BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0035.0163.p (261 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value D8IZX3.1 D8IZX3_HERSS GntR family transcription regulator protein 535 e-150 A4G5Z8.1 A4G5Z8_HERAR Transcriptional regulator, GntR family 372 e-101 A6SY48.1 A6SY48_JANMA Transcriptional regulator, GntR family 371 e-101 F1VWI1.1 F1VWI1_9BURK Transcriptional regulator, GntR family 364 8e-99 B2U704.1 B2U704_RALPJ Transcriptional regulator, GntR family 358 5e-97 E2T179.1 E2T179_9RALS Transcriptional regulator, GntR family 358 5e-97 C6BJI7.1 C6BJI7_RALP1 Transcriptional regulator, GntR family 357 8e-97 Q8XXW6.1 Q8XXW6_RALSO Probable transcription regulator protein 356 2e-96 A3RVQ5.1 A3RVQ5_RALSO Transcriptional regulator, GntR family 355 5e-96 B5SIR6.1 B5SIR6_RALSO Transcription regulator protein 354 8e-96 >D8IZX3.1 D8IZX3_HERSS GntR family transcription regulator protein Length = 334 Score = 535 bits (1378), Expect = e-150, Method: Compositional matrix adjust. Identities = 261/261 (100%), Positives = 261/261 (100%) Query: 1 MSSILPNSNNADAHAAGAGVASPAPTFSPLYQQIKALIMQRLEAGEWKPGELIPSEVELG 60 MSSILPNSNNADAHAAGAGVASPAPTFSPLYQQIKALIMQRLEAGEWKPGELIPSEVELG Sbjct: 74 MSSILPNSNNADAHAAGAGVASPAPTFSPLYQQIKALIMQRLEAGEWKPGELIPSEVELG 133 Query: 61 SRFKVSQGTVRKAIDELAAENLVVRRQGKGTFVATHHETQAQFRFLRLMADSDEPQRPEN 120 SRFKVSQGTVRKAIDELAAENLVVRRQGKGTFVATHHETQAQFRFLRLMADSDEPQRPEN Sbjct: 134 SRFKVSQGTVRKAIDELAAENLVVRRQGKGTFVATHHETQAQFRFLRLMADSDEPQRPEN 193 Query: 121 KIIEVKRVRASAEVARQLDMKSGDSVIFIRRVKSFNGVPIILEDIWLPGAIFKGLTAERL 180 KIIEVKRVRASAEVARQLDMKSGDSVIFIRRVKSFNGVPIILEDIWLPGAIFKGLTAERL Sbjct: 194 KIIEVKRVRASAEVARQLDMKSGDSVIFIRRVKSFNGVPIILEDIWLPGAIFKGLTAERL 253 Query: 181 VEYRGPLYGLFESEFGTRMIRAEERIRAVGADPDAAEFLGVTPQTPLLSVERASFTYGDK 240 VEYRGPLYGLFESEFGTRMIRAEERIRAVGADPDAAEFLGVTPQTPLLSVERASFTYGDK Sbjct: 254 VEYRGPLYGLFESEFGTRMIRAEERIRAVGADPDAAEFLGVTPQTPLLSVERASFTYGDK 313 Query: 241 PVEMRRGLYLTTNHHYQSELS 261 PVEMRRGLYLTTNHHYQSELS Sbjct: 314 PVEMRRGLYLTTNHHYQSELS 334 >A4G5Z8.1 A4G5Z8_HERAR Transcriptional regulator, GntR family Length = 312 Score = 372 bits (956), Expect = e-101, Method: Compositional matrix adjust. Identities = 176/262 (67%), Positives = 216/262 (82%), Gaps = 1/262 (0%) Query: 1 MSSILPNSNNAD-AHAAGAGVASPAPTFSPLYQQIKALIMQRLEAGEWKPGELIPSEVEL 59 MSS P+ + A+ A AAGA P+PTFSPLYQQIKALI + L++GEW+PGELIPSE+EL Sbjct: 51 MSSSHPSLSIANPAQAAGASATVPSPTFSPLYQQIKALITKSLQSGEWRPGELIPSEIEL 110 Query: 60 GSRFKVSQGTVRKAIDELAAENLVVRRQGKGTFVATHHETQAQFRFLRLMADSDEPQRPE 119 +RFKVSQGTVRKAIDEL+AENLVVRRQGKGTFVATHHE +AQFRFLRL D + Q PE Sbjct: 111 ANRFKVSQGTVRKAIDELSAENLVVRRQGKGTFVATHHEARAQFRFLRLKPDVGDAQYPE 170 Query: 120 NKIIEVKRVRASAEVARQLDMKSGDSVIFIRRVKSFNGVPIILEDIWLPGAIFKGLTAER 179 N + E +R+RA A++ARQLD+K+GDSV F++R++SF+G P ILE++WLPG+IFKGL+ ER Sbjct: 171 NTVTEARRLRAPADIARQLDIKTGDSVFFVKRIQSFDGAPTILEELWLPGSIFKGLSLER 230 Query: 180 LVEYRGPLYGLFESEFGTRMIRAEERIRAVGADPDAAEFLGVTPQTPLLSVERASFTYGD 239 +++Y+GP+Y L E+EFG +MIRA E IRAV AD AAE L + TPLLSV R SFTYGD Sbjct: 231 VLQYKGPMYALLETEFGIQMIRAVENIRAVVADQSAAELLMLPLNTPLLSVNRVSFTYGD 290 Query: 240 KPVEMRRGLYLTTNHHYQSELS 261 K VE+RR LY+T NHHYQ+ELS Sbjct: 291 KAVEVRRSLYVTNNHHYQNELS 312 >A6SY48.1 A6SY48_JANMA Transcriptional regulator, GntR family Length = 284 Score = 371 bits (952), Expect = e-101, Method: Compositional matrix adjust. Identities = 176/259 (67%), Positives = 216/259 (83%), Gaps = 4/259 (1%) Query: 3 SILPNSNNADAHAAGAGVASPAPTFSPLYQQIKALIMQRLEAGEWKPGELIPSEVELGSR 62 + LPN NNA A AG A+P+PTFSPLYQQIKALI + L++GEW+PGELIPSEVEL +R Sbjct: 30 TTLPN-NNA---AGSAGGATPSPTFSPLYQQIKALITRSLQSGEWRPGELIPSEVELATR 85 Query: 63 FKVSQGTVRKAIDELAAENLVVRRQGKGTFVATHHETQAQFRFLRLMADSDEPQRPENKI 122 FKVSQGTVRKAIDEL+AENLVVRRQGKGTFVATHHE +AQFRFLRL D EP P+N I Sbjct: 86 FKVSQGTVRKAIDELSAENLVVRRQGKGTFVATHHEARAQFRFLRLKPDVGEPLYPDNTI 145 Query: 123 IEVKRVRASAEVARQLDMKSGDSVIFIRRVKSFNGVPIILEDIWLPGAIFKGLTAERLVE 182 I+ KR+RA A++ARQLD+K+GDSV+F++RV+SF+G P ILE++WLPG IFKGL+ ER+++ Sbjct: 146 IDAKRLRAPADIARQLDIKTGDSVVFLKRVQSFDGAPTILEELWLPGTIFKGLSVERVLQ 205 Query: 183 YRGPLYGLFESEFGTRMIRAEERIRAVGADPDAAEFLGVTPQTPLLSVERASFTYGDKPV 242 Y+GP+Y L E+EFGT+MIRA E I+AV AD A+ L + TPLLSV R SFTYGDKPV Sbjct: 206 YKGPMYALLETEFGTQMIRAVENIKAVVADQVTADLLSLPLNTPLLSVTRVSFTYGDKPV 265 Query: 243 EMRRGLYLTTNHHYQSELS 261 E+RR Y+T NHHY++EL+ Sbjct: 266 EVRRSYYVTNNHHYRNELN 284 >F1VWI1.1 F1VWI1_9BURK Transcriptional regulator, GntR family Length = 258 Score = 364 bits (934), Expect = 8e-99, Method: Compositional matrix adjust. Identities = 178/234 (76%), Positives = 199/234 (85%) Query: 27 FSPLYQQIKALIMQRLEAGEWKPGELIPSEVELGSRFKVSQGTVRKAIDELAAENLVVRR 86 FSPLYQQIKALI L+AGEWKPGELIPSEVEL RFKVSQGTVRKAIDEL++ENLVVRR Sbjct: 24 FSPLYQQIKALITASLQAGEWKPGELIPSEVELAGRFKVSQGTVRKAIDELSSENLVVRR 83 Query: 87 QGKGTFVATHHETQAQFRFLRLMADSDEPQRPENKIIEVKRVRASAEVARQLDMKSGDSV 146 QGKGTFVATHHE +AQFRFLRLM D+ + +N IIEVKR RA A+VAR LD+K D+V Sbjct: 84 QGKGTFVATHHEVRAQFRFLRLMPDAGVAHQADNLIIEVKRQRAPADVARLLDIKPADAV 143 Query: 147 IFIRRVKSFNGVPIILEDIWLPGAIFKGLTAERLVEYRGPLYGLFESEFGTRMIRAEERI 206 IFI+RV+SF G P ILE++WLPG IFKGLTAERLVEY+GP+YGLFE+EFGTRMIRA E+I Sbjct: 144 IFIKRVQSFEGAPAILEELWLPGTIFKGLTAERLVEYKGPMYGLFETEFGTRMIRATEKI 203 Query: 207 RAVGADPDAAEFLGVTPQTPLLSVERASFTYGDKPVEMRRGLYLTTNHHYQSEL 260 RAV AD A +L V TPLLSVER SFTYGDKPVE+RRGLY T +HHYQSEL Sbjct: 204 RAVHADHVACGWLQVVTDTPLLSVERVSFTYGDKPVEVRRGLYRTDSHHYQSEL 257 >B2U704.1 B2U704_RALPJ Transcriptional regulator, GntR family Length = 269 Score = 358 bits (919), Expect = 5e-97, Method: Compositional matrix adjust. Identities = 168/260 (64%), Positives = 209/260 (80%) Query: 2 SSILPNSNNADAHAAGAGVASPAPTFSPLYQQIKALIMQRLEAGEWKPGELIPSEVELGS 61 +++ P+ A A AG A +PTFSPLYQQIK LI+Q L+AGEWKPGE+IPSE+EL + Sbjct: 10 AAMPPSGGEGGASPASAGGAGGSPTFSPLYQQIKTLILQSLQAGEWKPGEMIPSEMELAA 69 Query: 62 RFKVSQGTVRKAIDELAAENLVVRRQGKGTFVATHHETQAQFRFLRLMADSDEPQRPENK 121 R+KVSQGTVRKAIDELAAENLV RRQGKGTFV TH+E QFRFLRLM + E P ++ Sbjct: 70 RYKVSQGTVRKAIDELAAENLVARRQGKGTFVTTHYEEGVQFRFLRLMPEQGEQHYPSSR 129 Query: 122 IIEVKRVRASAEVARQLDMKSGDSVIFIRRVKSFNGVPIILEDIWLPGAIFKGLTAERLV 181 ++E KR+RA AE+AR L++K+GDSV+ IRR+ F+G P +LE+IWLPGA FKGLTAE+L Sbjct: 130 VLECKRMRAPAEIARLLELKAGDSVVQIRRILFFSGEPTVLEEIWLPGASFKGLTAEKLT 189 Query: 182 EYRGPLYGLFESEFGTRMIRAEERIRAVGADPDAAEFLGVTPQTPLLSVERASFTYGDKP 241 E++GP+Y FE+EFG RM+RA ERIRAV ADP AE L V ++PLLSVER S T+GDKP Sbjct: 190 EWKGPMYAFFEAEFGVRMLRATERIRAVAADPTTAELLSVAAESPLLSVERVSHTFGDKP 249 Query: 242 VEMRRGLYLTTNHHYQSELS 261 VE+RRGLY+TT H+YQ+EL+ Sbjct: 250 VEIRRGLYVTTRHYYQNELN 269 >E2T179.1 E2T179_9RALS Transcriptional regulator, GntR family Length = 269 Score = 358 bits (919), Expect = 5e-97, Method: Compositional matrix adjust. Identities = 168/260 (64%), Positives = 209/260 (80%) Query: 2 SSILPNSNNADAHAAGAGVASPAPTFSPLYQQIKALIMQRLEAGEWKPGELIPSEVELGS 61 +++ P+ A A AG A +PTFSPLYQQIK LI+Q L+AGEWKPGE+IPSE+EL + Sbjct: 10 AAMPPSGGEGGASPASAGGAGGSPTFSPLYQQIKTLILQSLQAGEWKPGEMIPSEMELAA 69 Query: 62 RFKVSQGTVRKAIDELAAENLVVRRQGKGTFVATHHETQAQFRFLRLMADSDEPQRPENK 121 R+KVSQGTVRKAIDELAAENLV RRQGKGTFV TH+E QFRFLRLM + E P ++ Sbjct: 70 RYKVSQGTVRKAIDELAAENLVARRQGKGTFVTTHYEEGVQFRFLRLMPEQGEQHYPSSR 129 Query: 122 IIEVKRVRASAEVARQLDMKSGDSVIFIRRVKSFNGVPIILEDIWLPGAIFKGLTAERLV 181 ++E KR+RA AE+AR L++K+GDSV+ IRR+ F+G P +LE+IWLPGA FKGLTAE+L Sbjct: 130 VLECKRMRAPAEIARLLELKAGDSVVQIRRILFFSGEPTVLEEIWLPGASFKGLTAEKLT 189 Query: 182 EYRGPLYGLFESEFGTRMIRAEERIRAVGADPDAAEFLGVTPQTPLLSVERASFTYGDKP 241 E++GP+Y FE+EFG RM+RA ERIRAV ADP AE L V ++PLLSVER S T+GDKP Sbjct: 190 EWKGPMYAFFEAEFGVRMLRATERIRAVAADPTTAELLSVAAESPLLSVERVSHTFGDKP 249 Query: 242 VEMRRGLYLTTNHHYQSELS 261 VE+RRGLY+TT H+YQ+EL+ Sbjct: 250 VEIRRGLYVTTRHYYQNELN 269 >C6BJI7.1 C6BJI7_RALP1 Transcriptional regulator, GntR family Length = 258 Score = 357 bits (917), Expect = 8e-97, Method: Compositional matrix adjust. Identities = 168/256 (65%), Positives = 206/256 (80%) Query: 6 PNSNNADAHAAGAGVASPAPTFSPLYQQIKALIMQRLEAGEWKPGELIPSEVELGSRFKV 65 P+ A A AG A +PTFSPLYQQIK LI+Q L+AGEWKPGE+IPSE+EL +R+KV Sbjct: 3 PSGGEGGASPASAGGAGGSPTFSPLYQQIKTLILQSLQAGEWKPGEMIPSEMELAARYKV 62 Query: 66 SQGTVRKAIDELAAENLVVRRQGKGTFVATHHETQAQFRFLRLMADSDEPQRPENKIIEV 125 SQGTVRKAIDELAAENLV RRQGKGTFV TH+E QFRFLRLM + E P ++++E Sbjct: 63 SQGTVRKAIDELAAENLVARRQGKGTFVTTHYEEGVQFRFLRLMPEQGEQHYPSSRVLEC 122 Query: 126 KRVRASAEVARQLDMKSGDSVIFIRRVKSFNGVPIILEDIWLPGAIFKGLTAERLVEYRG 185 KR+RA AE+AR L++K+GDSV+ IRR+ F+G P +LE+IWLPGA FKGLTAE+L E++G Sbjct: 123 KRMRAPAEIARLLELKAGDSVVQIRRILFFSGEPTVLEEIWLPGASFKGLTAEKLTEWKG 182 Query: 186 PLYGLFESEFGTRMIRAEERIRAVGADPDAAEFLGVTPQTPLLSVERASFTYGDKPVEMR 245 P+Y FE+EFG RM+RA ERIRAV ADP AE L V ++PLLSVER S T+GDKPVE+R Sbjct: 183 PMYAFFEAEFGVRMLRATERIRAVAADPTTAELLSVAAESPLLSVERVSHTFGDKPVEIR 242 Query: 246 RGLYLTTNHHYQSELS 261 RGLY+TT H+YQ+EL+ Sbjct: 243 RGLYVTTRHYYQNELN 258 >Q8XXW6.1 Q8XXW6_RALSO Probable transcription regulator protein Length = 274 Score = 356 bits (913), Expect = 2e-96, Method: Compositional matrix adjust. Identities = 169/257 (65%), Positives = 207/257 (80%) Query: 5 LPNSNNADAHAAGAGVASPAPTFSPLYQQIKALIMQRLEAGEWKPGELIPSEVELGSRFK 64 +P S ++A A+ AGV + APTFSPLYQQIK LI+Q L+AGEWKPGE+IPSE+EL +R+K Sbjct: 18 VPPSPGSEAGASPAGVGAGAPTFSPLYQQIKTLILQSLQAGEWKPGEMIPSEMELAARYK 77 Query: 65 VSQGTVRKAIDELAAENLVVRRQGKGTFVATHHETQAQFRFLRLMADSDEPQRPENKIIE 124 VSQGTVRKAIDELAAENLV RRQGKGTFV TH+E QFRFLRLM + E P ++++E Sbjct: 78 VSQGTVRKAIDELAAENLVARRQGKGTFVTTHYEEGVQFRFLRLMPEQGEQHYPSSRVLE 137 Query: 125 VKRVRASAEVARQLDMKSGDSVIFIRRVKSFNGVPIILEDIWLPGAIFKGLTAERLVEYR 184 KR+RA AE+AR LD+K GDSV+ IRRV F+G P + E+IWLPG+ FKGLTAE+L +++ Sbjct: 138 CKRLRAPAEIARLLDLKPGDSVVQIRRVLFFSGEPTVFEEIWLPGSSFKGLTAEKLTDWK 197 Query: 185 GPLYGLFESEFGTRMIRAEERIRAVGADPDAAEFLGVTPQTPLLSVERASFTYGDKPVEM 244 GP+Y FE+EFG RM+RA ERIRAV AD A L V P +PLLSVER S T+GDKPVE+ Sbjct: 198 GPMYAFFEAEFGVRMLRATERIRAVAADAGTAGLLSVAPGSPLLSVERVSHTFGDKPVEL 257 Query: 245 RRGLYLTTNHHYQSELS 261 RRGLY+TT H+YQ+ELS Sbjct: 258 RRGLYVTTRHYYQNELS 274 >A3RVQ5.1 A3RVQ5_RALSO Transcriptional regulator, GntR family Length = 274 Score = 355 bits (910), Expect = 5e-96, Method: Compositional matrix adjust. Identities = 171/266 (64%), Positives = 206/266 (77%), Gaps = 6/266 (2%) Query: 2 SSILPNSNNADAHAAGAGVASP------APTFSPLYQQIKALIMQRLEAGEWKPGELIPS 55 S+ +PNS A G ASP APTFSPLYQQIK LI+Q L+AGEWKPGE+IPS Sbjct: 9 SASIPNSTAAPPSPGGEAGASPVGAGAGAPTFSPLYQQIKTLILQSLQAGEWKPGEMIPS 68 Query: 56 EVELGSRFKVSQGTVRKAIDELAAENLVVRRQGKGTFVATHHETQAQFRFLRLMADSDEP 115 E+EL +R+KVSQGTVRKAIDELAAENLV RRQGKGTFV TH+E QFRFLRLM + E Sbjct: 69 EMELAARYKVSQGTVRKAIDELAAENLVARRQGKGTFVTTHYEEGVQFRFLRLMPEQGEQ 128 Query: 116 QRPENKIIEVKRVRASAEVARQLDMKSGDSVIFIRRVKSFNGVPIILEDIWLPGAIFKGL 175 P ++++E KR+RA AE+AR LD+K GDSV+ IRRV F+G P + E+IWLPG+ FKGL Sbjct: 129 HYPSSRVLECKRLRAPAEIARLLDLKPGDSVVQIRRVLFFSGEPTVFEEIWLPGSSFKGL 188 Query: 176 TAERLVEYRGPLYGLFESEFGTRMIRAEERIRAVGADPDAAEFLGVTPQTPLLSVERASF 235 TAE+L +++GP+Y FE+EFG RM+RA ERIRAV AD AE L V P +PLLSVER S Sbjct: 189 TAEKLTDWKGPMYAFFETEFGVRMLRATERIRAVAADAGTAELLSVIPGSPLLSVERVSH 248 Query: 236 TYGDKPVEMRRGLYLTTNHHYQSELS 261 T+GDKPVE+RRGLY+T H+YQ+ELS Sbjct: 249 TFGDKPVELRRGLYVTARHYYQNELS 274 >B5SIR6.1 B5SIR6_RALSO Transcription regulator protein Length = 268 Score = 354 bits (908), Expect = 8e-96, Method: Compositional matrix adjust. Identities = 171/266 (64%), Positives = 206/266 (77%), Gaps = 6/266 (2%) Query: 2 SSILPNSNNADAHAAGAGVASP------APTFSPLYQQIKALIMQRLEAGEWKPGELIPS 55 S+ +PNS A G ASP APTFSPLYQQIK LI+Q L+AGEWKPGE+IPS Sbjct: 3 SASIPNSTAAPPSPGGEAGASPVGAGAGAPTFSPLYQQIKTLILQSLQAGEWKPGEMIPS 62 Query: 56 EVELGSRFKVSQGTVRKAIDELAAENLVVRRQGKGTFVATHHETQAQFRFLRLMADSDEP 115 E+EL +R+KVSQGTVRKAIDELAAENLV RRQGKGTFV TH+E QFRFLRLM + E Sbjct: 63 EMELAARYKVSQGTVRKAIDELAAENLVARRQGKGTFVTTHYEEGVQFRFLRLMPEQGEQ 122 Query: 116 QRPENKIIEVKRVRASAEVARQLDMKSGDSVIFIRRVKSFNGVPIILEDIWLPGAIFKGL 175 P ++++E KR+RA AE+AR LD+K GDSV+ IRRV F+G P + E+IWLPG+ FKGL Sbjct: 123 HYPSSRVLECKRLRAPAEIARLLDLKPGDSVVQIRRVLFFSGEPTVFEEIWLPGSSFKGL 182 Query: 176 TAERLVEYRGPLYGLFESEFGTRMIRAEERIRAVGADPDAAEFLGVTPQTPLLSVERASF 235 TAE+L +++GP+Y FE+EFG RM+RA ERIRAV AD AE L V P +PLLSVER S Sbjct: 183 TAEKLTDWKGPMYAFFETEFGVRMLRATERIRAVAADAGTAELLSVIPGSPLLSVERVSH 242 Query: 236 TYGDKPVEMRRGLYLTTNHHYQSELS 261 T+GDKPVE+RRGLY+T H+YQ+ELS Sbjct: 243 TFGDKPVELRRGLYVTARHYYQNELS 268