BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0036.0001.p (351 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value D8IRT9.1 D8IRT9_HERSS Tfp pilus assembly protein, pilus retracti... 677 0.0 C0EPI6.1 C0EPI6_NEIFL Putative uncharacterized protein 384 e-104 D2ZZY0.1 D2ZZY0_NEIMU 4-diphosphocytidyl-2C-methyl-D-erythritol ... 382 e-104 C5TIL8.1 C5TIL8_NEIFL Type II/IV secretion system protein 381 e-104 Q3SG78.1 Q3SG78_THIDA Pilus retraction protein PilT 381 e-104 D3A2S3.1 D3A2S3_NEISU 4-diphosphocytidyl-2C-methyl-D-erythritol ... 381 e-104 Q21RM6.1 Q21RM6_RHOFD Pilus retraction ATPase PilT 381 e-103 Q478X0.1 Q478X0_DECAR Pilus retraction ATPase PilT 380 e-103 D5CPI9.1 D5CPI9_SIDLE Twitching motility protein 380 e-103 E5UK48.1 E5UK48_NEIMU Twitching motility protein 380 e-103 >D8IRT9.1 D8IRT9_HERSS Tfp pilus assembly protein, pilus retraction ATPase PilT protein Length = 351 Score = 677 bits (1747), Expect = 0.0, Method: Compositional matrix adjust. Identities = 349/351 (99%), Positives = 349/351 (99%) Query: 1 MDIAVLLAFAVRNQASDLHLCAGMPPLLRVHGALRRVNLQAPTGPQLQQWLQALMPAALH 60 MDIAVLLAFAVRNQASDLHLCAGMPPLLRVHGALRRVNLQAPTGPQLQQWLQALMPAALH Sbjct: 1 MDIAVLLAFAVRNQASDLHLCAGMPPLLRVHGALRRVNLQAPTGPQLQQWLQALMPAALH 60 Query: 61 PRYAQGRECDFAIELAALGRFRVHAFLRQGGPAAAIRHLGREPPTLAQLGAPPLCAELAE 120 PRYAQGRECDFAIELAALGRFRVHAFLRQGGPA AIRHLGREPPTLAQLGAPPLCAELAE Sbjct: 61 PRYAQGRECDFAIELAALGRFRVHAFLRQGGPAVAIRHLGREPPTLAQLGAPPLCAELAE 120 Query: 121 RAGGLVLVTGPTGAGKSSTLAAMIRHLNETRALHILTIEDPIEFIHTPQRALISQRELGT 180 RAGGLVLVTGPTGAGKSSTLAAMIRHLNETRALHILTIEDPIEFIHTPQRALISQRELGT Sbjct: 121 RAGGLVLVTGPTGAGKSSTLAAMIRHLNETRALHILTIEDPIEFIHTPQRALISQRELGT 180 Query: 181 HTTDLPAALRAALRADPDVLLVGELRDADTIRLALTAAETGHLVLGTLHAASAARTVERM 240 HT DLPAALRAALRADPDVLLVGELRDADTIRLALTAAETGHLVLGTLHAASAARTVERM Sbjct: 181 HTADLPAALRAALRADPDVLLVGELRDADTIRLALTAAETGHLVLGTLHAASAARTVERM 240 Query: 241 LDVFPAGEKEPARAMLAESLQGVIAQTLLPTADGRARVAAHELLVATPAVRNLIREGRSA 300 LDVFPAGEKEPARAMLAESLQGVIAQTLLPTADGRARVAAHELLVATPAVRNLIREGRSA Sbjct: 241 LDVFPAGEKEPARAMLAESLQGVIAQTLLPTADGRARVAAHELLVATPAVRNLIREGRSA 300 Query: 301 QLLSLMQAGAAQGMQTLEAALQRLHQQGRISAQTLRQHLGQEPQAGPGMAV 351 QLLSLMQAGAAQGMQTLEAALQRLHQQGRISAQTLRQHLGQEPQAGPGMAV Sbjct: 301 QLLSLMQAGAAQGMQTLEAALQRLHQQGRISAQTLRQHLGQEPQAGPGMAV 351 >C0EPI6.1 C0EPI6_NEIFL Putative uncharacterized protein Length = 348 Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust. Identities = 192/336 (57%), Positives = 246/336 (73%) Query: 1 MDIAVLLAFAVRNQASDLHLCAGMPPLLRVHGALRRVNLQAPTGPQLQQWLQALMPAALH 60 M I LLAF V+N+ASDLHL AGM P++RVHG +RR+NL + ++ + ++M Sbjct: 1 MQITDLLAFGVKNKASDLHLSAGMSPMIRVHGDIRRINLPEMSSEEVGTMITSVMNDHQR 60 Query: 61 PRYAQGRECDFAIELAALGRFRVHAFLRQGGPAAAIRHLGREPPTLAQLGAPPLCAELAE 120 Y Q E DF+ EL + RFRV+AF+ + GPAA R + TL +L AP + ++AE Sbjct: 61 KIYQQDFEVDFSFELPNVARFRVNAFMTERGPAAVFRTIPSTVLTLEELHAPRIFQKIAE 120 Query: 121 RAGGLVLVTGPTGAGKSSTLAAMIRHLNETRALHILTIEDPIEFIHTPQRALISQRELGT 180 GLVLVTGPTG+GKS+TLAAM+ ++NET+ HILTIEDPIEF+H ++AL++QREL Sbjct: 121 NPRGLVLVTGPTGSGKSTTLAAMVNYINETQPAHILTIEDPIEFVHQSKKALVNQRELHQ 180 Query: 181 HTTDLPAALRAALRADPDVLLVGELRDADTIRLALTAAETGHLVLGTLHAASAARTVERM 240 HT ALR+ALR DPDV+LVGE+RD +TI LALTAAETGHLV GTLH AA+TV+R+ Sbjct: 181 HTHSFANALRSALREDPDVILVGEMRDPETIGLALTAAETGHLVFGTLHTTGAAKTVDRI 240 Query: 241 LDVFPAGEKEPARAMLAESLQGVIAQTLLPTADGRARVAAHELLVATPAVRNLIREGRSA 300 +DVFPAGEKE R+ML+ESL+ VI+QTLL T DG RVAAHE+L++TPAVRNLIRE + A Sbjct: 241 VDVFPAGEKEMVRSMLSESLRAVISQTLLKTHDGNGRVAAHEILISTPAVRNLIRENKIA 300 Query: 301 QLLSLMQAGAAQGMQTLEAALQRLHQQGRISAQTLR 336 Q+ S +Q G + GMQTL+ ALQ L +QG IS R Sbjct: 301 QINSALQTGQSHGMQTLDQALQALVRQGTISPDVAR 336 >D2ZZY0.1 D2ZZY0_NEIMU 4-diphosphocytidyl-2C-methyl-D-erythritol kinase Length = 348 Score = 382 bits (980), Expect = e-104, Method: Compositional matrix adjust. Identities = 192/336 (57%), Positives = 244/336 (72%) Query: 1 MDIAVLLAFAVRNQASDLHLCAGMPPLLRVHGALRRVNLQAPTGPQLQQWLQALMPAALH 60 M I LLAF V+N+ASDLHL AGM P++RVHG +RR+NL + ++ + ++M Sbjct: 1 MQITDLLAFGVKNKASDLHLSAGMSPMIRVHGDIRRINLPEMSAEEVGNMVTSVMNDHQR 60 Query: 61 PRYAQGRECDFAIELAALGRFRVHAFLRQGGPAAAIRHLGREPPTLAQLGAPPLCAELAE 120 + Q E DF+ EL + RFRV+AF GPAA R + + TL L AP + ++A+ Sbjct: 61 KLFQQDLEVDFSFELPNVARFRVNAFTSNRGPAAVFRTIPSDVLTLEDLRAPRIFQKIAD 120 Query: 121 RAGGLVLVTGPTGAGKSSTLAAMIRHLNETRALHILTIEDPIEFIHTPQRALISQRELGT 180 GLVLVTGPTG+GKS+TLAAMI ++NET+ HILTIEDPIEF+H ++AL++QREL Sbjct: 121 NPRGLVLVTGPTGSGKSTTLAAMINYINETQPAHILTIEDPIEFVHQSKKALVNQRELHQ 180 Query: 181 HTTDLPAALRAALRADPDVLLVGELRDADTIRLALTAAETGHLVLGTLHAASAARTVERM 240 HT ALR+ALR DPDV+LVGE+RD +TI LALTAAETGHLV GTLH AA+TV+R+ Sbjct: 181 HTHSFANALRSALREDPDVILVGEMRDPETIGLALTAAETGHLVFGTLHTTGAAKTVDRI 240 Query: 241 LDVFPAGEKEPARAMLAESLQGVIAQTLLPTADGRARVAAHELLVATPAVRNLIREGRSA 300 +DVFPAGEKE R+ML+ESL+ VI+QTLL T DG RVAAHE+L++TPAVRNLIRE + A Sbjct: 241 VDVFPAGEKEMVRSMLSESLRAVISQTLLKTRDGNGRVAAHEILISTPAVRNLIRENKIA 300 Query: 301 QLLSLMQAGAAQGMQTLEAALQRLHQQGRISAQTLR 336 Q+ S +Q G A GMQTL+ ALQ L +QG IS R Sbjct: 301 QINSALQTGQAHGMQTLDQALQTLVRQGTISPDVAR 336 >C5TIL8.1 C5TIL8_NEIFL Type II/IV secretion system protein Length = 348 Score = 381 bits (979), Expect = e-104, Method: Compositional matrix adjust. Identities = 188/336 (55%), Positives = 247/336 (73%) Query: 1 MDIAVLLAFAVRNQASDLHLCAGMPPLLRVHGALRRVNLQAPTGPQLQQWLQALMPAALH 60 M I LLAF V+N+ASDLHL +G+ P++RVHG +RR+NL + ++ + ++M Sbjct: 1 MQITDLLAFGVKNKASDLHLSSGISPMIRVHGDIRRINLPEMSSEEVGTMITSVMNDHQR 60 Query: 61 PRYAQGRECDFAIELAALGRFRVHAFLRQGGPAAAIRHLGREPPTLAQLGAPPLCAELAE 120 Y Q E DF+ EL + RFRV+AF+ + GPAA R + TL +L AP + ++AE Sbjct: 61 KLYQQDFEVDFSFELPNVARFRVNAFMTERGPAAVFRTIPGTVLTLEELRAPRIFQKIAE 120 Query: 121 RAGGLVLVTGPTGAGKSSTLAAMIRHLNETRALHILTIEDPIEFIHTPQRALISQRELGT 180 GLVLVTGPTG+GKS+TLAAM+ ++NET+ HILTIEDPIEF+H ++ALI+QREL Sbjct: 121 NPRGLVLVTGPTGSGKSTTLAAMVNYINETQPAHILTIEDPIEFVHQSKKALINQRELHQ 180 Query: 181 HTTDLPAALRAALRADPDVLLVGELRDADTIRLALTAAETGHLVLGTLHAASAARTVERM 240 HT ALR+ALR DPDV+L+GE+RD +TI LALTAAETGHLV GTLH AA+T++R+ Sbjct: 181 HTNSFTNALRSALREDPDVILIGEMRDPETISLALTAAETGHLVFGTLHTTGAAKTIDRI 240 Query: 241 LDVFPAGEKEPARAMLAESLQGVIAQTLLPTADGRARVAAHELLVATPAVRNLIREGRSA 300 +DVFPAGEKE R+ML+ESL+ +I+QTLL T DG RVAAHE+L++TPAVRNLIRE + A Sbjct: 241 VDVFPAGEKEIVRSMLSESLRAIISQTLLKTRDGNGRVAAHEILISTPAVRNLIRENKIA 300 Query: 301 QLLSLMQAGAAQGMQTLEAALQRLHQQGRISAQTLR 336 Q+ + +Q G A GMQTL+ ALQ L +QG IS + R Sbjct: 301 QINAALQTGQAHGMQTLDQALQTLVRQGTISPELAR 336 >Q3SG78.1 Q3SG78_THIDA Pilus retraction protein PilT Length = 347 Score = 381 bits (979), Expect = e-104, Method: Compositional matrix adjust. Identities = 183/336 (54%), Positives = 248/336 (73%) Query: 1 MDIAVLLAFAVRNQASDLHLCAGMPPLLRVHGALRRVNLQAPTGPQLQQWLQALMPAALH 60 MDI+ LLAFAV+N+ASDLHL +G+PP++RV+G +RR+NL + + + +M + Sbjct: 1 MDISELLAFAVKNKASDLHLSSGLPPMIRVNGDIRRINLPPMEHKDVHRMVYDIMNDSQR 60 Query: 61 PRYAQGRECDFAIELAALGRFRVHAFLRQGGPAAAIRHLGREPPTLAQLGAPPLCAELAE 120 Y + E DF+ E+ +L RFRV+AF +Q G A R + + TL +L PP+ E+A+ Sbjct: 61 KVYEETLEIDFSFEIPSLARFRVNAFNQQYGAGAVFRTIPSKVLTLEELNCPPIFKEIAD 120 Query: 121 RAGGLVLVTGPTGAGKSSTLAAMIRHLNETRALHILTIEDPIEFIHTPQRALISQRELGT 180 + G+VLVTGPTG+GKS+TLAAM+ ++NE + HILT+EDPIEF+H ++ LI+QRE+G Sbjct: 121 QPRGIVLVTGPTGSGKSTTLAAMMDYVNENQYSHILTVEDPIEFVHQSKKCLINQREVGP 180 Query: 181 HTTDLPAALRAALRADPDVLLVGELRDADTIRLALTAAETGHLVLGTLHAASAARTVERM 240 HT ALR+ALR DPDV+LVGELRD +TIRLALTAAETGHLV GTLH +SAA+T++R+ Sbjct: 181 HTLSFNNALRSALREDPDVILVGELRDLETIRLALTAAETGHLVFGTLHTSSAAKTIDRV 240 Query: 241 LDVFPAGEKEPARAMLAESLQGVIAQTLLPTADGRARVAAHELLVATPAVRNLIREGRSA 300 +DVFPA EKE R+ML+ESL+ VI+QTLL T DG RVAAHE++V TPA+RNLIRE + A Sbjct: 241 VDVFPAAEKEMVRSMLSESLRAVISQTLLKTKDGTGRVAAHEIMVGTPAIRNLIRENKVA 300 Query: 301 QLLSLMQAGAAQGMQTLEAALQRLHQQGRISAQTLR 336 Q+ S +Q G GMQTL+ LQ L ++ I++ R Sbjct: 301 QMYSAIQTGGNLGMQTLDQNLQDLVRRNVIASNVAR 336 >D3A2S3.1 D3A2S3_NEISU 4-diphosphocytidyl-2C-methyl-D-erythritol kinase Length = 348 Score = 381 bits (979), Expect = e-104, Method: Compositional matrix adjust. Identities = 188/336 (55%), Positives = 247/336 (73%) Query: 1 MDIAVLLAFAVRNQASDLHLCAGMPPLLRVHGALRRVNLQAPTGPQLQQWLQALMPAALH 60 M I LLAF V+N+ASDLHL +G+ P++RVHG +RR+NL + ++ + ++M Sbjct: 1 MQITDLLAFGVKNKASDLHLSSGISPMIRVHGDIRRINLPEMSSEEVGTMITSVMNDHQR 60 Query: 61 PRYAQGRECDFAIELAALGRFRVHAFLRQGGPAAAIRHLGREPPTLAQLGAPPLCAELAE 120 Y Q E DF+ EL + RFRV+AF+ + GPAA R + TL +L AP + ++AE Sbjct: 61 KLYQQDFEVDFSFELPNVARFRVNAFMTERGPAAVFRTIPSTVLTLEELRAPRIFQKIAE 120 Query: 121 RAGGLVLVTGPTGAGKSSTLAAMIRHLNETRALHILTIEDPIEFIHTPQRALISQRELGT 180 GLVLVTGPTG+GKS+TLAAM+ ++NET+ HILTIEDPIEF+H ++ALI+QREL Sbjct: 121 NPRGLVLVTGPTGSGKSTTLAAMVNYINETQPAHILTIEDPIEFVHQSKKALINQRELHQ 180 Query: 181 HTTDLPAALRAALRADPDVLLVGELRDADTIRLALTAAETGHLVLGTLHAASAARTVERM 240 HT ALR+ALR DPDV+L+GE+RD +TI LALTAAETGHLV GTLH AA+T++R+ Sbjct: 181 HTHSFTNALRSALREDPDVILIGEMRDPETISLALTAAETGHLVFGTLHTTGAAKTIDRI 240 Query: 241 LDVFPAGEKEPARAMLAESLQGVIAQTLLPTADGRARVAAHELLVATPAVRNLIREGRSA 300 +DVFPAGEKE R+ML+ESL+ +I+QTLL T DG RVAAHE+L++TPAVRNLIRE + A Sbjct: 241 VDVFPAGEKEIVRSMLSESLRAIISQTLLKTRDGNGRVAAHEILISTPAVRNLIRENKIA 300 Query: 301 QLLSLMQAGAAQGMQTLEAALQRLHQQGRISAQTLR 336 Q+ + +Q G A GMQTL+ ALQ L +QG IS + R Sbjct: 301 QINAALQTGQAHGMQTLDQALQTLVRQGTISPELAR 336 >Q21RM6.1 Q21RM6_RHOFD Pilus retraction ATPase PilT Length = 347 Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust. Identities = 187/348 (53%), Positives = 251/348 (72%), Gaps = 1/348 (0%) Query: 1 MDIAVLLAFAVRNQASDLHLCAGMPPLLRVHGALRRVNLQAPTGPQLQQWLQALMPAALH 60 MDI LLAF+V+N+ASDLHL +G+PP++RV+G +RR+N++A Q+ + +M + Sbjct: 1 MDITQLLAFSVKNKASDLHLSSGLPPMIRVNGDVRRINVEALDHKQVHAMVYDIMNDSQR 60 Query: 61 PRYAQGRECDFAIELAALGRFRVHAFLRQGGPAAAIRHLGREPPTLAQLGAPPLCAELAE 120 Y + E DF+ E+ L RFRV+A+ +Q G A R + + TL QL AP + A+LA Sbjct: 61 KVYEEFWEVDFSFEIEGLARFRVNAYNQQRGAGAVFRTIPSKILTLEQLNAPKIFADLAL 120 Query: 121 RAGGLVLVTGPTGAGKSSTLAAMIRHLNETRALHILTIEDPIEFIHTPQRALISQRELGT 180 + GLVLVTGPTG+GKS+TLAAM+ LNET HILT+EDPIEF+H ++ L++QRE+GT Sbjct: 121 KPRGLVLVTGPTGSGKSTTLAAMVNFLNETEFGHILTVEDPIEFVHESKKCLVNQREVGT 180 Query: 181 HTTDLPAALRAALRADPDVLLVGELRDADTIRLALTAAETGHLVLGTLHAASAARTVERM 240 HT AALR+ALR DPD +LVGE+RD +TIRLA+TAAETGHLV GTLH +SAA+T++R+ Sbjct: 181 HTLSFAAALRSALREDPDAILVGEMRDLETIRLAMTAAETGHLVFGTLHTSSAAKTIDRV 240 Query: 241 LDVFPAGEKEPARAMLAESLQGVIAQTLLPTADGRARVAAHELLVATPAVRNLIREGRSA 300 +DVFPA EKE RAML+ESLQ VI+QTL T DG+ RVAAHE+++ T A+RNLIRE + A Sbjct: 241 IDVFPAEEKEMVRAMLSESLQAVISQTLCKTKDGQGRVAAHEIMLGTSAIRNLIREAKVA 300 Query: 301 QLLSLMQAGAAQGMQTLEAALQRLHQQGRISAQTLRQHLGQEPQAGPG 348 Q+ S +Q G + GMQTL+ L L ++ IS R + P+ PG Sbjct: 301 QMYSSIQTGNSVGMQTLDQNLSDLVKRNIISPSEARSK-AKIPENFPG 347 >Q478X0.1 Q478X0_DECAR Pilus retraction ATPase PilT Length = 347 Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust. Identities = 183/336 (54%), Positives = 243/336 (72%) Query: 1 MDIAVLLAFAVRNQASDLHLCAGMPPLLRVHGALRRVNLQAPTGPQLQQWLQALMPAALH 60 MDI LLAF+V+N+ASDLHL +G+PP++RVHG +RR+NL A + + +M Sbjct: 1 MDITELLAFSVKNKASDLHLSSGLPPMIRVHGDVRRINLPAMEHKDVHGMVYDIMNDGQR 60 Query: 61 PRYAQGRECDFAIELAALGRFRVHAFLRQGGPAAAIRHLGREPPTLAQLGAPPLCAELAE 120 Y + ECDF+ E+ L RFRV+AF +Q G AA R + + TL +L P + E++E Sbjct: 61 KIYEETLECDFSFEIPNLARFRVNAFNQQRGAAAVFRTIPSKVLTLEELNCPKIFKEISE 120 Query: 121 RAGGLVLVTGPTGAGKSSTLAAMIRHLNETRALHILTIEDPIEFIHTPQRALISQRELGT 180 G+VLVTGPTG+GKS+TLAAM+ H+NE HILT+EDPIEF+H ++ LI+QRE+G Sbjct: 121 YPRGIVLVTGPTGSGKSTTLAAMVNHINENEYGHILTVEDPIEFVHESKKCLINQREVGP 180 Query: 181 HTTDLPAALRAALRADPDVLLVGELRDADTIRLALTAAETGHLVLGTLHAASAARTVERM 240 HT ALR+ALR DPDV+LVGE+RD +TIRLALTAAETGHLV GTLH +SAA+TV+R+ Sbjct: 181 HTLSFSNALRSALREDPDVILVGEMRDLETIRLALTAAETGHLVFGTLHTSSAAKTVDRV 240 Query: 241 LDVFPAGEKEPARAMLAESLQGVIAQTLLPTADGRARVAAHELLVATPAVRNLIREGRSA 300 +DVFPA EKE R+ML+ESL+ VI+QTLL T DG RVAAHE+++ TPA+RNLIRE + A Sbjct: 241 VDVFPAAEKEMVRSMLSESLRAVISQTLLKTKDGGGRVAAHEIMIGTPAIRNLIRENKIA 300 Query: 301 QLLSLMQAGAAQGMQTLEAALQRLHQQGRISAQTLR 336 Q+ S +Q G GMQTL+ L + ++ +S+ R Sbjct: 301 QMYSAIQTGQNFGMQTLDQNLIDMVRRNVVSSNEAR 336 >D5CPI9.1 D5CPI9_SIDLE Twitching motility protein Length = 347 Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust. Identities = 179/336 (53%), Positives = 244/336 (72%) Query: 1 MDIAVLLAFAVRNQASDLHLCAGMPPLLRVHGALRRVNLQAPTGPQLQQWLQALMPAALH 60 MDI LLAF V+N+ASDLHL AG+PP++RVHG +RR+NL A ++ + +M Sbjct: 1 MDITELLAFGVKNKASDLHLSAGLPPMIRVHGDMRRINLPAMEHKEVHAMVYDIMNDGQR 60 Query: 61 PRYAQGRECDFAIELAALGRFRVHAFLRQGGPAAAIRHLGREPPTLAQLGAPPLCAELAE 120 Y + +E DF+ E+ L RFRV+AF++ G A +R + + TL L PP+ +++E Sbjct: 61 KHYEENKEVDFSFEVPNLARFRVNAFIQNRGAGAVMRTIPSKILTLEDLKCPPIFKDISE 120 Query: 121 RAGGLVLVTGPTGAGKSSTLAAMIRHLNETRALHILTIEDPIEFIHTPQRALISQRELGT 180 G+VLVTGPTG+GKS+TLAAM+ H+NE HILT+EDPIEF+H +++L++QRE+G Sbjct: 121 FPRGMVLVTGPTGSGKSTTLAAMVNHINENEMGHILTVEDPIEFVHESKKSLVNQREVGP 180 Query: 181 HTTDLPAALRAALRADPDVLLVGELRDADTIRLALTAAETGHLVLGTLHAASAARTVERM 240 HT ALR+ALR DPDV+LVGE+RD +TIRLA+TAAETGHLV GTLH +SAA+T++R+ Sbjct: 181 HTLSFNNALRSALREDPDVILVGEMRDLETIRLAMTAAETGHLVFGTLHTSSAAKTIDRI 240 Query: 241 LDVFPAGEKEPARAMLAESLQGVIAQTLLPTADGRARVAAHELLVATPAVRNLIREGRSA 300 +DVFPA EKE RAML+ESL+ VI+QTLL T DG RVAAHE+++ TPA+RNLIRE + Sbjct: 241 IDVFPADEKEMVRAMLSESLRAVISQTLLKTKDGSGRVAAHEIMICTPAIRNLIREAKVP 300 Query: 301 QLLSLMQAGAAQGMQTLEAALQRLHQQGRISAQTLR 336 Q+ S +Q G GMQTL+ LQ L ++ +++ R Sbjct: 301 QMYSAIQTGGNIGMQTLDQCLQDLVKRNMVASSEAR 336 >E5UK48.1 E5UK48_NEIMU Twitching motility protein Length = 348 Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust. Identities = 188/336 (55%), Positives = 247/336 (73%) Query: 1 MDIAVLLAFAVRNQASDLHLCAGMPPLLRVHGALRRVNLQAPTGPQLQQWLQALMPAALH 60 M I LLAF V+N+ASDLHL +G+ P++RVHG +RR+NL + ++ + ++M Sbjct: 1 MQITDLLAFGVKNKASDLHLSSGISPMIRVHGDIRRINLPEMSPEEVGTMITSVMNDHQR 60 Query: 61 PRYAQGRECDFAIELAALGRFRVHAFLRQGGPAAAIRHLGREPPTLAQLGAPPLCAELAE 120 Y Q E DF+ EL + RFRV+AF+ + GPAA R + TL +L AP + ++AE Sbjct: 61 KLYQQDFEVDFSFELPNVARFRVNAFMTERGPAAVFRTIPSTVLTLEELRAPRIFQKIAE 120 Query: 121 RAGGLVLVTGPTGAGKSSTLAAMIRHLNETRALHILTIEDPIEFIHTPQRALISQRELGT 180 GLVLVTGPTG+GKS+TLAAM+ ++NET+ HILTIEDPIEF+H ++ALI+QREL Sbjct: 121 NPRGLVLVTGPTGSGKSTTLAAMVNYINETQPAHILTIEDPIEFVHQSKKALINQRELHQ 180 Query: 181 HTTDLPAALRAALRADPDVLLVGELRDADTIRLALTAAETGHLVLGTLHAASAARTVERM 240 HT ALR+ALR DPDV+L+GE+RD +TI LALTAAETGHLV GTLH AA+T++R+ Sbjct: 181 HTHSFTNALRSALREDPDVILIGEMRDPETISLALTAAETGHLVFGTLHTTGAAKTIDRI 240 Query: 241 LDVFPAGEKEPARAMLAESLQGVIAQTLLPTADGRARVAAHELLVATPAVRNLIREGRSA 300 +DVFPAGEKE R+ML+ESL+ +I+QTLL T DG RVAAHE+L++TPAVRNLIRE + A Sbjct: 241 VDVFPAGEKEIVRSMLSESLRAIISQTLLKTRDGNGRVAAHEILISTPAVRNLIRENKIA 300 Query: 301 QLLSLMQAGAAQGMQTLEAALQRLHQQGRISAQTLR 336 Q+ + +Q G A GMQTL+ ALQ L +QG IS + R Sbjct: 301 QINAALQTGQAHGMQTLDQALQTLVRQGTISPEMAR 336