BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0035.0215.p (68 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value D8J0G0.1 D8J0G0_HERSS Cold shock-like transcription regulator pr... 139 9e-32 F1DLK3.1 F1DLK3_9BURK Cold shock-like protein CspD 128 4e-28 A1X1M1.1 A1X1M1_9BURK Cold shock transcription regulator 128 4e-28 C0DTJ1.1 C0DTJ1_EIKCO Putative uncharacterized protein 126 1e-27 A6SY61.1 A6SY61_JANMA Cold shock transcription regulator protein 126 1e-27 A4G5Y5.1 A4G5Y5_HERAR Cold shock-like protein cspE (CSP-E) 126 1e-27 F1VWC8.1 F1VWC8_9BURK Cold shock protein CspA 126 1e-27 E4QPQ0.1 E4QPQ0_METS6 Cold-shock DNA-binding domain protein 125 2e-27 C6XDH4.1 C6XDH4_METSD Cold-shock DNA-binding domain protein 125 2e-27 C3XB24.1 C3XB24_OXAFO Cold shock transcription regulator 125 2e-27 >D8J0G0.1 D8J0G0_HERSS Cold shock-like transcription regulator protein Length = 68 Score = 139 bits (351), Expect = 9e-32, Method: Compositional matrix adjust. Identities = 68/68 (100%), Positives = 68/68 (100%) Query: 1 MATGTVKWFNDAKGFGFITPDEGGEDLFAHFSAIQSNGFKSLKENQRVSFEVTTGPKGKQ 60 MATGTVKWFNDAKGFGFITPDEGGEDLFAHFSAIQSNGFKSLKENQRVSFEVTTGPKGKQ Sbjct: 1 MATGTVKWFNDAKGFGFITPDEGGEDLFAHFSAIQSNGFKSLKENQRVSFEVTTGPKGKQ 60 Query: 61 ASNIVPAA 68 ASNIVPAA Sbjct: 61 ASNIVPAA 68 >F1DLK3.1 F1DLK3_9BURK Cold shock-like protein CspD Length = 67 Score = 128 bits (321), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 61/66 (92%), Positives = 63/66 (95%) Query: 1 MATGTVKWFNDAKGFGFITPDEGGEDLFAHFSAIQSNGFKSLKENQRVSFEVTTGPKGKQ 60 MATG VKWFND+KGFGFITPDEGGEDLFAHFSAIQSNGFKSL+ENQRVSFEVT GPKGKQ Sbjct: 1 MATGIVKWFNDSKGFGFITPDEGGEDLFAHFSAIQSNGFKSLQENQRVSFEVTAGPKGKQ 60 Query: 61 ASNIVP 66 ASNI P Sbjct: 61 ASNIQP 66 >A1X1M1.1 A1X1M1_9BURK Cold shock transcription regulator Length = 67 Score = 128 bits (321), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 61/66 (92%), Positives = 63/66 (95%) Query: 1 MATGTVKWFNDAKGFGFITPDEGGEDLFAHFSAIQSNGFKSLKENQRVSFEVTTGPKGKQ 60 MATG VKWFND+KGFGFITPDEGGEDLFAHFSAIQSNGFKSL+ENQRVSFEVT GPKGKQ Sbjct: 1 MATGIVKWFNDSKGFGFITPDEGGEDLFAHFSAIQSNGFKSLQENQRVSFEVTAGPKGKQ 60 Query: 61 ASNIVP 66 ASNI P Sbjct: 61 ASNIQP 66 >C0DTJ1.1 C0DTJ1_EIKCO Putative uncharacterized protein Length = 67 Score = 126 bits (316), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 61/67 (91%), Positives = 63/67 (94%) Query: 1 MATGTVKWFNDAKGFGFITPDEGGEDLFAHFSAIQSNGFKSLKENQRVSFEVTTGPKGKQ 60 MATGTVKWFNDAKGFGFITPDEGGEDLFAHFSAI NGFK+LKE Q+VSFEVTTGPKGKQ Sbjct: 1 MATGTVKWFNDAKGFGFITPDEGGEDLFAHFSAINMNGFKTLKEGQKVSFEVTTGPKGKQ 60 Query: 61 ASNIVPA 67 ASNI PA Sbjct: 61 ASNIQPA 67 >A6SY61.1 A6SY61_JANMA Cold shock transcription regulator protein Length = 67 Score = 126 bits (316), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 60/66 (90%), Positives = 63/66 (95%) Query: 1 MATGTVKWFNDAKGFGFITPDEGGEDLFAHFSAIQSNGFKSLKENQRVSFEVTTGPKGKQ 60 MATG VKWFND+KGFGFITPDEGGEDLFAHFSAIQS+GFKSL+ENQRVSFEVT GPKGKQ Sbjct: 1 MATGIVKWFNDSKGFGFITPDEGGEDLFAHFSAIQSSGFKSLQENQRVSFEVTAGPKGKQ 60 Query: 61 ASNIVP 66 ASNI P Sbjct: 61 ASNIQP 66 >A4G5Y5.1 A4G5Y5_HERAR Cold shock-like protein cspE (CSP-E) Length = 67 Score = 126 bits (316), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 60/66 (90%), Positives = 63/66 (95%) Query: 1 MATGTVKWFNDAKGFGFITPDEGGEDLFAHFSAIQSNGFKSLKENQRVSFEVTTGPKGKQ 60 MATG VKWFND+KGFGFITPDEGGEDLFAHFSAIQS+GFKSL+ENQRVSFEVT GPKGKQ Sbjct: 1 MATGIVKWFNDSKGFGFITPDEGGEDLFAHFSAIQSSGFKSLQENQRVSFEVTAGPKGKQ 60 Query: 61 ASNIVP 66 ASNI P Sbjct: 61 ASNIQP 66 >F1VWC8.1 F1VWC8_9BURK Cold shock protein CspA Length = 67 Score = 126 bits (316), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 60/66 (90%), Positives = 63/66 (95%) Query: 1 MATGTVKWFNDAKGFGFITPDEGGEDLFAHFSAIQSNGFKSLKENQRVSFEVTTGPKGKQ 60 MATG VKWFND+KGFGFITPDEGGEDLFAHFSAIQS+GFKSL+ENQRVSFEVT GPKGKQ Sbjct: 1 MATGIVKWFNDSKGFGFITPDEGGEDLFAHFSAIQSSGFKSLQENQRVSFEVTAGPKGKQ 60 Query: 61 ASNIVP 66 ASNI P Sbjct: 61 ASNIQP 66 >E4QPQ0.1 E4QPQ0_METS6 Cold-shock DNA-binding domain protein Length = 67 Score = 125 bits (315), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 60/67 (89%), Positives = 64/67 (95%) Query: 1 MATGTVKWFNDAKGFGFITPDEGGEDLFAHFSAIQSNGFKSLKENQRVSFEVTTGPKGKQ 60 MATGTVKWFNDAKGFGFITPD+GGEDLFAHFSAI SNGFKSLKEN+RVSF++TTGPKGKQ Sbjct: 1 MATGTVKWFNDAKGFGFITPDDGGEDLFAHFSAIASNGFKSLKENERVSFDITTGPKGKQ 60 Query: 61 ASNIVPA 67 ASNI A Sbjct: 61 ASNIQKA 67 >C6XDH4.1 C6XDH4_METSD Cold-shock DNA-binding domain protein Length = 67 Score = 125 bits (315), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 60/67 (89%), Positives = 64/67 (95%) Query: 1 MATGTVKWFNDAKGFGFITPDEGGEDLFAHFSAIQSNGFKSLKENQRVSFEVTTGPKGKQ 60 MATGTVKWFNDAKGFGFITPD+GGEDLFAHFSAI SNGFKSLKEN+RVSF++TTGPKGKQ Sbjct: 1 MATGTVKWFNDAKGFGFITPDDGGEDLFAHFSAIASNGFKSLKENERVSFDITTGPKGKQ 60 Query: 61 ASNIVPA 67 ASNI A Sbjct: 61 ASNIQKA 67 >C3XB24.1 C3XB24_OXAFO Cold shock transcription regulator Length = 67 Score = 125 bits (314), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 59/64 (92%), Positives = 64/64 (100%) Query: 1 MATGTVKWFNDAKGFGFITPDEGGEDLFAHFSAIQSNGFKSLKENQRVSFEVTTGPKGKQ 60 MATGTVKWFND+KGFGFITPDEGGED+FAHFSAI+S+GFKSLKENQRVSFEVTTGPKGKQ Sbjct: 1 MATGTVKWFNDSKGFGFITPDEGGEDVFAHFSAIKSDGFKSLKENQRVSFEVTTGPKGKQ 60 Query: 61 ASNI 64 A+NI Sbjct: 61 AANI 64