BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0035.0096.p (120 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value D8IZQ0.1 D8IZQ0_HERSS Nitrite reductase NADPH (Small subunit) ox... 247 4e-64 Q8XQK3.1 Q8XQK3_RALSO Probable nitrite reductase nadph (Small su... 167 3e-40 D8NEB3.1 D8NEB3_RALSO Nitrite reductase (NAD(P)H)nirD EC=1.7.1.4 166 1e-39 B5SDM7.1 B5SDM7_RALSO Nitrite reductase nadph (Small subunit) pr... 165 2e-39 A3RXN9.1 A3RXN9_RALSO Putative uncharacterized protein 165 2e-39 B5S5U9.1 B5S5U9_RALSO Nitrite reductase nadph (Small subunit) pr... 164 3e-39 D8N1R7.1 D8N1R7_RALSO Nitrite reductase (NAD(P)H)nirD EC=1.7.1.4 163 7e-39 D8P5E5.1 D8P5E5_RALSO Nitrite reductase (NAD(P)H)nirD EC=1.7.1.4 162 2e-38 C6BN62.1 C6BN62_RALP1 Nitrite reductase (NAD(P)H), small subunit 157 4e-37 B2UI63.1 B2UI63_RALPJ Nitrite reductase (NAD(P)H), small subunit 157 4e-37 >D8IZQ0.1 D8IZQ0_HERSS Nitrite reductase NADPH (Small subunit) oxidoreductase protein EC=1.7.1.4 Length = 120 Score = 247 bits (631), Expect = 4e-64, Method: Compositional matrix adjust. Identities = 119/120 (99%), Positives = 120/120 (100%) Query: 1 MHSDQQIKHWTPVCDLGEIVPNTGVAALVGDQQVAVFHVIDRSQGEPQPRVFAVGNYDPN 60 MHSDQQIKHWTPVC+LGEIVPNTGVAALVGDQQVAVFHVIDRSQGEPQPRVFAVGNYDPN Sbjct: 1 MHSDQQIKHWTPVCELGEIVPNTGVAALVGDQQVAVFHVIDRSQGEPQPRVFAVGNYDPN 60 Query: 61 CDAAVLSRGLVGNLGERIVVASPIYKHHFDLTTGECLEEPANSIPAWPARIADGKVWIGA 120 CDAAVLSRGLVGNLGERIVVASPIYKHHFDLTTGECLEEPANSIPAWPARIADGKVWIGA Sbjct: 61 CDAAVLSRGLVGNLGERIVVASPIYKHHFDLTTGECLEEPANSIPAWPARIADGKVWIGA 120 >Q8XQK3.1 Q8XQK3_RALSO Probable nitrite reductase nadph (Small subunit) oxidoreductase protein EC=1.7.1.4 Length = 113 Score = 167 bits (424), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 81/114 (71%), Positives = 91/114 (79%), Gaps = 4/114 (3%) Query: 5 QQIKHWTPVCDLGEIVPNTGVAALVGDQQVAVFHVIDRSQGEPQPRVFAVGNYDPNCDAA 64 Q HWT +C L +IVPNTGV ALVG Q+AVFHV G+ RV+A+GNYDPN DAA Sbjct: 1 MQANHWTAICALDDIVPNTGVCALVGGAQIAVFHV----AGDAPRRVYAIGNYDPNADAA 56 Query: 65 VLSRGLVGNLGERIVVASPIYKHHFDLTTGECLEEPANSIPAWPARIADGKVWI 118 VLSRGLVGNLGERIVVASPIYK HFDL TGECLE PANS+PA+ A++ DGKVWI Sbjct: 57 VLSRGLVGNLGERIVVASPIYKQHFDLATGECLEAPANSVPAYAAKVEDGKVWI 110 >D8NEB3.1 D8NEB3_RALSO Nitrite reductase (NAD(P)H)nirD EC=1.7.1.4 Length = 113 Score = 166 bits (420), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 81/114 (71%), Positives = 90/114 (78%), Gaps = 4/114 (3%) Query: 5 QQIKHWTPVCDLGEIVPNTGVAALVGDQQVAVFHVIDRSQGEPQPRVFAVGNYDPNCDAA 64 Q HWT +C L +IVPNTGV ALVG Q+AVFHV G RV+A+GNYDPN DAA Sbjct: 1 MQANHWTAICALDDIVPNTGVCALVGGAQIAVFHV----AGVAPRRVYAIGNYDPNSDAA 56 Query: 65 VLSRGLVGNLGERIVVASPIYKHHFDLTTGECLEEPANSIPAWPARIADGKVWI 118 VLSRGLVGNLGERIVVASPIYK HFDL TGECLE PANS+PA+ A++ DGKVWI Sbjct: 57 VLSRGLVGNLGERIVVASPIYKQHFDLATGECLEAPANSVPAYAAKVEDGKVWI 110 >B5SDM7.1 B5SDM7_RALSO Nitrite reductase nadph (Small subunit) protein EC=1.7.1.4 Length = 113 Score = 165 bits (418), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 80/113 (70%), Positives = 92/113 (81%), Gaps = 4/113 (3%) Query: 6 QIKHWTPVCDLGEIVPNTGVAALVGDQQVAVFHVIDRSQGEPQPRVFAVGNYDPNCDAAV 65 Q HWT VC L +IVPNTGV ALVG +QVAVFHV G+ RV+A+GNYDPN +AAV Sbjct: 2 QTNHWTAVCALDDIVPNTGVCALVGGEQVAVFHV----AGQAPHRVYAIGNYDPNSEAAV 57 Query: 66 LSRGLVGNLGERIVVASPIYKHHFDLTTGECLEEPANSIPAWPARIADGKVWI 118 LSRGLVGNLGERIVVASPIYK HFDL TGECLE PA+S+PA+ A++ DGKVW+ Sbjct: 58 LSRGLVGNLGERIVVASPIYKQHFDLATGECLEAPASSVPAYAAKVEDGKVWV 110 >A3RXN9.1 A3RXN9_RALSO Putative uncharacterized protein Length = 113 Score = 165 bits (418), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 80/113 (70%), Positives = 92/113 (81%), Gaps = 4/113 (3%) Query: 6 QIKHWTPVCDLGEIVPNTGVAALVGDQQVAVFHVIDRSQGEPQPRVFAVGNYDPNCDAAV 65 Q HWT VC L +IVPNTGV ALVG +QVAVFHV G+ RV+A+GNYDPN +AAV Sbjct: 2 QTNHWTAVCALDDIVPNTGVCALVGGEQVAVFHV----AGQAPHRVYAIGNYDPNSEAAV 57 Query: 66 LSRGLVGNLGERIVVASPIYKHHFDLTTGECLEEPANSIPAWPARIADGKVWI 118 LSRGLVGNLGERIVVASPIYK HFDL TGECLE PA+S+PA+ A++ DGKVW+ Sbjct: 58 LSRGLVGNLGERIVVASPIYKQHFDLATGECLEAPASSVPAYAAKVEDGKVWV 110 >B5S5U9.1 B5S5U9_RALSO Nitrite reductase nadph (Small subunit) protein EC=1.7.1.4 Length = 113 Score = 164 bits (416), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 80/114 (70%), Positives = 91/114 (79%), Gaps = 4/114 (3%) Query: 5 QQIKHWTPVCDLGEIVPNTGVAALVGDQQVAVFHVIDRSQGEPQPRVFAVGNYDPNCDAA 64 Q HWT VC L +IVPNTGV ALVG +QVAVFHV G RV+A+GNYDPN +AA Sbjct: 1 MQTNHWTAVCALDDIVPNTGVCALVGGEQVAVFHV----AGHAPHRVYAIGNYDPNSEAA 56 Query: 65 VLSRGLVGNLGERIVVASPIYKHHFDLTTGECLEEPANSIPAWPARIADGKVWI 118 VLSRGLVGNLGERIVVASPIYK HFDL TGECLE PA+S+PA+ A++ DGKVW+ Sbjct: 57 VLSRGLVGNLGERIVVASPIYKQHFDLATGECLEAPASSVPAYAAKVEDGKVWV 110 >D8N1R7.1 D8N1R7_RALSO Nitrite reductase (NAD(P)H)nirD EC=1.7.1.4 Length = 113 Score = 163 bits (413), Expect = 7e-39, Method: Compositional matrix adjust. Identities = 78/114 (68%), Positives = 91/114 (79%), Gaps = 4/114 (3%) Query: 5 QQIKHWTPVCDLGEIVPNTGVAALVGDQQVAVFHVIDRSQGEPQPRVFAVGNYDPNCDAA 64 Q HWT VC L +IVPNTGV AL+G +QVAVF R G+ RV+A+GNYDPN +AA Sbjct: 1 MQANHWTAVCTLDDIVPNTGVCALIGGEQVAVF----RVDGDAPRRVYAIGNYDPNSEAA 56 Query: 65 VLSRGLVGNLGERIVVASPIYKHHFDLTTGECLEEPANSIPAWPARIADGKVWI 118 VLSRGLVGNLGERIVVASPIYK HFDLTTGECLE PANS+PA+ ++ DG+VW+ Sbjct: 57 VLSRGLVGNLGERIVVASPIYKQHFDLTTGECLEAPANSVPAYATKVEDGRVWV 110 >D8P5E5.1 D8P5E5_RALSO Nitrite reductase (NAD(P)H)nirD EC=1.7.1.4 Length = 113 Score = 162 bits (409), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 79/113 (69%), Positives = 90/113 (79%), Gaps = 4/113 (3%) Query: 6 QIKHWTPVCDLGEIVPNTGVAALVGDQQVAVFHVIDRSQGEPQPRVFAVGNYDPNCDAAV 65 Q HWT VC L +IVPNTGV ALVG +QVAVFHV G RV+A+GNYDPN +AAV Sbjct: 2 QANHWTAVCALDDIVPNTGVCALVGGEQVAVFHV----AGHAPHRVYAIGNYDPNSEAAV 57 Query: 66 LSRGLVGNLGERIVVASPIYKHHFDLTTGECLEEPANSIPAWPARIADGKVWI 118 LSRGLVGNLGERIVVASPIYK HFDL TGECLE PA+S+ A+ A++ DGKVW+ Sbjct: 58 LSRGLVGNLGERIVVASPIYKQHFDLATGECLEAPASSVQAYAAKVEDGKVWV 110 >C6BN62.1 C6BN62_RALP1 Nitrite reductase (NAD(P)H), small subunit Length = 112 Score = 157 bits (398), Expect = 4e-37, Method: Compositional matrix adjust. Identities = 78/116 (67%), Positives = 87/116 (75%), Gaps = 4/116 (3%) Query: 5 QQIKHWTPVCDLGEIVPNTGVAALVGDQQVAVFHVIDRSQGEPQPRVFAVGNYDPNCDAA 64 Q WTP+C L +IVPNTGV ALV QVAVF R G V+A+GNYDPN DAA Sbjct: 1 MQASRWTPICALDDIVPNTGVCALVEGDQVAVF----RVGGNTTQGVYAIGNYDPNSDAA 56 Query: 65 VLSRGLVGNLGERIVVASPIYKHHFDLTTGECLEEPANSIPAWPARIADGKVWIGA 120 VLSRGLVGNLGERIVVASPIYK HFDLTTGECLE PANS+ A+ ++ DGKVW+ A Sbjct: 57 VLSRGLVGNLGERIVVASPIYKQHFDLTTGECLEAPANSVHAYATKVEDGKVWVAA 112 >B2UI63.1 B2UI63_RALPJ Nitrite reductase (NAD(P)H), small subunit Length = 112 Score = 157 bits (398), Expect = 4e-37, Method: Compositional matrix adjust. Identities = 78/116 (67%), Positives = 87/116 (75%), Gaps = 4/116 (3%) Query: 5 QQIKHWTPVCDLGEIVPNTGVAALVGDQQVAVFHVIDRSQGEPQPRVFAVGNYDPNCDAA 64 Q WTP+C L +IVPNTGV ALV QVAVF R G V+A+GNYDPN DAA Sbjct: 1 MQASRWTPICALDDIVPNTGVCALVEGDQVAVF----RVGGNTTQGVYAIGNYDPNSDAA 56 Query: 65 VLSRGLVGNLGERIVVASPIYKHHFDLTTGECLEEPANSIPAWPARIADGKVWIGA 120 VLSRGLVGNLGERIVVASPIYK HFDLTTGECLE PANS+ A+ ++ DGKVW+ A Sbjct: 57 VLSRGLVGNLGERIVVASPIYKQHFDLTTGECLEAPANSVHAYATKVEDGKVWVAA 112