BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0035.0074.p (258 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value D8IZN1.1 D8IZN1_HERSS Outer membrane channel lipoprotein 509 e-142 Q8XT25.1 Q8XT25_RALSO Probable typeIsecretion system, outer memb... 192 3e-47 B5S9J5.1 B5S9J5_RALSO TypeIsecretion system, outer membrane chan... 192 4e-47 B5SAB9.1 B5SAB9_RALSO TypeIsecretion system, outer membrane chan... 192 5e-47 D8P2G7.1 D8P2G7_RALSO Putative Outer membrane efflux protein 192 6e-47 A3RPC7.1 A3RPC7_RALSO Type I secretion outer membrane protein 191 6e-47 D8NG95.1 D8NG95_RALSO Putative Outer membrane efflux protein 190 2e-46 A1ARK3.1 A1ARK3_PELPD Outer membrane efflux protein 186 2e-45 D8MZ47.1 D8MZ47_RALSO Putative Outer membrane efflux protein 180 2e-43 B2AK88.1 B2AK88_CUPTR Outer membrane efflux protein 149 5e-34 >D8IZN1.1 D8IZN1_HERSS Outer membrane channel lipoprotein Length = 484 Score = 509 bits (1310), Expect = e-142, Method: Compositional matrix adjust. Identities = 256/258 (99%), Positives = 257/258 (99%) Query: 1 LQARTFLAKAELEQARASGQHKKAQAMLAAAMGLLREAQDVPVLTLVPEQEEYPDGLEQN 60 LQARTFLAKAELEQARASGQHKKAQAMLAAAMGLLREAQDVPVLTLVPEQEEYPDGLEQN Sbjct: 227 LQARTFLAKAELEQARASGQHKKAQAMLAAAMGLLREAQDVPVLTLVPEQEEYPDGLEQN 286 Query: 61 LPAWLQAARQYHPAILAARAQLEAAREKLQVARSEGMPTLDLSASQYANGRPNQAGNRGD 120 LPAWLQAARQYHPAILAARAQLEAAREKLQVARSEGMPTLDLSA QYANGRPNQAGNRGD Sbjct: 287 LPAWLQAARQYHPAILAARAQLEAAREKLQVARSEGMPTLDLSARQYANGRPNQAGNRGD 346 Query: 121 RERMVGLNLTVPIFEGFARDYKVGGAQAQIEAREAELQEVQTQVLGDIASTYAEAMTALN 180 RERMVGLNLTVPIFEGFARDYKVGGAQAQIEAREAELQEVQTQVLGDIASTYAEAMTALN Sbjct: 347 RERMVGLNLTVPIFEGFARDYKVGGAQAQIEAREAELQEVQTQVLGDIASTYAEAMTALN 406 Query: 181 SLSSSRRLLEAAQGAVDSVRRKYDAGAADIVEMLNAQTALSEADQERVKAMSDWRSARLR 240 SLSSSRRLL+AAQGAVDSVRRKYDAGAADIVEMLNAQTALSEADQERVKAMSDWRSARLR Sbjct: 407 SLSSSRRLLDAAQGAVDSVRRKYDAGAADIVEMLNAQTALSEADQERVKAMSDWRSARLR 466 Query: 241 LLANAGRMGRWAVAGNAR 258 LLANAGRMGRWAVAGNAR Sbjct: 467 LLANAGRMGRWAVAGNAR 484 >Q8XT25.1 Q8XT25_RALSO Probable typeIsecretion system, outer membrane chanel lipoprotein Length = 488 Score = 192 bits (489), Expect = 3e-47, Method: Compositional matrix adjust. Identities = 110/252 (43%), Positives = 162/252 (64%), Gaps = 7/252 (2%) Query: 1 LQARTFLAKAELEQARASGQHKKAQAMLAAAMGLLREAQDVPVLTLVPEQEEYPDGLEQN 60 LQART AKA+L + RA +KA + LA A+GL Q L + Sbjct: 233 LQARTAFAKAQLAEQRAVADFRKALSALAYALGL----QPGTAFQLAELNDATDSQSVGE 288 Query: 61 LPAWLQAARQYHPAILAARAQLEAAREKLQVARSEGMPTLDLSASQYANGRPNQAGNRGD 120 L WL A HP I +ARAQ +AA ++ R+EG+PT+DL+A+ Y NG PNQ G + Sbjct: 289 LARWLDEAAARHPGIASARAQWDAANARVAKTRAEGLPTIDLTANFYQNGYPNQ-GLQST 347 Query: 121 RERM--VGLNLTVPIFEGFARDYKVGGAQAQIEAREAELQEVQTQVLGDIASTYAEAMTA 178 R + VGL LT+P+FEGFAR YK+ GA+AQ E EA+ ++ + Q+L D+ +A+A+ A Sbjct: 348 RNNVSTVGLTLTIPLFEGFARTYKIRGAEAQAEQSEAQYEDTKNQILSDVIKVHADAVAA 407 Query: 179 LNSLSSSRRLLEAAQGAVDSVRRKYDAGAADIVEMLNAQTALSEADQERVKAMSDWRSAR 238 +++L +S L+ +AQ ++ S ++Y GAAD++E+L+ Q+AL +A QERV+ +S+WR+AR Sbjct: 408 VDNLRASDVLIRSAQASMVSSEKRYAKGAADVLELLSTQSALMDAMQERVRCLSEWRAAR 467 Query: 239 LRLLANAGRMGR 250 LRL+A AG +GR Sbjct: 468 LRLMATAGVLGR 479 >B5S9J5.1 B5S9J5_RALSO TypeIsecretion system, outer membrane chanel lipoprotein Length = 450 Score = 192 bits (488), Expect = 4e-47, Method: Compositional matrix adjust. Identities = 110/266 (41%), Positives = 168/266 (63%), Gaps = 21/266 (7%) Query: 1 LQARTFLAKAELEQARASGQHKKAQAMLAAAMGL-------LREAQDVPVLTLVPEQEEY 53 LQART AKA+L + RA+ +KA + L A+GL L E D V E Sbjct: 195 LQARTAFAKAQLAEQRATADFRKALSALGYALGLPPGTAFQLAELNDATDSQSVGE---- 250 Query: 54 PDGLEQNLPAWLQAARQYHPAILAARAQLEAAREKLQVARSEGMPTLDLSASQYANGRPN 113 L WL A HP I +ARAQ +AA+ ++ R+EG+PT+D +A+ Y NG PN Sbjct: 251 -------LARWLDEATARHPGIASARAQWDAAKARVDKTRAEGLPTVDFTANFYQNGYPN 303 Query: 114 QAGNRGDRERM--VGLNLTVPIFEGFARDYKVGGAQAQIEAREAELQEVQTQVLGDIAST 171 Q G + R + VG+ LT+P+FEGF+R YK+ GA+AQ E EA+ ++ + Q+L D+ Sbjct: 304 Q-GLQSTRNNVSTVGVTLTIPLFEGFSRTYKIRGAEAQAEQSEAQYEDTKNQILSDVIKV 362 Query: 172 YAEAMTALNSLSSSRRLLEAAQGAVDSVRRKYDAGAADIVEMLNAQTALSEADQERVKAM 231 +A+A+ A+++L +S L+ +AQ ++ S ++Y GAAD++E+L+ Q+AL++A QERV+ + Sbjct: 363 HADAVAAVDNLQASDVLIRSAQASMVSSEKRYAKGAADVLELLSTQSALTDAMQERVRCL 422 Query: 232 SDWRSARLRLLANAGRMGRWAVAGNA 257 S+WR+ARLRL+A AG +GR + G + Sbjct: 423 SEWRAARLRLMATAGVLGREHLDGTS 448 >B5SAB9.1 B5SAB9_RALSO TypeIsecretion system, outer membrane chanel lipoprotein Length = 488 Score = 192 bits (487), Expect = 5e-47, Method: Compositional matrix adjust. Identities = 109/259 (42%), Positives = 165/259 (63%), Gaps = 21/259 (8%) Query: 1 LQARTFLAKAELEQARASGQHKKAQAMLAAAMGL-------LREAQDVPVLTLVPEQEEY 53 LQART AKA+L + RA+ +KA + L A+GL L E D V E Sbjct: 233 LQARTAFAKAQLAEQRATADFRKALSALGYALGLPPGTAFQLAELNDATDSQSVGE---- 288 Query: 54 PDGLEQNLPAWLQAARQYHPAILAARAQLEAAREKLQVARSEGMPTLDLSASQYANGRPN 113 L WL A HP I +ARAQ +AA+ ++ R+EG+PT+D +A+ Y NG PN Sbjct: 289 -------LARWLDEAAARHPGIASARAQWDAAKARVDKTRAEGLPTVDFTANFYQNGYPN 341 Query: 114 QAGNRGDRERM--VGLNLTVPIFEGFARDYKVGGAQAQIEAREAELQEVQTQVLGDIAST 171 Q G + R + VG+ LT+P+FEGF+R YK+ GA+AQ E EA+ ++ + Q+L D+ Sbjct: 342 Q-GLQSTRNNVSTVGVTLTIPLFEGFSRTYKIRGAEAQAEQSEAQYEDTKNQILSDVIKV 400 Query: 172 YAEAMTALNSLSSSRRLLEAAQGAVDSVRRKYDAGAADIVEMLNAQTALSEADQERVKAM 231 +A+A+ A+++L +S L+ +AQ ++ S ++Y GAAD++E+L+ Q+AL++A QERV+ + Sbjct: 401 HADAVAAVDNLQASDVLIHSAQASMVSSEKRYAKGAADVLELLSTQSALTDAMQERVRCL 460 Query: 232 SDWRSARLRLLANAGRMGR 250 S+WR+ARLRL+A AG +GR Sbjct: 461 SEWRAARLRLMATAGVLGR 479 >D8P2G7.1 D8P2G7_RALSO Putative Outer membrane efflux protein Length = 494 Score = 192 bits (487), Expect = 6e-47, Method: Compositional matrix adjust. Identities = 109/259 (42%), Positives = 165/259 (63%), Gaps = 21/259 (8%) Query: 1 LQARTFLAKAELEQARASGQHKKAQAMLAAAMGL-------LREAQDVPVLTLVPEQEEY 53 LQART AKA+L + RA+ +KA + L A+GL L E D V E Sbjct: 239 LQARTAFAKAQLAEQRATADFRKALSALGYALGLPAGATFQLAELNDATDSQSVGE---- 294 Query: 54 PDGLEQNLPAWLQAARQYHPAILAARAQLEAAREKLQVARSEGMPTLDLSASQYANGRPN 113 L WL A HP I +ARAQ +AA+ ++ R+EG+PT+D +A+ Y NG PN Sbjct: 295 -------LARWLDEAAARHPGIASARAQWDAAKARVDKTRAEGLPTVDFTANFYQNGYPN 347 Query: 114 QAGNRGDRERM--VGLNLTVPIFEGFARDYKVGGAQAQIEAREAELQEVQTQVLGDIAST 171 Q G + R + +GL LT+P+FEGF+R YK+ GA+AQ E EA+ ++ + Q+L D+ Sbjct: 348 Q-GLQSTRNNVSTIGLTLTIPLFEGFSRTYKIRGAEAQAEQSEAQYEDTKNQILSDVIKV 406 Query: 172 YAEAMTALNSLSSSRRLLEAAQGAVDSVRRKYDAGAADIVEMLNAQTALSEADQERVKAM 231 +A+A+ A+++L +S L+ +AQ ++ S ++Y GAAD++E+L+ Q+AL++A QERV+ + Sbjct: 407 HADAVAAVDNLQASDVLIRSAQASMVSSEKRYAKGAADVLELLSTQSALTDAMQERVRCL 466 Query: 232 SDWRSARLRLLANAGRMGR 250 S+WR+ARLRL+A AG +GR Sbjct: 467 SEWRAARLRLMATAGVLGR 485 >A3RPC7.1 A3RPC7_RALSO Type I secretion outer membrane protein Length = 494 Score = 191 bits (486), Expect = 6e-47, Method: Compositional matrix adjust. Identities = 109/259 (42%), Positives = 165/259 (63%), Gaps = 21/259 (8%) Query: 1 LQARTFLAKAELEQARASGQHKKAQAMLAAAMGL-------LREAQDVPVLTLVPEQEEY 53 LQART AKA+L + RA+ +KA + L A+GL L E D V E Sbjct: 239 LQARTAFAKAQLAEQRATADFRKALSALGYALGLPPGTAFQLAELNDATDSQSVGE---- 294 Query: 54 PDGLEQNLPAWLQAARQYHPAILAARAQLEAAREKLQVARSEGMPTLDLSASQYANGRPN 113 L WL A HP I +ARAQ +AA+ ++ R+EG+PT+D +A+ Y NG PN Sbjct: 295 -------LARWLDEAAARHPGIASARAQWDAAKARVDKTRAEGLPTVDFTANFYQNGYPN 347 Query: 114 QAGNRGDRERM--VGLNLTVPIFEGFARDYKVGGAQAQIEAREAELQEVQTQVLGDIAST 171 Q G + R + VG+ LT+P+FEGF+R YK+ GA+AQ E EA+ ++ + Q+L D+ Sbjct: 348 Q-GLQSTRNNVSTVGVTLTIPLFEGFSRTYKIRGAEAQAEQSEAQYEDTKNQILSDVIKV 406 Query: 172 YAEAMTALNSLSSSRRLLEAAQGAVDSVRRKYDAGAADIVEMLNAQTALSEADQERVKAM 231 +A+A+ A+++L +S L+ +AQ ++ S ++Y GAAD++E+L+ Q+AL++A QERV+ + Sbjct: 407 HADAVAAVDNLQASDVLIHSAQASMVSSEKRYAKGAADVLELLSTQSALTDAMQERVRCL 466 Query: 232 SDWRSARLRLLANAGRMGR 250 S+WR+ARLRL+A AG +GR Sbjct: 467 SEWRAARLRLMATAGVLGR 485 >D8NG95.1 D8NG95_RALSO Putative Outer membrane efflux protein Length = 464 Score = 190 bits (482), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 109/252 (43%), Positives = 162/252 (64%), Gaps = 7/252 (2%) Query: 1 LQARTFLAKAELEQARASGQHKKAQAMLAAAMGLLREAQDVPVLTLVPEQEEYPDGLEQN 60 LQART AKA+L + RA +KA + L A+GL R + L + G Sbjct: 209 LQARTAFAKAQLAEQRAVADFRKALSALTYALGL-RPGTAFQLAELNDATDSQSVG---E 264 Query: 61 LPAWLQAARQYHPAILAARAQLEAAREKLQVARSEGMPTLDLSASQYANGRPNQAGNRGD 120 L WL A HP I +ARAQ +AA ++ R+EG+PT+D +A+ Y NG PNQ G + Sbjct: 265 LARWLDEAAARHPGIASARAQWDAANARVAKTRAEGLPTIDFTANFYQNGYPNQ-GLQST 323 Query: 121 RERM--VGLNLTVPIFEGFARDYKVGGAQAQIEAREAELQEVQTQVLGDIASTYAEAMTA 178 R + VGL LT+P+FEGFAR YK+ GA+AQ E EA+ ++ + Q+L D+ +A+A+ A Sbjct: 324 RNNVSTVGLTLTIPLFEGFARTYKIRGAEAQAEQSEAQYEDTKNQILSDVIKVHADAVAA 383 Query: 179 LNSLSSSRRLLEAAQGAVDSVRRKYDAGAADIVEMLNAQTALSEADQERVKAMSDWRSAR 238 +++L +S L+ +AQ ++ S ++Y GAAD++E+L+ Q+AL +A QERV+ +S+WR+AR Sbjct: 384 VDNLRASDVLIRSAQASMVSSEKRYAKGAADVLELLSTQSALMDAMQERVRCLSEWRAAR 443 Query: 239 LRLLANAGRMGR 250 LRL+A AG +GR Sbjct: 444 LRLMATAGVLGR 455 >A1ARK3.1 A1ARK3_PELPD Outer membrane efflux protein Length = 495 Score = 186 bits (473), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 99/244 (40%), Positives = 157/244 (64%), Gaps = 13/244 (5%) Query: 13 EQARASGQHKKAQAMLAAAMGLLREAQDVPVLTLVPEQEEYPDGL-----EQNLPAWLQA 67 ++ RA G ++KA A+L +G +P T + +E + L WL+ Sbjct: 254 DRNRAQGAYQKAVAVLVYVLG-------IPTRTAIALPDELNGDFAESEESKTLDDWLKL 306 Query: 68 ARQYHPAILAARAQLEAAREKLQVARSEGMPTLDLSASQYANGRPNQAGNRGD-RERMVG 126 A + HP++LA RAQ E++ K+ RSEG+PT+D SA+ Y NG P Q +R D R +G Sbjct: 307 AAKTHPSLLAGRAQWESSVRKIAATRSEGLPTVDFSANYYQNGYPGQGLSRTDSRITTIG 366 Query: 127 LNLTVPIFEGFARDYKVGGAQAQIEAREAELQEVQTQVLGDIASTYAEAMTALNSLSSSR 186 L+LT P F+GF+R YK+ A+AQ E + AE+QE + L ++ +A+A ++L +L +S+ Sbjct: 367 LSLTFPFFDGFSRTYKIRNAEAQAEQQHAEVQETEQNTLMEVVKAHADAGSSLQNLQASK 426 Query: 187 RLLEAAQGAVDSVRRKYDAGAADIVEMLNAQTALSEADQERVKAMSDWRSARLRLLANAG 246 +LL+ A+ ++ +RKY+ GAADI+E+LN Q AL++A QER++++++WRSA+LRLLA G Sbjct: 427 KLLDIAEASLAVSQRKYEKGAADILEVLNTQAALADARQERIRSLAEWRSAKLRLLACVG 486 Query: 247 RMGR 250 +GR Sbjct: 487 VLGR 490 >D8MZ47.1 D8MZ47_RALSO Putative Outer membrane efflux protein Length = 494 Score = 180 bits (456), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 112/252 (44%), Positives = 163/252 (64%), Gaps = 7/252 (2%) Query: 1 LQARTFLAKAELEQARASGQHKKAQAMLAAAMGLLREAQDVPVLTLVPEQEEYPDGLEQN 60 LQART AKA+L + RA +KA + LA A+GL R + L + G Sbjct: 239 LQARTAFAKAQLAEQRAMADFRKALSALAYALGL-RPGTAFQLAELNDATDSQSVG---E 294 Query: 61 LPAWLQAARQYHPAILAARAQLEAAREKLQVARSEGMPTLDLSASQYANGRPNQAGNRGD 120 L WL A HP I AARAQ +AA ++ R+EG+PTLD +A+ Y NG PNQ G + Sbjct: 295 LARWLDEAAARHPGIAAARAQWDAANARVAKTRAEGLPTLDFTANFYQNGYPNQ-GLQST 353 Query: 121 RERM--VGLNLTVPIFEGFARDYKVGGAQAQIEAREAELQEVQTQVLGDIASTYAEAMTA 178 R + VG+ LT+P+FEGF+R YK+ GA+AQ E EA+ ++ + Q+L D+ +A+A+ A Sbjct: 354 RNNVSTVGVTLTIPLFEGFSRTYKIRGAEAQAEQSEAQYEDTKNQILSDVIKVHADAVAA 413 Query: 179 LNSLSSSRRLLEAAQGAVDSVRRKYDAGAADIVEMLNAQTALSEADQERVKAMSDWRSAR 238 +++L +S L+ +AQ A+ S ++Y GAAD++E+L+ Q+AL +A QERV+ +S+WRSAR Sbjct: 414 VDNLQASDVLIRSAQAAMVSSEKRYAKGAADVLELLSTQSALIDAMQERVRCLSEWRSAR 473 Query: 239 LRLLANAGRMGR 250 LRL+A AG +GR Sbjct: 474 LRLMATAGVLGR 485 >B2AK88.1 B2AK88_CUPTR Outer membrane efflux protein Length = 480 Score = 149 bits (375), Expect = 5e-34, Method: Compositional matrix adjust. Identities = 101/257 (39%), Positives = 153/257 (59%), Gaps = 12/257 (4%) Query: 1 LQARTFLAKAELEQARASGQHKKAQAMLAAAMGLLREAQDVPVLTL--VPEQEEYPDGLE 58 LQA+T +A L +A+A GQ + A LAA M L + DVP LTL V ++ Sbjct: 220 LQAQTAYTQAVLNRAKADGQWQTAVGTLAADMNL---SPDVP-LTLPGVGDEVRTDAQFT 275 Query: 59 QNLPAWLQAARQYHPAILAARAQLEAAREKLQVARSEGMPTLDLSASQYANGRPNQAG-- 116 Q + ++ ARQ HP+++AA AQ++AA ++ R+EGMP+L L + N +P G Sbjct: 276 QAVGELIEGARQAHPSVMAAEAQVDAAAARVDQTRAEGMPSLGLVSRYSLNNQPATLGLG 335 Query: 117 ----NRGDRERMVGLNLTVPIFEGFARDYKVGGAQAQIEAREAELQEVQTQVLGDIASTY 172 R+ VG+ LT+P+FEGF R Y++ AQAQ+E L + QV ++ S+Y Sbjct: 336 VPSFPATGRDWYVGIQLTIPLFEGFGRLYRIHQAQAQLEREHDGLDAARQQVGLEVWSSY 395 Query: 173 AEAMTALNSLSSSRRLLEAAQGAVDSVRRKYDAGAADIVEMLNAQTALSEADQERVKAMS 232 TA +S+ S LL+ AQ + ++ +Y AG +I+E+LNAQTAL+ A Q+RV+A++ Sbjct: 396 QAVRTATDSVKYSATLLDTAQQSFNAAEHRYQAGVGNILELLNAQTALANAKQQRVQALA 455 Query: 233 DWRSARLRLLANAGRMG 249 DW++ RLRL + GR+G Sbjct: 456 DWKATRLRLAGSLGRLG 472