BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0031.0258.p (989 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value D8IUI5.1 D8IUI5_HERSS Signal peptide protein 2016 0.0 B5S1U7.1 B5S1U7_RALSO Polysaccharide transport system component ... 781 0.0 D8N954.1 D8N954_RALSO Putative polysaccharide transport system c... 781 0.0 D8P0D5.1 D8P0D5_RALSO Putative polysaccharide transport system c... 778 0.0 A3RZV3.1 A3RZV3_RALSO Putative uncharacterized protein 771 0.0 D8NR78.1 D8NR78_RALSO Putative polysaccharide transport system c... 770 0.0 Q8XX42.1 Q8XX42_RALSO Probable polysaccharide transport system c... 769 0.0 B5SFQ7.1 B5SFQ7_RALSO Polysaccharide transport system component ... 761 0.0 Q0JZ38.1 Q0JZ38_CUPNH Putative uncharacterized protein h16_B2204 743 0.0 B2U9H1.1 B2U9H1_RALPJ TM1410 hypothetical-related protein 738 0.0 >D8IUI5.1 D8IUI5_HERSS Signal peptide protein Length = 989 Score = 2016 bits (5222), Expect = 0.0, Method: Compositional matrix adjust. Identities = 984/989 (99%), Positives = 985/989 (99%) Query: 1 MAAAMGNKKTVIRPSSAWRMVRTFVWTLAAAAGALLTGSAPAQGTVGTAPAPTSAAFYYG 60 MAAAMGNKKTVIRPSSAWRMVRTFVWTLAAAA ALLTGSAPAQGT TAPAPTSAAFYYG Sbjct: 1 MAAAMGNKKTVIRPSSAWRMVRTFVWTLAAAAAALLTGSAPAQGTAATAPAPTSAAFYYG 60 Query: 61 VNPPLADLQAFDVAVVEPEFVRNPAARTRAAADGMHQLFAYVSLGEVQPSRPYYKQLPPG 120 VNPPLADLQAFDVAVVEPEFVRNPAARTRAAADGMHQLFAYVSLGEVQPSRPYYKQLPPG Sbjct: 61 VNPPLADLQAFDVAVVEPEFVRNPAARTRAAADGMHQLFAYVSLGEVQPSRPYYKQLPPG 120 Query: 121 LLRGDNAAWGSRVIDQNAPGWRDFFLDKIIAPLWAQGWRGFFLDTLDSYQLFAKTDAERA 180 LLRGDNAAWGSRVIDQNAPGWRDFFLDKIIAPLWAQGWRGFFLDTLDSYQLFAKTDAERA Sbjct: 121 LLRGDNAAWGSRVIDQNAPGWRDFFLDKIIAPLWAQGWRGFFLDTLDSYQLFAKTDAERA 180 Query: 181 VQTQAMIATLREFKRRYPEAKLILNRGFELLPEIAPLTYAVAAESLYRGYDAGRRSYGPV 240 VQTQAMIATLREFKRRYPEAKLILNRGFELLPEIAPLTYAVAAESLYRGYDAGRRSYGPV Sbjct: 181 VQTQAMIATLREFKRRYPEAKLILNRGFELLPEIAPLTYAVAAESLYRGYDAGRRSYGPV 240 Query: 241 KDNDRAWLMGQMQTARERYHLPVIAIDYVDPQQSGARALARETAQKISADGFIPWVADGG 300 KDNDRAWLMGQMQTARERYHLPVIAIDYVDPQQSGARALARETAQKISADGFIPWVADGG Sbjct: 241 KDNDRAWLMGQMQTARERYHLPVIAIDYVDPQQSGARALARETAQKISADGFIPWVADGG 300 Query: 301 LVSMGVSSVELVPRNVLVLLDVAEGDDLHTTEAQRFLGIQLNHLGLRYEFRDVGREGLPT 360 LVSMGVSSVELVPRNVLVLLDVAEGDDLHTTEAQRFLGIQLNHLGLRYEFRDVGREGLPT Sbjct: 301 LVSMGVSSVELVPRNVLVLLDVAEGDDLHTTEAQRFLGIQLNHLGLRYEFRDVGREGLPT 360 Query: 361 EPLAGRYAGVVTWFRSGTNHQRLGPWIGQRIKEGVPVAIFSAFGFQMTKLSAGMLGLTSF 420 EPLAGRYAGVVTWFRSGTNHQRLGPWIGQRIKEGVPVAIFSAFGFQMTKLSAGMLGLTSF Sbjct: 361 EPLAGRYAGVVTWFRSGTNHQRLGPWIGQRIKEGVPVAIFSAFGFQMTKLSAGMLGLTSF 420 Query: 421 SAPVPEQLDVTHYDPELMGFETRPRVDRTQLENVRLSDPAAPVLLRMKDGRDNTYDAAAI 480 SAPVPEQLDVTHYDPELMGFETRPRVDRTQLENVRLSDPAAPVLLRMKDGRDNTYDAAAI Sbjct: 421 SAPVPEQLDVTHYDPELMGFETRPRVDRTQLENVRLSDPAAPVLLRMKDGRDNTYDAAAI 480 Query: 481 TPWGGFALAPFAITTAPVIDPPRWVLQPMLFLKRALRLPDMAVPDVTTEGGRRIQTSHLD 540 TPWGGFALAPFAITTAPVIDPPRWVLQPMLFLKRALRLPDMAVPDVTTEGGRRIQTSHLD Sbjct: 481 TPWGGFALAPFAITTAPVIDPPRWVLQPMLFLKRALRLPDMAVPDVTTEGGRRIQTSHLD 540 Query: 541 GDGFPSKAEYPGSPFAVEVLQREIWDRYRFPVTVSVVEGELSPQGVYPQLSAQTTALARK 600 GDGFPSKAEYPGSPFAVEVLQREIWDRYRFPVTVSVVEGELSPQGVYPQLSAQTTALARK Sbjct: 541 GDGFPSKAEYPGSPFAVEVLQREIWDRYRFPVTVSVVEGELSPQGVYPQLSAQTTALARK 600 Query: 601 MFTLPYIEPASHSFSHPFNWADAMHDTRTADITQMDGDASRTLEIPNYKFNLQREIKESM 660 MFTLPYIEPASHSFSHPFNWADAMHDTRTADITQMDGDASRTLEIPNYKFNLQREIK SM Sbjct: 601 MFTLPYIEPASHSFSHPFNWADAMHDTRTADITQMDGDASRTLEIPNYKFNLQREIKGSM 660 Query: 661 DYINNTLLPPGKKAEVFLWTGNCVPPPEAIAQTYLDGYLNMNGGDTMITKSRNTWTDIAA 720 DYINNTLLPPGKKAEVFLWTGNCVPPPEAIAQTYLDGYLNMNGGDTMITKSRNTWTDIAA Sbjct: 661 DYINNTLLPPGKKAEVFLWTGNCVPPPEAIAQTYLDGYLNMNGGDTMITKSRNTWTDIAA 720 Query: 721 QGVRKQGWYQVFAPNQDENVYTGNWTGPFYGFERAIESYELTGEPVRFKAVDIYYHFYAG 780 QGVRKQGWYQVFAPNQDENVYTGNWTGPFYGFERAIESYELTGEPVRFKAVDIYYHFYAG Sbjct: 721 QGVRKQGWYQVFAPNQDENVYTGNWTGPFYGFERAIESYELTGEPVRFKAVDIYYHFYAG 780 Query: 781 TKPASVAALHKIHRWAQAQPFTRLYVSQYIRKVIDFENTSIARTADGALVYRTGAHLRTL 840 TKPASVAALHKIHRWAQAQPFTRLYVSQYIRKVIDFENTSIARTADGALVYRTGAHLRTL Sbjct: 781 TKPASVAALHKIHRWAQAQPFTRLYVSQYIRKVIDFENTSIARTADGALVYRTGAHLRTL 840 Query: 841 RLPPGTPDYDLSAPGIAGIAPGPSGRYLITSAAEVRLKPPAQPAAQALPMLLEAGGQVGD 900 RLPPGTPDYDLSAPGIAGIAPGPSGRYLITSAAEVRLKPPAQPAAQALPMLLEAGGQVGD Sbjct: 841 RLPPGTPDYDLSAPGIAGIAPGPSGRYLITSAAEVRLKPPAQPAAQALPMLLEAGGQVGD 900 Query: 901 FQRSVNGNKVELRFSLLANGPSTFSVAGARSCSASADGAALPAGKSVSITGQSWFKNFTA 960 FQRSVNGN+VELRFSLLANGPSTFSVAGARSCSASADGAALPAGKSVSITGQSWFKNFTA Sbjct: 901 FQRSVNGNQVELRFSLLANGPSTFSVAGARSCSASADGAALPAGKSVSITGQSWFKNFTA 960 Query: 961 KSAVHQYDIGSSTAKLATTRHLVLVQCTL 989 KSAVHQYDIGSSTAKLATTRHLVLVQCTL Sbjct: 961 KSAVHQYDIGSSTAKLATTRHLVLVQCTL 989 >B5S1U7.1 B5S1U7_RALSO Polysaccharide transport system component protein Length = 948 Score = 781 bits (2018), Expect = 0.0, Method: Compositional matrix adjust. Identities = 425/919 (46%), Positives = 562/919 (61%), Gaps = 26/919 (2%) Query: 25 VWTLAAAA-GALLTGSAPAQGTVGTAPAPTSAAFYYGVNPPLADLQAFDVAVVEPEFVRN 83 W LA GA PAQ T AP + A++YG PP+A L+AFD VVEP+ + Sbjct: 17 CWALAQQGPGAAGEEKPPAQATTADAP---NIAWFYGDKPPVAQLRAFDAVVVEPDHGFD 73 Query: 84 PAARTRAAADGMHQLFAYVSLGEVQPSRPYYKQLPPGLLRGDNAAWGSRVIDQNAPGWRD 143 P+ A Q FAYVS+GEV P R +YK+LP L G NAAW S VIDQ+ P W Sbjct: 74 PSR----AKTPTTQWFAYVSVGEVAPERRWYKELPKAWLAGSNAAWASHVIDQSQPQWPA 129 Query: 144 FFLDKIIAPLWAQGWRGFFLDTLDSYQLFAKTDAERAVQTQAMIATLREFKRRYPEAKLI 203 F++D++IAPLW +G+RGFFLDTLDSYQL AK DA RA Q M+ +R K RYPEAKLI Sbjct: 130 FYVDRVIAPLWDRGYRGFFLDTLDSYQLVAKDDAARAAQEAGMVRVIRAIKARYPEAKLI 189 Query: 204 LNRGFELLPEIAPLTYAVAAESLYRGYDAGRRSYGPVKDNDRAWLMGQMQTARERYHLPV 263 NRGFE+LP++ L YAVA ESLYR +D G + Y V D DRAWLMGQ + ++ YHLPV Sbjct: 190 FNRGFEILPQVHDLAYAVAFESLYRAWDQGNKQYREVNDADRAWLMGQARKIQDEYHLPV 249 Query: 264 IAIDYVDPQQSGARALARETAQKISADGFIPWVADGGLVSMGVSSVELVPRNVLVLLDVA 323 I+IDY P RA ARETA++I A G IP+V D L ++GV +E++PR VL+L D A Sbjct: 250 ISIDYCPPAD---RACARETAKRIKAQGLIPYVTDPALSTIGVGRIEVLPRKVLILQDRA 306 Query: 324 EGDDLHTTEAQRFLGIQLNHLGLRYEFRDVGREGLPTEPLAGRYAGVVTWFRSGTNHQ-- 381 G D+ T+E RFL + LN LG ++ D+ + LP + RYAGVV W SG Q Sbjct: 307 PGTDIDTSEGVRFLAMPLNFLGYDVDYADLNQP-LPADVPPDRYAGVVVWVNSGPVRQAT 365 Query: 382 RLGPWIGQRIKEGVPVAIFSAFGFQMTKLSAGMLGLTSFSAPVPEQLDVTHYDPELMGFE 441 L W+ QRI +GV +A + G MLGL L V D ++GFE Sbjct: 366 ALTSWVRQRIHDGVRIAFMNELGLPADGSVTDMLGLQLVRGHATGPLSVVSQD-RMVGFE 424 Query: 442 TRPRVDRTQLENVRLSDPAAPVLLRMKDGRDNTYDAAAITPWGGFALAPFAITTAPVIDP 501 PR DR + +R+ LLR+K G D +DAAAIT WGG+ L P+A+ + I+ Sbjct: 425 MAPRPDRRAAQPIRVG-ANGQSLLRLKSG-DFEFDAAAITAWGGYVLNPYAVFSLGTIEQ 482 Query: 502 PRWVLQPMLFLKRALRLPDMAVPDVTTEGGRRIQTSHLDGDGFPSKAEYPGSPFAVEVLQ 561 RWV+QP+ FL+RAL LPDM +PDVTTE GRR+ H+DGDGF S+AE+PG ++ EVL Sbjct: 483 SRWVIQPLEFLRRALALPDMPIPDVTTENGRRLMMVHVDGDGFASRAEFPGPEYSGEVLM 542 Query: 562 REIWDRYRFPVTVSVVEGELSPQGVYPQLSAQTTALARKMFTLPYIEPASHSFSHPFNWA 621 +E+W+RY P T+SV+EGE+ P G+YP+L+ + A+ARKMF LPY+E +H++SHPF W Sbjct: 543 KEVWERYGIPTTLSVIEGEVGPSGLYPKLTPRLEAIARKMFALPYVELGTHTYSHPFKWG 602 Query: 622 DAMHDTRTADITQMDGDASRTLEIPNYKFNLQREIKESMDYINNTLLPPGKKAEVFLWTG 681 + D GDA+ L IP Y+FNL+REI S+ YIN L PP K+ + W+G Sbjct: 603 RTLPGAPAKD-QGGGGDAAFALIIPGYQFNLEREIGGSIRYINARLAPPDKRVRIIQWSG 661 Query: 682 NCVPPPEAIAQTYLDGYLNMNGGDTMITKSRNTWTDIAAQGVRKQ-GWYQVFAPNQDENV 740 +C PP A+ + G +N+NGGDT IT+S +WT+IAA G+ K G YQVFAPNQ+ENV Sbjct: 662 DCRPPELAVRMAWDAGVVNINGGDTTITRSSPSWTEIAALGIDKGPGAYQVFAPNQNENV 721 Query: 741 YTGNWTGPFYGFERAIESYELTGEPVRFKAVDIYYHFYAGTKPASVAALHKIHRWAQAQP 800 YT +WTGP+YGF+R IE+ ++T P RFK +++YYH Y+GTK ASV AL ++ +A +QP Sbjct: 722 YTNDWTGPYYGFDRLIETLQMTDTPYRFKPINLYYHMYSGTKLASVKALKTVYDYALSQP 781 Query: 801 FTRLYVSQYIRKVIDFENTSIARTADGALVYRTGAHLRTLR-LPPGTPDYDLSAPGIAGI 859 +Y ++Y+ KV+DF + ++AR + A + R LR LR + PGTP + A G+AG Sbjct: 782 VLPVYATEYVAKVLDFRDMAVARDGE-AWIVRGNGDLRELRWMAPGTP-HLADARGVAGY 839 Query: 860 APGPSGRYLITSAAEVRLKPPAQPAAQALPMLLEAGGQVGDFQRSVNGNKVELRFSLLAN 919 G Y+ R P L EA V +RS NG + F Sbjct: 840 GKAAGGIYIHLDGGAARFAMSTDAQTAQPPYLAEAAAFVQRLERSGNG----MSFDAGGY 895 Query: 920 GPSTFSVAGARSCSASADG 938 +A A +CS DG Sbjct: 896 YKPFVRLANAGACSVQVDG 914 >D8N954.1 D8N954_RALSO Putative polysaccharide transport system component signal peptide protein (RagA) Length = 950 Score = 781 bits (2016), Expect = 0.0, Method: Compositional matrix adjust. Identities = 430/934 (46%), Positives = 565/934 (60%), Gaps = 27/934 (2%) Query: 38 GSAPAQGTVGTAPAPTSAAFYYGVNPPLADLQAFDVAVVEPEFVRNPA-ARTRAAADGMH 96 G+ P Q AP + A++YG PP+A L+AFD VVEP+ +P+ ART A Sbjct: 33 GAPPVQAATAEVEAP-NIAWFYGDKPPVAQLRAFDAVVVEPDHGFDPSRARTPAT----- 86 Query: 97 QLFAYVSLGEVQPSRPYYKQLPPGLLRGDNAAWGSRVIDQNAPGWRDFFLDKIIAPLWAQ 156 Q FAYVSLGEV P R +Y++LP L G NAAW SRVIDQ+ P W F++D +IAPLW + Sbjct: 87 QWFAYVSLGEVAPGRRWYQELPKAWLAGSNAAWASRVIDQSQPQWPAFYVDHVIAPLWDK 146 Query: 157 GWRGFFLDTLDSYQLFAKTDAERAVQTQAMIATLREFKRRYPEAKLILNRGFELLPEIAP 216 G+RGFFLDTLDSYQL AK A RA Q M+ +R K RYPEAKLI NRGFE+LP++ Sbjct: 147 GYRGFFLDTLDSYQLVAKDPAARAAQEAGMVRVIRAIKARYPEAKLIFNRGFEILPQVHD 206 Query: 217 LTYAVAAESLYRGYDAGRRSYGPVKDNDRAWLMGQMQTARERYHLPVIAIDYVDPQQSGA 276 L YAVA ESLYR +D G + Y V + DRAWLMGQ + R+ Y LPVI+IDY P Sbjct: 207 LAYAVAFESLYRSWDQGSKQYREVSEADRAWLMGQARKIRDEYRLPVISIDYCPPAD--- 263 Query: 277 RALARETAQKISADGFIPWVADGGLVSMGVSSVELVPRNVLVLLDVAEGDDLHTTEAQRF 336 RA ARETA++I A G IP+V D L ++GV +E++PR VL+L D A D+ T+E RF Sbjct: 264 RACARETAKRIKAQGLIPYVTDPALSTVGVGRIEVLPRKVLILQDRAPNTDIDTSEGVRF 323 Query: 337 LGIQLNHLGLRYEFRDVGREGLPTEPLAGRYAGVVTWFRSGTNHQ--RLGPWIGQRIKEG 394 L + LN LG E+ DV + LP E RYAGVV W SG Q L W+ QRI +G Sbjct: 324 LAMPLNFLGYDVEYADVSQP-LPAEVPPDRYAGVVVWINSGPVRQVAALSSWVRQRIHDG 382 Query: 395 VPVAIFSAFGFQMTKLSAGMLGLTSFSAPVPEQLDVTHYDPELMGFETRPRVDRTQLENV 454 V +A + G MLGL L V D ++GFE PR DR + + Sbjct: 383 VRIAFMNELGLPADGSVTDMLGLQLVRGHATGPLSVVSQD-RIVGFEMAPRPDRRAAQPI 441 Query: 455 RLSDPAAPVLLRMKDGRDNTYDAAAITPWGGFALAPFAITTAPVIDPPRWVLQPMLFLKR 514 R+ LLR+K G D +DAAAITPWGG+ L P+A+ + I+ RWV+QP+ FL+R Sbjct: 442 RVGADGQS-LLRLKSG-DFEFDAAAITPWGGYVLNPYAVLSLGTIEQSRWVIQPLAFLRR 499 Query: 515 ALRLPDMAVPDVTTEGGRRIQTSHLDGDGFPSKAEYPGSPFAVEVLQREIWDRYRFPVTV 574 AL LPDM +PDVT+E GRR+ H+DGDGF S+AE+PG ++ EVL +E+W+RY P T+ Sbjct: 500 ALALPDMPIPDVTSENGRRLMLVHVDGDGFASRAEFPGPDYSGEVLMQEVWERYGIPTTL 559 Query: 575 SVVEGELSPQGVYPQLSAQTTALARKMFTLPYIEPASHSFSHPFNWADAMHDTRTADITQ 634 SV+EGE+ P G+YP+L+ + A+ARKMF LPY+E +H++SHPF W + Sbjct: 560 SVIEGEVGPSGLYPKLTPRLEAIARKMFALPYVELGTHTYSHPFKWGRTVPGVPA---QA 616 Query: 635 MDGDASRTLEIPNYKFNLQREIKESMDYINNTLLPPGKKAEVFLWTGNCVPPPEAIAQTY 694 GD++ L IP YKF+L+REI S+ YIN L PP K+ + W+G+C PP A+ + Sbjct: 617 EGGDSAFALTIPGYKFSLEREIGGSIRYINARLAPPDKRVRIVQWSGDCRPPELAVRMAW 676 Query: 695 LDGYLNMNGGDTMITKSRNTWTDIAAQGVRKQ-GWYQVFAPNQDENVYTGNWTGPFYGFE 753 G +N+NGGDT IT+S +WT+IAA G+ K G YQVFAPNQ+ENVYT +WTGP+YGF+ Sbjct: 677 DAGVVNINGGDTTITRSSPSWTEIAALGIDKGPGAYQVFAPNQNENVYTNDWTGPYYGFD 736 Query: 754 RAIESYELTGEPVRFKAVDIYYHFYAGTKPASVAALHKIHRWAQAQPFTRLYVSQYIRKV 813 R IE+ ++T P RFK +++YYH Y+GTK AS+ AL K++ +A AQP +Y ++Y+ KV Sbjct: 737 RLIETLQMTDTPYRFKPINLYYHMYSGTKLASLKALKKVYDYALAQPVLPIYATEYVAKV 796 Query: 814 IDFENTSIARTADGALVYRTGAHLRTLR-LPPGTPDYDLSAPGIAGIAPGPSGRYLITSA 872 +DF + +IAR D A V R LR LR + PGTP A G+AG G Y+ Sbjct: 797 LDFRDMAIARDGD-AWVVRGNGDLRELRWMAPGTPRL-ADARGVAGYGKAAGGIYIHLDG 854 Query: 873 AEVRLKPPAQPAAQALPMLLEAGGQVGDFQRSVNGNKVELRFSLLANGPSTFSVAGARSC 932 R A L EA V QR NG + F +A A +C Sbjct: 855 GAARFAVSTAAQAAQPAYLAEAAAFVQRLQRHGNG----MSFDAGGYYKPFVRLANAGAC 910 Query: 933 SASADGAALPAGKSVSITGQSWFKNFTAKSAVHQ 966 S DG A + T + A+S +Q Sbjct: 911 SIQVDGRPARAAHAQDNTLRVELSGVAAQSVTYQ 944 >D8P0D5.1 D8P0D5_RALSO Putative polysaccharide transport system component signal peptide protein (RagA) Length = 934 Score = 778 bits (2009), Expect = 0.0, Method: Compositional matrix adjust. Identities = 423/912 (46%), Positives = 558/912 (61%), Gaps = 25/912 (2%) Query: 31 AAGALLTGSAPAQGTVGTAPAPTSAAFYYGVNPPLADLQAFDVAVVEPEFVRNPAARTRA 90 A GA GS P Q T AP + A++YG P+A L+AFD VVEP+ +P+ Sbjct: 10 APGAASEGSPPVQTTTAEAP---NIAWFYGDKLPVAQLRAFDAVVVEPDHGFDPSR---- 62 Query: 91 AADGMHQLFAYVSLGEVQPSRPYYKQLPPGLLRGDNAAWGSRVIDQNAPGWRDFFLDKII 150 A Q FAYVS+GEV P R +YK+LP L G NAAW SRVIDQ+ P W F++D +I Sbjct: 63 AKTPTTQWFAYVSVGEVAPERRWYKELPKAWLAGSNAAWASRVIDQSQPQWPAFYVDHVI 122 Query: 151 APLWAQGWRGFFLDTLDSYQLFAKTDAERAVQTQAMIATLREFKRRYPEAKLILNRGFEL 210 APLW +G+RGFFLDTLDSYQL AK DA RA Q M+ +R K RYPEAKLI NRGFE+ Sbjct: 123 APLWDKGYRGFFLDTLDSYQLVAKDDAARAAQEAGMVRVIRAIKARYPEAKLIFNRGFEI 182 Query: 211 LPEIAPLTYAVAAESLYRGYDAGRRSYGPVKDNDRAWLMGQMQTARERYHLPVIAIDYVD 270 LP++ L YAVA ESLYRG+D G + Y V D DRAWLMGQ + R+ Y LPVI+IDY Sbjct: 183 LPQVHDLAYAVAFESLYRGWDQGSKQYREVNDADRAWLMGQARKIRDEYRLPVISIDYCP 242 Query: 271 PQQSGARALARETAQKISADGFIPWVADGGLVSMGVSSVELVPRNVLVLLDVAEGDDLHT 330 P RA AR+TA++I A G IP+V D L ++GV +E++PR VL+L D+ D+ T Sbjct: 243 PAD---RACARDTAKRIKAQGLIPYVTDPALSTIGVGRIEVLPRKVLILQDLTPNTDIDT 299 Query: 331 TEAQRFLGIQLNHLGLRYEFRDVGREGLPTEPLAGRYAGVVTWFRSGTNHQ--RLGPWIG 388 +E RFL + LN LG E+ D+ + LP E RYAGVV W SG Q L W+ Sbjct: 300 SEGVRFLAMPLNFLGYDVEYADLSQP-LPAEVPPDRYAGVVVWVNSGPVRQVAALSSWVR 358 Query: 389 QRIKEGVPVAIFSAFGFQMTKLSAGMLGLTSFSAPVPEQLDVTHYDPELMGFETRPRVDR 448 QR+++GV +A + G +LGL L V D ++GFE PR DR Sbjct: 359 QRVRDGVRIAFMNELGLPADGSVTDLLGLQLVRGRATGPLSVVSQD-RIVGFEMEPRPDR 417 Query: 449 TQLENVRLSDPAAPVLLRMKDGRDNTYDAAAITPWGGFALAPFAITTAPVIDPPRWVLQP 508 + +R+ LLR+K G D +DAAAIT WGG+ L+P+A+ + I+ RWV+QP Sbjct: 418 RAAQPIRVG-ANGQSLLRLKSG-DFEFDAAAITEWGGYVLSPYAVFSLGTIEQSRWVIQP 475 Query: 509 MLFLKRALRLPDMAVPDVTTEGGRRIQTSHLDGDGFPSKAEYPGSPFAVEVLQREIWDRY 568 + FL+RAL LPDM VPDVT+E GRR+ H+DGDGF S+AE+PG ++ EVL +E+W+RY Sbjct: 476 LEFLRRALALPDMPVPDVTSENGRRLMLVHVDGDGFASRAEFPGPEYSGEVLMQEVWERY 535 Query: 569 RFPVTVSVVEGELSPQGVYPQLSAQTTALARKMFTLPYIEPASHSFSHPFNWADAMHDTR 628 P T+SV+EGE+ P G+YPQL+ + A+ARKMF LPY+E +H++SHPF W M Sbjct: 536 GIPTTLSVIEGEVGPSGLYPQLTPRLEAVARKMFALPYVELGTHTYSHPFKWGRTMPGVP 595 Query: 629 TADITQMDGDASRTLEIPNYKFNLQREIKESMDYINNTLLPPGKKAEVFLWTGNCVPPPE 688 T GD + L IP YKF+L+REI S+ YIN L PPGK+ + W+G+C PP Sbjct: 596 TR-AEGGGGDTAFALTIPGYKFSLEREIGGSIRYINARLAPPGKRVRIVQWSGDCRPPEL 654 Query: 689 AIAQTYLDGYLNMNGGDTMITKSRNTWTDIAAQGVRKQ-GWYQVFAPNQDENVYTGNWTG 747 A+ + G +N+NGGDT IT+S +WT+IA G+ K G YQ+FAPNQ+ENVYT +WTG Sbjct: 655 AVRMAWDAGVVNINGGDTTITRSSPSWTEIAPLGIDKGPGAYQIFAPNQNENVYTNDWTG 714 Query: 748 PFYGFERAIESYELTGEPVRFKAVDIYYHFYAGTKPASVAALHKIHRWAQAQPFTRLYVS 807 P+YGF+R +E+ ++T P RFK ++IYYH Y+GTK AS+ AL K++ +A +QP +Y + Sbjct: 715 PYYGFDRLVETLQMTDTPYRFKPINIYYHMYSGTKLASLKALKKVYDYALSQPVLPVYAT 774 Query: 808 QYIRKVIDFENTSIARTADGALVYRTGAHLRTLR-LPPGTPDYDLSAPGIAGIAPGPSGR 866 +Y+ KV+DF + IAR D A V R LR LR + PG+P A G+AG G Sbjct: 775 EYVAKVLDFRDMVIARDGD-AWVVRGNGDLRELRWMAPGSPRL-ADARGVAGYGKAAGGI 832 Query: 867 YLITSAAEVRLKPPAQPAAQALPMLLEAGGQVGDFQRSVNGNKVELRFSLLANGPSTFSV 926 Y+ R A L EA V +R NG + F + Sbjct: 833 YIHLDGGAARFAVSTDAQAAQPAYLAEAAAFVQRLERRGNG----MSFDAGGYYKPFVRL 888 Query: 927 AGARSCSASADG 938 A A +CS DG Sbjct: 889 ANAGACSIQVDG 900 >A3RZV3.1 A3RZV3_RALSO Putative uncharacterized protein Length = 977 Score = 771 bits (1991), Expect = 0.0, Method: Compositional matrix adjust. Identities = 428/933 (45%), Positives = 563/933 (60%), Gaps = 34/933 (3%) Query: 25 VWTLAAAA-GALLTGSAPAQGTVGTAPAPTSAAFYYGVNPPLADLQAFDVAVVEPEFVRN 83 W LA GA PAQ T AP + A++YG PP+A L+AFD VVEP+ + Sbjct: 38 CWALAQQGPGAAGEEKPPAQATTADAP---NIAWFYGDKPPVAQLRAFDAVVVEPDHGFD 94 Query: 84 PAARTRAAADGMHQLFAYVSLGEVQPSRPYYKQLPPGLLRGDNAAWGSRVIDQNAPGWRD 143 P+ A Q FAYVS+GEV P R +YK+LP L G NAAW S VIDQ+ P W Sbjct: 95 PSR----AKTPTTQWFAYVSVGEVAPERRWYKELPKAWLAGSNAAWASHVIDQSQPQWPA 150 Query: 144 FFLDKIIAPLWAQGWRGFFLDTLDSYQLFAKTDAERAVQTQAMIATLREFKRRYPEAKLI 203 F++D++IAPLW +G+RGFFLDTLDSYQL AK DA RA Q M+ +R K RYPEAKLI Sbjct: 151 FYVDRVIAPLWDRGYRGFFLDTLDSYQLVAKDDAARAAQEAGMVRVIRAIKARYPEAKLI 210 Query: 204 LNRGFELLPEIAPLTYAVAAESLYRGYDAGRRSYGPVKDNDRAWLMGQMQTARERYHLPV 263 NRGFE+LP++ L YAVA ESLYR +D G + Y V D DRAWLMGQ + ++ YHLPV Sbjct: 211 FNRGFEILPQVHDLAYAVAFESLYRAWDQGNKQYREVNDADRAWLMGQARKIQDEYHLPV 270 Query: 264 IAIDYVDPQQSGARALARETAQKISADGFIPWVADGGLVSMGVSSVELVPRNVLVLLDVA 323 I+IDY P RA ARETA++I A G IP+V D L ++GV +E++PR VL+L D A Sbjct: 271 ISIDYCPPAD---RACARETAKRIKAQGLIPYVTDPALSTIGVGRIEVLPRKVLILQDRA 327 Query: 324 EGDDLHTTEAQRFLGIQLNHLGLRYEFRDVGREGLPTEPLAGRYAGVVTWFRSGTNHQ-- 381 G D+ T+E RFL + LN LG ++ D+ + LP + RYAGVV W SG Q Sbjct: 328 PGTDIDTSEGVRFLAMPLNFLGYDVDYADLN-QPLPADVPPDRYAGVVVWVNSGPVRQAA 386 Query: 382 RLGPWIGQRIKEGVPVAIFSAFGFQMTKLSAGMLGLTSFSAPVPEQLDVTHYDPELMGFE 441 L W+ QRI +GV +A + G MLGL L V D ++GFE Sbjct: 387 ALTSWVRQRIHDGVRIAFMNELGLPADGSVTDMLGLQLVRGHATGPLSVVSQD-RIVGFE 445 Query: 442 TRPRVDRTQLENVRLSDPAAPVLLRMKDGRDNTYDAAAITPWGGFALAPFAITTAPVIDP 501 PR DR + +R+ LLR+K G D +DAAAIT WGG+ L P+A+ + I+ Sbjct: 446 MAPRPDRRAAQPIRVG-ANGQSLLRLKSG-DFEFDAAAITAWGGYVLNPYAVFSLGTIEQ 503 Query: 502 PRWVLQPMLFLKRALRLPDMAVPDVTTEGGRRIQTSHLDGDGFPSKAEYPGSPFAVEVLQ 561 RWV+QP+ FL+RAL LPDM +PDVTTE GRR+ H+DGDGF S+AE+PG ++ EVL Sbjct: 504 SRWVIQPLEFLRRALALPDMPIPDVTTENGRRLMMVHVDGDGFASRAEFPGPEYSGEVLM 563 Query: 562 REIWDRYRFPVTVSVVEGELSPQGVYPQLSAQTTALARKMFTLPYIEPASHSFSHPFNWA 621 +E+W+RY P T+SV+EGE+ P G+YP+L+ + A+ARKMF LPY+E +H++SHPF W Sbjct: 564 KEVWERYGIPTTLSVIEGEVGPSGLYPKLTPRLEAIARKMFALPYVELGTHTYSHPFKWG 623 Query: 622 DAMHDTRTADITQMDGDASRTLEIPNYKFNLQREIKESMDYINNTLLPPGKKAEVFLWTG 681 + A GDA+ L IP Y+FNL+REI S+ YIN L PP K+ ++ W+G Sbjct: 624 RTLPGA-PAKGQGGGGDAAFALTIPGYQFNLEREIGGSIRYINARLAPPDKRVKIIQWSG 682 Query: 682 NCVPPPEAIAQTYLDGYLNMNGGDTMITKSRNTWTDIAAQGVRKQ-GWYQVFAPNQDENV 740 +C PP A+ + G +N+NGGDT IT+S +WT+IAA G+ K G YQVFAPNQ+ENV Sbjct: 683 DCRPPELAVRMAWDAGVVNINGGDTTITRSSPSWTEIAALGIDKGPGAYQVFAPNQNENV 742 Query: 741 YTGNWTGPFYGFERAIESYELTGEPVRFKAVDIYYHFYAGTKPASVAALHKIHRWAQAQP 800 YT +WTGP+YGF+R IE+ ++T P RFK +++YYH Y+GTK ASV AL ++ +A +QP Sbjct: 743 YTNDWTGPYYGFDRLIETLQMTDTPYRFKPINLYYHMYSGTKLASVKALKTVYDYALSQP 802 Query: 801 FTRLYVSQYIRKVIDFENTSIARTADGALVYRTGAHLRTLR-LPPGTPDYDLSAPGIAGI 859 +Y ++Y+ KV+DF + ++AR + A + R LR LR + PGTP + A G+AG Sbjct: 803 VLPVYATEYVAKVLDFRDMAVARDGE-AWIVRGNGDLRELRWMAPGTP-HLADARGVAGY 860 Query: 860 APGPSGRYLITSAAEVRLKPPAQPAAQALPMLLEAGGQVGDFQRSVNGNKVELRFSLLAN 919 G Y+ R P L EA V QR V L Sbjct: 861 GKAAGGIYIHLDGGAARFAMSTDAQTAQPPYLAEAAAFV-QRQRHV-----------LRR 908 Query: 920 GPSTFSVAGARSCSASADGAALPAGKSVSITGQ 952 G +V AR C PAG GQ Sbjct: 909 GRLLQAVRAARQCRRVQRPGRRPAGPHGPRAGQ 941 >D8NR78.1 D8NR78_RALSO Putative polysaccharide transport system component signal peptide protein (RagA) Length = 947 Score = 770 bits (1988), Expect = 0.0, Method: Compositional matrix adjust. Identities = 424/921 (46%), Positives = 563/921 (61%), Gaps = 32/921 (3%) Query: 25 VWTLAAAA-GALLTGSAPAQGTVGTAPAPTSAAFYYGVNPPLADLQAFDVAVVEPEFVRN 83 W LA GA P Q T AP + A++YG PP+A L+AFD VVEP+ + Sbjct: 18 CWALAQQGPGAAGEEKPPVQATTADAP---NIAWFYGDKPPVAQLRAFDAVVVEPDHGFD 74 Query: 84 PAARTRAAADGMHQLFAYVSLGEVQPSRPYYKQLPPGLLRGDNAAWGSRVIDQNAPGWRD 143 P+ A Q FAYVSLGEV P R +YK+LP L G NAAW S VIDQ+ P W Sbjct: 75 PSR----AKTPTTQWFAYVSLGEVAPERRWYKELPKAWLAGSNAAWASHVIDQSQPQWPA 130 Query: 144 FFLDKIIAPLWAQGWRGFFLDTLDSYQLFAKTDAERAVQTQAMIATLREFKRRYPEAKLI 203 F++D++IAPLW +G+RGFFLDTLDSYQL AK DA RA Q M+ +R K RYPEAKLI Sbjct: 131 FYVDRVIAPLWDKGYRGFFLDTLDSYQLVAKDDAARAAQEAGMVRVIRAIKARYPEAKLI 190 Query: 204 LNRGFELLPEIAPLTYAVAAESLYRGYDAGRRSYGPVKDNDRAWLMGQMQTARERYHLPV 263 NRGFE+LP++ L YAVA ESLYR +D G + Y V D DRAWLMGQ + ++ YHLPV Sbjct: 191 FNRGFEILPQVHDLAYAVAFESLYRAWDQGNKQYREVSDADRAWLMGQARKIQDEYHLPV 250 Query: 264 IAIDYVDPQQSGARALARETAQKISADGFIPWVADGGLVSMGVSSVELVPRNVLVLLDVA 323 I+IDY P RA ARETA++I A G IP+V D L ++GV +E++PR V++L D A Sbjct: 251 ISIDYCPPAD---RACARETAKRIKAQGLIPYVTDPALSTIGVGRIEVLPRKVMILQDRA 307 Query: 324 EGDDLHTTEAQRFLGIQLNHLGLRYEFRDVGREGLPTEPLAGRYAGVVTWFRSGTNHQ-- 381 G D+ T+E RFL + LN LG ++ D+ + LP + RYAGVV W SG Q Sbjct: 308 PGTDIDTSEGVRFLAMPLNFLGYDVDYADLNQP-LPADVPPDRYAGVVVWVNSGPVRQAA 366 Query: 382 RLGPWIGQRIKEGVPVAIFSAFGFQMTKLSAGMLGLTSFSAPVPEQLDVTHYDPELMGFE 441 L W+ QRI +GV +A + G MLGL L V D ++GFE Sbjct: 367 ALTSWVRQRIHDGVRIAFMNELGLPADGNVTDMLGLQLVRGHATGPLSVVSQD-RIVGFE 425 Query: 442 TRPRVDRTQLENVRLSDPAAPVLLRMKDGRDNTYDAAAITPWGGFALAPFAITTAPVIDP 501 PR DR + +R+ LLR+K G D +DAAAIT WGG+ L P+A+ + I+ Sbjct: 426 MAPRPDRRAAQPIRVG-ANGQSLLRLKSG-DFEFDAAAITAWGGYVLNPYAVFSLGTIEQ 483 Query: 502 PRWVLQPMLFLKRALRLPDMAVPDVTTEGGRRIQTSHLDGDGFPSKAEYPGSPFAVEVLQ 561 RWV+QP+ FL+RAL LP+M +PDVTTE GRR+ H+DGDGF S+AE+PG ++ EVL Sbjct: 484 SRWVIQPLEFLRRALVLPEMPIPDVTTENGRRLMMVHVDGDGFASRAEFPGPEYSGEVLM 543 Query: 562 REIWDRYRFPVTVSVVEGELSPQGVYPQLSAQTTALARKMFTLPYIEPASHSFSHPFNWA 621 + +W+RY P T+SV+EGE+ P G+YP+L+ + +ARKMF LPY+E +H++SHPF W Sbjct: 544 KAVWERYGIPTTLSVIEGEVGPSGLYPKLTPRLEEIARKMFALPYVELGTHTYSHPFKWG 603 Query: 622 DAMHDTRTADITQMDGDASRTLEIPNYKFNLQREIKESMDYINNTLLPPGKKAEVFLWTG 681 + A GDA+ L IP Y+FNL+REI S+ YIN L PP K+ ++ W+G Sbjct: 604 RTLP---GAPAKGQGGDAAFALTIPGYQFNLEREIGGSIRYINARLAPPDKRVKIIQWSG 660 Query: 682 NCVPPPEAIAQTYLDGYLNMNGGDTMITKSRNTWTDIAAQGVRKQ-GWYQVFAPNQDENV 740 +C PP A+ + G +N+NGGDT IT+S +WT+IAA G+ K G YQVFAPNQ+ENV Sbjct: 661 DCRPPELAVRMAWDAGVVNINGGDTTITRSSPSWTEIAALGIDKGPGAYQVFAPNQNENV 720 Query: 741 YTGNWTGPFYGFERAIESYELTGEPVRFKAVDIYYHFYAGTKPASVAALHKIHRWAQAQP 800 YT +WTGP+YGF+R IE+ ++T P RFK +++YYH Y+GTK ASV AL ++ +A +QP Sbjct: 721 YTNDWTGPYYGFDRLIETLQMTDTPYRFKPINLYYHMYSGTKLASVKALKTVYDYALSQP 780 Query: 801 FTRLYVSQYIRKVIDFENTSIARTADGALVYRTGAHLRTLR-LPPGTPDYDLSAPGIAGI 859 +Y ++Y+ KV+DF + ++AR + A + R LR LR + PGTP A G+ G Sbjct: 781 VLPVYATEYVAKVLDFRDMAVARDGE-AWIVRGNGDLRELRWMAPGTPRL-ADARGVVGY 838 Query: 860 APGPSGRY--LITSAAEVRLKPPAQPAAQALPMLLEAGGQVGDFQRSVNGNKVELRFSLL 917 G Y L AA + AQ A P L EA V +RS +G + F Sbjct: 839 GKAAGGIYIHLDGGAAHFAMSTDAQTAQP--PYLAEAAAFVQRLERSSHG----MSFDAG 892 Query: 918 ANGPSTFSVAGARSCSASADG 938 +A A +CS DG Sbjct: 893 GYYKPFVRLANAGACSVQVDG 913 >Q8XX42.1 Q8XX42_RALSO Probable polysaccharide transport system component signal peptide protein Length = 948 Score = 769 bits (1985), Expect = 0.0, Method: Compositional matrix adjust. Identities = 432/934 (46%), Positives = 566/934 (60%), Gaps = 29/934 (3%) Query: 38 GSAPAQGTVGTAPAPTSAAFYYGVNPPLADLQAFDVAVVEPEFVRNPA-ARTRAAADGMH 96 G+ PAQ AP + A++YG PP+A L+AFD VVEP+ +P+ ART A Sbjct: 33 GALPAQAATAEAP---NIAWFYGDKPPVAQLRAFDAVVVEPDHGFDPSRARTPAT----- 84 Query: 97 QLFAYVSLGEVQPSRPYYKQLPPGLLRGDNAAWGSRVIDQNAPGWRDFFLDKIIAPLWAQ 156 Q FAYVS+GEV P R +Y+ LP L G NAAW SRVIDQ+ P W DF++D +IAPLW + Sbjct: 85 QWFAYVSVGEVAPGRRWYQALPKAWLAGSNAAWASRVIDQSQPQWPDFYVDHVIAPLWDK 144 Query: 157 GWRGFFLDTLDSYQLFAKTDAERAVQTQAMIATLREFKRRYPEAKLILNRGFELLPEIAP 216 G+RGFFLDTLDSYQL AK A RA Q MI +R K RYPEAKLI NRGFE+LP++ Sbjct: 145 GYRGFFLDTLDSYQLVAKDAAARAAQEAGMIRVIRAIKARYPEAKLIFNRGFEILPQVHD 204 Query: 217 LTYAVAAESLYRGYDAGRRSYGPVKDNDRAWLMGQMQTARERYHLPVIAIDYVDPQQSGA 276 L YAVA ESLYR +D G + Y V D DRAWLMGQ + R+ Y LPVI+IDY P Sbjct: 205 LVYAVAFESLYRSWDQGSKQYREVNDADRAWLMGQARRIRDEYRLPVISIDYCPPAD--- 261 Query: 277 RALARETAQKISADGFIPWVADGGLVSMGVSSVELVPRNVLVLLDVAEGDDLHTTEAQRF 336 RA ARETA++I A G IP+V D L ++GV +E++PR VL+L D A D+ T+E RF Sbjct: 262 RACARETARRIEAQGLIPYVTDPALSTIGVGRIEVLPRKVLILQDRAPNTDIDTSEGVRF 321 Query: 337 LGIQLNHLGLRYEFRDVGREGLPTEPLAGRYAGVVTWFRSGTNHQ--RLGPWIGQRIKEG 394 L + LN LG E+ D+G+ LP E RYAGVV W SG Q L W+ QRI +G Sbjct: 322 LAMPLNFLGYDVEYADLGQP-LPAEVPPDRYAGVVVWINSGPVRQVAALSSWVRQRIHDG 380 Query: 395 VPVAIFSAFGFQMTKLSAGMLGLTSFSAPVPEQLDVTHYDPELMGFETRPRVDRTQLENV 454 V +A + G MLGL L V D ++GFE PR DR + + Sbjct: 381 VRIAFMNELGLPADGSLTDMLGLQLVRGHATGPLSVVSQD-RIVGFEMAPRPDRRAAQPI 439 Query: 455 RLSDPAAPVLLRMKDGRDNTYDAAAITPWGGFALAPFAITTAPVIDPPRWVLQPMLFLKR 514 R+ LLR+K G D +DAAAITPWGG+ L P+A+ + I+ RWV+QP+ FL+R Sbjct: 440 RVGADGQS-LLRLKSG-DFEFDAAAITPWGGYVLNPYAVFSLGTIEQSRWVIQPLAFLRR 497 Query: 515 ALRLPDMAVPDVTTEGGRRIQTSHLDGDGFPSKAEYPGSPFAVEVLQREIWDRYRFPVTV 574 AL LPDM +PDVT+E GRR+ H+DGDGF S+AE+PG ++ EVL +E+W+RY P T+ Sbjct: 498 ALALPDMPIPDVTSENGRRLMLVHVDGDGFASRAEFPGPEYSGEVLMQEVWERYGIPTTL 557 Query: 575 SVVEGELSPQGVYPQLSAQTTALARKMFTLPYIEPASHSFSHPFNWADAMHDTRTADITQ 634 SV+EGE+ P G+YP+L+ + A+ARKMF LPY+E +H++SHPF W + A Sbjct: 558 SVIEGEVGPSGLYPKLTPRLEAIARKMFALPYVELGTHTYSHPFKWGRTVP---GAPAQA 614 Query: 635 MDGDASRTLEIPNYKFNLQREIKESMDYINNTLLPPGKKAEVFLWTGNCVPPPEAIAQTY 694 GD++ L IP YKF+L+REI S+ YIN L PP K+ + W+G+C PP A+ + Sbjct: 615 GGGDSAFALTIPGYKFSLEREIGGSIRYINARLAPPDKRVRIVQWSGDCRPPELAVRMAW 674 Query: 695 LDGYLNMNGGDTMITKSRNTWTDIAAQGVRKQ-GWYQVFAPNQDENVYTGNWTGPFYGFE 753 G N+NGGDT IT+S +WT+IA+ G+ K G YQVFAPNQ+ENVYT +WTGP+YGF+ Sbjct: 675 DAGVGNINGGDTTITRSSPSWTEIASLGIDKGPGAYQVFAPNQNENVYTNDWTGPYYGFD 734 Query: 754 RAIESYELTGEPVRFKAVDIYYHFYAGTKPASVAALHKIHRWAQAQPFTRLYVSQYIRKV 813 R IE+ ++T P RFK +++YYH Y+GTK AS+ AL K++ +A AQP +Y + Y+ KV Sbjct: 735 RLIETLQMTDTPYRFKPINLYYHMYSGTKLASLKALKKVYDYALAQPVLPIYATDYVAKV 794 Query: 814 IDFENTSIARTADGALVYRTGAHLRTLR-LPPGTPDYDLSAPGIAGIAPGPSGRYLITSA 872 +DF + +IAR D A V R LR LR + PGTP A G+AG G Y+ Sbjct: 795 LDFRDMAIARDGD-AWVVRGNGDLRELRWMAPGTPRL-ADAHGVAGYGKAAGGIYIHLDG 852 Query: 873 AEVRLKPPAQPAAQALPMLLEAGGQVGDFQRSVNGNKVELRFSLLANGPSTFSVAGARSC 932 R A L EA V +R NG + F +A A +C Sbjct: 853 GAARFAVSTDAQAVQPAYLAEAAAFVQRLERRGNG----MSFDAGGYYKPFVRLANAGAC 908 Query: 933 SASADGAALPAGKSVSITGQSWFKNFTAKSAVHQ 966 S DG A + T + A+S +Q Sbjct: 909 SIQVDGRPARAAHAQDNTVRVELSGVAAQSVTYQ 942 >B5SFQ7.1 B5SFQ7_RALSO Polysaccharide transport system component (Partial sequence c terminus) protein Length = 945 Score = 761 bits (1964), Expect = 0.0, Method: Compositional matrix adjust. Identities = 400/826 (48%), Positives = 531/826 (64%), Gaps = 21/826 (2%) Query: 25 VWTLAAAA-GALLTGSAPAQGTVGTAPAPTSAAFYYGVNPPLADLQAFDVAVVEPEFVRN 83 W LA GA PAQ T AP + A++YG PP+A L+AFD VVEP+ + Sbjct: 18 CWALAQQGPGAAGEEKPPAQATTADAP---NIAWFYGDKPPVAQLRAFDAVVVEPDHGFD 74 Query: 84 PAARTRAAADGMHQLFAYVSLGEVQPSRPYYKQLPPGLLRGDNAAWGSRVIDQNAPGWRD 143 P+ A Q FAYVS+GEV P R +YK+LP L G NAAW S VIDQ+ P W Sbjct: 75 PSR----AKTPTTQWFAYVSVGEVAPERRWYKELPKAWLAGSNAAWASHVIDQSQPQWPA 130 Query: 144 FFLDKIIAPLWAQGWRGFFLDTLDSYQLFAKTDAERAVQTQAMIATLREFKRRYPEAKLI 203 F++D++IAPLW +G+RGFFLDTLDSYQL AK DA RA Q M+ +R K RYPEAKLI Sbjct: 131 FYVDRVIAPLWDRGYRGFFLDTLDSYQLVAKDDAARAAQEAGMVRVIRAIKARYPEAKLI 190 Query: 204 LNRGFELLPEIAPLTYAVAAESLYRGYDAGRRSYGPVKDNDRAWLMGQMQTARERYHLPV 263 NRGFE+LP++ L YAVA ESLYR +D G + Y V D DRAWLMGQ + ++ YHLPV Sbjct: 191 FNRGFEILPQVHDLAYAVAFESLYRAWDQGNKQYREVNDADRAWLMGQARKIQDEYHLPV 250 Query: 264 IAIDYVDPQQSGARALARETAQKISADGFIPWVADGGLVSMGVSSVELVPRNVLVLLDVA 323 I+IDY P RA ARETA++I A G IP+V D L ++GV +E++PR VL+L D A Sbjct: 251 ISIDYCPPAD---RACARETAKRIKAQGLIPYVTDPALSTIGVGRIEVLPRKVLILQDRA 307 Query: 324 EGDDLHTTEAQRFLGIQLNHLGLRYEFRDVGREGLPTEPLAGRYAGVVTWFRSGTNHQ-- 381 G D+ T+E RFL + LN LG ++ D+ + LP + RYAGVV W SG Q Sbjct: 308 PGTDIDTSEGVRFLAMPLNFLGYDVDYADLNQP-LPADVPPDRYAGVVVWVNSGPVRQAA 366 Query: 382 RLGPWIGQRIKEGVPVAIFSAFGFQMTKLSAGMLGLTSFSAPVPEQLDVTHYDPELMGFE 441 L W+ QRI +GV +A + G MLGL L V D ++GFE Sbjct: 367 ALTSWVRQRIHDGVRIAFMNELGLPADGSVTDMLGLQLVRGHATGPLSVVSQD-RIVGFE 425 Query: 442 TRPRVDRTQLENVRLSDPAAPVLLRMKDGRDNTYDAAAITPWGGFALAPFAITTAPVIDP 501 PR DR + +R+ LLR+K G D +DAAAIT WGG+ L P+A+ + I+ Sbjct: 426 MAPRPDRRAAQPIRVG-ANGQSLLRLKSG-DFEFDAAAITAWGGYVLNPYAVFSLGTIEQ 483 Query: 502 PRWVLQPMLFLKRALRLPDMAVPDVTTEGGRRIQTSHLDGDGFPSKAEYPGSPFAVEVLQ 561 RWV+QP+ FL+RAL LPDM +PDVTTE GRR+ H+DGDGF S+AE+PG ++ EVL Sbjct: 484 SRWVIQPLEFLRRALALPDMPIPDVTTENGRRLMMVHVDGDGFASRAEFPGPEYSGEVLM 543 Query: 562 REIWDRYRFPVTVSVVEGELSPQGVYPQLSAQTTALARKMFTLPYIEPASHSFSHPFNWA 621 +E+W+RY P T+SV+EGE+ P G+YP+L+ + A+ARKMF LPY+E +H++SHPF W Sbjct: 544 KEVWERYGIPTTLSVIEGEVGPSGLYPKLTPRLEAIARKMFALPYVELGTHTYSHPFKWG 603 Query: 622 DAMHDTRTADITQMDGDASRTLEIPNYKFNLQREIKESMDYINNTLLPPGKKAEVFLWTG 681 + A GDA+ L IP Y+FNL+REI S+ YIN L PP K+ ++ W+G Sbjct: 604 RTLPGA-PAKGQGGGGDAAFALTIPGYQFNLEREIGGSIRYINARLAPPDKRVKIIQWSG 662 Query: 682 NCVPPPEAIAQTYLDGYLNMNGGDTMITKSRNTWTDIAAQGVRK-QGWYQVFAPNQDENV 740 +C PP A+ + G +N+NGGDT IT+S +WT+IAA G+ K G YQVFAPNQ+ENV Sbjct: 663 DCRPPELAVRMAWDAGVVNINGGDTTITRSSPSWTEIAALGIDKGPGAYQVFAPNQNENV 722 Query: 741 YTGNWTGPFYGFERAIESYELTGEPVRFKAVDIYYHFYAGTKPASVAALHKIHRWAQAQP 800 YT +WTGP+YGF+R IE+ ++T P RFK +++YYH Y+GTK ASV AL ++ +A +QP Sbjct: 723 YTNDWTGPYYGFDRLIETLQMTDTPYRFKPINLYYHMYSGTKLASVKALKTVYDYALSQP 782 Query: 801 FTRLYVSQYIRKVIDFENTSIARTADGALVYRTGAHLRTLR-LPPG 845 +Y ++Y+ KV+DF + ++AR + A + R LR LR + PG Sbjct: 783 VLPVYATEYVAKVLDFRDMAVARDGE-AWIVRGNGDLRELRWMAPG 827 >Q0JZ38.1 Q0JZ38_CUPNH Putative uncharacterized protein h16_B2204 Length = 968 Score = 743 bits (1919), Expect = 0.0, Method: Compositional matrix adjust. Identities = 423/910 (46%), Positives = 560/910 (61%), Gaps = 36/910 (3%) Query: 54 SAAFYYGVNPPLADLQAFDVAVVEPEFVRNPAARTRAAADGMHQLFAYVSLGEVQPSRPY 113 S A +YG PP+ LQAFD+AVVEP+ +P R AA FAYVS+GEV SR Y Sbjct: 45 SIALHYGAKPPVDALQAFDIAVVEPDSGFDP----RQAATPATAWFAYVSVGEVLESRAY 100 Query: 114 YKQLPPGLLRGDNAAWGSRVIDQNAPGWRDFFLDKIIAPLWAQGWRGFFLDTLDSYQLFA 173 +K +P G N AW + VIDQ A GW F++DK+IAPLW +G+RGFFLDTLDSYQL A Sbjct: 101 FKDIPKAWFVGRNDAWNAPVIDQAADGWPAFYVDKVIAPLWQRGFRGFFLDTLDSYQLAA 160 Query: 174 KTDAERAVQTQAMIATLREFKRRYPEAKLILNRGFELLPEIAPLTYAVAAESLYRGYDAG 233 +TDAERA Q ++ +R K RYPEA+L+ NRGFE+LP++ L YAVA ESL+RG++ Sbjct: 161 RTDAERARQEAGLVRVIRAIKARYPEARLVFNRGFEILPQVHDLAYAVAFESLFRGWNQA 220 Query: 234 RRSYGPVKDNDRAWLMGQMQTARERYHLPVIAIDYVDPQQSGARALARETAQKISADGFI 293 + Y V DR WL+ Q +T RE+Y LPVI+IDY P R ARETAQ+I A G Sbjct: 221 QGRYVDVAQADRDWLLAQARTIREQYRLPVISIDYCPPAD---RRCARETAQRIRALGIT 277 Query: 294 PWVADGGLVSMGVSSVELVPRNVLVLLDVAEGDDLHTTEAQRFLGIQLNHLGLRYEFRDV 353 P+VAD GL ++G+ VE++PR VLV+ + G + +E RF+ + LN+LG R +F + Sbjct: 278 PYVADPGLQTVGIGKVEVLPRRVLVVQERRPGVSIDDSEGVRFVSMPLNYLGYRVDFAET 337 Query: 354 GREGLPTEPLAGRYAGVVTWFRSGTNHQ--RLGPWIGQRIKEGVPVAIFSAFGFQMTKLS 411 E LP E RYAGVV + Q R W+ R+ +G+PV + FG ++ Sbjct: 338 S-EDLP-EIGPDRYAGVVVYLSGNVTAQPGRFHAWVQARMAQGMPVVFLNDFGTSVSGTV 395 Query: 412 AGMLGLTSFSAPVPEQLDVTHYDPELMGFETRPRVDRTQLENVRLSDPAA-PVLLRMKDG 470 A GL + V ++V D +MGFE DRTQ E +++ D A LLR++ G Sbjct: 396 ARSFGLKAVKGRVSGPVEVLAKD-RMMGFEMPVAPDRTQAEAIQVPDGAGYRSLLRLRSG 454 Query: 471 RDNTYDAAAITPWGGFALAPFAITTAPVID-PPRWVLQPMLFLKRALRLPDMAVPDVTTE 529 TYDAAAITPWGG+ L P+A+ + + RWV+QP+ FL+ ALRLP M VPDVTTE Sbjct: 455 -TLTYDAAAITPWGGYVLGPYAVRQSGNGNGQSRWVVQPLDFLRAALRLPAMPVPDVTTE 513 Query: 530 GGRRIQTSHLDGDGFPSKAEYPGSPFAVEVLQREIWDRYRFPVTVSVVEGELSPQGVYPQ 589 GRR+ T H+DGDGF S+AE PG F+ EVL REI+DRYR P+T+SV++GE+S G+YP+ Sbjct: 514 NGRRLLTIHIDGDGFASRAEIPGGGFSGEVLFREIFDRYRLPMTMSVIQGEVSKDGMYPR 573 Query: 590 LSAQTTALARKMFTLPYIEPASHSFSHPFNWADAM-----HDTRTADITQMDGDASRTLE 644 LSA+ +ARK+F PY+E ASH+FSHPF W+ + T+++ ++GD + L Sbjct: 574 LSAELEPIARKIFAQPYVEVASHTFSHPFEWSRTVPAQPGQPTQSSGAAVVEGDEAFHLS 633 Query: 645 IPNYKFNLQREIKESMDYINNTLLPPGKKAEVFLWTGNCVPPPEAIAQTYLDGYLNMNGG 704 IP Y +L REI S+DYIN TL P GK + LW+G+C PP EA+ T LNMNGG Sbjct: 634 IPGYSMDLNREIGGSIDYINRTLAPAGKPVSMLLWSGDCQPPAEALRLTEKARVLNMNGG 693 Query: 705 DTMITKSRNTWTDIAAQGVRKQGW-YQVFAPNQDENVYTGNWTGPFYGFERAIESYELTG 763 DT+IT+S +W IA G+ K G +QVFAPNQ+ENVYT W GPFYGFER IE+YELT Sbjct: 694 DTLITRSNPSWIAIAPLGINKPGGTFQVFAPNQNENVYTNLWHGPFYGFERVIETYELTD 753 Query: 764 EPVRFKAVDIYYHFYAGTKPASVAALHKIHRWAQAQPFTRLYVSQYIRKVIDFENTSIAR 823 +P RFK V+IYYH Y+GTK AS+ AL K++ + AQP L+ + Y+RKV+D+++ ++AR Sbjct: 754 KPYRFKPVNIYYHSYSGTKAASLKALRKVYDYVLAQPLLPLHSTDYVRKVLDWQDMAVAR 813 Query: 824 -TADG-------ALVYRTGAHLRTLRLP-PGTPDYDLSAPGIAGIAPGPSGR-YLITSAA 873 DG + R +LR LR G PD +A G+ G +P P G YL Sbjct: 814 DVGDGQPGGTGAEWIVRGDGNLRNLRWSGAGMPDVG-AAHGVTGTSPAPGGGVYLHLDGG 872 Query: 874 EVRLKPPAQPAAQALPMLLEAGGQVGDFQRSVNGNKVELRFSLLANGPSTFSVAGARSCS 933 + R A A P L EA G V R + RF+ F +A A +C Sbjct: 873 DARFAVRDTVTAPAAPQLAEANGIV----REWSQRDGVTRFAFSGYFKPFFRLANAGNCR 928 Query: 934 ASADGAALPA 943 S DG + A Sbjct: 929 VSVDGKPVQA 938 >B2U9H1.1 B2U9H1_RALPJ TM1410 hypothetical-related protein Length = 980 Score = 738 bits (1905), Expect = 0.0, Method: Compositional matrix adjust. Identities = 412/926 (44%), Positives = 562/926 (60%), Gaps = 33/926 (3%) Query: 27 TLAAAAGALLTGSAPAQGTVGTAPAPTSAAFYYGVNPPLADLQAFDVAVVEPEFVRNPAA 86 TLA A A TGS + T + + A++YG PP+A L+AFD VVEP+ +P+ Sbjct: 40 TLAQQAPAT-TGSGASGVTASVSVNAPNIAWFYGDKPPVAQLRAFDAVVVEPDHGFDPSQ 98 Query: 87 RTRAAADGMHQLFAYVSLGEVQPSRPYYKQLPPGLLRGDNAAWGSRVIDQNAPGWRDFFL 146 Q +AYVS+GEV P R +YK LP L G N AW SRV+DQ P W F++ Sbjct: 99 FKTPKT----QWYAYVSVGEVTPERRWYKDLPKTWLLGRNEAWASRVVDQTQPEWPAFYV 154 Query: 147 DKIIAPLWAQGWRGFFLDTLDSYQLFAKTDAERAVQTQAMIATLREFKRRYPEAKLILNR 206 D +I PLW +G+RGFFLDTLDSYQL AK DA RA Q M+ +R K RYPEA+LI NR Sbjct: 155 DHVIKPLWDKGYRGFFLDTLDSYQLVAKDDASRAAQEAGMVRVIRAIKARYPEARLIFNR 214 Query: 207 GFELLPEIAPLTYAVAAESLYRGYDAGRRSYGPVKDNDRAWLMGQMQTARERYHLPVIAI 266 GFE+LP++ L YAVA ESLYRG+D G + Y V D DR WLMG ++ R+ Y LPVIAI Sbjct: 215 GFEILPQVHDLAYAVAFESLYRGWDQGSKQYKQVNDADREWLMGHVRKIRDEYRLPVIAI 274 Query: 267 DYVDPQQSGARALARETAQKISADGFIPWVADGGLVSMGVSSVELVPRNVLVLLDVAEGD 326 DY P RA ARETA++I A G +P+V D L ++GV +E++PR VL+L D Sbjct: 275 DYCPPTD---RACARETAKRIKAQGVVPYVTDPDLSTIGVGRIEVLPRKVLILQDRDPRT 331 Query: 327 DLHTTEAQRFLGIQLNHLGLRYEFRDVGREGLPTEPLAGRYAGVVTWFRSGTNHQ--RLG 384 + T+E RF+ LN LG E+ D+ + LP RYAGVV W + Q L Sbjct: 332 TIDTSEGVRFVATPLNFLGYDVEYADINKP-LPAAVPPDRYAGVVVWVNTSPIKQVAALS 390 Query: 385 PWIGQRIKEGVPVAIFSAFGFQMTKLSAGMLGLTSFSAPVPEQLDVTHYDPELMGFETRP 444 W+ QRI +GV +A + FG + A M L L V D ++MGFE P Sbjct: 391 SWVRQRIHDGVHIAFLNQFGLPVDGSMADMFKLQLVRGRATGPLSVVSQD-KMMGFEMAP 449 Query: 445 RVDRTQLENVRLSDPAAPVLLRMKDGRDNTYDAAAITPWGGFALAPFAITTAPVIDPPRW 504 + +R + + +++S LLR+K G + +DAAAIT WGG+ L P+A+ + ++ RW Sbjct: 450 QPERREAQPIQVS-ANGQSLLRLKSG-NFEFDAAAITDWGGYVLNPYAVFSMDTVEQARW 507 Query: 505 VLQPMLFLKRALRLPDMAVPDVTTEGGRRIQTSHLDGDGFPSKAEYPGSPFAVEVLQREI 564 V+QP+ FL+RAL LPDM +PDVT+E GRR+ H+DGDGF S+AE+PG ++ E L +++ Sbjct: 508 VVQPIEFLRRALALPDMPIPDVTSENGRRLMLVHVDGDGFASRAEFPGPEYSGEALLQDV 567 Query: 565 WDRYRFPVTVSVVEGELSPQGVYPQLSAQTTALARKMFTLPYIEPASHSFSHPFNWADAM 624 W++YR P T+S++EGE+ G+YP+L+ + A+AR+MF LPY+E +H++SHPF+W+ + Sbjct: 568 WEKYRIPTTLSIIEGEVGASGLYPKLTPRLEAIARQMFALPYVELGTHTYSHPFDWSRTV 627 Query: 625 ---HDTRTADITQMD---GDASRTLEIPNYKFNLQREIKESMDYINNTLLPPGKKAEVFL 678 RT + D GD + L IP YKF+L REI S++YIN L PPGK+ ++ Sbjct: 628 PGAAGDRTKEGPGADKGGGDTAFALSIPGYKFSLDREISGSINYINARLAPPGKRVKLLQ 687 Query: 679 WTGNCVPPPEAIAQTYLDGYLNMNGGDTMITKSRNTWTDIAAQGVRKQ-GWYQVFAPNQD 737 W+G+C PP A+ + G LN+NGGDT IT+S +WT+IA G+ K G YQVFAPNQ+ Sbjct: 688 WSGDCQPPEIAVRMAWDAGVLNLNGGDTTITRSSPSWTEIAPLGIDKGPGAYQVFAPNQN 747 Query: 738 ENVYTGNWTGPFYGFERAIESYELTGEPVRFKAVDIYYHFYAGTKPASVAALHKIHRWAQ 797 ENVYT +WTGPFYGF+R IE+ +LT P RFK ++IYYH Y+GTK AS+ AL K++ +A Sbjct: 748 ENVYTNDWTGPFYGFDRLIETLQLTDTPYRFKPINIYYHMYSGTKLASLKALKKVYDYAL 807 Query: 798 AQPFTRLYVSQYIRKVIDFENTSIAR-TADG-ALVYRTGAHLRTLR-LPPGTPDYDLSAP 854 ++P +Y ++Y+ KV+DF N +IAR DG + R LR LR + GTP A Sbjct: 808 SRPVFPIYSTEYVVKVLDFRNMAIAREVGDGNTWLVRGDGDLRELRWMARGTPRM-ADAQ 866 Query: 855 GIAGIAPGPSGRY--LITSAAEVRLKPPAQPAAQALPMLLEAGGQVGDFQRSVNGNKVEL 912 G+ G G Y L AA L P A+ + A + EA V +F R NGN L Sbjct: 867 GVVGYDKAAGGIYIHLDDGAARFTLAPEAESSKPA--YIAEAAAFVRNFAR--NGNA--L 920 Query: 913 RFSLLANGPSTFSVAGARSCSASADG 938 F +A A +C +G Sbjct: 921 SFEAGGYYKPFVRLANAGACRVKVNG 946