BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0035.0162.p (112 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value D8IZX2.1 D8IZX2_HERSS Succinate dehydrogenase, hydrophobic subun... 220 5e-56 F1VWI2.1 F1VWI2_9BURK Succinate dehydrogenase cytochrome b-556 s... 171 5e-41 A4G5Z7.1 A4G5Z7_HERAR Succinate dehydrogenase cytochrome b556 su... 136 9e-31 A6SY49.1 A6SY49_JANMA Succinate dehydrogenase cytochrome b-556 s... 131 4e-29 B1FUX6.1 B1FUX6_9BURK Succinate dehydrogenase, cytochrome b556 s... 127 8e-28 D0J3E2.1 D0J3E2_COMT2 Succinate dehydrogenase, cytochrome b subunit 126 1e-27 D8D3B2.1 D8D3B2_COMTE Succinate dehydrogenase, cytochrome b556 s... 126 1e-27 B1FVH3.1 B1FVH3_9BURK Succinate dehydrogenase, cytochrome b556 s... 126 1e-27 C6BJI6.1 C6BJI6_RALP1 Succinate dehydrogenase, cytochrome b556 s... 125 1e-27 E2T180.1 E2T180_9RALS Succinate dehydrogenase, cytochrome b556 s... 125 1e-27 >D8IZX2.1 D8IZX2_HERSS Succinate dehydrogenase, hydrophobic subunit, cytochrome b556 with SdhD protein Length = 136 Score = 220 bits (561), Expect = 5e-56, Method: Compositional matrix adjust. Identities = 112/112 (100%), Positives = 112/112 (100%) Query: 1 MPLAAIVSIMHRISGLFLFLMLPFILYLLDSSLLSEGTFDYLKGFTSGWFVKLVILALSW 60 MPLAAIVSIMHRISGLFLFLMLPFILYLLDSSLLSEGTFDYLKGFTSGWFVKLVILALSW Sbjct: 25 MPLAAIVSIMHRISGLFLFLMLPFILYLLDSSLLSEGTFDYLKGFTSGWFVKLVILALSW 84 Query: 61 AYLHHFCAGIRHLIMDNHIGLDKDSARKSSATVLVISIALMVLVALKLFGAF 112 AYLHHFCAGIRHLIMDNHIGLDKDSARKSSATVLVISIALMVLVALKLFGAF Sbjct: 85 AYLHHFCAGIRHLIMDNHIGLDKDSARKSSATVLVISIALMVLVALKLFGAF 136 >F1VWI2.1 F1VWI2_9BURK Succinate dehydrogenase cytochrome b-556 subunit Length = 136 Score = 171 bits (432), Expect = 5e-41, Method: Compositional matrix adjust. Identities = 80/112 (71%), Positives = 95/112 (84%) Query: 1 MPLAAIVSIMHRISGLFLFLMLPFILYLLDSSLLSEGTFDYLKGFTSGWFVKLVILALSW 60 +PLA ++SI+HRISG +F +LP ILYLLD SLLSEGTF+Y KG TS WFVKLV+LA+SW Sbjct: 25 LPLAGLISILHRISGFLMFALLPVILYLLDQSLLSEGTFEYFKGITSNWFVKLVLLAVSW 84 Query: 61 AYLHHFCAGIRHLIMDNHIGLDKDSARKSSATVLVISIALMVLVALKLFGAF 112 A+LHHFCAGIRHL MDNHIG++KDSARKS+ V +S+ L LVALKLFGAF Sbjct: 85 AFLHHFCAGIRHLFMDNHIGIEKDSARKSAVIVFAVSLPLAGLVALKLFGAF 136 >A4G5Z7.1 A4G5Z7_HERAR Succinate dehydrogenase cytochrome b556 subunit (Cytochrome b-556) Length = 136 Score = 136 bits (343), Expect = 9e-31, Method: Compositional matrix adjust. Identities = 78/112 (69%), Positives = 89/112 (79%) Query: 1 MPLAAIVSIMHRISGLFLFLMLPFILYLLDSSLLSEGTFDYLKGFTSGWFVKLVILALSW 60 MPLAAIVSIMHRISG +FL+LP IL LLD SL+SE +F++ KG S WFVKL+ILAL W Sbjct: 25 MPLAAIVSIMHRISGALIFLLLPVILLLLDKSLMSEISFEHFKGIASHWFVKLIILALVW 84 Query: 61 AYLHHFCAGIRHLIMDNHIGLDKDSARKSSATVLVISIALMVLVALKLFGAF 112 AYLHHFCAGIRHL D H+G+DK RKS+ VL IS+ L LVALKLFGAF Sbjct: 85 AYLHHFCAGIRHLFADVHVGVDKVKGRKSAVIVLAISLPLTALVALKLFGAF 136 >A6SY49.1 A6SY49_JANMA Succinate dehydrogenase cytochrome b-556 subunit EC=1.3.99.1 Length = 136 Score = 131 bits (329), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 74/111 (66%), Positives = 91/111 (81%) Query: 2 PLAAIVSIMHRISGLFLFLMLPFILYLLDSSLLSEGTFDYLKGFTSGWFVKLVILALSWA 61 PLAAI SI+HR SG +FL+LPFIL+LLD SLLSE +F++ KG S WF+KL+ILAL+WA Sbjct: 26 PLAAIQSILHRASGALIFLLLPFILFLLDKSLLSEISFEHFKGIASHWFIKLIILALAWA 85 Query: 62 YLHHFCAGIRHLIMDNHIGLDKDSARKSSATVLVISIALMVLVALKLFGAF 112 YLHHFCAGIRHL+MD H+G+DK + +KS+ V IS+ L LVALKLFGAF Sbjct: 86 YLHHFCAGIRHLLMDVHVGVDKVAGKKSATIVFAISLPLTALVALKLFGAF 136 >B1FUX6.1 B1FUX6_9BURK Succinate dehydrogenase, cytochrome b556 subunit Length = 138 Score = 127 bits (318), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 63/113 (55%), Positives = 82/113 (72%), Gaps = 1/113 (0%) Query: 1 MPLAAIVSIMHRISGLFLFLMLPFILYLLDSSLLSEGTFDYLKGFTSGWFVKLVILALSW 60 +PLA VSI+HR+SG LF+ LPF+LYL D SL SE +F+ KGF S VKL+ L L+W Sbjct: 26 LPLAGRVSILHRLSGGLLFVALPFLLYLFDQSLTSELSFEVFKGFLSNLIVKLITLVLAW 85 Query: 61 AYLHHFCAGIRHLIMD-NHIGLDKDSARKSSATVLVISIALMVLVALKLFGAF 112 AYL HFCAG+RHL+MD NH + K+ +++S V V+S L ++ ALKLFGAF Sbjct: 86 AYLFHFCAGVRHLLMDTNHEAVTKEKGKQTSIVVFVVSSLLTIVFALKLFGAF 138 >D0J3E2.1 D0J3E2_COMT2 Succinate dehydrogenase, cytochrome b subunit Length = 141 Score = 126 bits (317), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 64/119 (53%), Positives = 88/119 (73%), Gaps = 10/119 (8%) Query: 1 MPLAAIVSIMHRISGLFLFLMLPFILYLLDSSLLSEGTFDYLKGFTS------GWFVKLV 54 +PLA IVSI+HR+SGL + ++LPFI+++ D+S+ SE +FD FTS GWF KLV Sbjct: 26 LPLAGIVSILHRVSGLLMAILLPFIIWMFDNSISSEISFD---SFTSVFAGPFGWFAKLV 82 Query: 55 ILALSWAYLHHFCAGIRHLIMD-NHIGLDKDSARKSSATVLVISIALMVLVALKLFGAF 112 LAL WAYLHHFCAG+RHL+MD NH ++K + + ++A VL IS+AL V++ KLFG + Sbjct: 83 CLALIWAYLHHFCAGVRHLVMDVNHHAVNKQTGKSTAAVVLCISVALTVVLGAKLFGLY 141 >D8D3B2.1 D8D3B2_COMTE Succinate dehydrogenase, cytochrome b556 subunit Length = 141 Score = 126 bits (317), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 64/119 (53%), Positives = 88/119 (73%), Gaps = 10/119 (8%) Query: 1 MPLAAIVSIMHRISGLFLFLMLPFILYLLDSSLLSEGTFDYLKGFTS------GWFVKLV 54 +PLA IVSI+HR+SGL + ++LPFI+++ D+S+ SE +FD FTS GWF KLV Sbjct: 26 LPLAGIVSILHRVSGLLMAILLPFIIWMFDNSISSEISFD---SFTSVFAGPFGWFAKLV 82 Query: 55 ILALSWAYLHHFCAGIRHLIMD-NHIGLDKDSARKSSATVLVISIALMVLVALKLFGAF 112 LAL WAYLHHFCAG+RHL+MD NH ++K + + ++A VL IS+AL V++ KLFG + Sbjct: 83 CLALIWAYLHHFCAGVRHLVMDVNHHAVNKQTGKSTAAVVLCISVALTVVLGAKLFGLY 141 >B1FVH3.1 B1FVH3_9BURK Succinate dehydrogenase, cytochrome b556 subunit Length = 138 Score = 126 bits (316), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 63/113 (55%), Positives = 82/113 (72%), Gaps = 1/113 (0%) Query: 1 MPLAAIVSIMHRISGLFLFLMLPFILYLLDSSLLSEGTFDYLKGFTSGWFVKLVILALSW 60 +PLA VSI+HR+SG LF+ LPF+LYL D SL SE +F+ KGF S VKL+ L L+W Sbjct: 26 LPLAGRVSILHRLSGGLLFVALPFLLYLFDQSLTSELSFEVFKGFLSNIIVKLITLVLAW 85 Query: 61 AYLHHFCAGIRHLIMD-NHIGLDKDSARKSSATVLVISIALMVLVALKLFGAF 112 AYL HFCAG+RHL+MD NH + K+ +++S V V+S L ++ ALKLFGAF Sbjct: 86 AYLFHFCAGVRHLLMDTNHEAVTKEKGKQTSIVVFVVSSLLTIVFALKLFGAF 138 >C6BJI6.1 C6BJI6_RALP1 Succinate dehydrogenase, cytochrome b556 subunit Length = 136 Score = 125 bits (315), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 63/112 (56%), Positives = 81/112 (72%) Query: 1 MPLAAIVSIMHRISGLFLFLMLPFILYLLDSSLLSEGTFDYLKGFTSGWFVKLVILALSW 60 +P A VSI+HR SG +FL+LPF+LYL + SL SE +F S F K+V+LAL W Sbjct: 25 LPWAGKVSILHRASGALMFLLLPFVLYLFEQSLTSEISFAKFTALLSNGFAKVVVLALIW 84 Query: 61 AYLHHFCAGIRHLIMDNHIGLDKDSARKSSATVLVISIALMVLVALKLFGAF 112 AYLHHFCAGIR+LI+D HIG+DK SA KS+ +VL++S+ L V+ KLFG F Sbjct: 85 AYLHHFCAGIRYLILDLHIGIDKTSASKSAVSVLIVSLLLTVVFGAKLFGLF 136 >E2T180.1 E2T180_9RALS Succinate dehydrogenase, cytochrome b556 subunit Length = 136 Score = 125 bits (315), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 63/112 (56%), Positives = 81/112 (72%) Query: 1 MPLAAIVSIMHRISGLFLFLMLPFILYLLDSSLLSEGTFDYLKGFTSGWFVKLVILALSW 60 +P A VSI+HR SG +FL+LPF+LYL + SL SE +F S F K+V+LAL W Sbjct: 25 LPWAGKVSILHRASGALMFLLLPFVLYLFEQSLTSEISFAKFTALLSNGFAKVVVLALIW 84 Query: 61 AYLHHFCAGIRHLIMDNHIGLDKDSARKSSATVLVISIALMVLVALKLFGAF 112 AYLHHFCAGIR+LI+D HIG+DK SA KS+ +VL++S+ L V+ KLFG F Sbjct: 85 AYLHHFCAGIRYLILDLHIGIDKTSASKSAVSVLIVSLLLTVVFGAKLFGLF 136