3%) Query: 1 MSLNRLFRLISIALLLLFLAFAVSLVWTEWNSYRNGANSVPALRTFRLALVALEKLSAER 60 MS++R F + A LL L LV EW++Y +++ A +T+R L+A+E +SAER Sbjct: 9 MSIDRRFGISVAAALLPVLLLCGRLVVHEWHAYMVADDALYAFQTYRAGLLAIESVSAER 68 Query: 61 GPANAYMGASASQREAVADKLKNARAETDAALAALRQALQSHARLRQSWSLDKVKTVQQA 120 GP N+ +G + EA L AR E+DA + L + LQS + L +++ + Sbjct: 69 GPTNSVLGENLPIPEARRASLLRARGESDARIEKLLEMLQSSRCPGCATELARIENARAE 128 Query: 121 LEPARAAIDRIGRQPEAERNNVYVLSAVGGMVDMIPLMIRVASELSSEVDHADPELREGL 180 L ARA +D++ P A+R + SAV M+ +IP V L++ V D L Sbjct: 129 LTGARANVDQLIGLPLAQRRERALSSAVDRMIKVIPQFSPVIDALAANVVRGDTRALNCL 188 Query: 181 AAIRAAASLREYAGQVGSRFTPALIAHRKLTQDEVIEIGRLYGRIELLRGLLNTQMV--S 238 A LRE AGQ+GS FT AL A R L + + + I R GRI+ LR L+++ + S Sbjct: 189 ILATLTADLREAAGQLGSHFTAALTARRALGEGDQLAIERTEGRIDQLRELIDSHIRDRS 248 Query: 239 YVQRPEFARALELVDKQYFDNGFQFLDFLLQTGVASGDYGLTSVDLFRFYVPQMKSITDL 298 ++ F R +++QYF G ++ + G ++ L YVP M+ IT Sbjct: 249 MLESAPFDR----MNRQYFGEGMAYITDVRSLATRPGGVAISPAQLADHYVPMMRPITAF 304 Query: 299 RDLLLDDMMEQAERHNRRARNYLLLVIAVTVVACLFFQVLM----VLIRRRVVQPLVLAT 354 RD +LD A+ R R+ L ++AV+ +A +++ +L RRRV++PLV AT Sbjct: 305 RDQVLD----LADTEIRFHRSNALGLLAVSALAAFLLIMILLSMAMLFRRRVIRPLVDAT 360 Query: 355 DLVSGLVEGRLDQEIPQPRYEDEISAMMRALKVLRQRMRERNSLAREREALITQLQTSSN 414 ++ + G L EIP RY EI AM A+ VL+ ER L RER LI +L+ ++ Sbjct: 361 HVIGAIANGDLTAEIPAARYRGEIKAMFNAIGVLKANSVERQQLERERGRLIQELKATAE 420 Query: 415 TDFLTGVLNRRAFFTHGQQQMTVAKRYGRE--LAVVLFDIDHFKQINDSYGHQAGDAILR 472 TDFLT +LNRRAF + +++ A+R E LA+++FDIDHFK+IND+YGH GD L+ Sbjct: 421 TDFLTHLLNRRAF--ESRARLSCAERNAAEPELALIMFDIDHFKKINDTYGHATGDHALQ 478 Query: 473 GVAQSVSQLLRKVDVLARYGGEEFIILLPESSLLQAAAASEKLRAALAAGEFEIDGGRRI 532 VA+ + R+ DV+AR+GGEEF +L QA A +E+LR + + GG Sbjct: 479 LVARLCRETCRQADVVARWGGEEFAVLSRVQDAAQALAVAERLRCRIRETRIPVSGGDGF 538 Query: 533 RVTASFGVAAENGGPG--LEHLIKQADIALYRAKKLGRNRV 571 +TASFGVA + ++ L ++AD LY+AK+ GR+R+ Sbjct: 539 NITASFGVAFASACDSRDVDRLFRRADRLLYQAKEAGRDRI 579 >D8NXR4.1 D8NXR4_RALSO Putative uncharacterized protein Length = 592 Score = 303 bits (775), Expect = 7e-80, Method: Compositional matrix adjust. Identities = 206/579 (35%), Positives = 307/579 (53%), Gaps = 16/579 (2%) Query: 1 MSLNRLFRLISIALLLLFLAFAVSLVWTEWNSYRNGANSVPALRTFRLALVALEKLSAER 60 MSL++ F LI+ ++L+ L + L+ EW +Y +++ + R+ R AL A+EK+SAER Sbjct: 1 MSLDKRFGLIAASILIPILLLSCWLLAYEWLAYLRADDALRSFRSLRAALQAMEKVSAER 60 Query: 61 GPANAYMGASASQREAVADKLKNARAETDAALAALRQALQSHARLRQSWSLDKVKTVQQA 120 P N +G A + L AR ++D LA L L+ + LD + +Q Sbjct: 61 RPTNGVLGEDAPVAASHQTALLRARQDSDGHLAQLLDILRPEHCPGCAADLDTARHLQAG 120 Query: 121 LEPARAAIDRIGRQPEAERNNVYVLSAVGGMVDMIPLMIRVASELSSEVDHADPELREGL 180 L ARA +D++ P A+R + V AV M+ +IP + + +S V H D + L Sbjct: 121 LAAARANVDQLIGLPLAQRGDTAVQDAVHRMIAVIPEFHPIVTARTSSVAHGDADALNCL 180 Query: 181 AAIRAAASLREYAGQVGSRFTPALIAHRKLTQDEVIEIGRLYGRIELLRGLLNTQMVSY- 239 R AA LRE AGQ+GSRFT AL R L E + I R GRI+ LR ++++++ ++ Sbjct: 181 ILARLAADLREQAGQLGSRFTGALAMRRGLADHERLAIERTRGRIDQLRAMIDSRLANHA 240 Query: 240 -VQRPEFARALELVDKQYFDNGFQFLDFLLQTGVASGDYGLTSVDLFRFYVPQMKSITDL 298 + FA+ ++ +YFD+G +++D + G +++ + YVP M++IT Sbjct: 241 GLSPAAFAQ----LNAEYFDDGLRYVDAVQALAGRPGGVKISTTEFAEHYVPTMRAITGF 296 Query: 299 RDLLLDDMMEQAERHNRRARNYLLLVIAVTVVACLFFQVLMVLI----RRRVVQPLVLAT 354 RD +L AE R R LLV+A T +A + + I RR VV P AT Sbjct: 297 RDSVLG----LAEGEIRAHRQTTLLVLAGTALAEVLLLAALAWIIASFRRHVVGPFAQAT 352 Query: 355 DLVSGLVEGRLDQEIPQPRYEDEISAMMRALKVLRQRMRERNSLAREREALITQLQTSSN 414 ++ + G L Q IP E AM +AL+VLR ER L ER L+ +L T + Sbjct: 353 RIIDAIAGGDLSQPIPAASAHRETRAMFKALQVLRVNSLERMRLEHERARLMEELATMAE 412 Query: 415 TDFLTGVLNRRAFFTHGQQQMTVAKRYGRELAVVLFDIDHFKQINDSYGHQAGDAILRGV 474 TD LT +LNRRAF T + + +A+++FD+DHFK+IND+YGH AGD LR V Sbjct: 413 TDSLTQLLNRRAFETRARAMCEARGTEAQRIALIMFDVDHFKRINDTYGHAAGDEALRTV 472 Query: 475 AQSVSQLLRKVDVLARYGGEEFIILLPESSLLQAAAASEKLRAALAAGEFEIDGGRRIRV 534 A R+ D++AR GGEEF ++ + A +E++R A+A + Sbjct: 473 ADLCRAHWRQSDIVARIGGEEFAVVALVDTATHARVLAERMRQAIAGARVPAGSAPEHGM 532 Query: 535 TASFGVAAEN--GGPGLEHLIKQADIALYRAKKLGRNRV 571 TASFGVA + P LE L+++AD LY+AK GRNRV Sbjct: 533 TASFGVAVASVADAPELEALLRRADHLLYQAKLAGRNRV 571 >E2SYD2.1 E2SYD2_9RALS Periplasmic sensor diguanylate cyclase (GGDEF domain) Length = 585 Score = 298 bits (762), Expect = 2e-78, Method: Compositional matrix adjust. Identities = 207/569 (36%), Positives = 298/569 (52%), Gaps = 15/569 (2%) Query: 11 SIALLLL-FLAFAVSLVWTEWNSYRNGANSVPALRTFRLALVALEKLSAERGPANAYMGA 69 S+A++L+ L+ + L+ W +Y +S +++ R+ L+A+EK+SAERGP N +G Sbjct: 8 SVAIVLVPVLSLSCWLLGYAWLAYGRADDSARSVQALRMTLLAMEKVSAERGPTNGVLGE 67 Query: 70 SASQREAVADKLKNARAETDAALAALRQALQSHARLRQSWSLDKVKTVQQALEPARAAID 129 + L+ RA +D +A L AL + + Q L ARA ID Sbjct: 68 DLPVPAERSAALQRMRATSDEHVAQLLDALGPEHCPGCEADIQAARRAQTHLAAARANID 127 Query: 130 RIGRQPEAERNNVYVLSAVGGMVDMIPLMIRVASELSSEVDHADPELREGLAAIRAAASL 189 R+ P R++ + V M+ +IP + + + ++ + DP++ L R +A L Sbjct: 128 RLTALPLRSRSSDDLADGVNRMIAVIPEFLPIVNARTANITRGDPDVLNCLTLARLSADL 187 Query: 190 REYAGQVGSRFTPALIAHRKLTQDEVIEIGRLYGRIELLRGLLNTQMVSYVQRPEFARAL 249 REYAGQ+GSRFT AL HR LT DE + I R GRI+ LR ++ T++ + P AL Sbjct: 188 REYAGQLGSRFTGALAMHRMLTFDEQLAIERTQGRIDQLRSMIETRVGG--RAPLNQHAL 245 Query: 250 ELVDKQYFDNGFQFLDFLLQTGVASGDYGLTSVDLFRFYVPQMKSITDLRDLLL----DD 305 + QYF +G +++ + G +T YVP M++ITD RD++L DD Sbjct: 246 ATLGAQYFGDGLRYVAAVRAKASQLGGVDITPAAFAERYVPTMRAITDFRDIVLRLADDD 305 Query: 306 MMEQAERHNRRARNYLLLVIAVTVVACLFFQVLMVL-IRRRVVQPLVLATDLVSGLVEGR 364 + R +RRA +L+ A VV+ L M + RR VV P V AT L+ G+ G Sbjct: 306 I-----REHRRAMLLVLMGSAGAVVSVLGALAWMTISFRRNVVGPFVNATRLIDGIARGN 360 Query: 365 LDQEIPQPRYEDEISAMMRALKVLRQRMRERNSLAREREALITQLQTSSNTDFLTGVLNR 424 L IP EI AM A++VLR ER L ER L+ +L + TD LT +LNR Sbjct: 361 LSVHIPTDFARREIRAMFDAIRVLRINSIERRRLEVERAHLMQELSRMAETDPLTQLLNR 420 Query: 425 RAFFTHGQQQMTVAKRYGRELAVVLFDIDHFKQINDSYGHQAGDAILRGVAQSVSQLLRK 484 RAF + R +A+++FDIDHFK+IND+YGH GD LR VA+ Sbjct: 421 RAFEDRAGAMCKSPQPKARLIALIMFDIDHFKRINDTYGHAVGDEALRTVARLCRAEGPS 480 Query: 485 VDVLARYGGEEFIILLPESSLLQAAAASEKLRAALAAGEFEIDGGRRIRVTASFGVAAEN 544 D++AR GGEEF +++ SL QA A ++ LR +A R+TASFGVAA Sbjct: 481 ADMVARIGGEEFAVMVWADSLAQARAVADHLRHRIAEVTVPTGTDLPCRMTASFGVAAAP 540 Query: 545 G--GPGLEHLIKQADIALYRAKKLGRNRV 571 GP LE L+++AD LY AK GRN V Sbjct: 541 AADGPQLEPLLRRADHLLYAAKLAGRNCV 569 >B2U6I9.1 B2U6I9_RALPJ Diguanylate cyclase Length = 585 Score = 296 bits (759), Expect = 5e-78, Method: Compositional matrix adjust. Identities = 204/569 (35%), Positives = 299/569 (52%), Gaps = 15/569 (2%) Query: 11 SIALLLL-FLAFAVSLVWTEWNSYRNGANSVPALRTFRLALVALEKLSAERGPANAYMGA 69 S+A++L+ L+ + L+ W +Y +S +++ R+ L+A+EK+SAERGP N +G Sbjct: 8 SVAIVLVPVLSLSCWLLGYAWLAYGRADDSARSVQVLRMTLLAMEKVSAERGPTNGVLGE 67 Query: 70 SASQREAVADKLKNARAETDAALAALRQALQSHARLRQSWSLDKVKTVQQALEPARAAID 129 + L+ RA +D +A L AL + + Q L ARA ID Sbjct: 68 DLPVPAERSAALQRMRAVSDEHVAQLLDALGPEHCPGCEADIKAARRAQTHLAAARANID 127 Query: 130 RIGRQPEAERNNVYVLSAVGGMVDMIPLMIRVASELSSEVDHADPELREGLAAIRAAASL 189 R+ P R++ + V M+ +IP + + + ++ + DP++ L R +A L Sbjct: 128 RLTALPLRSRSSDDLADGVNRMIAVIPEFLPIVNARTANITRGDPDVLNCLTLARLSADL 187 Query: 190 REYAGQVGSRFTPALIAHRKLTQDEVIEIGRLYGRIELLRGLLNTQMVSYVQRPEFARAL 249 REYAGQ+GSRFT AL HR LT DE + I R GRI+ LR ++ T++ ++ + A L Sbjct: 188 REYAGQLGSRFTGALAMHRMLTFDEQLAIERTQGRIDQLRSMIETRVGAHSALNQHA--L 245 Query: 250 ELVDKQYFDNGFQFLDFLLQTGVASGDYGLTSVDLFRFYVPQMKSITDLRDLLL----DD 305 + QYF +G +++ + G +T YVP M++ TD RD++L DD Sbjct: 246 ATLGAQYFGDGLRYVAAVRAKASQPGGVDITPAAFAERYVPTMRATTDFRDIVLRLADDD 305 Query: 306 MMEQAERHNRRARNYLLLVIAVTVVACL-FFQVLMVLIRRRVVQPLVLATDLVSGLVEGR 364 + R +RRA +L+ A VV+ L +M+ RR VV+P V AT L+ G+ G Sbjct: 306 I-----RQHRRAMLLVLIGSAGAVVSVLGALAWMMISFRRNVVRPFVNATRLIDGIARGN 360 Query: 365 LDQEIPQPRYEDEISAMMRALKVLRQRMRERNSLAREREALITQLQTSSNTDFLTGVLNR 424 L IP EI AM A++VLR ER L ER L+ +L + TD LT +LNR Sbjct: 361 LSVHIPTDFARREIRAMFDAIRVLRINSIERRRLEVERAHLMQELSRMAETDPLTQLLNR 420 Query: 425 RAFFTHGQQQMTVAKRYGRELAVVLFDIDHFKQINDSYGHQAGDAILRGVAQSVSQLLRK 484 RAF + R +A+++FDIDHFK+IND+YGH GD LR VA+ Sbjct: 421 RAFEDRAGAMCKSPQPKARLIALIMFDIDHFKRINDTYGHAVGDEALRTVARLCRSEGPS 480 Query: 485 VDVLARYGGEEFIILLPESSLLQAAAASEKLRAALAAGEFEIDGGRRIRVTASFGVAAEN 544 D++AR GGEEF +++ SL QA A ++ LR +A +TASFGVAA Sbjct: 481 ADMVARIGGEEFAVMVWADSLAQARAVADHLRHRIAEVTVPTGTDLPCSMTASFGVAAAP 540 Query: 545 G--GPGLEHLIKQADIALYRAKKLGRNRV 571 GP LE L+++AD LY AK GRN V Sbjct: 541 AADGPELEPLLRRADHLLYAAKLAGRNCV 569 >C6BCX0.1 C6BCX0_RALP1 Diguanylate cyclase Length = 585 Score = 293 bits (751), Expect = 5e-77, Method: Compositional matrix adjust. Identities = 202/565 (35%), Positives = 294/565 (52%), Gaps = 7/565 (1%) Query: 11 SIALLLL-FLAFAVSLVWTEWNSYRNGANSVPALRTFRLALVALEKLSAERGPANAYMGA 69 S+A++L+ L+ + L+ W +Y ++ +++ R+AL+A+EK+SAERGP N +G Sbjct: 8 SVAIVLVPVLSLSCWLLGYAWLAYGRADDAARSVQALRMALLAMEKVSAERGPTNGVLGE 67 Query: 70 SASQREAVADKLKNARAETDAALAALRQALQSHARLRQSWSLDKVKTVQQALEPARAAID 129 + L+ RA +D +A L AL ++ + Q L ARA ID Sbjct: 68 DLPVPAERSAALQRMRAVSDEHIAKLLDALGPEHCPGCKADINTARRAQTYLTAARANID 127 Query: 130 RIGRQPEAERNNVYVLSAVGGMVDMIPLMIRVASELSSEVDHADPELREGLAAIRAAASL 189 R+ P R++ + V M+ +IP + + + ++ + DP++ L R AA L Sbjct: 128 RLTALPLHARSSDDLADGVNRMIAVIPEFLPIVNARTANITRGDPDVLNCLTLARLAADL 187 Query: 190 REYAGQVGSRFTPALIAHRKLTQDEVIEIGRLYGRIELLRGLLNTQMVSYVQRPEFARAL 249 REYAGQ+GSRFT AL HR LT +E + I R GRI+ LR ++ T++ + + A A Sbjct: 188 REYAGQLGSRFTGALAMHRALTLEEQLAIERTQGRIDQLRSMIETRVATPSTLNQHAVAT 247 Query: 250 ELVDKQYFDNGFQFLDFLLQTGVASGDYGLTSVDLFRFYVPQMKSITDLRDLLLDDMMEQ 309 + QYF +G +++ G +T YVP M++ITD RD++L + + Sbjct: 248 --LGAQYFGDGLRYVAAARAKASQPGGVDITPAAFAERYVPTMRAITDFRDIVLG-LADD 304 Query: 310 AERHNRRARNYLLLVIAVTVVACLFFQVLMVL-IRRRVVQPLVLATDLVSGLVEGRLDQE 368 R +RR +L+ A V++ L M L RR VV P V AT L+ G+ G L Sbjct: 305 DIRQHRREMLLVLVGSAGAVLSLLGALAWMTLSFRRNVVGPFVNATRLIDGIARGNLSVH 364 Query: 369 IPQPRYEDEISAMMRALKVLRQRMRERNSLAREREALITQLQTSSNTDFLTGVLNRRAFF 428 IP EI AM A++VLR ER L ER L+ +L + TD LT +LNRRAF Sbjct: 365 IPTSFARREIRAMFEAIRVLRINSIERRRLEVERAHLMQELARMAETDPLTQLLNRRAFE 424 Query: 429 THGQQQMTVAKRYGRELAVVLFDIDHFKQINDSYGHQAGDAILRGVAQSVSQLLRKVDVL 488 R +A+++FDIDHFK+IND+YGH GD LR VA D++ Sbjct: 425 DRASAMCNAPHPKARLVALIMFDIDHFKRINDTYGHAVGDEALRTVAGLCRAEGPSADMV 484 Query: 489 ARYGGEEFIILLPESSLLQAAAASEKLRAALAAGEFEIDGGRRIRVTASFGVAAENG--G 546 AR GGEEF +++ SL QA A ++ LR +A R+TASFGVA G Sbjct: 485 ARIGGEEFAVMIWADSLAQARAVADHLRHRIAEVTVPTGTDLPCRMTASFGVAVAPAADG 544 Query: 547 PGLEHLIKQADIALYRAKKLGRNRV 571 P LE L+++AD LY AK GRN V Sbjct: 545 PKLESLLRRADRLLYAAKLAGRNCV 569