BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0037.0078.p (1068 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value D8IRS0.1 D8IRS0_HERSS Ribonuclease E protein EC=3.1.26.12 1618 0.0 A4G6U3.1 A4G6U3_HERAR Ribonuclease E (RNase E) EC=3.1.4.- 1091 0.0 Q39I96.1 Q39I96_BURS3 RNAse E EC=3.1.4.- 994 0.0 Q8Y0K3.1 Q8Y0K3_RALSO Probable ribonuclease e (Rnase e) protein ... 988 0.0 C6BFK7.1 C6BFK7_RALP1 Ribonuclease, Rne/Rng family 983 0.0 B2U958.1 B2U958_RALPJ Ribonuclease, Rne/Rng family 981 0.0 E2SZG1.1 E2SZG1_9RALS Ribonuclease E 980 0.0 D8NCL4.1 D8NCL4_RALSO Ribonuclease E EC=3.1.4.- 975 0.0 C3X9I5.1 C3X9I5_OXAFO Ribonuclease E protein 975 0.0 B1YVK1.1 B1YVK1_BURA4 Ribonuclease, Rne/Rng family 974 0.0 >D8IRS0.1 D8IRS0_HERSS Ribonuclease E protein EC=3.1.26.12 Length = 1062 Score = 1618 bits (4190), Expect = 0.0, Method: Compositional matrix adjust. Identities = 1054/1068 (98%), Positives = 1056/1068 (98%), Gaps = 9/1068 (0%) Query: 1 MLFNATQQEELRVAIVDGQKLIDIDIETTGREQRKSNIYKGVITRIEPSLEACFVNYGEE 60 MLFNATQQEELRVAIVDGQKLIDIDIETTGREQRKSNIYKGVITRIEPSLEACFVNYGEE Sbjct: 4 MLFNATQQEELRVAIVDGQKLIDIDIETTGREQRKSNIYKGVITRIEPSLEACFVNYGEE 63 Query: 61 RHGFLPFKEVARSYFKEGIDVRNASIKEALREGQEIIVQVEKEERGNKGAALTSFISLAG 120 RHGFLPFKEVARSYFKEGIDVRNASIKEALREGQEIIVQVEKEERGNKGAALTSFISLAG Sbjct: 64 RHGFLPFKEVARSYFKEGIDVRNASIKEALREGQEIIVQVEKEERGNKGAALTSFISLAG 123 Query: 121 RYLVLMPNNPRGGGVSRRVEGEDRQELRETMDKLDLPNGMSVIARTAGIGRNVDELQWDL 180 RYLVLMPNNPRGGGVSRRVEGEDRQELRETMDKLDLPNGMSVIARTAGIGRNVDELQWDL Sbjct: 124 RYLVLMPNNPRGGGVSRRVEGEDRQELRETMDKLDLPNGMSVIARTAGIGRNVDELQWDL 183 Query: 181 NYLMQLWRAIEGAGQSASGAFLIYQESSLVIRAIRDYFQPDIGEILIDTDDIHDQAQQFM 240 NYLMQLWRAIEGAGQSASGAFLIYQESSLVIRAIRDYFQPDIGEILIDTDDIHDQAQQFM Sbjct: 184 NYLMQLWRAIEGAGQSASGAFLIYQESSLVIRAIRDYFQPDIGEILIDTDDIHDQAQQFM 243 Query: 241 AHVMPDMVHRVKRYRDDVPLFSRFQIEHQIETAYSRTVPLPSGGAIVIDHTEALVSVDVN 300 AHVMPDMVHRVKRYRDDVPLFSRFQIEHQIETAYSRTVPLPSGGAIVIDHTEALVSVDVN Sbjct: 244 AHVMPDMVHRVKRYRDDVPLFSRFQIEHQIETAYSRTVPLPSGGAIVIDHTEALVSVDVN 303 Query: 301 SARATRGSDIETTAFNTNLEAADEVARQLRLRDLGGLIVIDFIDMENSKNQREVEGRLKD 360 SARATRGSDIETTAFNTNLEAADEVARQLRLRDLGGLIVIDFIDMENSKNQREVEGRLKD Sbjct: 304 SARATRGSDIETTAFNTNLEAADEVARQLRLRDLGGLIVIDFIDMENSKNQREVEGRLKD 363 Query: 361 ALHHDRARVQMGKISRFGLMELSRQRLRPSLSEGSHVTCPRCNGTGHIRDTESSALQVLR 420 ALHHDRARVQMGKISRFGLMELSRQRLRPSLSEGSHVTCPRCNGTGHIRDTESSALQVLR Sbjct: 364 ALHHDRARVQMGKISRFGLMELSRQRLRPSLSEGSHVTCPRCNGTGHIRDTESSALQVLR 423 Query: 421 IIQEEAMKENSAAIHVQAPVDVAAFLLNEKRGEILKIETRHRVTVIMIPNKHLETPHYKM 480 IIQEEAMKENSAAIHVQAPVDVAAFLLNEKRGEILKIETRHRVTVIMIPNKHLETPHYKM Sbjct: 424 IIQEEAMKENSAAIHVQAPVDVAAFLLNEKRGEILKIETRHRVTVIMIPNKHLETPHYKM 483 Query: 481 ERIKHDDPRLDDAQASYTMAEQADTDIGYSKRQKEDVRPRQEAVVKGITPDQPAPIVERK 540 ERIKHDDPRLDDAQASYTMAEQADTDIGYSKRQKEDVRPRQEAVVKGITPDQPAPIVERK Sbjct: 484 ERIKHDDPRLDDAQASYTMAEQADTDIGYSKRQKEDVRPRQEAVVKGITPDQPAPIVERK 543 Query: 541 APEPVAAPVPPPTLAPESGLLGKIFSFFRKKPVAPVAAPAPVEAKAPAKREGERNGRGGD 600 APEPVAAPVPPPTLAPESGLLGKIFSFFRKKPVAPVAAPAPVEAKAPAKREGERNGRGGD Sbjct: 544 APEPVAAPVPPPTLAPESGLLGKIFSFFRKKPVAPVAAPAPVEAKAPAKREGERNGRGGD 603 Query: 601 RNGRNRNRNERGDRAERGERAERNGEQRNGRNPAAAELKAGEAAEGKQVRAPRPPREPKE 660 RNGRNRNRNERGDRAERGERAERNGEQRNGRNPAAAELKAG+AAEGKQVRAPRPPREPKE Sbjct: 604 RNGRNRNRNERGDRAERGERAERNGEQRNGRNPAAAELKAGDAAEGKQVRAPRPPREPKE 663 Query: 661 GREPREPRELQAQARDGQEVKEARRNEPREAREPREAREPREGREPREGREPRAPRAPRG 720 GREPREPRELQAQARDGQEVKE RRNEPREAREPRE REGREPREGREPRAPRAPRG Sbjct: 664 GREPREPRELQAQARDGQEVKETRRNEPREAREPREG---REGREPREGREPRAPRAPRG 720 Query: 721 ERKEAKSEEGLPLEAALAAGTAGVAVAAGTAVIASDEAATQVEAAQVEAGEAGEGAETAE 780 ERKEAKSEEGLPLEAALAAGTAGVAVAAGTAVIASDEAATQVEAAQVEAGEAGEGAETAE Sbjct: 721 ERKEAKSEEGLPLEAALAAGTAGVAVAAGTAVIASDEAATQVEAAQVEAGEAGEGAETAE 780 Query: 781 GATEPRRRRRRGGRNRHRRERDENGNLIDNAEAGDSAEGDAAETADAAETAEGAEAAIPA 840 GATEPRRRRRRGGRNRHRRERDENGNLIDNAEAGDSAEGDAAETA+ AEAAIPA Sbjct: 781 GATEPRRRRRRGGRNRHRRERDENGNLIDNAEAGDSAEGDAAETAEG------AEAAIPA 834 Query: 841 FVPVADAAAASAQAAVAQASFAASPVPAAEDAPVAESAAKVESGVNSVEAVAAAAAEATE 900 FVPVADAAAASAQAAVAQASFAASPVPAAEDAPVAESAAKVESGVNSVEAVAAAAAEATE Sbjct: 835 FVPVADAAAASAQAAVAQASFAASPVPAAEDAPVAESAAKVESGVNSVEAVAAAAAEATE 894 Query: 901 AVFSHQPAIEPVAPSIDASFAPAPVEAAVQAPAQAPAASEAPVEVVPVVAAEPVAAPAPV 960 AVFSHQPAIEPVAPSIDASFAPAPVEAAVQAPAQAPAASEAPVEVVPVVAAEPVAAPAPV Sbjct: 895 AVFSHQPAIEPVAPSIDASFAPAPVEAAVQAPAQAPAASEAPVEVVPVVAAEPVAAPAPV 954 Query: 961 VQQQISLLDAVEAAPVVASAPAAPAAPAAPAPQAAPAPAQAAGNGAQWDSLQQMLSQAGL 1020 VQQQISLLDAVEAAPVVASAPAAPAAPAAPAPQAAPAPAQAAGNGAQWDSLQQMLSQAGL Sbjct: 955 VQQQISLLDAVEAAPVVASAPAAPAAPAAPAPQAAPAPAQAAGNGAQWDSLQQMLSQAGL 1014 Query: 1021 TLATTDPVKLRAAQEAAAAFVPAPRVPRERKPLPPQSTEPLVQVETRR 1068 TLATTDPVKLRAAQEAAAAFVPAPRVPRERKPLPPQSTEPLVQVETRR Sbjct: 1015 TLATTDPVKLRAAQEAAAAFVPAPRVPRERKPLPPQSTEPLVQVETRR 1062 >A4G6U3.1 A4G6U3_HERAR Ribonuclease E (RNase E) EC=3.1.4.- Length = 973 Score = 1091 bits (2821), Expect = 0.0, Method: Compositional matrix adjust. Identities = 527/611 (86%), Positives = 558/611 (91%), Gaps = 14/611 (2%) Query: 1 MLFNATQQEELRVAIVDGQKLIDIDIETTGREQRKSNIYKGVITRIEPSLEACFVNYGEE 60 MLFNATQQEELRVAIVDGQKLIDIDIETTGREQRKSNIYKGVITRIEPSLEACFV+YGE+ Sbjct: 4 MLFNATQQEELRVAIVDGQKLIDIDIETTGREQRKSNIYKGVITRIEPSLEACFVSYGED 63 Query: 61 RHGFLPFKEVARSYFKEGIDVRNASIKEALREGQEIIVQVEKEERGNKGAALTSFISLAG 120 RHGFLPFKEVAR+YFKEG+DVRNASIK+ALREGQEI+VQVEKEERGNKGAALTSF+SLAG Sbjct: 64 RHGFLPFKEVARTYFKEGVDVRNASIKDALREGQEIMVQVEKEERGNKGAALTSFVSLAG 123 Query: 121 RYLVLMPNNPRGGGVSRRVEGEDRQELRETMDKLDLPNGMSVIARTAGIGRNVDELQWDL 180 RYLVLMPNNPRGGGVSRRVEGEDRQELRETMDKLDLP GMSVIARTAGIGRNVDELQWDL Sbjct: 124 RYLVLMPNNPRGGGVSRRVEGEDRQELRETMDKLDLPQGMSVIARTAGIGRNVDELQWDL 183 Query: 181 NYLMQLWRAIEGAGQSASGAFLIYQESSLVIRAIRDYFQPDIGEILIDTDDIHDQAQQFM 240 NYLMQLWRAIEGAGQS +GAFLIYQESSLVIRAIRDYFQPDIGEILIDTDDI++QAQQFM Sbjct: 184 NYLMQLWRAIEGAGQSGAGAFLIYQESSLVIRAIRDYFQPDIGEILIDTDDIYEQAQQFM 243 Query: 241 AHVMPDMVHRVKRYRDDVPLFSRFQIEHQIETAYSRTVPLPSGGAIVIDHTEALVSVDVN 300 +HVMPDMVHRVKRYRDDVPLFSRFQIEHQIETAYSRTVPLPSGGAIVIDHTEALVSVDVN Sbjct: 244 SHVMPDMVHRVKRYRDDVPLFSRFQIEHQIETAYSRTVPLPSGGAIVIDHTEALVSVDVN 303 Query: 301 SARATRGSDIETTAFNTNLEAADEVARQLRLRDLGGLIVIDFIDMENSKNQREVEGRLKD 360 SARATRGSDIETTAF+TN EAA+EVARQLRLRDLGGLIVIDFIDMENSKNQREVE RLKD Sbjct: 304 SARATRGSDIETTAFHTNCEAAEEVARQLRLRDLGGLIVIDFIDMENSKNQREVETRLKD 363 Query: 361 ALHHDRARVQMGKISRFGLMELSRQRLRPSLSEGSHVTCPRCNGTGHIRDTESSALQVLR 420 ALH+DRARVQMGKISRFGLMELSRQRLRPSLSEGSHVTCPRCNGTGHIRDTESSALQVLR Sbjct: 364 ALHYDRARVQMGKISRFGLMELSRQRLRPSLSEGSHVTCPRCNGTGHIRDTESSALQVLR 423 Query: 421 IIQEEAMKENSAAIHVQAPVDVAAFLLNEKRGEILKIETRHRVTVIMIPNKHLETPHYKM 480 IIQEEAMKENSA+IHVQAPVDVAAFLLNEKRGEILKIETRHRV+VI+IPNKHLETPHYK+ Sbjct: 424 IIQEEAMKENSASIHVQAPVDVAAFLLNEKRGEILKIETRHRVSVILIPNKHLETPHYKL 483 Query: 481 ERIKHDDPRLDDAQASYTMAEQADTDIGYSKRQKEDVRPRQEAVVKGITPDQPAPIVERK 540 ERIKHDDPRL++ QASY M EQADTDI Y KR K + +PRQEA+VKGITPD AP+VERK Sbjct: 484 ERIKHDDPRLEEVQASYAMTEQADTDISYDKRLKVEAKPRQEAMVKGITPDH-APVVERK 542 Query: 541 APEPVAAPVPPPTLAPESGLLGKIFSFFRKKPVAPVAAPAPVEAKAPAKREGERNGRG-- 598 E A P E G K+ +FF P P AAP A+A + + +RN RG Sbjct: 543 PVEMATAAAP-----AEKGFFQKLMAFFSGSPEQPKAAP----AQAVQEDKNQRNQRGER 593 Query: 599 --GDRNGRNRN 607 G RN RNR+ Sbjct: 594 KDGGRNQRNRS 604 >Q39I96.1 Q39I96_BURS3 RNAse E EC=3.1.4.- Length = 1053 Score = 994 bits (2570), Expect = 0.0, Method: Compositional matrix adjust. Identities = 527/741 (71%), Positives = 593/741 (80%), Gaps = 35/741 (4%) Query: 1 MLFNATQQEELRVAIVDGQKLIDIDIETTGREQRKSNIYKGVITRIEPSLEACFVNYGEE 60 MLFNATQQEELRVAIVDGQKLIDIDIET GREQRK NIYKGVITRIEPSLEACFVNYGE+ Sbjct: 4 MLFNATQQEELRVAIVDGQKLIDIDIETAGREQRKGNIYKGVITRIEPSLEACFVNYGED 63 Query: 61 RHGFLPFKEVARSYFKEGIDVRNASIKEALREGQEIIVQVEKEERGNKGAALTSFISLAG 120 RHGFLPFKEVAR YFKEGID+R+A I++ALREGQE+IVQVEKEERGNKGAALT+FISLAG Sbjct: 64 RHGFLPFKEVARQYFKEGIDMRSARIQDALREGQELIVQVEKEERGNKGAALTTFISLAG 123 Query: 121 RYLVLMPNNPRGGGVSRRVEGEDRQELRETMDKLDLPNGMSVIARTAGIGRNVDELQWDL 180 RYLVLMPNNPRGGGVSRR+EG++RQELRETM +L +P+GMS+IARTAGIGR+ +ELQWDL Sbjct: 124 RYLVLMPNNPRGGGVSRRIEGDERQELRETMAQLQIPDGMSMIARTAGIGRSAEELQWDL 183 Query: 181 NYLMQLWRAIEGAGQSASGA--FLIYQESSLVIRAIRDYFQPDIGEILIDTDDIHDQAQQ 238 NYL+QLWRAIE A QS + LIY ESSLVIRAIRDYFQPDIGEILIDT++IHDQA+ Sbjct: 184 NYLLQLWRAIEAASQSGNAGQPMLIYLESSLVIRAIRDYFQPDIGEILIDTNEIHDQARA 243 Query: 239 FMAHVMPDMVHRVKRYRDDVPLFSRFQIEHQIETAYSRTVPLPSGGAIVIDHTEALVSVD 298 FM VMPD V +VKRY DDVPLFSRFQIEHQIETAYSRTVPLPSGGAIVIDHTEALV++D Sbjct: 244 FMDIVMPDNVAKVKRYHDDVPLFSRFQIEHQIETAYSRTVPLPSGGAIVIDHTEALVAID 303 Query: 299 VNSARATRGSDIETTAFNTNLEAADEVARQLRLRDLGGLIVIDFIDMENSKNQREVEGRL 358 VNSARAT+G+DIE TA TNLEAADEVARQLRLRDLGGLIVIDFIDME++K+QREVE RL Sbjct: 304 VNSARATKGADIEETATRTNLEAADEVARQLRLRDLGGLIVIDFIDMESAKSQREVEQRL 363 Query: 359 KDALHHDRARVQMGKISRFGLMELSRQRLRPSLSEGSHVTCPRCNGTGHIRDTESSALQV 418 KDAL HDRARVQMGKISRFGLMELSRQRLRP+LSEGSHVTCPRCNGTGHIRDTESSALQV Sbjct: 364 KDALKHDRARVQMGKISRFGLMELSRQRLRPALSEGSHVTCPRCNGTGHIRDTESSALQV 423 Query: 419 LRIIQEEAMKENSAAIHVQAPVDVAAFLLNEKRGEILKIETRHRVTVIMIPNKHLETPHY 478 LRIIQEEAMKEN+AAIH Q PV+V AFLLNEKR EI KIE+R +V +++IPNKHL+TPHY Sbjct: 424 LRIIQEEAMKENTAAIHCQVPVEVTAFLLNEKRQEINKIESRFKVGIVLIPNKHLDTPHY 483 Query: 479 KMERIKHDDPRLDDAQASYTMAEQA----DTDIGYSKRQKEDVRPRQEAVVKGITPDQPA 534 K+ER++HDD RLDD +AS+ MAE+A +++ GYSKR E V+P+QEA VKGITP++PA Sbjct: 484 KLERLRHDDARLDDPRASWKMAEEAARELESETGYSKRAAE-VKPKQEAAVKGITPERPA 542 Query: 535 PIVERKAP-EPVAAPVPPPTLAPES-GLLGKIFSFFRKKPVAPVAAPAPVEAKAPAKREG 592 P + P EPVAAP P +AP S G +G + F P A AP AK A R Sbjct: 543 PSPAPQRPVEPVAAPTP---VAPASGGFIGWLKGLFGVSPAPAPAPVAPAPAKEQAARPA 599 Query: 593 ERNGRGGDRNGRNRNRNERGDRAERGERAERNGEQRNGRNPAAAELKAGEAA--EGKQVR 650 G+R ++ R ERG R R Q GR+ A A + EGK+VR Sbjct: 600 R-----GERTEKSEQRGERGGDRNRNRRGGAQQAQ-GGRDQAVAGRGQPQRQEREGKEVR 653 Query: 651 APRPPREPKEGREPREPRELQAQARDGQEVKEARRNEPREAREPREAREPREGREPREGR 710 PR REP+EGREPRE RE + EPRE RE RE R PREGREPREGR Sbjct: 654 EPREAREPREGREPRESREPR---------------EPRENREGREGRGPREGREPREGR 698 Query: 711 EPRAPRAPRGERKEAKSEEGL 731 EPR PR R R+ + EG+ Sbjct: 699 EPREPRENREPRERIEQPEGV 719 >Q8Y0K3.1 Q8Y0K3_RALSO Probable ribonuclease e (Rnase e) protein EC=3.1.4.- Length = 1014 Score = 988 bits (2554), Expect = 0.0, Method: Compositional matrix adjust. Identities = 609/1095 (55%), Positives = 709/1095 (64%), Gaps = 118/1095 (10%) Query: 1 MLFNATQQEELRVAIVDGQKLIDIDIETTGREQRKSNIYKGVITRIEPSLEACFVNYGEE 60 MLFNATQQEELRVAIVDGQKLIDIDIET GREQRK NIYKGVITRIEPSLEACFVNYGEE Sbjct: 4 MLFNATQQEELRVAIVDGQKLIDIDIETAGREQRKGNIYKGVITRIEPSLEACFVNYGEE 63 Query: 61 RHGFLPFKEVARSYFKEGIDVRNASIKEALREGQEIIVQVEKEERGNKGAALTSFISLAG 120 RHGFLPFKEVAR+YFK G+DVR A I++AL EGQE+IVQVEKEERGNKGAALT+FISLAG Sbjct: 64 RHGFLPFKEVARAYFKNGVDVRTARIQDALAEGQELIVQVEKEERGNKGAALTTFISLAG 123 Query: 121 RYLVLMPNNPRGGGVSRRVEGEDRQELRETMDKLDLPNGMSVIARTAGIGRNVDELQWDL 180 RYLVLMPNNPRGGGVSRR+EGEDRQELRETM +L +P GMS+IARTAGIGR+ +ELQWDL Sbjct: 124 RYLVLMPNNPRGGGVSRRIEGEDRQELRETMAQLQVPEGMSIIARTAGIGRSAEELQWDL 183 Query: 181 NYLMQLWRAIEGAGQSASGAFLIYQESSLVIRAIRDYFQPDIGEILIDTDDIHDQAQQFM 240 NYLMQLW+A++GA LIY ESSLVIRAIRDYFQPDIGEILIDTDDI+DQA+ FM Sbjct: 184 NYLMQLWKAVDGAAVENKAPLLIYLESSLVIRAIRDYFQPDIGEILIDTDDIYDQARAFM 243 Query: 241 AHVMPDMVHRVKRYRDDVPLFSRFQIEHQIETAYSRTVPLPSGGAIVIDHTEALVSVDVN 300 + VMPD ++RVK+YRDDVPLFSRFQIEHQIE+AYSR V LPSGGAIVIDHTEALV+VDVN Sbjct: 244 SVVMPDNMNRVKKYRDDVPLFSRFQIEHQIESAYSRMVMLPSGGAIVIDHTEALVAVDVN 303 Query: 301 SARATRGSDIETTAFNTNLEAADEVARQLRLRDLGGLIVIDFIDMENSKNQREVEGRLKD 360 SARAT+G+DIE TA TNLEAADE+ARQLRLRDLGGLIVIDFIDME+SK Q++VE RLKD Sbjct: 304 SARATKGADIEETALRTNLEAADEIARQLRLRDLGGLIVIDFIDMESSKAQKDVETRLKD 363 Query: 361 ALHHDRARVQMGKISRFGLMELSRQRLRPSLSEGSHVTCPRCNGTGHIRDTESSALQVLR 420 AL HDRARVQMGKISRFGLMELSRQRLRPSLSEGSHVTCPRCNGTGHIRDTESSALQVLR Sbjct: 364 ALRHDRARVQMGKISRFGLMELSRQRLRPSLSEGSHVTCPRCNGTGHIRDTESSALQVLR 423 Query: 421 IIQEEAMKENSAAIHVQAPVDVAAFLLNEKRGEILKIETRHRVTVIMIPNKHLETPHYKM 480 IIQEEAMKEN+AAIH Q PV+VAAFLLNEKR +I IETR +V V++IPNKHLETPHYK+ Sbjct: 424 IIQEEAMKENTAAIHCQVPVEVAAFLLNEKRPDINLIETRFKVNVLLIPNKHLETPHYKL 483 Query: 481 ERIKHDDPRLDDAQASYTMAEQADT----DIGYSKRQKEDVRPRQEAVVKGITPDQPAPI 536 ER++HDDPRLDD +ASY MAE+A D YS R KE +PRQEA VKGITP+QPAP+ Sbjct: 484 ERLRHDDPRLDDNKASYKMAEEAAKELEADTAYSTR-KEAAKPRQEAAVKGITPEQPAPV 542 Query: 537 VERKAPEPV------AAPVPPPTLAPESGLLGKIFSFFRKKPVAPVAAPAPVEAKAPAKR 590 ++ P AAP + + G + + S F KP PV A APVE A+ Sbjct: 543 SVPRSERPARAEATPAAPQAAAPVPAQGGFVSWLKSLFGGKPAEPVVA-APVETPKRAE- 600 Query: 591 EGERNGRGGDRNGRNRNRNERGDRAERGERAERNGEQRNGRNPAAAELKAGEAAEGKQVR 650 +G R RG NR +RG R G+R ER GE++ + + G+ +G Sbjct: 601 DGNRRDRG--------NRQDRGGRT--GQRGER-GERQGQQQAGRDGQRQGQGRDG---- 645 Query: 651 APRPPREPKEGREPREPRELQAQARDGQEVKEARRNEPREAREPREAREPREGREPREGR 710 GR E RE QAQ R+GQ +E +R R+P E E RE Sbjct: 646 ----------GRN--EAREGQAQ-REGQ--REGQRGGRDRNRQPAETAE-------RETV 683 Query: 711 EPRAPRAPRGERKEAKSEEGLPLEAALAAGTAGVAVAAGTAVIASDEAATQVEAAQVEAG 770 E R P+ + +EA+ +G + A Sbjct: 684 EARQPQ----QGQEAREGQGRRERSQERRERA--------------------------PR 713 Query: 771 EAGEGAETAEGATEPRRRRRRGGRNRHRRERD-ENGNLIDNAEAGDSAEGDAAETADAAE 829 E EG E EG EPR R NR RERD + +A A + EG TA A Sbjct: 714 EGREGREPREG-REPRESRD----NREGRERDTQQAKEGASAAAATAVEGLIDPTAAAQV 768 Query: 830 TAEGAEAAIPAFVPVADAAAASAQAAVAQASFAASPVPAAEDAPVAESAAKVESGVNSVE 889 + +PA A+ AA A+ + A+ GV + Sbjct: 769 PQTLLDTTVPAEAITAEVAAPDAEGSGEGEERRRRGRRGRNRYRRDREGAE---GVRTEG 825 Query: 890 AVAAAAAEATEAVFSHQPAIEPVAPSIDASFAPAPVEA-AVQAPAQAPAASEAPVEVVPV 948 + T A +PA+E P+++A+ APV+ V AP Q P + APVE Sbjct: 826 EGESEGEGETAA---GEPAVE-TPPAVEAAQPAAPVQHETVAAPVQ-PVETPAPVETAAP 880 Query: 949 VAAEPVAA-----PAPVV----------QQQISLLDAVEAAPVVASAPAAPAAPAAPAPQ 993 V EPV A PAP + + AA + +A A AP A Sbjct: 881 VVQEPVQAAEAVKPAPTLPAAQPAEPVAAVVAATPPTETAADTIVTALAEVPAPVAST-- 938 Query: 994 AAPAPAQAAGNGAQWDSLQQMLSQAGLTLATTDPVKLRAAQEAAAAFVPAPRVPRERKPL 1053 A APA G +LQ +++ AG+T TD KL+AA+E AA V PRVPRERKPL Sbjct: 939 VAKAPALPIG------TLQAVVADAGMTWVHTDEQKLQAAKEDAARTVTPPRVPRERKPL 992 Query: 1054 PPQSTEPLVQVETRR 1068 PP P+V VET R Sbjct: 993 PPIQQGPMVLVETSR 1007 >C6BFK7.1 C6BFK7_RALP1 Ribonuclease, Rne/Rng family Length = 1008 Score = 983 bits (2540), Expect = 0.0, Method: Compositional matrix adjust. Identities = 513/760 (67%), Positives = 582/760 (76%), Gaps = 54/760 (7%) Query: 1 MLFNATQQEELRVAIVDGQKLIDIDIETTGREQRKSNIYKGVITRIEPSLEACFVNYGEE 60 MLFNATQQEELRVAIVDGQKLIDIDIET GREQRK NIYKGVITRIEPSLEACFVNYGEE Sbjct: 4 MLFNATQQEELRVAIVDGQKLIDIDIETAGREQRKGNIYKGVITRIEPSLEACFVNYGEE 63 Query: 61 RHGFLPFKEVARSYFKEGIDVRNASIKEALREGQEIIVQVEKEERGNKGAALTSFISLAG 120 RHGFLPFKEVAR+YFK+G+DVRNA I++ALREGQE+IVQVEKEERGNKGAALT+FISLAG Sbjct: 64 RHGFLPFKEVARAYFKDGVDVRNARIQDALREGQELIVQVEKEERGNKGAALTTFISLAG 123 Query: 121 RYLVLMPNNPRGGGVSRRVEGEDRQELRETMDKLDLPNGMSVIARTAGIGRNVDELQWDL 180 RYLVLMPNNPRGGGVSRR+EGEDRQELRETM +L++P+GMS+IARTAGIGR+ +ELQWDL Sbjct: 124 RYLVLMPNNPRGGGVSRRIEGEDRQELRETMAQLEVPDGMSIIARTAGIGRSAEELQWDL 183 Query: 181 NYLMQLWRAIEGAGQSASGAFLIYQESSLVIRAIRDYFQPDIGEILIDTDDIHDQAQQFM 240 NYLMQLW+A++GA LIY ESSLVIRAIRDYFQPDIGEILIDTDDI+DQA+ FM Sbjct: 184 NYLMQLWKAVDGAAVDNKAPLLIYLESSLVIRAIRDYFQPDIGEILIDTDDIYDQARAFM 243 Query: 241 AHVMPDMVHRVKRYRDDVPLFSRFQIEHQIETAYSRTVPLPSGGAIVIDHTEALVSVDVN 300 + VMPD ++RVK+YRDDVPLFSRFQIEHQIE+AYSR V LPSGGAIVIDHTEALV++DVN Sbjct: 244 SVVMPDNMNRVKKYRDDVPLFSRFQIEHQIESAYSRMVMLPSGGAIVIDHTEALVAIDVN 303 Query: 301 SARATRGSDIETTAFNTNLEAADEVARQLRLRDLGGLIVIDFIDMENSKNQREVEGRLKD 360 SARAT+G+DIE TA TNLEAADE+ARQLRLRDLGGLIVIDFIDME+SK Q++VE RLKD Sbjct: 304 SARATKGADIEETAARTNLEAADEIARQLRLRDLGGLIVIDFIDMESSKAQKDVETRLKD 363 Query: 361 ALHHDRARVQMGKISRFGLMELSRQRLRPSLSEGSHVTCPRCNGTGHIRDTESSALQVLR 420 AL HDRARVQMGKISRFGLMELSRQRLRPSLSEGSHVTCPRCNGTGHIRDTESSALQVLR Sbjct: 364 ALRHDRARVQMGKISRFGLMELSRQRLRPSLSEGSHVTCPRCNGTGHIRDTESSALQVLR 423 Query: 421 IIQEEAMKENSAAIHVQAPVDVAAFLLNEKRGEILKIETRHRVTVIMIPNKHLETPHYKM 480 IIQEEAMKEN+AAIH Q PV+VAAFLLNEKR +I IETR +V V++IPNKHLETPHYK+ Sbjct: 424 IIQEEAMKENTAAIHCQVPVEVAAFLLNEKRPDINLIETRFKVNVLLIPNKHLETPHYKL 483 Query: 481 ERIKHDDPRLDDAQASYTM----AEQADTDIGYSKRQKEDVRPRQEAVVKGITPDQPAPI 536 ER++HDDPRLD+ +ASY M A++ + D YS R KE +PRQEA VKGITPDQPAP+ Sbjct: 484 ERLRHDDPRLDEDKASYKMAEEAAKELEADTAYSTR-KEAAKPRQEAAVKGITPDQPAPV 542 Query: 537 VERKAPEPVAAPV-------PPPTLAPESGLLGKIFSFFRKKPVAPVAAPAPVEAKAPAK 589 +A P A + P + + G + + + F KP PV APVE Sbjct: 543 SVPRAERPARAEIAPAPQAPTPAPVPAQRGFVSWLKALFGAKPAEPVVT-APVETPKQRA 601 Query: 590 REGERNGRG-----------------------GDRNGRNRNRNERGDR--AERGERAERN 624 EG R GRG G R GR RN G + G+R + Sbjct: 602 EEGNRQGRGNRQDRGGRGQRGERQGQGQNGRDGSRQGRERNEAREGQQQVQREGQRDGQR 661 Query: 625 GEQRNGRNPAAAELKAGEAAEGKQVRAPRPPREPKEGREPREPRELQAQARDGQEVKEAR 684 G + R PA E EAAE +Q P++G+E R + Q Q R + + Sbjct: 662 GNRDRNRQPAQVEGAVREAAEARQ---------PQQGQEVRSEGQNQGQGRRERNQERR- 711 Query: 685 RNEPREAREPREAREPREGREPREGREPRAPRAPRGERKE 724 R+PRE RE REGREPRE RE R PR RGER + Sbjct: 712 ------ERQPREGREAREGREPREPRENREPRENRGERDQ 745 Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 62/160 (38%), Positives = 77/160 (48%), Gaps = 22/160 (13%) Query: 922 PAPVEAAVQAPAQAPAASEAPVEVVPVVAAEPVAAPAPVVQQQ-------------ISLL 968 PA V V + AP + APV PV AAE VA + + Q Q Sbjct: 850 PATVTEPVLTASFAPVENPAPVVHEPVHAAEAVAPVSALPQVQPTEPALATAVAAPAPAP 909 Query: 969 DAVEAAPVVASAPAAPAAPAAPAPQAAPAPAQAAGNGAQWDSLQQMLSQAGLTLATTDPV 1028 A + +A A AP + QA+P P ++LQ +L AG+T TD Sbjct: 910 AAAAPQEAIVTAFAEVPAPVSTIAQASPLPI---------ETLQSVLDNAGMTWVHTDSQ 960 Query: 1029 KLRAAQEAAAAFVPAPRVPRERKPLPPQSTEPLVQVETRR 1068 KLRA+QE AA V APRVPRERKPLPP P++ VET R Sbjct: 961 KLRASQEEAARTVAAPRVPRERKPLPPIQQGPMILVETNR 1000 >B2U958.1 B2U958_RALPJ Ribonuclease, Rne/Rng family Length = 1011 Score = 981 bits (2535), Expect = 0.0, Method: Compositional matrix adjust. Identities = 517/774 (66%), Positives = 586/774 (75%), Gaps = 58/774 (7%) Query: 1 MLFNATQQEELRVAIVDGQKLIDIDIETTGREQRKSNIYKGVITRIEPSLEACFVNYGEE 60 MLFNATQQEELRVAIVDGQKLIDIDIET GREQRK NIYKGVITRIEPSLEACFVNYGEE Sbjct: 4 MLFNATQQEELRVAIVDGQKLIDIDIETAGREQRKGNIYKGVITRIEPSLEACFVNYGEE 63 Query: 61 RHGFLPFKEVARSYFKEGIDVRNASIKEALREGQEIIVQVEKEERGNKGAALTSFISLAG 120 RHGFLPFKEVAR+YFK+G+DVR A I++AL EGQE+IVQVEKEERGNKGAALT+FISLAG Sbjct: 64 RHGFLPFKEVARAYFKDGVDVRGARIQDALSEGQELIVQVEKEERGNKGAALTTFISLAG 123 Query: 121 RYLVLMPNNPRGGGVSRRVEGEDRQELRETMDKLDLPNGMSVIARTAGIGRNVDELQWDL 180 RYLVLMPNNPRGGGVSRR+EGEDRQELRETM +L++P+GMS+IARTAGIGR+ +ELQWDL Sbjct: 124 RYLVLMPNNPRGGGVSRRIEGEDRQELRETMAQLEVPDGMSIIARTAGIGRSAEELQWDL 183 Query: 181 NYLMQLWRAIEGAGQSASGAFLIYQESSLVIRAIRDYFQPDIGEILIDTDDIHDQAQQFM 240 NYLMQLW+A++GA LIY ESSLVIRAIRDYFQPDIGEILIDTDDI+DQA+ FM Sbjct: 184 NYLMQLWKAVDGAAVDNKAPLLIYLESSLVIRAIRDYFQPDIGEILIDTDDIYDQARAFM 243 Query: 241 AHVMPDMVHRVKRYRDDVPLFSRFQIEHQIETAYSRTVPLPSGGAIVIDHTEALVSVDVN 300 + VMPD ++RVK+YRDDVPLFSRFQIEHQIE+AYSR V LPSGGAIVIDHTEALV++DVN Sbjct: 244 SVVMPDNMNRVKKYRDDVPLFSRFQIEHQIESAYSRMVMLPSGGAIVIDHTEALVAIDVN 303 Query: 301 SARATRGSDIETTAFNTNLEAADEVARQLRLRDLGGLIVIDFIDMENSKNQREVEGRLKD 360 SARAT+G+DIE TA TNLEAADE+ARQLRLRDLGGLIVIDFIDME+SK Q++VE RLKD Sbjct: 304 SARATKGADIEETAARTNLEAADEIARQLRLRDLGGLIVIDFIDMESSKAQKDVETRLKD 363 Query: 361 ALHHDRARVQMGKISRFGLMELSRQRLRPSLSEGSHVTCPRCNGTGHIRDTESSALQVLR 420 AL HDRARVQMGKISRFGLMELSRQRLRPSLSEGSHVTCPRCNGTGHIRDTESSALQVLR Sbjct: 364 ALRHDRARVQMGKISRFGLMELSRQRLRPSLSEGSHVTCPRCNGTGHIRDTESSALQVLR 423 Query: 421 IIQEEAMKENSAAIHVQAPVDVAAFLLNEKRGEILKIETRHRVTVIMIPNKHLETPHYKM 480 IIQEEAMKEN+AAIH Q PV+VAAFLLNEKR +I IETR +V V++IPNKHLETPHYK+ Sbjct: 424 IIQEEAMKENTAAIHCQVPVEVAAFLLNEKRPDINLIETRFKVNVLLIPNKHLETPHYKL 483 Query: 481 ERIKHDDPRLDDAQASYTM----AEQADTDIGYSKRQKEDVRPRQEAVVKGITPDQPAPI 536 ER++HDDPRLDD +ASY M A++ + D YS R KE +PRQEA VKGITPDQPAP+ Sbjct: 484 ERLRHDDPRLDDDKASYKMAEEAAKELEADTAYSTR-KETAKPRQEAAVKGITPDQPAPV 542 Query: 537 VERKAPEPV-------AAPVPPPTLAPESGLLGKIFSFFRKKPVAPVAAPAPVEAKAPAK 589 +A PV P + + G + + S F KP PV A APVE Sbjct: 543 SVPRAERPVRTEAAPAPQAPAPAPVPAQGGFVSWLKSLFGAKPAEPVVA-APVETPKQRA 601 Query: 590 REGERNGRG--------------------------GDRNGRNRNRNERGDR--AERGERA 621 EG R GRG G R GR RN G + G+R Sbjct: 602 EEGNRQGRGNRQDRGGRGQRGERGERQGQGQNGRDGSRQGRERNEAREGQQQVQREGQRD 661 Query: 622 ERNGEQRNGRNPAAAELKAGEAAEGKQVRAPRPPREPKEGREPREPRELQAQARDGQEVK 681 + G + R PA E E AE +Q P++G+E R + Q Q R + + Sbjct: 662 GQRGNRDRNRQPAQVEGAVRETAEARQ---------PQQGQEVRTEGQNQGQGRRERNQE 712 Query: 682 EARRNEPREAREPREAREPREGREPREGREPRAPRAPRGERKEAKSEEGLPLEA 735 R+PRE RE REGREPRE RE R PR RGER +A+++E L A Sbjct: 713 RR-------ERQPREGREAREGREPREPRENREPRENRGER-DAQAKEAASLAA 758 Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 63/160 (39%), Positives = 81/160 (50%), Gaps = 22/160 (13%) Query: 922 PAPVEAAVQAPAQAPAASEAPVEVVPVVAAEPVAAPAPVVQQQ-------------ISLL 968 PA V VQ + AP + APV PV AAE VA + + Q Q + + Sbjct: 853 PATVAEPVQTTSFAPVENPAPVVQEPVHAAEAVAPVSALPQVQPTEPALAAAIAAPAAEV 912 Query: 969 DAVEAAPVVASAPAAPAAPAAPAPQAAPAPAQAAGNGAQWDSLQQMLSQAGLTLATTDPV 1028 +A + +A A AP + +A+P P + +LQ +L AG+T TD Sbjct: 913 EAEAPQEAIVTAFAEVPAPVSTIAKASPLPIE---------TLQSVLDNAGMTWVHTDSQ 963 Query: 1029 KLRAAQEAAAAFVPAPRVPRERKPLPPQSTEPLVQVETRR 1068 KLRA+QE AA V APRVPRERKPLPP P+V VET R Sbjct: 964 KLRASQEEAARTVTAPRVPRERKPLPPVQHGPMVLVETHR 1003 >E2SZG1.1 E2SZG1_9RALS Ribonuclease E Length = 1006 Score = 980 bits (2534), Expect = 0.0, Method: Compositional matrix adjust. Identities = 512/760 (67%), Positives = 581/760 (76%), Gaps = 54/760 (7%) Query: 1 MLFNATQQEELRVAIVDGQKLIDIDIETTGREQRKSNIYKGVITRIEPSLEACFVNYGEE 60 MLFNATQQEELRVAIVDGQKLIDIDIET GREQRK NIYKGVITRIEPSLEACFVNYGEE Sbjct: 4 MLFNATQQEELRVAIVDGQKLIDIDIETAGREQRKGNIYKGVITRIEPSLEACFVNYGEE 63 Query: 61 RHGFLPFKEVARSYFKEGIDVRNASIKEALREGQEIIVQVEKEERGNKGAALTSFISLAG 120 RHGFLPFKEVAR+YFK+G+DVRNA I++ALREGQE+IVQVEKEERGNKGAALT+FISLAG Sbjct: 64 RHGFLPFKEVARAYFKDGVDVRNARIQDALREGQELIVQVEKEERGNKGAALTTFISLAG 123 Query: 121 RYLVLMPNNPRGGGVSRRVEGEDRQELRETMDKLDLPNGMSVIARTAGIGRNVDELQWDL 180 RYLVLMPNNPRGGGVSRR+EGEDRQELRETM +L++P+GMS+IARTAGIGR+ +ELQWDL Sbjct: 124 RYLVLMPNNPRGGGVSRRIEGEDRQELRETMAQLEVPDGMSIIARTAGIGRSAEELQWDL 183 Query: 181 NYLMQLWRAIEGAGQSASGAFLIYQESSLVIRAIRDYFQPDIGEILIDTDDIHDQAQQFM 240 NYLMQLW+A++GA LIY ESSLVIRAIRDYFQPDIGEILIDTDDI+DQA+ FM Sbjct: 184 NYLMQLWKAVDGAAVDNKAPLLIYLESSLVIRAIRDYFQPDIGEILIDTDDIYDQARAFM 243 Query: 241 AHVMPDMVHRVKRYRDDVPLFSRFQIEHQIETAYSRTVPLPSGGAIVIDHTEALVSVDVN 300 + VMPD ++RVK+YRDDVPLFSRFQIEHQIE+AYSR V LPSGGAIVIDHTEALV++DVN Sbjct: 244 SVVMPDNMNRVKKYRDDVPLFSRFQIEHQIESAYSRMVMLPSGGAIVIDHTEALVAIDVN 303 Query: 301 SARATRGSDIETTAFNTNLEAADEVARQLRLRDLGGLIVIDFIDMENSKNQREVEGRLKD 360 SARAT+G+DIE TA TNLEAADE+ARQLRLRDLGGLIVIDFIDME+SK Q++VE RLKD Sbjct: 304 SARATKGADIEETAARTNLEAADEIARQLRLRDLGGLIVIDFIDMESSKAQKDVETRLKD 363 Query: 361 ALHHDRARVQMGKISRFGLMELSRQRLRPSLSEGSHVTCPRCNGTGHIRDTESSALQVLR 420 AL HDRARVQMGKISRFGLMELSRQRLRPSLSEGSHVTCPRCNGTGHIRDTESSALQVLR Sbjct: 364 ALRHDRARVQMGKISRFGLMELSRQRLRPSLSEGSHVTCPRCNGTGHIRDTESSALQVLR 423 Query: 421 IIQEEAMKENSAAIHVQAPVDVAAFLLNEKRGEILKIETRHRVTVIMIPNKHLETPHYKM 480 IIQEEAMKEN+AAIH Q PV+VAAFLLNEKR +I IETR +V V++IPNKHLETPHYK+ Sbjct: 424 IIQEEAMKENTAAIHCQVPVEVAAFLLNEKRPDINLIETRFKVNVLLIPNKHLETPHYKL 483 Query: 481 ERIKHDDPRLDDAQASYTM----AEQADTDIGYSKRQKEDVRPRQEAVVKGITPDQPAPI 536 ER++HDDPRLD+ +ASY M A++ + D YS R KE +PRQEA VKGITPDQPAP+ Sbjct: 484 ERLRHDDPRLDEDKASYKMAEEAAKELEADTAYSTR-KEAAKPRQEAAVKGITPDQPAPV 542 Query: 537 VERKAPEPVAAPV-------PPPTLAPESGLLGKIFSFFRKKPVAPVAAPAPVEAKAPAK 589 +A P A + P + + G + + + F KP PV APVE Sbjct: 543 SVPRAERPARAEIAPAPQAPTPAPVPAQRGFVSWLKALFGAKPAEPVVT-APVETPKQRA 601 Query: 590 REGERNGRG-----------------------GDRNGRNRNRNERGDR--AERGERAERN 624 EG R GRG G R GR RN G + G+R + Sbjct: 602 EEGNRQGRGNRQDRGGRGQRGERQGQGQNGRDGSRQGRERNEAREGQQQVQREGQRDGQR 661 Query: 625 GEQRNGRNPAAAELKAGEAAEGKQVRAPRPPREPKEGREPREPRELQAQARDGQEVKEAR 684 G + R PA E E AE +Q P++G+E R + Q Q R + + Sbjct: 662 GNRDRNRQPAQVEGAVRETAEARQ---------PQQGQEVRSEGQNQGQGRRERNQERR- 711 Query: 685 RNEPREAREPREAREPREGREPREGREPRAPRAPRGERKE 724 R+PRE RE REGREPRE RE R PR RGER + Sbjct: 712 ------ERQPREGREAREGREPREPRENREPRENRGERDQ 745 Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 63/159 (39%), Positives = 79/159 (49%), Gaps = 20/159 (12%) Query: 914 PSIDASFAP----APVEAAVQAPAQAPAASEAPVEVVPVVAAEPVAAPAPVVQQQISLLD 969 P + ASFAP APV V P A A + APV +P V +P + Sbjct: 856 PVLTASFAPVENPAPV---VHEPVHA-AEAVAPVSALPQV--QPTEPALATAVAAPAPAA 909 Query: 970 AVEAAPVVASAPAAPAAPAAPAPQAAPAPAQAAGNGAQWDSLQQMLSQAGLTLATTDPVK 1029 A +V + PA P + QA+P P + +LQ +L AG+T TD K Sbjct: 910 AAPQEAIVTAFAEVPA-PVSTIAQASPLPIE---------TLQSVLDNAGMTWVHTDSQK 959 Query: 1030 LRAAQEAAAAFVPAPRVPRERKPLPPQSTEPLVQVETRR 1068 LRA+QE AA V APRVPRERKPLPP P++ VET R Sbjct: 960 LRASQEEAARTVAAPRVPRERKPLPPIQQGPMILVETNR 998 >D8NCL4.1 D8NCL4_RALSO Ribonuclease E EC=3.1.4.- Length = 1029 Score = 975 bits (2521), Expect = 0.0, Method: Compositional matrix adjust. Identities = 603/1101 (54%), Positives = 701/1101 (63%), Gaps = 115/1101 (10%) Query: 1 MLFNATQQEELRVAIVDGQKLIDIDIETTGREQRKSNIYKGVITRIEPSLEACFVNYGEE 60 MLFNATQQEELRVAIVDGQKLIDIDIET GREQRK NIYKGVITRIEPSLEACFVNYGEE Sbjct: 4 MLFNATQQEELRVAIVDGQKLIDIDIETAGREQRKGNIYKGVITRIEPSLEACFVNYGEE 63 Query: 61 RHGFLPFKEVARSYFKEGIDVRNASIKEALREGQEIIVQVEKEERGNKGAALTSFISLAG 120 RHGFLPFKEVAR+YFK G+DVR A I++AL EGQE+IVQVEKEERGNKGAALT+FISLAG Sbjct: 64 RHGFLPFKEVARAYFKNGVDVRTARIQDALAEGQELIVQVEKEERGNKGAALTTFISLAG 123 Query: 121 RYLVLMPNNPRGGGVSRRVEGEDRQELRETMDKLDLPNGMSVIARTAGIGRNVDELQWDL 180 RYLVLMPNNPRGGGVSRR+EGEDRQELRETM +L +P GMS+IARTAGIGR+ +ELQWDL Sbjct: 124 RYLVLMPNNPRGGGVSRRIEGEDRQELRETMAQLQVPEGMSIIARTAGIGRSAEELQWDL 183 Query: 181 NYLMQLWRAIEGAGQSASGAFLIYQESSLVIRAIRDYFQPDIGEILIDTDDIHDQAQQFM 240 NYLMQLW+A++GA LIY ESSLVIRAIRDYFQPDIGEILIDTDDI+DQA+ FM Sbjct: 184 NYLMQLWKAVDGAAVENRAPLLIYLESSLVIRAIRDYFQPDIGEILIDTDDIYDQARAFM 243 Query: 241 AHVMPDMVHRVKRYRDDVPLFSRFQIEHQIETAYSRTVPLPSGGAIVIDHTEALVSVDVN 300 + VMPD ++RVK+YRDDVPLFSRFQIEHQIE+AYSR V LPSGGAIVIDHTEALV+VDVN Sbjct: 244 SVVMPDNMNRVKKYRDDVPLFSRFQIEHQIESAYSRMVMLPSGGAIVIDHTEALVAVDVN 303 Query: 301 SARATRGSDIETTAFNTNLEAADEVARQLRLRDLGGLIVIDFIDMENSKNQREVEGRLKD 360 SARAT+G+DIE TA TNLEAADE+ARQLRLRDLGGLIVIDFIDME+SK Q++VE RLKD Sbjct: 304 SARATKGADIEETALRTNLEAADEIARQLRLRDLGGLIVIDFIDMESSKAQKDVETRLKD 363 Query: 361 ALHHDRARVQMGKISRFGLMELSRQRLRPSLSEGSHVTCPRCNGTGHIRDTESSALQVLR 420 AL HDRARVQMGKISRFGLMELSRQRLRPSLSEGSHVTCPRCNGTGHIRDTESSALQVLR Sbjct: 364 ALRHDRARVQMGKISRFGLMELSRQRLRPSLSEGSHVTCPRCNGTGHIRDTESSALQVLR 423 Query: 421 IIQEEAMKENSAAIHVQAPVDVAAFLLNEKRGEILKIETRHRVTVIMIPNKHLETPHYKM 480 IIQEEAMKEN+AA+H Q PV+VAAFLLNEKR +I IETR +V V++IPNKHLETPHYK+ Sbjct: 424 IIQEEAMKENTAALHCQVPVEVAAFLLNEKRPDINLIETRFKVNVLLIPNKHLETPHYKL 483 Query: 481 ERIKHDDPRLDDAQASYTMAEQADT----DIGYSKRQKEDVRPRQEAVVKGITPDQPAPI 536 ER++HDDPRLDD +ASY MAE+A D YS R KE V+PRQEA VKGITP+QPAP+ Sbjct: 484 ERLRHDDPRLDDNKASYKMAEEAAKELEADTAYSTR-KETVKPRQEAAVKGITPEQPAPV 542 Query: 537 VERKAPEPVAA------PVPPPTLAPESGLLGKIFSFFRKKPVAPVAAPAPVEAKAPAKR 590 +A P A P + + G + + S F KP PV PVE Sbjct: 543 SVPRAERPARAEATPAAQQAPAPVPAQGGFVSWLKSLFGGKPAEPVVT-VPVETP----- 596 Query: 591 EGERNGRGGDRNGRNRNRNERGDRAERGERAERNGEQRNGRNPAAAELKAGEAAEGKQVR 650 R E G+R +RG R +R G + G+ G Sbjct: 597 ----------------KRAEDGNRRDRGNRQDRGGRTGQRGERGERGERQGQQQAG---- 636 Query: 651 APRPPREPKEGREP--REPRELQAQARDGQEVKEARRNEPREAREPREAREPREGREPRE 708 R + +GR+ E RE QAQ R+GQ +E +R R+P E E RE E Sbjct: 637 --RDGQRQGQGRDGGRNEAREGQAQ-REGQ--REGQRGGRDRNRQPAETAE----RETVE 687 Query: 709 GREPRAPRAPRGERKEAKSEEGLPLEAALAAGTAGVAVAAGTAVIASDEAATQVEAAQVE 768 R+P+ + +EA+ +G + A G E Sbjct: 688 ARQPQ-------QGQEAREGQGRRERSQERRERAPREGREGR-----------------E 723 Query: 769 AGEAGEGAETAEGATEPRRRRRRGGRNRHRRERDENGNLIDNAEAGDSA--EGDAAETAD 826 E EG E EG EPR R NR RERD + A A +A EG TA Sbjct: 724 NREGREGREPREG-REPRESRD----NREGRERDTQ-QAKEGASAATTAAVEGLIDPTAA 777 Query: 827 AAETAEGAEAAIPAFVPVADAAAASAQAAVAQASFAASPVPAAEDAPVAESAAKVESGVN 886 A + +PA A+ AA + + A+ GV Sbjct: 778 AQVPQTLLDTTVPAEAITAEGAAPDVEGSGEGEERRRRGRRGRNRYRRDREGAE---GVR 834 Query: 887 SVEAVAAAAAEATEAVFSHQPAIEPVAPSIDASFAPAPVEA-AVQAPAQ-----APAASE 940 + + + T A +PA+E P+++A+ APV+ V AP Q AP + Sbjct: 835 TEGESESEGEDETAA---GEPAVE-TPPAVEAAQPAAPVQHETVVAPVQPVEAPAPVETA 890 Query: 941 APVEVV--PVVAAEPVAAPAPVVQ-----------QQISLLDAVEAAPVVASAPAAPAAP 987 APV V PV AAE V PAP Q + A + +A A AP Sbjct: 891 APVVHVQEPVQAAEAVT-PAPTTQPAAQPAEPVAAVVAATPPVETVADTIVTAVAEVPAP 949 Query: 988 AAPAPQAAPAPAQAAGNGAQWDSLQQMLSQAGLTLATTDPVKLRAAQEAAAAFVPAPRVP 1047 A A APA G +LQ +++ AG+ TD KL+AA+E AA V PR P Sbjct: 950 VAST--VAEAPALPIG------TLQAVVADAGMMWVHTDAQKLQAAKEDAARTVTPPRAP 1001 Query: 1048 RERKPLPPQSTEPLVQVETRR 1068 RERKPLPP P+V VET R Sbjct: 1002 RERKPLPPIQQGPMVLVETSR 1022 >C3X9I5.1 C3X9I5_OXAFO Ribonuclease E protein Length = 977 Score = 975 bits (2521), Expect = 0.0, Method: Compositional matrix adjust. Identities = 481/669 (71%), Positives = 545/669 (81%), Gaps = 38/669 (5%) Query: 1 MLFNATQQEELRVAIVDGQKLIDIDIETTGREQRKSNIYKGVITRIEPSLEACFVNYGEE 60 MLFNATQQEELRVAIVDGQKLIDIDIE+ RE KSNIYK VITRIEPSLEACFVNYGE+ Sbjct: 4 MLFNATQQEELRVAIVDGQKLIDIDIESNSRELHKSNIYKAVITRIEPSLEACFVNYGED 63 Query: 61 RHGFLPFKEVARSYFKEGIDVRNASIKEALREGQEIIVQVEKEERGNKGAALTSFISLAG 120 RHGFLPFKEVARS FK+G+DVR+A+IK+A+ EGQEI+VQVEKEERGNKGAALT+FISLAG Sbjct: 64 RHGFLPFKEVARSLFKDGVDVRSAAIKDAMTEGQEIMVQVEKEERGNKGAALTTFISLAG 123 Query: 121 RYLVLMPNNPRGGGVSRRVEGEDRQELRETMDKLDLPNGMSVIARTAGIGRNVDELQWDL 180 RYLVLMPNNPRGGGVSRRVEGE+RQELRE MDKL++P GMS+IARTAGIGR+ +ELQWDL Sbjct: 124 RYLVLMPNNPRGGGVSRRVEGEERQELREAMDKLEVPAGMSIIARTAGIGRSTEELQWDL 183 Query: 181 NYLMQLWRAIEGAGQSASGAFLIYQESSLVIRAIRDYFQPDIGEILIDTDDIHDQAQQFM 240 NYL+QLW AIEGAG SA GAFLIY ESSLVIRAIRDYFQPDIGEILIDTD+I++QA+QFM Sbjct: 184 NYLLQLWNAIEGAGSSAPGAFLIYHESSLVIRAIRDYFQPDIGEILIDTDEIYEQARQFM 243 Query: 241 AHVMPDMVHRVKRYRDDVPLFSRFQIEHQIETAYSRTVPLPSGGAIVIDHTEALVSVDVN 300 +HVMPDMV+RVKRYRDDVPLFSRFQIEHQIETAYSR V LPSGG+IVIDHTEALV+VDVN Sbjct: 244 SHVMPDMVNRVKRYRDDVPLFSRFQIEHQIETAYSRVVSLPSGGSIVIDHTEALVAVDVN 303 Query: 301 SARATRGSDIETTAFNTNLEAADEVARQLRLRDLGGLIVIDFIDMENSKNQREVEGRLKD 360 SAR+TRG+DIETTAFNTN EAA+EVARQLRLRDLGGLIVIDFIDME++KN+RE+E RLK+ Sbjct: 304 SARSTRGTDIETTAFNTNCEAAEEVARQLRLRDLGGLIVIDFIDMESAKNRREIENRLKE 363 Query: 361 ALHHDRARVQMGKISRFGLMELSRQRLRPSLSEGSHVTCPRCNGTGHIRDTESSALQVLR 420 ALH+DRARVQM KI+RFGLMELSRQRLRPSLSEGSH+TCPRCNGTGHIRDTESSALQVLR Sbjct: 364 ALHYDRARVQMDKITRFGLMELSRQRLRPSLSEGSHITCPRCNGTGHIRDTESSALQVLR 423 Query: 421 IIQEEAMKENSAAIHVQAPVDVAAFLLNEKRGEILKIETRHRVTVIMIPNKHLETPHYKM 480 II+EE+MKE+SA IHVQ PVDVAAFLLNEKRGEI+K+E RH+V +++IPN HLETPHYK+ Sbjct: 424 IIEEESMKESSAVIHVQIPVDVAAFLLNEKRGEIMKVENRHKVEIVLIPNTHLETPHYKL 483 Query: 481 ERIKHDDPRLDDAQASYTMAEQADTDIGYSKRQKEDVRPRQEAVVKGITPDQP-APIVER 539 ERIKHDDPRL++ Q SY +AEQ+D D+ ++KRQKE V+P QEA+VK I P AP+VER Sbjct: 484 ERIKHDDPRLEEPQVSYKLAEQSDDDMSFAKRQKEPVKPVQEAMVKNIPEGIPAAPVVER 543 Query: 540 KAPEPVAAPVPPPTLAPESGLLGKIFSFF----RKKPVAPVAAPAPVEAK--APAKREGE 593 K PVA E G K+ F + P P PA A+ R Sbjct: 544 K---PVAQ---------EQGFFSKLLGIFGIGKEETPAEPEEKPAKNNARKGRNNDRNRN 591 Query: 594 RNGRGGDRNGRNR-------------------NRNERGDRAERGERAERNGEQRNGRNPA 634 RN G+R+ + R N N R R + A+RN QR R PA Sbjct: 592 RNRNRGERDDKARTPVSPATPVAAAPEADETENANAGQKRGRRPKNADRNDRQREDRKPA 651 Query: 635 AAELKAGEA 643 E A A Sbjct: 652 RNEENADSA 660 >B1YVK1.1 B1YVK1_BURA4 Ribonuclease, Rne/Rng family Length = 1059 Score = 974 bits (2518), Expect = 0.0, Method: Compositional matrix adjust. Identities = 513/725 (70%), Positives = 583/725 (80%), Gaps = 32/725 (4%) Query: 1 MLFNATQQEELRVAIVDGQKLIDIDIETTGREQRKSNIYKGVITRIEPSLEACFVNYGEE 60 MLFNATQQEELRVAIVDGQKLIDIDIET GREQRK NIYKGVITRIEPSLEACFVNYGE+ Sbjct: 4 MLFNATQQEELRVAIVDGQKLIDIDIETAGREQRKGNIYKGVITRIEPSLEACFVNYGED 63 Query: 61 RHGFLPFKEVARSYFKEGIDVRNASIKEALREGQEIIVQVEKEERGNKGAALTSFISLAG 120 RHGFLPFKEVAR YFK+GID+R+A I++ALREGQE+IVQVEKEERGNKGAALT+FISLAG Sbjct: 64 RHGFLPFKEVARQYFKDGIDMRSARIQDALREGQELIVQVEKEERGNKGAALTTFISLAG 123 Query: 121 RYLVLMPNNPRGGGVSRRVEGEDRQELRETMDKLDLPNGMSVIARTAGIGRNVDELQWDL 180 RYLVLMPNNPRGGGVSRR+EG++RQELRETM +L +P+GMS+IARTAGIGR+ +ELQWDL Sbjct: 124 RYLVLMPNNPRGGGVSRRIEGDERQELRETMAQLQIPDGMSMIARTAGIGRSAEELQWDL 183 Query: 181 NYLMQLWRAIEGAGQSASGA--FLIYQESSLVIRAIRDYFQPDIGEILIDTDDIHDQAQQ 238 NYL+QLWRAIE A QS + LIY ESSLVIRAIRDYFQPDIGEILIDT +IHDQA+ Sbjct: 184 NYLLQLWRAIEAASQSGNAGQPMLIYLESSLVIRAIRDYFQPDIGEILIDTTEIHDQARA 243 Query: 239 FMAHVMPDMVHRVKRYRDDVPLFSRFQIEHQIETAYSRTVPLPSGGAIVIDHTEALVSVD 298 FM VMPD V +VKRY DDVPLFSRFQIEHQIETAYSRTVPLPSGGAIVIDHTEALV++D Sbjct: 244 FMDIVMPDNVSKVKRYHDDVPLFSRFQIEHQIETAYSRTVPLPSGGAIVIDHTEALVAID 303 Query: 299 VNSARATRGSDIETTAFNTNLEAADEVARQLRLRDLGGLIVIDFIDMENSKNQREVEGRL 358 VNSARAT+G+DIE TA TNLEAADEVARQLRLRDLGGLIVIDFIDME++K+QREVE RL Sbjct: 304 VNSARATKGADIEETATRTNLEAADEVARQLRLRDLGGLIVIDFIDMESAKSQREVEQRL 363 Query: 359 KDALHHDRARVQMGKISRFGLMELSRQRLRPSLSEGSHVTCPRCNGTGHIRDTESSALQV 418 KDAL HDRARVQMGKISRFGLMELSRQRLRP+LSEGSHVTCPRCNGTGHIRDTESSALQV Sbjct: 364 KDALKHDRARVQMGKISRFGLMELSRQRLRPALSEGSHVTCPRCNGTGHIRDTESSALQV 423 Query: 419 LRIIQEEAMKENSAAIHVQAPVDVAAFLLNEKRGEILKIETRHRVTVIMIPNKHLETPHY 478 LRIIQEEAMKEN+AAIH Q PV+V AFLLNEKR EI KIE+R +V +++IPNKHL+TPHY Sbjct: 424 LRIIQEEAMKENTAAIHCQVPVEVTAFLLNEKRQEINKIESRFKVGIVLIPNKHLDTPHY 483 Query: 479 KMERIKHDDPRLDDAQASYTMAEQA----DTDIGYSKRQKEDVRPRQEAVVKGITPDQPA 534 K+ER++HDD RLDD +AS+ MAE+A +++ GYSKR DV+P+QEA VKGITP++PA Sbjct: 484 KLERLRHDDARLDDPRASWKMAEEAARELESETGYSKRTA-DVKPKQEAAVKGITPERPA 542 Query: 535 PIVE-RKAPEPVAAPVPPPTLAPESGLLGKIFSFFRKKPVAPVAAPAPVEAKAPAKREGE 593 P ++ EPVAA P +A G +G + F P A AP AK A R Sbjct: 543 PSAAPQRPAEPVAAAPAPVAVASNGGFIGWLKGLFGMSPAPAPAPVAPAPAKEQAARPA- 601 Query: 594 RNGRGGDRNGRNRNRNERGDRAERGERAERNG---EQRNGRNPAAAELKAGEAAE--GKQ 648 R R E+ ++ R G + + GR+ AA + E GK+ Sbjct: 602 ------------RERTEKTEQRGGDRNRNRRGGAQQAQGGRDQAATGRGQSQRQEREGKE 649 Query: 649 VRAPRPPREPKEGREPREPRELQAQARDGQEVKEARRNEPREAREPREAREPREGREPRE 708 +R PR PRE +E RE REPRE +R+G+E +E R PRE REPRE RE RE REPRE Sbjct: 650 IREPREPREGREPRESREPRE----SREGRESREGR--GPREGREPREPRESRENREPRE 703 Query: 709 GREPR 713 REPR Sbjct: 704 SREPR 708