BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0035.0223.p (404 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value D8J0G7.1 D8J0G7_HERSS ABC-type branched-chain amino acid transpo... 834 0.0 Q46VV7.1 Q46VV7_CUPPJ Extracellular ligand-binding receptor 629 e-178 Q1LHI6.1 Q1LHI6_RALME ABC-type transporter, periplasmic component 628 e-178 E2SXB1.1 E2SXB1_9RALS Amino acid uptake ABC transporter 627 e-177 C6BHA4.1 C6BHA4_RALP1 Extracellular ligand-binding receptor 626 e-177 B2UGX3.1 B2UGX3_RALPJ Putative substrate-binding periplasmic (PB... 625 e-177 F1W2R9.1 F1W2R9_9BURK Leucine-, isoleucine-, valine-, threonine-... 623 e-176 D8NUZ4.1 D8NUZ4_RALSO Putative branched-chain amino acid transpo... 620 e-176 Q8XU51.1 Q8XU51_RALSO Putative substrate-binding periplasmic (Pb... 619 e-175 B3R7N8.1 B3R7N8_CUPTR Putative branched-chain amino acid transpo... 618 e-175 >D8J0G7.1 D8J0G7_HERSS ABC-type branched-chain amino acid transport system, periplasmic component protein Length = 404 Score = 834 bits (2154), Expect = 0.0, Method: Compositional matrix adjust. Identities = 404/404 (100%), Positives = 404/404 (100%) Query: 1 MSTSTPLRRLAAACAIAGIFSGAALAQVSNDAVRIGFITDMSGPYADTDGLGGLEAIRMA 60 MSTSTPLRRLAAACAIAGIFSGAALAQVSNDAVRIGFITDMSGPYADTDGLGGLEAIRMA Sbjct: 1 MSTSTPLRRLAAACAIAGIFSGAALAQVSNDAVRIGFITDMSGPYADTDGLGGLEAIRMA 60 Query: 61 VADFGGTVLGKPIEVISADHQNKADIAATRAREWADERGLDMLIGGVNSATALSMNKVMA 120 VADFGGTVLGKPIEVISADHQNKADIAATRAREWADERGLDMLIGGVNSATALSMNKVMA Sbjct: 61 VADFGGTVLGKPIEVISADHQNKADIAATRAREWADERGLDMLIGGVNSATALSMNKVMA 120 Query: 121 EKKRVYINIGAGTARLTNEECTPYTVHYEYDTVALAKGTASAVIKQGGKSWFFLVADYAF 180 EKKRVYINIGAGTARLTNEECTPYTVHYEYDTVALAKGTASAVIKQGGKSWFFLVADYAF Sbjct: 121 EKKRVYINIGAGTARLTNEECTPYTVHYEYDTVALAKGTASAVIKQGGKSWFFLVADYAF 180 Query: 181 GHSLANDTSAVVKASGGTVVGSIKHPPQSSDLSSFLLQAQASKAQILGLANAGEDTVNSI 240 GHSLANDTSAVVKASGGTVVGSIKHPPQSSDLSSFLLQAQASKAQILGLANAGEDTVNSI Sbjct: 181 GHSLANDTSAVVKASGGTVVGSIKHPPQSSDLSSFLLQAQASKAQILGLANAGEDTVNSI 240 Query: 241 KAAKEFGVTKTMKLVGLLMVINDIHALGLANAEGLMMTDSWYWDKDEPSRKFAERFFQKM 300 KAAKEFGVTKTMKLVGLLMVINDIHALGLANAEGLMMTDSWYWDKDEPSRKFAERFFQKM Sbjct: 241 KAAKEFGVTKTMKLVGLLMVINDIHALGLANAEGLMMTDSWYWDKDEPSRKFAERFFQKM 300 Query: 301 KKMPSTHQAAAYSATTTYLKAVQAIGTDDSTKVMAQLKKTRIDDFYNKGSIRADGRNIHD 360 KKMPSTHQAAAYSATTTYLKAVQAIGTDDSTKVMAQLKKTRIDDFYNKGSIRADGRNIHD Sbjct: 301 KKMPSTHQAAAYSATTTYLKAVQAIGTDDSTKVMAQLKKTRIDDFYNKGSIRADGRNIHD 360 Query: 361 MYLYQVKSPAESKKPWDYLKLLETIPGEQAFTSVADSKCSLLKQ 404 MYLYQVKSPAESKKPWDYLKLLETIPGEQAFTSVADSKCSLLKQ Sbjct: 361 MYLYQVKSPAESKKPWDYLKLLETIPGEQAFTSVADSKCSLLKQ 404 >Q46VV7.1 Q46VV7_CUPPJ Extracellular ligand-binding receptor Length = 402 Score = 629 bits (1623), Expect = e-178, Method: Compositional matrix adjust. Identities = 300/398 (75%), Positives = 346/398 (86%), Gaps = 2/398 (0%) Query: 9 RLAAACA--IAGIFSGAALAQVSNDAVRIGFITDMSGPYADTDGLGGLEAIRMAVADFGG 66 RLAAA A + G S A AQVS D V+IGFITD+SG YAD DG GG+EAI+MA+ D GG Sbjct: 5 RLAAAMAAIVMGAVSFNAAAQVSGDTVKIGFITDLSGLYADIDGQGGVEAIKMAIEDAGG 64 Query: 67 TVLGKPIEVISADHQNKADIAATRAREWADERGLDMLIGGVNSATALSMNKVMAEKKRVY 126 VLGKPIE+++ADHQNKADIAA++AREW D++GLD+LIGG NS TAL+MNKV AEKKRVY Sbjct: 65 KVLGKPIELVTADHQNKADIAASKAREWMDQQGLDVLIGGTNSGTALAMNKVAAEKKRVY 124 Query: 127 INIGAGTARLTNEECTPYTVHYEYDTVALAKGTASAVIKQGGKSWFFLVADYAFGHSLAN 186 IN GAGTARLTNEEC+PYTVHY YDTVALAKGT SAV+KQGGKSWFFL ADYAFGHSL + Sbjct: 125 INNGAGTARLTNEECSPYTVHYAYDTVALAKGTGSAVVKQGGKSWFFLTADYAFGHSLES 184 Query: 187 DTSAVVKASGGTVVGSIKHPPQSSDLSSFLLQAQASKAQILGLANAGEDTVNSIKAAKEF 246 DT+AVVKA+GGTV+GS++HP +SD SSFLLQAQASKAQILGLANAG DT+NSIKAAKEF Sbjct: 185 DTAAVVKANGGTVLGSVRHPLSASDFSSFLLQAQASKAQILGLANAGGDTINSIKAAKEF 244 Query: 247 GVTKTMKLVGLLMVINDIHALGLANAEGLMMTDSWYWDKDEPSRKFAERFFQKMKKMPST 306 G+TKTMK+ GLLM INDIH+LGL N EGL+MTDSWYWD ++ +RKFA R+F KMKKMPS+ Sbjct: 245 GITKTMKIAGLLMFINDIHSLGLKNTEGLLMTDSWYWDMNDDTRKFANRYFSKMKKMPSS 304 Query: 307 HQAAAYSATTTYLKAVQAIGTDDSTKVMAQLKKTRIDDFYNKGSIRADGRNIHDMYLYQV 366 QAA YSA +TYLKAV A TDD KVMA+LKKT+I+DFY KG IR DGR IHDMYL QV Sbjct: 305 LQAADYSAVSTYLKAVAAAKTDDPDKVMAELKKTKINDFYTKGYIRQDGRGIHDMYLMQV 364 Query: 367 KSPAESKKPWDYLKLLETIPGEQAFTSVADSKCSLLKQ 404 KSPAESKKPWDYLK++ TIPG+QAFT+VA+SKCS++K+ Sbjct: 365 KSPAESKKPWDYLKIVATIPGDQAFTTVAESKCSMMKK 402 >Q1LHI6.1 Q1LHI6_RALME ABC-type transporter, periplasmic component Length = 402 Score = 628 bits (1620), Expect = e-178, Method: Compositional matrix adjust. Identities = 296/400 (74%), Positives = 344/400 (86%), Gaps = 2/400 (0%) Query: 7 LRRLAAACA--IAGIFSGAALAQVSNDAVRIGFITDMSGPYADTDGLGGLEAIRMAVADF 64 + RLA A A + G F+G A AQVS D V+IG+ITDMSG YAD DG GGLEA++MA+ D Sbjct: 3 MTRLAVAVAATVLGAFAGGASAQVSGDTVKIGYITDMSGLYADIDGPGGLEAVKMAIEDH 62 Query: 65 GGTVLGKPIEVISADHQNKADIAATRAREWADERGLDMLIGGVNSATALSMNKVMAEKKR 124 GG VLGKPIE++SADHQNKADIAA++AREW D++GLDML+GG NSAT L+MNKV EKKR Sbjct: 63 GGKVLGKPIELVSADHQNKADIAASKAREWMDQQGLDMLLGGTNSATGLAMNKVAQEKKR 122 Query: 125 VYINIGAGTARLTNEECTPYTVHYEYDTVALAKGTASAVIKQGGKSWFFLVADYAFGHSL 184 VY N+GAGTARLTNEEC+PYTVHY YDTVALAKGT SAV+KQGGK WFFL ADYAFGHSL Sbjct: 123 VYFNVGAGTARLTNEECSPYTVHYAYDTVALAKGTGSAVVKQGGKKWFFLTADYAFGHSL 182 Query: 185 ANDTSAVVKASGGTVVGSIKHPPQSSDLSSFLLQAQASKAQILGLANAGEDTVNSIKAAK 244 NDT+AVVKA+GGTVVGS++HP +SD SSFLLQAQ+SKA ILGLANAG DT+N+IKAAK Sbjct: 183 ENDTAAVVKANGGTVVGSVRHPLSASDFSSFLLQAQSSKADILGLANAGGDTINAIKAAK 242 Query: 245 EFGVTKTMKLVGLLMVINDIHALGLANAEGLMMTDSWYWDKDEPSRKFAERFFQKMKKMP 304 EFG+TK MK+ GLLM INDIH+LGL N EGL+MTDSWYWD ++ +RKFA RFF KMKKMP Sbjct: 243 EFGITKNMKIAGLLMFINDIHSLGLKNTEGLLMTDSWYWDMNDDTRKFANRFFGKMKKMP 302 Query: 305 STHQAAAYSATTTYLKAVQAIGTDDSTKVMAQLKKTRIDDFYNKGSIRADGRNIHDMYLY 364 S+ QAA YSA +TYLKAV+A TDD KVMA+LKK +I DFYNK IRADGRNIHDMYL Sbjct: 303 SSLQAADYSAISTYLKAVEAAKTDDPDKVMAELKKMKISDFYNKSYIRADGRNIHDMYLM 362 Query: 365 QVKSPAESKKPWDYLKLLETIPGEQAFTSVADSKCSLLKQ 404 QVK+PA+SKKPWDYLK++ TIPG+QAFT+ A+SKC+LLK+ Sbjct: 363 QVKAPADSKKPWDYLKIVTTIPGDQAFTTPAESKCALLKK 402 >E2SXB1.1 E2SXB1_9RALS Amino acid uptake ABC transporter Length = 402 Score = 627 bits (1616), Expect = e-177, Method: Compositional matrix adjust. Identities = 295/400 (73%), Positives = 347/400 (86%), Gaps = 2/400 (0%) Query: 7 LRRLAAACAIAGIFSGA--ALAQVSNDAVRIGFITDMSGPYADTDGLGGLEAIRMAVADF 64 L++LA A G+ + A A AQVS D V+IG+ITD+SG YAD DG GG+EA++MA+ D Sbjct: 3 LKKLAGALIAVGLGAAAFGAHAQVSGDKVKIGYITDLSGLYADIDGQGGVEAVKMAIEDA 62 Query: 65 GGTVLGKPIEVISADHQNKADIAATRAREWADERGLDMLIGGVNSATALSMNKVMAEKKR 124 GG VLGKPIE+++ADHQNKADIAA++AREW D++GLDML+GG NSAT L+MNKV +EKKR Sbjct: 63 GGKVLGKPIELVTADHQNKADIAASKAREWMDQQGLDMLLGGTNSATGLAMNKVASEKKR 122 Query: 125 VYINIGAGTARLTNEECTPYTVHYEYDTVALAKGTASAVIKQGGKSWFFLVADYAFGHSL 184 V+I+IGAGTARLTNEECTPYT+HY YDTVALAKGT SAV+KQGGKSWFFL ADYAFGHSL Sbjct: 123 VFIDIGAGTARLTNEECTPYTIHYAYDTVALAKGTGSAVVKQGGKSWFFLTADYAFGHSL 182 Query: 185 ANDTSAVVKASGGTVVGSIKHPPQSSDLSSFLLQAQASKAQILGLANAGEDTVNSIKAAK 244 NDT+AVVKA+GGTVVGS+KHP +SD SS+LLQAQ+SKAQILGLANAG DT+NSIKAAK Sbjct: 183 ENDTTAVVKANGGTVVGSVKHPLSASDFSSYLLQAQSSKAQILGLANAGGDTINSIKAAK 242 Query: 245 EFGVTKTMKLVGLLMVINDIHALGLANAEGLMMTDSWYWDKDEPSRKFAERFFQKMKKMP 304 EFG+TKTMK+ GLLM IND+H+LGL AEGL+MTDSWYWD ++ SRKFA R+F KMKKMP Sbjct: 243 EFGITKTMKIAGLLMFINDVHSLGLQTAEGLLMTDSWYWDMNDASRKFANRYFMKMKKMP 302 Query: 305 STHQAAAYSATTTYLKAVQAIGTDDSTKVMAQLKKTRIDDFYNKGSIRADGRNIHDMYLY 364 S+ QAA YSA + Y+KAV A GTDD KV+AQLKKT+IDDFY KG IR DGR IHDMYL Sbjct: 303 SSLQAADYSAVSNYIKAVAAAGTDDPDKVIAQLKKTKIDDFYTKGYIRQDGRAIHDMYLL 362 Query: 365 QVKSPAESKKPWDYLKLLETIPGEQAFTSVADSKCSLLKQ 404 QVK+PAESKKPWDYLK++ TIPGEQAFT+ A+SKCSL+K+ Sbjct: 363 QVKTPAESKKPWDYLKVVATIPGEQAFTTPAESKCSLMKK 402 >C6BHA4.1 C6BHA4_RALP1 Extracellular ligand-binding receptor Length = 402 Score = 626 bits (1615), Expect = e-177, Method: Compositional matrix adjust. Identities = 295/400 (73%), Positives = 347/400 (86%), Gaps = 2/400 (0%) Query: 7 LRRLAAACAIAGIFSGA--ALAQVSNDAVRIGFITDMSGPYADTDGLGGLEAIRMAVADF 64 L++LA A G+ + A A AQVS D V+IG+ITD+SG YAD DG GG+EA++MA+ D Sbjct: 3 LKKLAGALMAIGLGAAAFGAHAQVSGDKVKIGYITDLSGLYADIDGQGGVEAVKMAIEDA 62 Query: 65 GGTVLGKPIEVISADHQNKADIAATRAREWADERGLDMLIGGVNSATALSMNKVMAEKKR 124 GG VLGKPIE+++ADHQNKADIAA++AREW D++GLDML+GG NSAT L+MNKV +EKKR Sbjct: 63 GGKVLGKPIELVTADHQNKADIAASKAREWMDQQGLDMLLGGTNSATGLAMNKVASEKKR 122 Query: 125 VYINIGAGTARLTNEECTPYTVHYEYDTVALAKGTASAVIKQGGKSWFFLVADYAFGHSL 184 V+I+IGAGTARLTNEECTPYT+HY YDTVALAKGT SAV+KQGGKSWFFL ADYAFGHSL Sbjct: 123 VFIDIGAGTARLTNEECTPYTIHYAYDTVALAKGTGSAVVKQGGKSWFFLTADYAFGHSL 182 Query: 185 ANDTSAVVKASGGTVVGSIKHPPQSSDLSSFLLQAQASKAQILGLANAGEDTVNSIKAAK 244 NDT+AVVKA+GGTVVGS+KHP +SD SS+LLQAQ+SKAQILGLANAG DT+NSIKAAK Sbjct: 183 ENDTTAVVKANGGTVVGSVKHPLSASDFSSYLLQAQSSKAQILGLANAGGDTINSIKAAK 242 Query: 245 EFGVTKTMKLVGLLMVINDIHALGLANAEGLMMTDSWYWDKDEPSRKFAERFFQKMKKMP 304 EFG+TKTMK+ GLLM IND+H+LGL AEGL+MTDSWYWD ++ SRKFA R+F KMKKMP Sbjct: 243 EFGITKTMKIAGLLMFINDVHSLGLQTAEGLLMTDSWYWDMNDASRKFANRYFMKMKKMP 302 Query: 305 STHQAAAYSATTTYLKAVQAIGTDDSTKVMAQLKKTRIDDFYNKGSIRADGRNIHDMYLY 364 S+ QAA YSA + Y+KAV A GTDD KV+AQLKKT+IDDFY KG IR DGR IHDMYL Sbjct: 303 SSLQAADYSAVSNYIKAVAAAGTDDPDKVIAQLKKTKIDDFYTKGYIRQDGRAIHDMYLL 362 Query: 365 QVKSPAESKKPWDYLKLLETIPGEQAFTSVADSKCSLLKQ 404 QVK+PAESKKPWDYLK++ TIPGEQAFT+ A+SKCSL+K+ Sbjct: 363 QVKTPAESKKPWDYLKVVATIPGEQAFTTPAESKCSLMKK 402 >B2UGX3.1 B2UGX3_RALPJ Putative substrate-binding periplasmic (PBP) ABC transporter protein Length = 402 Score = 625 bits (1612), Expect = e-177, Method: Compositional matrix adjust. Identities = 295/400 (73%), Positives = 346/400 (86%), Gaps = 2/400 (0%) Query: 7 LRRLAAACAIAGIFSGA--ALAQVSNDAVRIGFITDMSGPYADTDGLGGLEAIRMAVADF 64 L++LA A G+ + A A AQVS D V+IG+ITD+SG YAD DG GG+EA++MA+ D Sbjct: 3 LKKLAGALMAVGLGAAAFGAHAQVSGDKVKIGYITDLSGLYADIDGQGGVEAVKMAIEDA 62 Query: 65 GGTVLGKPIEVISADHQNKADIAATRAREWADERGLDMLIGGVNSATALSMNKVMAEKKR 124 GG VLGKPIE+++ADHQNKADIAA++AREW D++GLDML+GG NSAT L+MNKV +EKKR Sbjct: 63 GGKVLGKPIELVTADHQNKADIAASKAREWMDQQGLDMLLGGTNSATGLAMNKVASEKKR 122 Query: 125 VYINIGAGTARLTNEECTPYTVHYEYDTVALAKGTASAVIKQGGKSWFFLVADYAFGHSL 184 V+I+IGAGTARLTNEECTPYT+HY YDTVALAKGT SAV+KQGGKSWFFL ADYAFGHSL Sbjct: 123 VFIDIGAGTARLTNEECTPYTIHYAYDTVALAKGTGSAVVKQGGKSWFFLTADYAFGHSL 182 Query: 185 ANDTSAVVKASGGTVVGSIKHPPQSSDLSSFLLQAQASKAQILGLANAGEDTVNSIKAAK 244 NDT+AVVKA+GGTVVGS+KHP +SD SS+LLQAQ+SKAQILGLANAG DT+NSIKAAK Sbjct: 183 ENDTTAVVKANGGTVVGSVKHPLSASDFSSYLLQAQSSKAQILGLANAGGDTINSIKAAK 242 Query: 245 EFGVTKTMKLVGLLMVINDIHALGLANAEGLMMTDSWYWDKDEPSRKFAERFFQKMKKMP 304 EFG+TKTMK+ GLLM IND+H+LGL AEGL+MTDSWYWD + SRKFA R+F KMKKMP Sbjct: 243 EFGITKTMKIAGLLMFINDVHSLGLQTAEGLLMTDSWYWDMTDASRKFANRYFMKMKKMP 302 Query: 305 STHQAAAYSATTTYLKAVQAIGTDDSTKVMAQLKKTRIDDFYNKGSIRADGRNIHDMYLY 364 S+ QAA YSA + Y+KAV A GTDD KV+AQLKKT+IDDFY KG IR DGR IHDMYL Sbjct: 303 SSLQAADYSAVSNYIKAVAAAGTDDPDKVIAQLKKTKIDDFYTKGYIRQDGRAIHDMYLL 362 Query: 365 QVKSPAESKKPWDYLKLLETIPGEQAFTSVADSKCSLLKQ 404 QVK+PAESKKPWDYLK++ TIPGEQAFT+ A+SKCSL+K+ Sbjct: 363 QVKTPAESKKPWDYLKVVATIPGEQAFTTPAESKCSLMKK 402 >F1W2R9.1 F1W2R9_9BURK Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein Length = 401 Score = 623 bits (1607), Expect = e-176, Method: Compositional matrix adjust. Identities = 297/399 (74%), Positives = 337/399 (84%), Gaps = 2/399 (0%) Query: 8 RRLAAACAIAGIFSGA--ALAQVSNDAVRIGFITDMSGPYADTDGLGGLEAIRMAVADFG 65 R A +I +F+ A AQ +++ +RIGFITDMSGPYADTDG GGLEAIRMAV D G Sbjct: 3 HRTLIAASITLLFAAGTHAQAQSASEPIRIGFITDMSGPYADTDGAGGLEAIRMAVEDAG 62 Query: 66 GTVLGKPIEVISADHQNKADIAATRAREWADERGLDMLIGGVNSATALSMNKVMAEKKRV 125 G VLGK IE++SADHQNKAD AA AREW D R L +LIGGVNS L+MN VMAEKK+V Sbjct: 63 GKVLGKKIEILSADHQNKADTAAVTAREWVDRRNLKLLIGGVNSGAGLAMNNVMAEKKQV 122 Query: 126 YINIGAGTARLTNEECTPYTVHYEYDTVALAKGTASAVIKQGGKSWFFLVADYAFGHSLA 185 YINIGA TA+LTNEECTPYTVHYEYDTVALAKGT SAV+ GGKSWFFL+ADYAFGHSL Sbjct: 123 YINIGAATAKLTNEECTPYTVHYEYDTVALAKGTGSAVVAAGGKSWFFLIADYAFGHSLF 182 Query: 186 NDTSAVVKASGGTVVGSIKHPPQSSDLSSFLLQAQASKAQILGLANAGEDTVNSIKAAKE 245 DTS V+KASGGTVVGS KHPP ++D+SSF+LQAQASKAQ+LGLANAG DT+NSIK+A++ Sbjct: 183 ADTSEVIKASGGTVVGSAKHPPNANDMSSFILQAQASKAQVLGLANAGSDTINSIKSARD 242 Query: 246 FGVTKTMKLVGLLMVINDIHALGLANAEGLMMTDSWYWDKDEPSRKFAERFFQKMKKMPS 305 FG+T+ MK+ GLLMVINDIH LGL A+GL+MTDSWYWDKDE SRKFA RFF KMKKMPS Sbjct: 243 FGLTRDMKIAGLLMVINDIHGLGLPVAQGLLMTDSWYWDKDEASRKFANRFFLKMKKMPS 302 Query: 306 THQAAAYSATTTYLKAVQAIGTDDSTKVMAQLKKTRIDDFYNKGSIRADGRNIHDMYLYQ 365 THQAAAYSATTTYL+AV TDD+ VMA+LKK ++DDFY+KG IR DGR IHDMYL Q Sbjct: 303 THQAAAYSATTTYLRAVTQAKTDDADTVMAELKKMKLDDFYSKGYIRQDGRYIHDMYLMQ 362 Query: 366 VKSPAESKKPWDYLKLLETIPGEQAFTSVADSKCSLLKQ 404 VK+PAESKKPWDYLKL+ TIPGE+AFT VADSKC LLK+ Sbjct: 363 VKTPAESKKPWDYLKLVATIPGEEAFTKVADSKCYLLKK 401 >D8NUZ4.1 D8NUZ4_RALSO Putative branched-chain amino acid transport system permease, periplasmic component Length = 402 Score = 620 bits (1600), Expect = e-176, Method: Compositional matrix adjust. Identities = 293/399 (73%), Positives = 346/399 (86%), Gaps = 2/399 (0%) Query: 8 RRLAAACAIAGIFSGA--ALAQVSNDAVRIGFITDMSGPYADTDGLGGLEAIRMAVADFG 65 ++LA A AG+ A A AQVS D V+IG+ITD+SG YAD DG GG+EAI+MA+ D G Sbjct: 4 KKLAGALMAAGLGLAASGAHAQVSGDKVKIGYITDLSGLYADIDGQGGVEAIKMAIEDAG 63 Query: 66 GTVLGKPIEVISADHQNKADIAATRAREWADERGLDMLIGGVNSATALSMNKVMAEKKRV 125 G VLGKPIE+I+ADHQNKADIAA++AREW D++GLD+L+GG NSAT+L+M+KV AEKKRV Sbjct: 64 GKVLGKPIELITADHQNKADIAASKAREWMDQQGLDLLVGGTNSATSLAMSKVAAEKKRV 123 Query: 126 YINIGAGTARLTNEECTPYTVHYEYDTVALAKGTASAVIKQGGKSWFFLVADYAFGHSLA 185 +I IGAGTARLTNEECTPYT+HY YDTVALAKGT SAV+KQGGKSWFFL ADYAFGHSL Sbjct: 124 FIGIGAGTARLTNEECTPYTIHYAYDTVALAKGTGSAVVKQGGKSWFFLTADYAFGHSLE 183 Query: 186 NDTSAVVKASGGTVVGSIKHPPQSSDLSSFLLQAQASKAQILGLANAGEDTVNSIKAAKE 245 NDT+AVVKA+GGTVVGS+KHP +SD SS+LLQAQ+SKAQILGLANAG DT+N+IKAAKE Sbjct: 184 NDTAAVVKANGGTVVGSVKHPLSASDFSSYLLQAQSSKAQILGLANAGGDTINAIKAAKE 243 Query: 246 FGVTKTMKLVGLLMVINDIHALGLANAEGLMMTDSWYWDKDEPSRKFAERFFQKMKKMPS 305 FG+TKTMK+ GLLM IND+H+LGL AEGL+MTDSWYWD ++ +RKFA R+F KMKKMPS Sbjct: 244 FGITKTMKIAGLLMFINDVHSLGLQTAEGLLMTDSWYWDMNDATRKFATRYFAKMKKMPS 303 Query: 306 THQAAAYSATTTYLKAVQAIGTDDSTKVMAQLKKTRIDDFYNKGSIRADGRNIHDMYLYQ 365 + QAA YSA + Y+KAV A GTDD KV+AQLKKT+IDDFY KG+IR DGR IHDMYL Q Sbjct: 304 SLQAADYSAVSNYIKAVAAAGTDDPDKVIAQLKKTKIDDFYTKGTIRQDGRGIHDMYLMQ 363 Query: 366 VKSPAESKKPWDYLKLLETIPGEQAFTSVADSKCSLLKQ 404 VK+PAESKKPWDY+K++ TIPGEQAFT+ A+SKC LLK+ Sbjct: 364 VKTPAESKKPWDYMKIVATIPGEQAFTTPAESKCPLLKK 402 >Q8XU51.1 Q8XU51_RALSO Putative substrate-binding periplasmic (Pbp) abc transporter protein Length = 402 Score = 619 bits (1597), Expect = e-175, Method: Compositional matrix adjust. Identities = 291/400 (72%), Positives = 349/400 (87%), Gaps = 2/400 (0%) Query: 7 LRRLAAACAIAGIFSGA--ALAQVSNDAVRIGFITDMSGPYADTDGLGGLEAIRMAVADF 64 L++LA A AG+ A A AQVS D V+IG+ITD+SG YAD DG GG+EA++MA+ D Sbjct: 3 LKKLAGALMAAGLGLAASGAHAQVSGDKVKIGYITDLSGLYADIDGQGGVEAVKMAIEDE 62 Query: 65 GGTVLGKPIEVISADHQNKADIAATRAREWADERGLDMLIGGVNSATALSMNKVMAEKKR 124 GG VLGKPIE+++ADHQNKADIAA++AREW D++GLDML+GG NSAT+L+M+KV AEKKR Sbjct: 63 GGKVLGKPIELVTADHQNKADIAASKAREWMDQQGLDMLVGGTNSATSLAMSKVAAEKKR 122 Query: 125 VYINIGAGTARLTNEECTPYTVHYEYDTVALAKGTASAVIKQGGKSWFFLVADYAFGHSL 184 V+I IGAGTARLTNEECTPYT+HY YDTVALAKGT SAV+KQGGKSWFFL ADYAFGHSL Sbjct: 123 VFIGIGAGTARLTNEECTPYTIHYAYDTVALAKGTGSAVVKQGGKSWFFLTADYAFGHSL 182 Query: 185 ANDTSAVVKASGGTVVGSIKHPPQSSDLSSFLLQAQASKAQILGLANAGEDTVNSIKAAK 244 NDT+AVVKA+GGTVVGS+KHP +SD SS+LLQAQASKAQILGLANAG DT+NSIKAAK Sbjct: 183 ENDTAAVVKANGGTVVGSVKHPLSASDFSSYLLQAQASKAQILGLANAGGDTINSIKAAK 242 Query: 245 EFGVTKTMKLVGLLMVINDIHALGLANAEGLMMTDSWYWDKDEPSRKFAERFFQKMKKMP 304 EFG+TKTMK+ GLLM IND+H+LGL AEGL+MTDSWYWD ++ +RKFA R+F KMKKMP Sbjct: 243 EFGITKTMKIAGLLMFINDVHSLGLQTAEGLLMTDSWYWDMNDATRKFATRYFSKMKKMP 302 Query: 305 STHQAAAYSATTTYLKAVQAIGTDDSTKVMAQLKKTRIDDFYNKGSIRADGRNIHDMYLY 364 S+ QAA YSA + Y+KAV A GTDD KV+AQLKKT+++DF++KG+IRADGR +HDMYL Sbjct: 303 SSLQAADYSAVSNYIKAVAAAGTDDPDKVIAQLKKTQLNDFFSKGTIRADGRYVHDMYLM 362 Query: 365 QVKSPAESKKPWDYLKLLETIPGEQAFTSVADSKCSLLKQ 404 QVK+PAESKKPWDY+K++ TIPG+QAFT+ A+SKC LLK+ Sbjct: 363 QVKTPAESKKPWDYMKIVATIPGDQAFTTPAESKCPLLKK 402 >B3R7N8.1 B3R7N8_CUPTR Putative branched-chain amino acid transport system permease, periplasmic component Length = 402 Score = 618 bits (1593), Expect = e-175, Method: Compositional matrix adjust. Identities = 290/384 (75%), Positives = 336/384 (87%) Query: 21 SGAALAQVSNDAVRIGFITDMSGPYADTDGLGGLEAIRMAVADFGGTVLGKPIEVISADH 80 S A AQVS D V+IG+ITDMSG YAD DG GGLEAI+MAV D GG VLGKPIE++SADH Sbjct: 19 SFGAAAQVSGDTVKIGYITDMSGLYADIDGPGGLEAIKMAVEDRGGKVLGKPIEIVSADH 78 Query: 81 QNKADIAATRAREWADERGLDMLIGGVNSATALSMNKVMAEKKRVYINIGAGTARLTNEE 140 QNKADIAA++AREW D++GLDML+GG NS TAL+MNKV +EKKRVYINIGAGTARLTNEE Sbjct: 79 QNKADIAASKAREWMDQQGLDMLLGGTNSGTALAMNKVASEKKRVYINIGAGTARLTNEE 138 Query: 141 CTPYTVHYEYDTVALAKGTASAVIKQGGKSWFFLVADYAFGHSLANDTSAVVKASGGTVV 200 C+PYTVHY YDTVALAKGT SAV+KQGGKSWFFL ADYAFGHSL DT+AVVKA+GGTVV Sbjct: 139 CSPYTVHYAYDTVALAKGTGSAVVKQGGKSWFFLTADYAFGHSLEQDTAAVVKANGGTVV 198 Query: 201 GSIKHPPQSSDLSSFLLQAQASKAQILGLANAGEDTVNSIKAAKEFGVTKTMKLVGLLMV 260 G ++HP +SD SSFLLQAQ+SKAQILGLANAG DT+N+IKAAKEFG+TK+MK+ GLLM Sbjct: 199 GQVRHPLSASDFSSFLLQAQSSKAQILGLANAGGDTINAIKAAKEFGITKSMKIAGLLMF 258 Query: 261 INDIHALGLANAEGLMMTDSWYWDKDEPSRKFAERFFQKMKKMPSTHQAAAYSATTTYLK 320 IND+H+LGL N EGL+MTDSWYWD ++ +RKFA RFF KMKKMPS+ QAA YSA +TYLK Sbjct: 259 INDVHSLGLKNTEGLLMTDSWYWDMNDDTRKFANRFFGKMKKMPSSLQAADYSAASTYLK 318 Query: 321 AVQAIGTDDSTKVMAQLKKTRIDDFYNKGSIRADGRNIHDMYLYQVKSPAESKKPWDYLK 380 AV+A TDD KVMA+LKK +I+DFY KG IR DGR IHDMYL QVK+ AESKKPWDYLK Sbjct: 319 AVEAAKTDDPDKVMAELKKMKINDFYTKGYIRQDGRGIHDMYLMQVKTAAESKKPWDYLK 378 Query: 381 LLETIPGEQAFTSVADSKCSLLKQ 404 ++ TIPG+QAFT+VA+SKC++LK+ Sbjct: 379 VVATIPGDQAFTTVAESKCAMLKK 402