BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0036.0038.p (281 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value D8IRB8.1 D8IRB8_HERSS Shikimate 5-dehydrogenase protein EC=1.1.1.25 566 e-159 C9Y812.1 C9Y812_9BURK Putative uncharacterized protein 230 2e-58 C6B7N6.1 C6B7N6_RHILS Shikimate dehydrogenase substrate binding ... 230 2e-58 Q1M6V6.1 Q1M6V6_RHIL3 Putative shikimate 5-dehydrogenase 229 3e-58 B6A3Y2.1 B6A3Y2_RHILW Shikimate dehydrogenase substrate binding ... 228 7e-58 A8HX22.1 A8HX22_AZOC5 Shikimate dehydrogenase family protein 221 8e-56 C8XHT6.1 C8XHT6_NAKMY Shikimate dehydrogenase substrate binding ... 216 2e-54 E6UWV4.1 E6UWV4_VARPD Shikimate dehydrogenase substrate binding ... 207 1e-51 B9Z063.1 B9Z063_9NEIS Shikimate dehydrogenase substrate binding ... 205 7e-51 Q46R57.1 Q46R57_CUPPJ Shikimate dehydrogenase EC=1.1.1.25 202 4e-50 >D8IRB8.1 D8IRB8_HERSS Shikimate 5-dehydrogenase protein EC=1.1.1.25 Length = 281 Score = 566 bits (1459), Expect = e-159, Method: Compositional matrix adjust. Identities = 277/281 (98%), Positives = 280/281 (99%) Query: 1 MKAITGTTRIFPVIGWPVEQVKAPTLFNAYFEHHGIDARVIPFKIEPERYCEAVRMFMKT 60 MKAITGTTRIFPVIGWPVEQVKAPTLFNAYFEHHGIDARVIPFKIEPERYCEAVRMFMKT Sbjct: 1 MKAITGTTRIFPVIGWPVEQVKAPTLFNAYFEHHGIDARVIPFKIEPERYCEAVRMFMKT 60 Query: 61 ENVGGIFVSIPHKPMTLEAVEQSTLRARVAGACNAVYRDADGVIWGDLIDGEGFIRALAR 120 ENVGGIFVSIPHKPMTLEAVEQSTLRARVAGACNAVYRDADGVIWGDLIDGEGFIRALAR Sbjct: 61 ENVGGIFVSIPHKPMTLEAVEQSTLRARVAGACNAVYRDADGVIWGDLIDGEGFIRALAR 120 Query: 121 TAADRPLVWNKTRALVVGTGGVGCAIVASLAAQGVAEISVFDTNRAGAEALLARTAAAFP 180 TAADRPLVWN+TRALVVGTGGVGCAIVASLAAQGVAEISVFDTNRAGAEALLAR AAAFP Sbjct: 121 TAADRPLVWNQTRALVVGTGGVGCAIVASLAAQGVAEISVFDTNRAGAEALLARAAAAFP 180 Query: 181 ATRVGFAQPDASGFDLLVNCTPLGMHVGDPMPFALEGVRRDAIVADCGMKIEMSQLLVQA 240 ATRVGFAQPDASGFDLLVNCTPLGMHVGDPMPFALEGVRRDAIVADCGMKIEMSQLLVQA Sbjct: 181 ATRVGFAQPDASGFDLLVNCTPLGMHVGDPMPFALEGVRRDAIVADCGMKIEMSQLLVQA 240 Query: 241 QALGCRIQKGKEMLIEQAPLYLDLFGWPGVAADDFRALEAL 281 QALGCRIQKGKEMLIEQAPLYL+LFGWPGV+ADDFRALEAL Sbjct: 241 QALGCRIQKGKEMLIEQAPLYLELFGWPGVSADDFRALEAL 281 >C9Y812.1 C9Y812_9BURK Putative uncharacterized protein Length = 279 Score = 230 bits (587), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 115/278 (41%), Positives = 166/278 (59%), Gaps = 4/278 (1%) Query: 4 ITGTTRIFPVIGWPVEQVKAPTLFNAYFEHHGIDARVIPFKIEPERYCEAVRMFMKTENV 63 I G T + +G+P KAP ++N +FE G++A V+P +PE + +R + N+ Sbjct: 3 INGNTELIVHLGYPTHAFKAPMIYNPWFEKAGVNAVVVPMGSKPEDFPGFLRSVFQLSNI 62 Query: 64 GGIFVSIPHKPMTLEAVEQSTLRARVAGACNAVYRDADGVIWGDLIDGEGFIRALARTAA 123 G +++PHK +T V++ + A++AGACNAV G + GD+ DG GF+R + R Sbjct: 63 RGALITMPHKVVTTTLVDELSPTAQIAGACNAVRLGPQGQLQGDMFDGAGFVRGVLR--- 119 Query: 124 DRPLVWNKTRALVVGTGGVGCAIVASLAAQGVAEISVFDTNRAGAEALLARTAAAFPATR 183 + LV RALVVG+GGVGCAI ASLAA+G++ +++FD N AE L AR +P Sbjct: 120 -KGLVLKGARALVVGSGGVGCAIAASLAAEGLSALALFDVNAEAAEGLAARLRQHYPQID 178 Query: 184 VGFAQPDASGFDLLVNCTPLGMHVGDPMPFALEGVRRDAIVADCGMKIEMSQLLVQAQAL 243 V D +GFDL+VN TPLGM+ GDPMP + + V + MK E + L +A Sbjct: 179 VSTGSTDPAGFDLVVNATPLGMNEGDPMPLDVSRLSASTFVGEVVMKSETTAFLAEAILR 238 Query: 244 GCRIQKGKEMLIEQAPLYLDLFGWPGVAADDFRALEAL 281 GC++Q G +ML EQ P YL+ FG P +AD+ R+L L Sbjct: 239 GCKVQVGSDMLFEQIPAYLEFFGLPSTSADELRSLATL 276 >C6B7N6.1 C6B7N6_RHILS Shikimate dehydrogenase substrate binding domain protein Length = 276 Score = 230 bits (586), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 113/278 (40%), Positives = 162/278 (58%), Gaps = 4/278 (1%) Query: 4 ITGTTRIFPVIGWPVEQVKAPTLFNAYFEHHGIDARVIPFKIEPERYCEAVRMFMKTENV 63 ITGTT++ +G+P E KAP ++N YFE +GIDA V+P P Y +++ + N+ Sbjct: 2 ITGTTKLIAHLGYPTESFKAPLIYNPYFEKNGIDAVVVPMGCRPADYPVFLKLLFRLSNI 61 Query: 64 GGIFVSIPHKPMTLEAVEQSTLRARVAGACNAVYRDADGVIWGDLIDGEGFIRALARTAA 123 G +++PHK T+ +++++ A+VAG+CNAV +DG + GD+ DGEGF+R + R Sbjct: 62 HGALITMPHKISTMALLDETSTNAKVAGSCNAVRLGSDGRLIGDMFDGEGFVRGVLRKGK 121 Query: 124 DRPLVWNKTRALVVGTGGVGCAIVASLAAQGVAEISVFDTNRAGAEALLARTAAAFPATR 183 RAL+ G GGVG AI ASLA GV +++FD N A A ALL R +P Sbjct: 122 Q----VEGARALIAGAGGVGSAIAASLAQAGVEHLAIFDANEATATALLDRLKKYYPQLE 177 Query: 184 VGFAQPDASGFDLLVNCTPLGMHVGDPMPFALEGVRRDAIVADCGMKIEMSQLLVQAQAL 243 V D GFD++VN TPLGM GDP+P ++ + V + M E++ L +A Sbjct: 178 VTVGSADPEGFDIVVNATPLGMRRGDPLPIDIDRISPSTFVGEVVMTKEITPFLEAVRAR 237 Query: 244 GCRIQKGKEMLIEQAPLYLDLFGWPGVAADDFRALEAL 281 GC Q G +ML EQ P YL+ F +P AD+ RA+ L Sbjct: 238 GCAFQVGTDMLFEQIPAYLEFFEFPTTTADNLRAIAKL 275 >Q1M6V6.1 Q1M6V6_RHIL3 Putative shikimate 5-dehydrogenase Length = 276 Score = 229 bits (584), Expect = 3e-58, Method: Compositional matrix adjust. Identities = 112/278 (40%), Positives = 162/278 (58%), Gaps = 4/278 (1%) Query: 4 ITGTTRIFPVIGWPVEQVKAPTLFNAYFEHHGIDARVIPFKIEPERYCEAVRMFMKTENV 63 ITGTT++ +G+P E KAP ++N YFE +GIDA V+P PE Y +++ + N+ Sbjct: 2 ITGTTKLIAHLGYPTESFKAPLIYNPYFEKNGIDAVVVPMGCRPEDYPAFLKLLFRLSNI 61 Query: 64 GGIFVSIPHKPMTLEAVEQSTLRARVAGACNAVYRDADGVIWGDLIDGEGFIRALARTAA 123 G +++PHK T+ +++++ A+VAG+CNAV +DG + GD+ DGEGF+R + R Sbjct: 62 HGALITMPHKISTMALLDETSTNAKVAGSCNAVRLGSDGRLIGDMFDGEGFVRGVLRKGK 121 Query: 124 DRPLVWNKTRALVVGTGGVGCAIVASLAAQGVAEISVFDTNRAGAEALLARTAAAFPATR 183 AL+ G GGVG AI ASLA GV +++FD N A ALL R +P + Sbjct: 122 K----VEGAHALIAGAGGVGSAIAASLAQAGVEHLAIFDANETTATALLDRLKKFYPQLQ 177 Query: 184 VGFAQPDASGFDLLVNCTPLGMHVGDPMPFALEGVRRDAIVADCGMKIEMSQLLVQAQAL 243 V D GFD++VN TPLGM GDP+P ++ + V + M E++ L +A Sbjct: 178 VTVGSADPDGFDIVVNATPLGMRRGDPLPIDIDRISPSTFVGEVVMTKEITPFLEAVRAR 237 Query: 244 GCRIQKGKEMLIEQAPLYLDLFGWPGVAADDFRALEAL 281 GC Q G +ML EQ P YL+ F +P AD+ RA+ L Sbjct: 238 GCAFQVGTDMLFEQIPAYLEFFEFPTTTADNLRAIAKL 275 >B6A3Y2.1 B6A3Y2_RHILW Shikimate dehydrogenase substrate binding domain protein Length = 276 Score = 228 bits (581), Expect = 7e-58, Method: Compositional matrix adjust. Identities = 112/278 (40%), Positives = 165/278 (59%), Gaps = 4/278 (1%) Query: 4 ITGTTRIFPVIGWPVEQVKAPTLFNAYFEHHGIDARVIPFKIEPERYCEAVRMFMKTENV 63 ITGTT++ +G+P E KAP ++N YFE +GIDA V+P E Y +++ + N+ Sbjct: 2 ITGTTKLIAHLGYPTESFKAPLIYNPYFEKNGIDAVVVPMGCRREDYPAFLKLVFRLSNI 61 Query: 64 GGIFVSIPHKPMTLEAVEQSTLRARVAGACNAVYRDADGVIWGDLIDGEGFIRALARTAA 123 G +++PHK T+ +++++ A+VAG+CNAV D +G + GD+ DGEGF+R + R Sbjct: 62 HGALITMPHKIATMALLDEASTNAKVAGSCNAVRLDPNGRLIGDMFDGEGFVRGVLRKGK 121 Query: 124 DRPLVWNKTRALVVGTGGVGCAIVASLAAQGVAEISVFDTNRAGAEALLARTAAAFPATR 183 ALVVG GGVG AI ASLA GVA++++ D N+ + ALL R +P Sbjct: 122 K----VEGANALVVGAGGVGSAIAASLAKAGVAQLAIVDANKTTSAALLDRLKTYYPHLH 177 Query: 184 VGFAQPDASGFDLLVNCTPLGMHVGDPMPFALEGVRRDAIVADCGMKIEMSQLLVQAQAL 243 V D +GFD++VN TPLGM GDP+P ++ + V + + E++ L A+A Sbjct: 178 VTIGSLDPTGFDIVVNATPLGMRRGDPLPIDVDRISPSTFVGEVVLSKEITPFLEAARAR 237 Query: 244 GCRIQKGKEMLIEQAPLYLDLFGWPGVAADDFRALEAL 281 GC Q G +ML EQ P YL+ F +P AD+ RA+ L Sbjct: 238 GCTFQVGTDMLFEQIPAYLEFFEFPTTTADNLRAIAKL 275 >A8HX22.1 A8HX22_AZOC5 Shikimate dehydrogenase family protein Length = 276 Score = 221 bits (564), Expect = 8e-56, Method: Compositional matrix adjust. Identities = 118/278 (42%), Positives = 158/278 (56%), Gaps = 4/278 (1%) Query: 4 ITGTTRIFPVIGWPVEQVKAPTLFNAYFEHHGIDARVIPFKIEPERYCEAVRMFMKTENV 63 I+GTT++ IG+P E K+P ++N YFE GIDA V+P E Y +++F + N Sbjct: 2 ISGTTKLIGHIGFPTESFKSPMIYNPYFEREGIDAVVVPMGCEVPDYPSFLKLFFRLSNA 61 Query: 64 GGIFVSIPHKPMTLEAVEQSTLRARVAGACNAVYRDADGVIWGDLIDGEGFIRALARTAA 123 G +++PHK TL V+ ++ A +AGACNAV R DG + GDL DGEGF+R + R Sbjct: 62 LGTLITMPHKVTTLSLVDAASPTAAIAGACNAVRRREDGRLEGDLFDGEGFVRGMRRKGR 121 Query: 124 DRPLVWNKTRALVVGTGGVGCAIVASLAAQGVAEISVFDTNRAGAEALLARTAAAFPATR 183 V T ALVVG GGVG AI ASLA GVA I++FD++ A L R +PA Sbjct: 122 ----VIEGTHALVVGAGGVGSAIAASLARAGVARITLFDSHPEAARQLAERLKRHYPALE 177 Query: 184 VGFAQPDASGFDLLVNCTPLGMHVGDPMPFALEGVRRDAIVADCGMKIEMSQLLVQAQAL 243 V D +G D++VN TPLGM GDP+P +E + A V + M E++ L +A Sbjct: 178 VEVGANDPAGCDIVVNATPLGMRAGDPLPVEVERIAPSAFVGEVVMTHEITPFLAAVRAR 237 Query: 244 GCRIQKGKEMLIEQAPLYLDLFGWPGVAADDFRALEAL 281 GC Q G +ML EQ P Y + FG P + RA L Sbjct: 238 GCAFQVGTDMLFEQIPAYFEFFGLPPTTPEALRAAAQL 275 >C8XHT6.1 C8XHT6_NAKMY Shikimate dehydrogenase substrate binding domain protein Length = 277 Score = 216 bits (551), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 119/273 (43%), Positives = 157/273 (57%), Gaps = 4/273 (1%) Query: 4 ITGTTRIFPVIGWPVEQVKAPTLFNAYFEHHGIDARVIPFKIEPERYCEAVRMFMKTENV 63 I+G T + +G+P KAP ++N +F+ + IDA V+P ++PE Y E + K N+ Sbjct: 2 ISGKTTLIAHLGYPTFAFKAPLIYNPWFDKNDIDAVVVPMGVKPEEYREFFPLLFKMSNI 61 Query: 64 GGIFVSIPHKPMTLEAVEQSTLRARVAGACNAVYRDADGVIWGDLIDGEGFIRALARTAA 123 G V++PHK T E V++ T A+VAGA NAV DG + GD DG GF R +AR Sbjct: 62 RGALVTMPHKVTTTELVDELTPIAQVAGAANAVLLREDGSLLGDQFDGAGFARGVARKGF 121 Query: 124 DRPLVWNKTRALVVGTGGVGCAIVASLAAQGVAEISVFDTNRAGAEALLARTAAAFPATR 183 D V K RALVVG GGVG I ASL A G+AEI ++D N +EAL R +PA + Sbjct: 122 D---VTGK-RALVVGNGGVGSPIAASLVADGLAEIGLYDPNIKASEALAERLNQHYPAVK 177 Query: 184 VGFAQPDASGFDLLVNCTPLGMHVGDPMPFALEGVRRDAIVADCGMKIEMSQLLVQAQAL 243 V D GFDL+ N TPLGM GDP+P ++ + VAD MK ++ L A Sbjct: 178 VTIGSKDPDGFDLVANATPLGMQDGDPLPVDVDRIAPGTFVADVVMKQTITPFLQAALDK 237 Query: 244 GCRIQKGKEMLIEQAPLYLDLFGWPGVAADDFR 276 GC IQ G +ML EQ P YL+ FG+ AD+ R Sbjct: 238 GCPIQIGTDMLYEQIPAYLEFFGFGTTTADELR 270 >E6UWV4.1 E6UWV4_VARPD Shikimate dehydrogenase substrate binding domain protein Length = 277 Score = 207 bits (528), Expect = 1e-51, Method: Compositional matrix adjust. Identities = 114/278 (41%), Positives = 166/278 (59%), Gaps = 4/278 (1%) Query: 4 ITGTTRIFPVIGWPVEQVKAPTLFNAYFEHHGIDARVIPFKIEPERYCEAVRMFMKTENV 63 I+G T + +G+P E KAP ++N +F+ GIDA V+P ++PE Y + + N+ Sbjct: 2 ISGKTTLIAHLGYPTEAFKAPMIYNPWFDKQGIDAVVVPMGVKPEDYAATLPQVFRFSNL 61 Query: 64 GGIFVSIPHKPMTLEAVEQSTLRARVAGACNAVYRDADGVIWGDLIDGEGFIRALARTAA 123 G V++PHK T+ V++ T AR+AGACNA+ + DG + GD DG GF+R + R Sbjct: 62 RGALVTMPHKVTTMGLVDEVTPTARIAGACNAILKRPDGTLLGDQFDGAGFVRGVERKGR 121 Query: 124 DRPLVWNKTRALVVGTGGVGCAIVASLAAQGVAEISVFDTNRAGAEALLARTAAAFPATR 183 ++ TR LV GTGGVG AI AS+AA G AE+ +FD + A AEAL AR +P + Sbjct: 122 ----LFKGTRVLVSGTGGVGSAIAASIAAAGAAELMLFDMSDASAEALAARLREHYPRMK 177 Query: 184 VGFAQPDASGFDLLVNCTPLGMHVGDPMPFALEGVRRDAIVADCGMKIEMSQLLVQAQAL 243 V D +G+D++VN TPLGM DP+PF ++ + V + MK E + LL A+A Sbjct: 178 VATGSKDPAGYDVVVNATPLGMKDSDPLPFDVDRIDPKTFVGEVVMKTEYTPLLQAAKAK 237 Query: 244 GCRIQKGKEMLIEQAPLYLDLFGWPGVAADDFRALEAL 281 GC +Q G +ML E P YL+ FG+ + ++ RA+ L Sbjct: 238 GCAVQVGTDMLFEMIPAYLEFFGFGTASPEELRAVAQL 275 >B9Z063.1 B9Z063_9NEIS Shikimate dehydrogenase substrate binding domain protein Length = 292 Score = 205 bits (521), Expect = 7e-51, Method: Compositional matrix adjust. Identities = 125/269 (46%), Positives = 164/269 (60%), Gaps = 4/269 (1%) Query: 4 ITGTTRIFPVIGWPVEQVKAPTLFNAYFEHHGIDARVIPFKIEPERYCEAVRMFMKTENV 63 ITG+TR++ VI P++QV+AP LFN F +GIDA V+P ++PE + +R K NV Sbjct: 3 ITGSTRVYFVIADPIDQVRAPELFNLVFRLYGIDAVVVPLNVKPEDFDATLRALFKAPNV 62 Query: 64 GGIFVSIPHKPMTLEAVEQSTLRARVAGACNAVYRDADGVIWGDLIDGEGFIRALARTAA 123 G+F+SIPHKP L ++ +L A+VAGA NAV R DG + GDL DG GF++AL R Sbjct: 63 DGVFLSIPHKPAALTVADRCSLLAQVAGAVNAVRRAPDGALEGDLFDGLGFVKALERAH- 121 Query: 124 DRPLVWNKTRALVVGTGGVGCAIVASLAAQGVAEISVFDTNRAGAEALLARTAAAFPATR 183 + + R L++G GG AI A+LAA G AEI+VFD A L AR A AFP Sbjct: 122 ---IPYAGKRVLLIGAGGAASAIAAALAACGSAEIAVFDPAGDKAAQLAARIAEAFPVET 178 Query: 184 VGFAQPDASGFDLLVNCTPLGMHVGDPMPFALEGVRRDAIVADCGMKIEMSQLLVQAQAL 243 A D +G+DL+VN +PLGM GDP PF + + A V D MK + + LL A+A Sbjct: 179 RAAASNDPAGYDLVVNASPLGMKQGDPAPFDVARLDAGAAVFDVLMKNQPTPLLRSARAR 238 Query: 244 GCRIQKGKEMLIEQAPLYLDLFGWPGVAA 272 + + G EMLI+QAPLYL FG AA Sbjct: 239 ALKAEPGFEMLIQQAPLYLRFFGLETAAA 267 >Q46R57.1 Q46R57_CUPPJ Shikimate dehydrogenase EC=1.1.1.25 Length = 277 Score = 202 bits (514), Expect = 4e-50, Method: Compositional matrix adjust. Identities = 117/278 (42%), Positives = 163/278 (58%), Gaps = 4/278 (1%) Query: 4 ITGTTRIFPVIGWPVEQVKAPTLFNAYFEHHGIDARVIPFKIEPERYCEAVRMFMKTENV 63 I G T + +G+P E KAP ++N +FE GIDA V+P ++P+ Y R + N+ Sbjct: 2 INGKTTLIAHLGFPTESFKAPMIYNPWFEQQGIDAVVVPMGVKPDDYPVFFRSLFRLSNI 61 Query: 64 GGIFVSIPHKPMTLEAVEQSTLRARVAGACNAVYRDADGVIWGDLIDGEGFIRALARTAA 123 G V++PHK T+E V++ T AR+AGACNAV DG + GD DG GF+R + R Sbjct: 62 RGALVTMPHKVATVELVDELTPTARIAGACNAVLLRDDGKLVGDQFDGAGFVRGIQRKGC 121 Query: 124 DRPLVWNKTRALVVGTGGVGCAIVASLAAQGVAEISVFDTNRAGAEALLARTAAAFPATR 183 RA+V G+GGVG AI ASLAA VAE+++FDT A + AL R A +PA R Sbjct: 122 R----LEGARAMVSGSGGVGSAIAASLAAASVAELALFDTREASSLALRDRLLAHYPALR 177 Query: 184 VGFAQPDASGFDLLVNCTPLGMHVGDPMPFALEGVRRDAIVADCGMKIEMSQLLVQAQAL 243 V D +G+D++VN TPLGM+ GD +PF + + A+V + MK E + L A A Sbjct: 178 VTTGSADPAGYDVVVNATPLGMNPGDALPFDVTRIDAGAMVGEVVMKSEYTPFLEAAIAR 237 Query: 244 GCRIQKGKEMLIEQAPLYLDLFGWPGVAADDFRALEAL 281 GC++Q G +ML E P YL+ FG+ + RA+ L Sbjct: 238 GCKVQVGTDMLFEMIPAYLEFFGFGTATPEALRAVARL 275