BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0032.0003.p (144 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B9Z0L0.1 B9Z0L0_9NEIS Transcriptional regulator, Crp/Fnr family 235 2e-60 Q6X3J0.1 Q6X3J0_PSEAE Putative cAMP regulatory protein 227 4e-58 Q4K9C0.1 Q4K9C0_PSEF5 Transcriptional regulator-related protein 227 5e-58 A4SMS4.1 A4SMS4_AERS4 Transcriptional regulator, Crp/Fnr family 222 2e-56 E4R4N9.1 E4R4N9_PSEPB Crp/FNR family transcriptional regulator 219 1e-55 B1J7F2.1 B1J7F2_PSEPW Transcriptional regulator, Crp/Fnr family 216 7e-55 A4Y6C8.1 A4Y6C8_SHEPC Cyclic nucleotide-binding protein 216 1e-54 A1RK68.1 A1RK68_SHESW Cyclic nucleotide-binding protein 216 1e-54 D0KWV4.1 D0KWV4_HALNC Transcriptional regulator, Crp/Fnr family 215 2e-54 Q8EE39.1 Q8EE39_SHEON Transcriptional regulator-related protein 214 4e-54 >B9Z0L0.1 B9Z0L0_9NEIS Transcriptional regulator, Crp/Fnr family Length = 249 Score = 235 bits (599), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 110/138 (79%), Positives = 124/138 (89%) Query: 1 VQSGGSAYRLSASRFKEEFHRDTGTLHLMLRYSQALLTQMAQTAVCNRHHSIDQQLCRWL 60 VQS G A+RL+ RFK+E +R T L LMLRY+QAL+TQMAQTAVCNRHHSIDQQLCRWL Sbjct: 97 VQSAGHAFRLAGPRFKDEVNRHTELLQLMLRYTQALITQMAQTAVCNRHHSIDQQLCRWL 156 Query: 61 LLSLDRLSGNQVTMTQELIANMLGVRREGVTEAAGKLQRQGVIEYSRGRLTVLNRPRLEE 120 LLSLDRL NQ+TMTQELIANMLGVRREGVT+AAGKLQ+ GVIEYSRG +TVL+RP+LE+ Sbjct: 157 LLSLDRLPSNQLTMTQELIANMLGVRREGVTDAAGKLQKLGVIEYSRGHITVLDRPKLEQ 216 Query: 121 LCCECYAVVRKETQRLLP 138 LCCECYAVV+KET RLLP Sbjct: 217 LCCECYAVVKKETDRLLP 234 >Q6X3J0.1 Q6X3J0_PSEAE Putative cAMP regulatory protein Length = 239 Score = 227 bits (578), Expect = 4e-58, Method: Compositional matrix adjust. Identities = 109/143 (76%), Positives = 123/143 (86%), Gaps = 2/143 (1%) Query: 1 VQSGGSAYRLSASRFKEEFHRDTGTLHLMLRYSQALLTQMAQTAVCNRHHSIDQQLCRWL 60 VQS G AYRL + K+EF+R L LMLRY+QAL+TQMAQTAVCNRHHSIDQQLCRWL Sbjct: 97 VQSAGHAYRLPGQKLKDEFNRHGEMLQLMLRYTQALITQMAQTAVCNRHHSIDQQLCRWL 156 Query: 61 LLSLDRLSGNQVTMTQELIANMLGVRREGVTEAAGKLQRQGVIEYSRGRLTVLNRPRLEE 120 LLSLDRL NQ++MTQELIANMLGVRREGVTEAAGKLQ+ GVI+YSRG +TVL+RP+LE Sbjct: 157 LLSLDRLPSNQLSMTQELIANMLGVRREGVTEAAGKLQKLGVIKYSRGHITVLDRPQLEA 216 Query: 121 LCCECYAVVRKETQRLLP--PTR 141 LCCECYAVV++ET RLLP P R Sbjct: 217 LCCECYAVVKRETDRLLPYLPAR 239 >Q4K9C0.1 Q4K9C0_PSEF5 Transcriptional regulator-related protein Length = 245 Score = 227 bits (578), Expect = 5e-58, Method: Compositional matrix adjust. Identities = 109/138 (78%), Positives = 120/138 (86%) Query: 1 VQSGGSAYRLSASRFKEEFHRDTGTLHLMLRYSQALLTQMAQTAVCNRHHSIDQQLCRWL 60 VQS G A RL R K+EF+R L LMLRY+Q+L+TQMAQTAVCNRHHSIDQQLCRWL Sbjct: 97 VQSAGHALRLPGQRLKDEFNRHGEMLLLMLRYTQSLITQMAQTAVCNRHHSIDQQLCRWL 156 Query: 61 LLSLDRLSGNQVTMTQELIANMLGVRREGVTEAAGKLQRQGVIEYSRGRLTVLNRPRLEE 120 LLSLDRL GNQ+ MTQELIANMLGVRREGVTEAAGKLQRQG+IEYSRGR+ VL+RPRLE+ Sbjct: 157 LLSLDRLPGNQLVMTQELIANMLGVRREGVTEAAGKLQRQGIIEYSRGRINVLDRPRLEQ 216 Query: 121 LCCECYAVVRKETQRLLP 138 CECY VVRKET+RLLP Sbjct: 217 HSCECYGVVRKETERLLP 234 >A4SMS4.1 A4SMS4_AERS4 Transcriptional regulator, Crp/Fnr family Length = 256 Score = 222 bits (565), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 106/138 (76%), Positives = 119/138 (86%) Query: 1 VQSGGSAYRLSASRFKEEFHRDTGTLHLMLRYSQALLTQMAQTAVCNRHHSIDQQLCRWL 60 VQS G AYR+ K EF+ LHLMLRY+Q+LLTQMAQTAVCNRHHSIDQQLCRWL Sbjct: 97 VQSAGYAYRMKGQLLKTEFNVHGDLLHLMLRYTQSLLTQMAQTAVCNRHHSIDQQLCRWL 156 Query: 61 LLSLDRLSGNQVTMTQELIANMLGVRREGVTEAAGKLQRQGVIEYSRGRLTVLNRPRLEE 120 LLSLDRL NQ+TMTQELIANMLGVRREGVTEAAGKLQ+ GVIEY RG++TVL+RP+LE Sbjct: 157 LLSLDRLPSNQLTMTQELIANMLGVRREGVTEAAGKLQKLGVIEYRRGQITVLDRPKLER 216 Query: 121 LCCECYAVVRKETQRLLP 138 L CECY+VV+KET+RLLP Sbjct: 217 LSCECYSVVKKETERLLP 234 >E4R4N9.1 E4R4N9_PSEPB Crp/FNR family transcriptional regulator Length = 238 Score = 219 bits (558), Expect = 1e-55, Method: Compositional matrix adjust. Identities = 105/138 (76%), Positives = 120/138 (86%) Query: 1 VQSGGSAYRLSASRFKEEFHRDTGTLHLMLRYSQALLTQMAQTAVCNRHHSIDQQLCRWL 60 VQS G AYRL R K+EF+R + MLRY+QAL+TQMAQTAVCNRHHSIDQQLCRWL Sbjct: 97 VQSAGHAYRLPVQRLKDEFNRHGELMTFMLRYTQALITQMAQTAVCNRHHSIDQQLCRWL 156 Query: 61 LLSLDRLSGNQVTMTQELIANMLGVRREGVTEAAGKLQRQGVIEYSRGRLTVLNRPRLEE 120 LLSLDRL G+++ MTQELIANMLGVRREGVT+AAGKLQR GVIEY+RG++ VL+RPRLE Sbjct: 157 LLSLDRLPGDRLCMTQELIANMLGVRREGVTDAAGKLQRLGVIEYNRGQIRVLDRPRLEL 216 Query: 121 LCCECYAVVRKETQRLLP 138 L CECYAVV+KET+RLLP Sbjct: 217 LSCECYAVVKKETERLLP 234 >B1J7F2.1 B1J7F2_PSEPW Transcriptional regulator, Crp/Fnr family Length = 247 Score = 216 bits (551), Expect = 7e-55, Method: Compositional matrix adjust. Identities = 104/138 (75%), Positives = 119/138 (86%) Query: 1 VQSGGSAYRLSASRFKEEFHRDTGTLHLMLRYSQALLTQMAQTAVCNRHHSIDQQLCRWL 60 VQS G YRL + K+EF+R + LMLRY+QAL+TQMAQTAVCNRHHSIDQQLCRWL Sbjct: 101 VQSAGHGYRLPGQQLKDEFNRHGELMMLMLRYTQALITQMAQTAVCNRHHSIDQQLCRWL 160 Query: 61 LLSLDRLSGNQVTMTQELIANMLGVRREGVTEAAGKLQRQGVIEYSRGRLTVLNRPRLEE 120 LLSLDRL G+Q+ MTQELIANMLGVRREGVT+AAGKLQR GVIEY+RG + VL+R RLE+ Sbjct: 161 LLSLDRLPGDQLRMTQELIANMLGVRREGVTDAAGKLQRLGVIEYNRGHIRVLDRVRLEQ 220 Query: 121 LCCECYAVVRKETQRLLP 138 L CECYAVV+KET+RLLP Sbjct: 221 LSCECYAVVKKETERLLP 238 >A4Y6C8.1 A4Y6C8_SHEPC Cyclic nucleotide-binding protein Length = 255 Score = 216 bits (550), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 101/138 (73%), Positives = 118/138 (85%) Query: 1 VQSGGSAYRLSASRFKEEFHRDTGTLHLMLRYSQALLTQMAQTAVCNRHHSIDQQLCRWL 60 VQS G AYRL R K+EF+R LHL+LRYSQ LLTQMAQTAVCNRHHSI+QQLCRWL Sbjct: 111 VQSAGVAYRLFGQRLKDEFNRHGALLHLLLRYSQVLLTQMAQTAVCNRHHSIEQQLCRWL 170 Query: 61 LLSLDRLSGNQVTMTQELIANMLGVRREGVTEAAGKLQRQGVIEYSRGRLTVLNRPRLEE 120 LLS+DRLS ++V MTQELIANMLGVRREGVT+AAGKLQR G+I YSRG + VLNR LE+ Sbjct: 171 LLSIDRLSDDRVLMTQELIANMLGVRREGVTDAAGKLQRMGIINYSRGNIEVLNRKLLEQ 230 Query: 121 LCCECYAVVRKETQRLLP 138 CCECY+VV++E++RL+P Sbjct: 231 TCCECYSVVKQESERLMP 248 >A1RK68.1 A1RK68_SHESW Cyclic nucleotide-binding protein Length = 211 Score = 216 bits (549), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 101/138 (73%), Positives = 118/138 (85%) Query: 1 VQSGGSAYRLSASRFKEEFHRDTGTLHLMLRYSQALLTQMAQTAVCNRHHSIDQQLCRWL 60 VQS G AYRL R K+EF+R LHL+LRYSQ LLTQMAQTAVCNRHHSI+QQLCRWL Sbjct: 67 VQSAGVAYRLFGQRLKDEFNRHGALLHLLLRYSQVLLTQMAQTAVCNRHHSIEQQLCRWL 126 Query: 61 LLSLDRLSGNQVTMTQELIANMLGVRREGVTEAAGKLQRQGVIEYSRGRLTVLNRPRLEE 120 LLS+DRLS ++V MTQELIANMLGVRREGVT+AAGKLQR G+I YSRG + VLNR LE+ Sbjct: 127 LLSIDRLSDDRVLMTQELIANMLGVRREGVTDAAGKLQRMGIINYSRGNIEVLNRKLLEQ 186 Query: 121 LCCECYAVVRKETQRLLP 138 CCECY+VV++E++RL+P Sbjct: 187 TCCECYSVVKQESERLMP 204 >D0KWV4.1 D0KWV4_HALNC Transcriptional regulator, Crp/Fnr family Length = 254 Score = 215 bits (547), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 101/138 (73%), Positives = 116/138 (84%) Query: 1 VQSGGSAYRLSASRFKEEFHRDTGTLHLMLRYSQALLTQMAQTAVCNRHHSIDQQLCRWL 60 VQS G YRL + KEEFHR L L+LRY+Q+L TQMAQTAVCNRHHSI QQLCRWL Sbjct: 101 VQSAGFGYRLCGKKIKEEFHRHGDLLELVLRYTQSLFTQMAQTAVCNRHHSIVQQLCRWL 160 Query: 61 LLSLDRLSGNQVTMTQELIANMLGVRREGVTEAAGKLQRQGVIEYSRGRLTVLNRPRLEE 120 LLS+DRL+GN++ MTQELIANMLGVRREGVTEAAGKLQ+ G+IEY RG +T+LNR +LE+ Sbjct: 161 LLSMDRLNGNELVMTQELIANMLGVRREGVTEAAGKLQKLGIIEYQRGHITILNRKKLEQ 220 Query: 121 LCCECYAVVRKETQRLLP 138 CECYAVV+KET RLLP Sbjct: 221 QSCECYAVVKKETDRLLP 238 >Q8EE39.1 Q8EE39_SHEON Transcriptional regulator-related protein Length = 255 Score = 214 bits (544), Expect = 4e-54, Method: Compositional matrix adjust. Identities = 100/142 (70%), Positives = 119/142 (83%) Query: 1 VQSGGSAYRLSASRFKEEFHRDTGTLHLMLRYSQALLTQMAQTAVCNRHHSIDQQLCRWL 60 VQS G AYRL R K+EF+R LHL+LRYSQ LLTQMAQTAVCNRHHSI+QQLCRWL Sbjct: 111 VQSAGVAYRLFGQRLKDEFNRHGALLHLLLRYSQILLTQMAQTAVCNRHHSIEQQLCRWL 170 Query: 61 LLSLDRLSGNQVTMTQELIANMLGVRREGVTEAAGKLQRQGVIEYSRGRLTVLNRPRLEE 120 LLS+DRL ++V MTQELIANMLGVRREGVT+AAGKLQR G+I YSRG + VL+R LE+ Sbjct: 171 LLSIDRLPDDRVMMTQELIANMLGVRREGVTDAAGKLQRIGIINYSRGNIEVLDRKLLEQ 230 Query: 121 LCCECYAVVRKETQRLLPPTRF 142 CCECY+VV++E++RL+P +F Sbjct: 231 TCCECYSVVKQESERLMPLKKF 252