BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0037.0027.p (294 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value D8IRM0.1 D8IRM0_HERSS Transglycosylase signal peptide protein 508 e-142 A4G395.1 A4G395_HERAR Putative Lytic transglycosylase 225 5e-57 F1W2E7.1 F1W2E7_9BURK Lytic transglycosylase, catalytic 225 6e-57 Q46YR4.1 Q46YR4_CUPPJ Lytic transglycosylase, catalytic 204 1e-50 B5S6M0.1 B5S6M0_RALSO Transglycosylase protein EC=3.2.1.- 201 1e-49 B5SEX9.1 B5SEX9_RALSO Transglycosylase protein EC=3.2.1.- 201 1e-49 A3RP65.1 A3RP65_RALSO Soluble lytic murein transglycosylase EC=3... 201 1e-49 D8NLU9.1 D8NLU9_RALSO Putative lytic transglycosylase EC=3.2.1.- 201 1e-49 Q8Y0R6.1 Q8Y0R6_RALSO Putative transglycosylase signal peptide p... 197 1e-48 D8NCE0.1 D8NCE0_RALSO Putative lytic transglycosylase EC=3.2.1.- 196 4e-48 >D8IRM0.1 D8IRM0_HERSS Transglycosylase signal peptide protein Length = 250 Score = 508 bits (1307), Expect = e-142, Method: Compositional matrix adjust. Identities = 250/250 (100%), Positives = 250/250 (100%) Query: 45 MRVEAADSSSDGGSKGSGSKKAQSIVYRYTDADGAVHFYAQTLDDPDKLMASSAALLNHA 104 MRVEAADSSSDGGSKGSGSKKAQSIVYRYTDADGAVHFYAQTLDDPDKLMASSAALLNHA Sbjct: 1 MRVEAADSSSDGGSKGSGSKKAQSIVYRYTDADGAVHFYAQTLDDPDKLMASSAALLNHA 60 Query: 105 ESKEAVTPADPPFVRTMLSHRDARKYDPLLTQAASEFGLDAALLKAVMTAESGFNAKAVS 164 ESKEAVTPADPPFVRTMLSHRDARKYDPLLTQAASEFGLDAALLKAVMTAESGFNAKAVS Sbjct: 61 ESKEAVTPADPPFVRTMLSHRDARKYDPLLTQAASEFGLDAALLKAVMTAESGFNAKAVS 120 Query: 165 SKGAVGLMQILPDTAERYGLQGDRRKTLHQKLTDPKINIRLAARYLRDLMAMFPQHVELA 224 SKGAVGLMQILPDTAERYGLQGDRRKTLHQKLTDPKINIRLAARYLRDLMAMFPQHVELA Sbjct: 121 SKGAVGLMQILPDTAERYGLQGDRRKTLHQKLTDPKINIRLAARYLRDLMAMFPQHVELA 180 Query: 225 IASYNAGEGAVQKYGNKIPPYPETQGYVRLVSRFYQLYRPDGGATLASAGSARLKVTLPP 284 IASYNAGEGAVQKYGNKIPPYPETQGYVRLVSRFYQLYRPDGGATLASAGSARLKVTLPP Sbjct: 181 IASYNAGEGAVQKYGNKIPPYPETQGYVRLVSRFYQLYRPDGGATLASAGSARLKVTLPP 240 Query: 285 HAPATASGND 294 HAPATASGND Sbjct: 241 HAPATASGND 250 >A4G395.1 A4G395_HERAR Putative Lytic transglycosylase Length = 269 Score = 225 bits (574), Expect = 5e-57, Method: Compositional matrix adjust. Identities = 114/200 (57%), Positives = 138/200 (69%), Gaps = 5/200 (2%) Query: 70 VYRYTDADGAVHFYAQTLDDPDKLMASSAALLNHAE-----SKEAVTPADPPFVRTMLSH 124 VY Y DA G HF + LD +L A +LN A S E + P R + H Sbjct: 24 VYGYIDASGEAHFATEKLDQRYQLFARGDQVLNAARLVPLGSTEKGAEKETPLFRYLSQH 83 Query: 125 RDARKYDPLLTQAASEFGLDAALLKAVMTAESGFNAKAVSSKGAVGLMQILPDTAERYGL 184 + +KY+ LL AA+EF LD ALLKAVM AESGFN AVS KGAVGLMQ++P TAER+GL Sbjct: 84 PNLKKYEKLLNDAANEFNLDPALLKAVMAAESGFNPNAVSPKGAVGLMQLMPATAERFGL 143 Query: 185 QGDRRKTLHQKLTDPKINIRLAARYLRDLMAMFPQHVELAIASYNAGEGAVQKYGNKIPP 244 Q DR+KT+ QKLTDPK NIRL ARYLR L M+P L +ASYNAGEGA+QKY N IPP Sbjct: 144 QADRKKTVAQKLTDPKTNIRLGARYLRVLRDMYPNQQHLVLASYNAGEGAIQKYNNTIPP 203 Query: 245 YPETQGYVRLVSRFYQLYRP 264 +PET+ YV+LV++FY+LY+P Sbjct: 204 FPETRNYVKLVTQFYRLYQP 223 >F1W2E7.1 F1W2E7_9BURK Lytic transglycosylase, catalytic Length = 240 Score = 225 bits (574), Expect = 6e-57, Method: Compositional matrix adjust. Identities = 119/240 (49%), Positives = 157/240 (65%), Gaps = 15/240 (6%) Query: 63 SKKAQSIVYRYTDADGAVHFYAQTLDDPDKLMASSAALLNHAESKEAVTPADP-----PF 117 S A++ VY Y DA G HF + LD+ +L + + ++ +TPA P P Sbjct: 7 SSAARADVYGYVDAQGDTHFSTEALDERYQLFIKGDGVFDSSQ----LTPAAPEPLRTPL 62 Query: 118 VRTMLSHRDARKYDPLLTQAASEFGLDAALLKAVMTAESGFNAKAVSSKGAVGLMQILPD 177 + + H + +K++ +L AA+EF +D AL+KA+M AESGFN A+S KGA+GLMQI+P Sbjct: 63 FKVLTEHPNLKKFEDVLAAAAAEFKVDLALMKAMMAAESGFNPAAISPKGAIGLMQIMPA 122 Query: 178 TAERYGLQGDRRKTLHQKLTDPKINIRLAARYLRDLMAMFPQHVELAIASYNAGEGAVQK 237 TAERYGL GD RK++ QKL+DP N+RLAARYLR+L A+FP L IASYNAGEGAVQK Sbjct: 123 TAERYGLVGDARKSIQQKLSDPTTNVRLAARYLRELSALFPNQQALVIASYNAGEGAVQK 182 Query: 238 YGNKIPPYPETQGYVRLVSRFYQLYRPDGGATLASAGSARLKVTLPPH----APATASGN 293 Y N IPPYPET+ YVRLV++FYQ Y P A + G R+ +T+P AP T + N Sbjct: 183 YRNTIPPYPETRNYVRLVTQFYQFYVPQVPALAVATG--RIHLTIPGRSNMPAPLTLNAN 240 >Q46YR4.1 Q46YR4_CUPPJ Lytic transglycosylase, catalytic Length = 260 Score = 204 bits (519), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 101/225 (44%), Positives = 144/225 (64%), Gaps = 8/225 (3%) Query: 66 AQSIVYRYTDADGAVHFYAQTLDDPDKLMASSAALLNHAESKEAVTPAD---PPFVRTML 122 A + +Y + DADG HF + LD+ KL + + A +D R ++ Sbjct: 29 AHAELYGFVDADGIAHFADRKLDERYKLFMREGGSFDTSRESSAAPKSDLEQHKLYRYVV 88 Query: 123 SHRDARKYDPLLTQAASEFGLDAALLKAVMTAESGFNAKAVSSKGAVGLMQILPDTAERY 182 +H + K +P++ Q A + +D AL+KAVM ESGFN AVS KGA+GLMQ++PDT R+ Sbjct: 89 NHPNIAKVEPMIRQIADKQDVDPALVKAVMAVESGFNPSAVSPKGAIGLMQVIPDTGARF 148 Query: 183 GLQGDRRKTLHQKLTDPKINIRLAARYLRDLMAMFPQHVELAIASYNAGEGAVQKYGNKI 242 G+ GD R+++ +KL DP+ NI RYLR LM +FP ++EL +A+YNAGEGAVQ+Y N+I Sbjct: 149 GVSGDARRSVEEKLADPRTNISAGVRYLRWLMELFPDNIELVLAAYNAGEGAVQRYNNRI 208 Query: 243 PPYPETQGYVRLVSRFYQLYRPDGGATL-----ASAGSARLKVTL 282 PPYPETQ YV V +FY+LY+P GGA + A G +R+K+ + Sbjct: 209 PPYPETQQYVSTVLQFYRLYKPGGGAVVTRTSAAVGGPSRVKMVI 253 >B5S6M0.1 B5S6M0_RALSO Transglycosylase protein EC=3.2.1.- Length = 282 Score = 201 bits (510), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 109/221 (49%), Positives = 136/221 (61%), Gaps = 24/221 (10%) Query: 66 AQSIVYRYTDADGAVHFYAQTLDDPDKLMASSAALLNHAESKEAVTPADPP--------- 116 A++ VY Y D +G HF A LDD L AA+ ES A DPP Sbjct: 22 ARAGVYGYIDENGLAHFAASRLDDRYVLFMKGAAVA--GESGIAQPAGDPPEAEAYLNAT 79 Query: 117 -------------FVRTMLSHRDARKYDPLLTQAASEFGLDAALLKAVMTAESGFNAKAV 163 R +L H +A +PL+ QAA G+D AL+KAV+ AESGFN +AV Sbjct: 80 RRDALDNAGMRQRLARAVLQHPNAPTVEPLIRQAAHRHGVDPALVKAVIAAESGFNPQAV 139 Query: 164 SSKGAVGLMQILPDTAERYGLQGDRRKTLHQKLTDPKINIRLAARYLRDLMAMFPQHVEL 223 S KGA+GLMQ++P+T ERYG+ GD R+TL QKL DPKINI RYL DL+ MF ++EL Sbjct: 140 SPKGAIGLMQVIPETGERYGVTGDARRTLAQKLADPKINIATGVRYLSDLLRMFSGNLEL 199 Query: 224 AIASYNAGEGAVQKYGNKIPPYPETQGYVRLVSRFYQLYRP 264 +A+YNAGEGAVQK+GN IPPY ETQ YV+ V +FY+ Y P Sbjct: 200 VLAAYNAGEGAVQKHGNDIPPYAETQNYVKTVLQFYRYYNP 240 >B5SEX9.1 B5SEX9_RALSO Transglycosylase protein EC=3.2.1.- Length = 282 Score = 201 bits (510), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 109/221 (49%), Positives = 136/221 (61%), Gaps = 24/221 (10%) Query: 66 AQSIVYRYTDADGAVHFYAQTLDDPDKLMASSAALLNHAESKEAVTPADPP--------- 116 A++ VY Y D +G HF A LDD L AA+ ES A DPP Sbjct: 22 ARADVYGYIDENGLAHFAASRLDDRYVLFMKGAAVA--GESGIAQPAGDPPEAEAYLNAT 79 Query: 117 -------------FVRTMLSHRDARKYDPLLTQAASEFGLDAALLKAVMTAESGFNAKAV 163 R +L H +A +PL+ QAA G+D AL+KAV+ AESGFN +AV Sbjct: 80 RRDALDNAGMRQRLARAVLQHPNAPTVEPLIRQAAHRHGVDPALVKAVIAAESGFNPQAV 139 Query: 164 SSKGAVGLMQILPDTAERYGLQGDRRKTLHQKLTDPKINIRLAARYLRDLMAMFPQHVEL 223 S KGA+GLMQ++P+T ERYG+ GD R+TL QKL DPKINI RYL DL+ MF ++EL Sbjct: 140 SPKGAIGLMQVIPETGERYGVTGDARRTLAQKLADPKINIATGVRYLSDLLRMFSGNLEL 199 Query: 224 AIASYNAGEGAVQKYGNKIPPYPETQGYVRLVSRFYQLYRP 264 +A+YNAGEGAVQK+GN IPPY ETQ YV+ V +FY+ Y P Sbjct: 200 VLAAYNAGEGAVQKHGNDIPPYAETQNYVKTVLQFYRYYNP 240 >A3RP65.1 A3RP65_RALSO Soluble lytic murein transglycosylase EC=3.2.1.- Length = 282 Score = 201 bits (510), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 109/221 (49%), Positives = 136/221 (61%), Gaps = 24/221 (10%) Query: 66 AQSIVYRYTDADGAVHFYAQTLDDPDKLMASSAALLNHAESKEAVTPADPP--------- 116 A++ VY Y D +G HF A LDD L AA+ ES A DPP Sbjct: 22 ARADVYGYIDENGLAHFAASRLDDRYVLFMKGAAVA--GESGIAQPAGDPPEAEAYLNAT 79 Query: 117 -------------FVRTMLSHRDARKYDPLLTQAASEFGLDAALLKAVMTAESGFNAKAV 163 R +L H +A +PL+ QAA G+D AL+KAV+ AESGFN +AV Sbjct: 80 RRDALDNAGMRQRLARAVLQHPNAPTVEPLIRQAAHRHGVDPALVKAVIAAESGFNPQAV 139 Query: 164 SSKGAVGLMQILPDTAERYGLQGDRRKTLHQKLTDPKINIRLAARYLRDLMAMFPQHVEL 223 S KGA+GLMQ++P+T ERYG+ GD R+TL QKL DPKINI RYL DL+ MF ++EL Sbjct: 140 SPKGAIGLMQVIPETGERYGVTGDARRTLAQKLADPKINIATGVRYLSDLLRMFSGNLEL 199 Query: 224 AIASYNAGEGAVQKYGNKIPPYPETQGYVRLVSRFYQLYRP 264 +A+YNAGEGAVQK+GN IPPY ETQ YV+ V +FY+ Y P Sbjct: 200 VLAAYNAGEGAVQKHGNDIPPYAETQNYVKTVLQFYRYYNP 240 >D8NLU9.1 D8NLU9_RALSO Putative lytic transglycosylase EC=3.2.1.- Length = 282 Score = 201 bits (510), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 112/238 (47%), Positives = 146/238 (61%), Gaps = 28/238 (11%) Query: 64 KKAQSIVYRYTDADGAVHFYAQTLDDPDKLMASSAALLNHAESKEAVTPADPP------- 116 + A++ VY Y D +G HF A LDD L AA+ ES A DPP Sbjct: 20 QPARADVYGYIDENGLAHFAASRLDDRYVLFMKGAAVA--GESGIAQPAGDPPDADAYLN 77 Query: 117 ---------------FVRTMLSHRDARKYDPLLTQAASEFGLDAALLKAVMTAESGFNAK 161 VR ++ H +A +PL+ QAA G+D AL+KAV+ AESGFN + Sbjct: 78 ATRRDALDNAGMRQRLVRAVMQHPNAPTVEPLIRQAAHRHGVDPALVKAVIAAESGFNPQ 137 Query: 162 AVSSKGAVGLMQILPDTAERYGLQGDRRKTLHQKLTDPKINIRLAARYLRDLMAMFPQHV 221 AVS KGA+GLMQ++P+T ERYG+ GD R+TL QKL DP+INI RYL DL+ MF ++ Sbjct: 138 AVSPKGAIGLMQVIPETGERYGVTGDARRTLAQKLADPQINIATGVRYLSDLLRMFSGNL 197 Query: 222 ELAIASYNAGEGAVQKYGNKIPPYPETQGYVRLVSRFYQLYRP----DGGATLASAGS 275 EL +A+YNAGEGAVQK+GN IPPY ETQ YV+ V +FY+ Y P G T+++AG+ Sbjct: 198 ELVLAAYNAGEGAVQKHGNDIPPYAETQNYVKTVLQFYRYYNPVAAVPGLMTVSAAGA 255 >Q8Y0R6.1 Q8Y0R6_RALSO Putative transglycosylase signal peptide protein EC=3.2.1.- Length = 285 Score = 197 bits (501), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 113/247 (45%), Positives = 146/247 (59%), Gaps = 29/247 (11%) Query: 66 AQSIVYRYTDADGAVHFYAQTLDDPDKLMASSAALLNHAESKEAVTPA-DPP-------- 116 A++ VY Y D +G HF A+ LDD L A+ A + PA DPP Sbjct: 22 ARADVYGYIDENGLAHFAAERLDDRYVLFMKGTAV---AGASGIAQPAGDPPDADADRNA 78 Query: 117 --------------FVRTMLSHRDARKYDPLLTQAASEFGLDAALLKAVMTAESGFNAKA 162 R +L H + + +PL+ QAA + G+D AL+KAV+ AESGFN +A Sbjct: 79 AGRDAPDNDGMRRRLARAVLQHPNVPRVEPLIRQAARKHGVDPALVKAVIAAESGFNPQA 138 Query: 163 VSSKGAVGLMQILPDTAERYGLQGDRRKTLHQKLTDPKINIRLAARYLRDLMAMFPQHVE 222 VS KGA+GLMQ++P+T ERYG+ GD R+TL QKL DP++NI RYL DL+ MF +E Sbjct: 139 VSPKGAIGLMQVIPETGERYGVTGDARRTLAQKLADPRVNIATGVRYLSDLLRMFSGDLE 198 Query: 223 LAIASYNAGEGAVQKYGNKIPPYPETQGYVRLVSRFYQLYRP---DGGATLASAGSARLK 279 LA+A+YNAGEGAVQK+GN IPPY ETQ YV+ V +FY+ Y P G SAG A Sbjct: 199 LALAAYNAGEGAVQKHGNDIPPYAETQNYVKTVLQFYRYYNPVTAAPGLMTVSAGGAMAT 258 Query: 280 VTLPPHA 286 P H+ Sbjct: 259 TRKPGHS 265 >D8NCE0.1 D8NCE0_RALSO Putative lytic transglycosylase EC=3.2.1.- Length = 285 Score = 196 bits (498), Expect = 4e-48, Method: Compositional matrix adjust. Identities = 111/244 (45%), Positives = 143/244 (58%), Gaps = 23/244 (9%) Query: 66 AQSIVYRYTDADGAVHFYAQTLDDPDKLMASSAALLN------------HAESKEAVTPA 113 A++ VY Y D +G HF A LDD L A+ A++ Sbjct: 22 ARADVYGYIDENGLAHFAASRLDDRYVLFMKGTAVAGASGIAQPAGDTPDADADRNAAGR 81 Query: 114 DPP--------FVRTMLSHRDARKYDPLLTQAASEFGLDAALLKAVMTAESGFNAKAVSS 165 D P R +L H + + +PL+ QAA + G+D AL+KAV+ AESGFN +AVS Sbjct: 82 DAPDNDGMRRRLARAVLQHPNVPRVEPLIRQAARKHGVDPALVKAVIAAESGFNPQAVSP 141 Query: 166 KGAVGLMQILPDTAERYGLQGDRRKTLHQKLTDPKINIRLAARYLRDLMAMFPQHVELAI 225 KGA+GLMQ++P+T ERYG+ GD R+TL QKL DP++NI RYL DL+ MF +ELA+ Sbjct: 142 KGAIGLMQVIPETGERYGVTGDARRTLAQKLADPRVNIATGVRYLSDLLRMFSGDLELAL 201 Query: 226 ASYNAGEGAVQKYGNKIPPYPETQGYVRLVSRFYQLYRPDG---GATLASAGSARLKVTL 282 A+YNAGEGAVQK+GN IPPY ETQ YV+ V +FY+ Y P G SAG A Sbjct: 202 AAYNAGEGAVQKHGNDIPPYAETQNYVKTVLQFYRYYNPATAAPGLMTVSAGGAMATTHK 261 Query: 283 PPHA 286 P HA Sbjct: 262 PGHA 265