BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0031.0267.p         (53 letters)

Database: pfamseq 
           15,929,002 sequences; 5,169,768,107 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

B1G6L8.1 B1G6L8_9BURK Integrase catalytic region                      102   3e-20
B1G9T2.1 B1G9T2_9BURK Integrase catalytic region                       97   1e-18
B2T5P8.1 B2T5P8_BURPP Integrase catalytic region                       97   1e-18
Q9XAT9.1 Q9XAT9_9BURK Putative transposase                             93   1e-17
Q1LK93.1 Q1LK93_RALME Transposase catalytic site IS1087B               93   1e-17
A4JUH3.1 A4JUH3_BURVG Integrase, catalytic region                      91   7e-17
A2WBD1.1 A2WBD1_9BURK Integrase                                        90   1e-16
B9BAR5.1 B9BAR5_9BURK Transposase                                      89   2e-16
A4JQE6.1 A4JQE6_BURVG Integrase, catalytic region                      88   4e-16
D5WA30.1 D5WA30_BURSC Integrase catalytic region                       88   5e-16

>B1G6L8.1 B1G6L8_9BURK Integrase catalytic region
          Length = 273

 Score =  102 bits (253), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 45/53 (84%), Positives = 52/53 (98%)

Query: 1   MKHDYIAFMNKPDVPTALTHLASAFEQYNERHPHKAVKHRSPRQFRRAAASAT 53
           MKHDY+AFM+KPDVPTAL HLA+AFEQYNERHPHKA+K+RSPR+FRRAAAS+T
Sbjct: 221 MKHDYVAFMDKPDVPTALAHLAAAFEQYNERHPHKALKYRSPREFRRAAASST 273


>B1G9T2.1 B1G9T2_9BURK Integrase catalytic region
          Length = 278

 Score = 96.7 bits (239), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 43/53 (81%), Positives = 50/53 (94%)

Query: 1   MKHDYIAFMNKPDVPTALTHLASAFEQYNERHPHKAVKHRSPRQFRRAAASAT 53
           +KHDYIAFM+KPDVPTAL+HLA AFE YNERHPHKA+K+RSPR+FRR AAS+T
Sbjct: 226 IKHDYIAFMHKPDVPTALSHLAGAFEHYNERHPHKALKYRSPREFRRTAASST 278


>B2T5P8.1 B2T5P8_BURPP Integrase catalytic region
          Length = 273

 Score = 96.7 bits (239), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 43/53 (81%), Positives = 49/53 (92%)

Query: 1   MKHDYIAFMNKPDVPTALTHLASAFEQYNERHPHKAVKHRSPRQFRRAAASAT 53
           +KHDYIAFM KPDVPTAL+HLA AFE YNERHPHKA+K+RSPR+FRR AAS+T
Sbjct: 221 IKHDYIAFMEKPDVPTALSHLADAFEHYNERHPHKALKYRSPREFRRTAASST 273


>Q9XAT9.1 Q9XAT9_9BURK Putative transposase
          Length = 411

 Score = 93.2 bits (230), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 41/53 (77%), Positives = 47/53 (88%)

Query: 1   MKHDYIAFMNKPDVPTALTHLASAFEQYNERHPHKAVKHRSPRQFRRAAASAT 53
           MK DYIAFMNKPDVPTAL+ L  AFEQYN+ HPHKA+K+RSPR+FRRAA S+T
Sbjct: 359 MKRDYIAFMNKPDVPTALSQLTVAFEQYNDWHPHKALKYRSPREFRRAATSST 411


>Q1LK93.1 Q1LK93_RALME Transposase catalytic site IS1087B
          Length = 278

 Score = 92.8 bits (229), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 41/53 (77%), Positives = 47/53 (88%)

Query: 1   MKHDYIAFMNKPDVPTALTHLASAFEQYNERHPHKAVKHRSPRQFRRAAASAT 53
           MK DYIAFMNKPDVPTAL+ L  AFEQYN+ HPHKA+K+RSPR+FRRAA S+T
Sbjct: 226 MKRDYIAFMNKPDVPTALSQLTVAFEQYNDWHPHKALKYRSPREFRRAATSST 278


>A4JUH3.1 A4JUH3_BURVG Integrase, catalytic region
          Length = 278

 Score = 90.5 bits (223), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 39/53 (73%), Positives = 49/53 (92%)

Query: 1   MKHDYIAFMNKPDVPTALTHLASAFEQYNERHPHKAVKHRSPRQFRRAAASAT 53
           MKH+Y+A+M+KPD PTAL+ LA+AFE YNERHPHKA+K+RSPR+FRR AAS+T
Sbjct: 226 MKHNYVAYMDKPDAPTALSRLAAAFEHYNERHPHKALKYRSPREFRRTAASST 278


>A2WBD1.1 A2WBD1_9BURK Integrase
          Length = 297

 Score = 89.7 bits (221), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 39/53 (73%), Positives = 47/53 (88%)

Query: 1   MKHDYIAFMNKPDVPTALTHLASAFEQYNERHPHKAVKHRSPRQFRRAAASAT 53
           MKHDY+A+M+KPD PTAL+ LA AFE YNERHPHKA+K+RSPR+FRR A S+T
Sbjct: 245 MKHDYVAYMDKPDAPTALSRLAIAFEHYNERHPHKALKYRSPREFRRNAVSST 297


>B9BAR5.1 B9BAR5_9BURK Transposase
          Length = 278

 Score = 89.0 bits (219), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 38/53 (71%), Positives = 48/53 (90%)

Query: 1   MKHDYIAFMNKPDVPTALTHLASAFEQYNERHPHKAVKHRSPRQFRRAAASAT 53
           MKH+Y+A+M+KPD PTAL+HLA AFE YNERHPHKA+++RSPR+FRR A S+T
Sbjct: 226 MKHNYVAYMDKPDAPTALSHLAIAFEHYNERHPHKALQYRSPREFRRNAVSST 278


>A4JQE6.1 A4JQE6_BURVG Integrase, catalytic region
          Length = 278

 Score = 87.8 bits (216), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 38/53 (71%), Positives = 47/53 (88%)

Query: 1   MKHDYIAFMNKPDVPTALTHLASAFEQYNERHPHKAVKHRSPRQFRRAAASAT 53
           MKH+Y+A+M+KPD PTAL+ LA AFE YNERHPHKA+K+RSPR+FRR A S+T
Sbjct: 226 MKHNYVAYMDKPDAPTALSRLAIAFEHYNERHPHKALKYRSPREFRRNAVSST 278


>D5WA30.1 D5WA30_BURSC Integrase catalytic region
          Length = 297

 Score = 87.8 bits (216), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 38/52 (73%), Positives = 47/52 (90%)

Query: 1   MKHDYIAFMNKPDVPTALTHLASAFEQYNERHPHKAVKHRSPRQFRRAAASA 52
           MKH+Y+A+M+KPD PTAL+ LA AFE YNERHPHKA+K+RSPR+FRRAA S+
Sbjct: 245 MKHNYVAYMDKPDAPTALSRLAVAFEHYNERHPHKALKYRSPREFRRAAESS 296