BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0031.0270.p (215 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value D8IUJ2.1 D8IUJ2_HERSS Transcription regulator protein 443 e-122 Q8XXJ6.1 Q8XXJ6_RALSO Probable transcription regulator protein 303 8e-81 B5S277.1 B5S277_RALSO Putative uncharacterized protein 302 2e-80 D8NS15.1 D8NS15_RALSO Putative transcriptional regulator, GntR f... 302 2e-80 B3R3S5.1 B3R3S5_CUPTR Putative TRANSCRIPTIONal REGULATOR, GntR f... 302 2e-80 Q1LQ06.1 Q1LQ06_RALME Transcriptional regulator, GntR-family 302 2e-80 D8N9Y5.1 D8N9Y5_RALSO Putative transcriptional regulator, GntR f... 302 2e-80 Q0KCX1.1 Q0KCX1_CUPNH Transcriptional regulator, GntR-family 302 3e-80 D8P1D0.1 D8P1D0_RALSO Putative transcriptional regulator, GntR f... 301 4e-80 B5SF49.1 B5SF49_RALSO Putative uncharacterized protein 301 5e-80 >D8IUJ2.1 D8IUJ2_HERSS Transcription regulator protein Length = 245 Score = 443 bits (1139), Expect = e-122, Method: Compositional matrix adjust. Identities = 215/215 (100%), Positives = 215/215 (100%) Query: 1 MYQDIYDAIMEHRLPPRTKLTEQTLCQIYDTARHTVRKVLARLAAEGMVDLEANRGAFIA 60 MYQDIYDAIMEHRLPPRTKLTEQTLCQIYDTARHTVRKVLARLAAEGMVDLEANRGAFIA Sbjct: 31 MYQDIYDAIMEHRLPPRTKLTEQTLCQIYDTARHTVRKVLARLAAEGMVDLEANRGAFIA 90 Query: 61 SPSPAEVRDMFELRNILEHAVLEKLGHTAGTRQIAGLRRMVEEERDCYLNGDRPRWIRLS 120 SPSPAEVRDMFELRNILEHAVLEKLGHTAGTRQIAGLRRMVEEERDCYLNGDRPRWIRLS Sbjct: 91 SPSPAEVRDMFELRNILEHAVLEKLGHTAGTRQIAGLRRMVEEERDCYLNGDRPRWIRLS 150 Query: 121 AQFHLALAELTGNALLVETLRKLVSRTTLMIAKTEAPGHNACSFDEHETVLEALEKGDIK 180 AQFHLALAELTGNALLVETLRKLVSRTTLMIAKTEAPGHNACSFDEHETVLEALEKGDIK Sbjct: 151 AQFHLALAELTGNALLVETLRKLVSRTTLMIAKTEAPGHNACSFDEHETVLEALEKGDIK 210 Query: 181 AAQAHMAHHLHLCEDRVRPDADDQFDLRAVLGKGL 215 AAQAHMAHHLHLCEDRVRPDADDQFDLRAVLGKGL Sbjct: 211 AAQAHMAHHLHLCEDRVRPDADDQFDLRAVLGKGL 245 >Q8XXJ6.1 Q8XXJ6_RALSO Probable transcription regulator protein Length = 250 Score = 303 bits (777), Expect = 8e-81, Method: Compositional matrix adjust. Identities = 148/215 (68%), Positives = 172/215 (80%), Gaps = 1/215 (0%) Query: 1 MYQDIYDAIMEHRLPPRTKLTEQTLCQIYDTARHTVRKVLARLAAEGMVDLEANRGAFIA 60 MY +IYDAIMEHRLPPRTKLTE LC+IY TARHTVRKV +RLAA+G+VDLE NRGAFIA Sbjct: 32 MYHEIYDAIMEHRLPPRTKLTEHALCEIYATARHTVRKVFSRLAADGLVDLEPNRGAFIA 91 Query: 61 SPSPAEVRDMFELRNILEHAVLEKLGHTAGTRQ-IAGLRRMVEEERDCYLNGDRPRWIRL 119 +PS E MFELR ILE AVL+K+G +A + +A L V EER +++ DRPRWIRL Sbjct: 92 APSIDEAHAMFELRQILERAVLDKVGRSASPKAAVAPLLARVNEERQAFVSHDRPRWIRL 151 Query: 120 SAQFHLALAELTGNALLVETLRKLVSRTTLMIAKTEAPGHNACSFDEHETVLEALEKGDI 179 SA+FH+ALAE GN L+VE +R+LVSRTTLMIA EAPGHNACSFDEH +L ALE+GD+ Sbjct: 152 SAEFHVALAEQAGNPLVVEIMRRLVSRTTLMIASVEAPGHNACSFDEHLDILRALERGDV 211 Query: 180 KAAQAHMAHHLHLCEDRVRPDADDQFDLRAVLGKG 214 AAQAHMA HL C DRVRP+A FDLRAVLG+G Sbjct: 212 GAAQAHMAQHLQCCADRVRPEAPADFDLRAVLGRG 246 >B5S277.1 B5S277_RALSO Putative uncharacterized protein Length = 252 Score = 302 bits (774), Expect = 2e-80, Method: Compositional matrix adjust. Identities = 147/215 (68%), Positives = 174/215 (80%), Gaps = 1/215 (0%) Query: 1 MYQDIYDAIMEHRLPPRTKLTEQTLCQIYDTARHTVRKVLARLAAEGMVDLEANRGAFIA 60 MY++IYDAIMEHRLPPRTKLTE LC+IY TARHTVRKV ++LAA+G+VDLE NRGAFIA Sbjct: 32 MYREIYDAIMEHRLPPRTKLTEHALCEIYATARHTVRKVFSQLAADGLVDLEPNRGAFIA 91 Query: 61 SPSPAEVRDMFELRNILEHAVLEKLGHTAGTRQ-IAGLRRMVEEERDCYLNGDRPRWIRL 119 +PS E MFELR ILE AVL+K+G +A + IA L+ +V+EER ++ DRPRWIRL Sbjct: 92 APSIDEAHAMFELRQILERAVLDKVGRSADPKTAIAPLQELVKEERQAFVGHDRPRWIRL 151 Query: 120 SAQFHLALAELTGNALLVETLRKLVSRTTLMIAKTEAPGHNACSFDEHETVLEALEKGDI 179 SA+FH+ALAE GN L+VE +R+LVSRTTLMIA EAPGHNACSFDEH +L ALE+GD Sbjct: 152 SAEFHVALAEQAGNPLVVEIMRRLVSRTTLMIASVEAPGHNACSFDEHLDILRALERGDA 211 Query: 180 KAAQAHMAHHLHLCEDRVRPDADDQFDLRAVLGKG 214 AAQAHMA HL C DRVRP+A FDLR+VLG+G Sbjct: 212 GAAQAHMAQHLQCCADRVRPEAPADFDLRSVLGRG 246 >D8NS15.1 D8NS15_RALSO Putative transcriptional regulator, GntR family Length = 252 Score = 302 bits (774), Expect = 2e-80, Method: Compositional matrix adjust. Identities = 147/215 (68%), Positives = 174/215 (80%), Gaps = 1/215 (0%) Query: 1 MYQDIYDAIMEHRLPPRTKLTEQTLCQIYDTARHTVRKVLARLAAEGMVDLEANRGAFIA 60 MY++IYDAIMEHRLPPRTKLTE LC+IY TARHTVRKV ++LAA+G+VDLE NRGAFIA Sbjct: 34 MYREIYDAIMEHRLPPRTKLTEHALCEIYATARHTVRKVFSQLAADGLVDLEPNRGAFIA 93 Query: 61 SPSPAEVRDMFELRNILEHAVLEKLGHTAGTRQ-IAGLRRMVEEERDCYLNGDRPRWIRL 119 +PS E MFELR ILE AVL+K+G +A + IA L+ +V+EER ++ DRPRWIRL Sbjct: 94 APSIDEAHAMFELRQILERAVLDKVGRSADPKTAIAPLQELVKEERQAFVGHDRPRWIRL 153 Query: 120 SAQFHLALAELTGNALLVETLRKLVSRTTLMIAKTEAPGHNACSFDEHETVLEALEKGDI 179 SA+FH+ALAE GN L+VE +R+LVSRTTLMIA EAPGHNACSFDEH +L ALE+GD Sbjct: 154 SAEFHVALAEQAGNPLVVEIMRRLVSRTTLMIASVEAPGHNACSFDEHLDILRALERGDA 213 Query: 180 KAAQAHMAHHLHLCEDRVRPDADDQFDLRAVLGKG 214 AAQAHMA HL C DRVRP+A FDLR+VLG+G Sbjct: 214 GAAQAHMAQHLQCCADRVRPEAPADFDLRSVLGRG 248 >B3R3S5.1 B3R3S5_CUPTR Putative TRANSCRIPTIONal REGULATOR, GntR family Length = 255 Score = 302 bits (774), Expect = 2e-80, Method: Compositional matrix adjust. Identities = 148/215 (68%), Positives = 172/215 (80%), Gaps = 1/215 (0%) Query: 1 MYQDIYDAIMEHRLPPRTKLTEQTLCQIYDTARHTVRKVLARLAAEGMVDLEANRGAFIA 60 MY +IYDAIMEHRLPPRTKLTE +LC+IY TARHTVRKVL+ LAA+GMVDLE NRGAFIA Sbjct: 40 MYHEIYDAIMEHRLPPRTKLTEHSLCEIYATARHTVRKVLSHLAADGMVDLEPNRGAFIA 99 Query: 61 SPSPAEVRDMFELRNILEHAVLEKLGHTAGTRQ-IAGLRRMVEEERDCYLNGDRPRWIRL 119 SPS E DMFELR +LE AVLEKL + IA LR+MV +ER +L DRP+WIRL Sbjct: 100 SPSTDEAHDMFELRQMLERAVLEKLAAMPDVKAVIAPLRQMVADERQAFLTHDRPKWIRL 159 Query: 120 SAQFHLALAELTGNALLVETLRKLVSRTTLMIAKTEAPGHNACSFDEHETVLEALEKGDI 179 SA+FH ALAEL+GNALLV +R+LVSRTTLMIA EAPG+NACSFDEHE +L+ALE+G+ Sbjct: 160 SAEFHTALAELSGNALLVNMMRRLVSRTTLMIASVEAPGNNACSFDEHEDILDALEQGNA 219 Query: 180 KAAQAHMAHHLHLCEDRVRPDADDQFDLRAVLGKG 214 AQ+ MAHHL C DRV+PD FDLR+VLG+ Sbjct: 220 ALAQSRMAHHLGACADRVQPDEPGSFDLRSVLGRS 254 >Q1LQ06.1 Q1LQ06_RALME Transcriptional regulator, GntR-family Length = 247 Score = 302 bits (774), Expect = 2e-80, Method: Compositional matrix adjust. Identities = 147/215 (68%), Positives = 171/215 (79%), Gaps = 1/215 (0%) Query: 1 MYQDIYDAIMEHRLPPRTKLTEQTLCQIYDTARHTVRKVLARLAAEGMVDLEANRGAFIA 60 MY +IYDAIMEHRLPPRTKLTE +LC+IY TARHTVRKVL+RLAA+GMVDLE NRGAFIA Sbjct: 32 MYHEIYDAIMEHRLPPRTKLTEHSLCEIYATARHTVRKVLSRLAADGMVDLEPNRGAFIA 91 Query: 61 SPSPAEVRDMFELRNILEHAVLEKLGHTAGTRQ-IAGLRRMVEEERDCYLNGDRPRWIRL 119 SPS E DMFELR +LE AVL+KL R IA LR+MV +ER +L +RPRWIRL Sbjct: 92 SPSTDEAHDMFELRQMLERAVLDKLASLPNVRTVIAPLRKMVNDERQAFLTHERPRWIRL 151 Query: 120 SAQFHLALAELTGNALLVETLRKLVSRTTLMIAKTEAPGHNACSFDEHETVLEALEKGDI 179 SA+FH ALAEL+GN LLV +R+LVSRTTLMIA E+PGHNACSFDEH+ +L+ALE+GD Sbjct: 152 SAEFHTALAELSGNQLLVTMMRRLVSRTTLMIASVESPGHNACSFDEHDEILDALEQGDA 211 Query: 180 KAAQAHMAHHLHLCEDRVRPDADDQFDLRAVLGKG 214 AQ MAHHL C +RV+PD FDLR+VLG+ Sbjct: 212 ALAQTRMAHHLGACAERVQPDEPGNFDLRSVLGRS 246 >D8N9Y5.1 D8N9Y5_RALSO Putative transcriptional regulator, GntR family Length = 250 Score = 302 bits (773), Expect = 2e-80, Method: Compositional matrix adjust. Identities = 148/215 (68%), Positives = 172/215 (80%), Gaps = 1/215 (0%) Query: 1 MYQDIYDAIMEHRLPPRTKLTEQTLCQIYDTARHTVRKVLARLAAEGMVDLEANRGAFIA 60 MY +IYDAIMEHRLPPRTKLTE LC+IY TARHTVRKV +RLAA+G+VDLE NRGAFIA Sbjct: 32 MYHEIYDAIMEHRLPPRTKLTEHALCEIYATARHTVRKVFSRLAADGLVDLEPNRGAFIA 91 Query: 61 SPSPAEVRDMFELRNILEHAVLEKLGHTAGTRQ-IAGLRRMVEEERDCYLNGDRPRWIRL 119 +PS E MFELR ILE AVL+K+G +A + +A L V EER +++ DRPRWIRL Sbjct: 92 APSIDEAHAMFELRQILERAVLDKVGRSASPQAAVAPLLVRVNEERQAFVSHDRPRWIRL 151 Query: 120 SAQFHLALAELTGNALLVETLRKLVSRTTLMIAKTEAPGHNACSFDEHETVLEALEKGDI 179 SA+FH+ALAE GN L+VE +R+LVSRTTLMIA EAPGHNACSFDEH +L ALE+GD+ Sbjct: 152 SAEFHVALAEQAGNPLVVEIMRRLVSRTTLMIASVEAPGHNACSFDEHLDILRALERGDV 211 Query: 180 KAAQAHMAHHLHLCEDRVRPDADDQFDLRAVLGKG 214 AAQAHMA HL C DRVRP+A FDLRAVLG+G Sbjct: 212 GAAQAHMAQHLQCCADRVRPEAPADFDLRAVLGRG 246 >Q0KCX1.1 Q0KCX1_CUPNH Transcriptional regulator, GntR-family Length = 256 Score = 302 bits (773), Expect = 3e-80, Method: Compositional matrix adjust. Identities = 148/215 (68%), Positives = 171/215 (79%), Gaps = 1/215 (0%) Query: 1 MYQDIYDAIMEHRLPPRTKLTEQTLCQIYDTARHTVRKVLARLAAEGMVDLEANRGAFIA 60 MY +IYDAIMEHRLPPRTKLTE +LC+IY TARHTVRKVL+ LAA+GMVDLE NRGAFIA Sbjct: 41 MYHEIYDAIMEHRLPPRTKLTEHSLCEIYATARHTVRKVLSHLAADGMVDLEPNRGAFIA 100 Query: 61 SPSPAEVRDMFELRNILEHAVLEKLGHTAGTRQ-IAGLRRMVEEERDCYLNGDRPRWIRL 119 SPS E DMFELR +LE AVLEKL + IA LR+MV ER +L DRP+WIRL Sbjct: 101 SPSTDEAHDMFELRQMLERAVLEKLAGMPDVKAVIAPLRQMVASERQAFLTHDRPKWIRL 160 Query: 120 SAQFHLALAELTGNALLVETLRKLVSRTTLMIAKTEAPGHNACSFDEHETVLEALEKGDI 179 SA+FH ALAEL+GNALLV +R+LVSRTTLMIA EAPG+NACSFDEHE +L+ALE+G+ Sbjct: 161 SAEFHTALAELSGNALLVNMMRRLVSRTTLMIASVEAPGNNACSFDEHEEILDALEQGNA 220 Query: 180 KAAQAHMAHHLHLCEDRVRPDADDQFDLRAVLGKG 214 AQ+ MAHHL C DRV+PD FDLR+VLG+ Sbjct: 221 ALAQSRMAHHLGACADRVQPDEPGNFDLRSVLGRS 255 >D8P1D0.1 D8P1D0_RALSO Putative transcriptional regulator, GntR family Length = 225 Score = 301 bits (772), Expect = 4e-80, Method: Compositional matrix adjust. Identities = 148/215 (68%), Positives = 173/215 (80%), Gaps = 1/215 (0%) Query: 1 MYQDIYDAIMEHRLPPRTKLTEQTLCQIYDTARHTVRKVLARLAAEGMVDLEANRGAFIA 60 MY++IYDAIMEHRLPPRTKLTE LC+IY TARHTVRKV A+LAA+G+VDLE NRGAFIA Sbjct: 7 MYREIYDAIMEHRLPPRTKLTEHALCEIYATARHTVRKVFAQLAADGLVDLEPNRGAFIA 66 Query: 61 SPSPAEVRDMFELRNILEHAVLEKLGHTAGTRQ-IAGLRRMVEEERDCYLNGDRPRWIRL 119 +PS E MFELR ILE AVL+K+G +A IA L +V+EER +++ DRPRWIRL Sbjct: 67 APSIDEAHAMFELRQILERAVLDKVGRSANPNTAIAPLLELVKEERQAFVSHDRPRWIRL 126 Query: 120 SAQFHLALAELTGNALLVETLRKLVSRTTLMIAKTEAPGHNACSFDEHETVLEALEKGDI 179 SA+FH+ALAE GN L+VE +R+LVSRTTLMIA EAPGHNACSFDEH +L ALE+GD Sbjct: 127 SAEFHVALAEQAGNPLVVEIMRRLVSRTTLMIASVEAPGHNACSFDEHLDILRALERGDA 186 Query: 180 KAAQAHMAHHLHLCEDRVRPDADDQFDLRAVLGKG 214 AAQAHMA HL C DRVRP+A FDLR+VLG+G Sbjct: 187 SAAQAHMAQHLQCCADRVRPEAPADFDLRSVLGRG 221 >B5SF49.1 B5SF49_RALSO Putative uncharacterized protein Length = 254 Score = 301 bits (770), Expect = 5e-80, Method: Compositional matrix adjust. Identities = 146/215 (67%), Positives = 173/215 (80%), Gaps = 1/215 (0%) Query: 1 MYQDIYDAIMEHRLPPRTKLTEQTLCQIYDTARHTVRKVLARLAAEGMVDLEANRGAFIA 60 MY++IYDAIMEHRLPPRTKLTE LC+IY TARHTVRKV ++LAA+G+VDLE NRGAFIA Sbjct: 34 MYREIYDAIMEHRLPPRTKLTEHALCEIYATARHTVRKVFSQLAADGLVDLEPNRGAFIA 93 Query: 61 SPSPAEVRDMFELRNILEHAVLEKLGHTAGTRQ-IAGLRRMVEEERDCYLNGDRPRWIRL 119 +PS E MFELR ILE AVL+K+G +A + IA L+ +V+EER ++ DRPRWIRL Sbjct: 94 APSIDEAHAMFELRQILERAVLDKVGRSADPKTAIAPLQELVKEERQAFVGHDRPRWIRL 153 Query: 120 SAQFHLALAELTGNALLVETLRKLVSRTTLMIAKTEAPGHNACSFDEHETVLEALEKGDI 179 SA+FH+ALAE GN L+VE +R+LVSRTTLMIA EAPGHNACSFDEH +L ALE+GD Sbjct: 154 SAEFHVALAEQAGNPLVVEIMRRLVSRTTLMIASVEAPGHNACSFDEHLDILRALERGDA 213 Query: 180 KAAQAHMAHHLHLCEDRVRPDADDQFDLRAVLGKG 214 AAQAHMA HL C DRVRP+A FDLR+ LG+G Sbjct: 214 GAAQAHMAQHLQCCADRVRPEAPADFDLRSALGRG 248