BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0031.0163.p (190 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value D8ITJ9.1 D8ITJ9_HERSS Cytochrome C oxidase assembly transmembran... 396 e-109 A6T2U3.1 A6T2U3_JANMA Cytochrome c oxidase subunit XI assembly p... 281 3e-74 A4G942.1 A4G942_HERAR Cytochrome c oxidase assembly protein CtaG 273 8e-72 D8NZB3.1 D8NZB3_RALSO Cytochrome c oxidase assembly protein CtaG... 257 5e-67 B5S855.1 B5S855_RALSO Cytochrome c oxidase assembly protein 256 1e-66 Q8Y2H1.1 Q8Y2H1_RALSO Probable cytochrome c oxidase assembly tra... 256 1e-66 D8NQ36.1 D8NQ36_RALSO Cytochrome c oxidase assembly protein CtaG... 256 1e-66 B5SFI4.1 B5SFI4_RALSO Cytochrome c oxidase assembly protein 256 1e-66 A3RS99.1 A3RS99_RALSO CtaG 256 1e-66 D8N8Q4.1 D8N8Q4_RALSO Cytochrome c oxidase assembly protein CtaG... 255 2e-66 >D8ITJ9.1 D8ITJ9_HERSS Cytochrome C oxidase assembly transmembrane protein Length = 190 Score = 396 bits (1017), Expect = e-109, Method: Compositional matrix adjust. Identities = 190/190 (100%), Positives = 190/190 (100%) Query: 1 MSQHDDPLQDQEERGLNRVMLRKLLVVAVLMFGFGYALIPVYRKICEVTGVNFLTPKDVT 60 MSQHDDPLQDQEERGLNRVMLRKLLVVAVLMFGFGYALIPVYRKICEVTGVNFLTPKDVT Sbjct: 1 MSQHDDPLQDQEERGLNRVMLRKLLVVAVLMFGFGYALIPVYRKICEVTGVNFLTPKDVT 60 Query: 61 VEAPANTQIDKSRTITVEFDGNAQGPWRFRPTVTSMQVHPGEMTQVTYEVVNTQSRNVDA 120 VEAPANTQIDKSRTITVEFDGNAQGPWRFRPTVTSMQVHPGEMTQVTYEVVNTQSRNVDA Sbjct: 61 VEAPANTQIDKSRTITVEFDGNAQGPWRFRPTVTSMQVHPGEMTQVTYEVVNTQSRNVDA 120 Query: 121 QAIPSYAPQQSAAFFKKVECFCFTQQTLGPNQAKQMPVVFYIDPKLPKDVTTITLSYTFF 180 QAIPSYAPQQSAAFFKKVECFCFTQQTLGPNQAKQMPVVFYIDPKLPKDVTTITLSYTFF Sbjct: 121 QAIPSYAPQQSAAFFKKVECFCFTQQTLGPNQAKQMPVVFYIDPKLPKDVTTITLSYTFF 180 Query: 181 EINGKDKTAG 190 EINGKDKTAG Sbjct: 181 EINGKDKTAG 190 >A6T2U3.1 A6T2U3_JANMA Cytochrome c oxidase subunit XI assembly protein Length = 199 Score = 281 bits (719), Expect = 3e-74, Method: Compositional matrix adjust. Identities = 128/185 (69%), Positives = 156/185 (84%) Query: 5 DDPLQDQEERGLNRVMLRKLLVVAVLMFGFGYALIPVYRKICEVTGVNFLTPKDVTVEAP 64 ++ +DQ+ LN M KL+V+AV+MFGFGY L+P+Y++ICE+TGVN LT +++ V+ Sbjct: 2 ENQTEDQKHSKLNTQMFGKLVVIAVMMFGFGYLLVPIYKQICEITGVNILTSQEMKVKPI 61 Query: 65 ANTQIDKSRTITVEFDGNAQGPWRFRPTVTSMQVHPGEMTQVTYEVVNTQSRNVDAQAIP 124 N+Q+DKSRTITVEFD N QGP+RFRPTV SMQVHPGEM Q+ YEVVNTQ+R+V+AQAIP Sbjct: 62 DNSQVDKSRTITVEFDANTQGPFRFRPTVNSMQVHPGEMAQIVYEVVNTQARSVEAQAIP 121 Query: 125 SYAPQQSAAFFKKVECFCFTQQTLGPNQAKQMPVVFYIDPKLPKDVTTITLSYTFFEING 184 SYAPQQ+AA FKKVECFCF QQTL +QAKQMPVVFY+DP LPKDV TITLSYTFFEI G Sbjct: 122 SYAPQQAAAHFKKVECFCFQQQTLEASQAKQMPVVFYLDPALPKDVKTITLSYTFFEIAG 181 Query: 185 KDKTA 189 ++K A Sbjct: 182 REKKA 186 >A4G942.1 A4G942_HERAR Cytochrome c oxidase assembly protein CtaG Length = 192 Score = 273 bits (698), Expect = 8e-72, Method: Compositional matrix adjust. Identities = 127/181 (70%), Positives = 152/181 (83%) Query: 9 QDQEERGLNRVMLRKLLVVAVLMFGFGYALIPVYRKICEVTGVNFLTPKDVTVEAPANTQ 68 Q + LN M KL V+AV+MFGFGY L+P+Y++ICE+TGVN LT +++ V+ N+Q Sbjct: 4 QTESTGKLNGRMFGKLAVIAVMMFGFGYLLVPIYKQICELTGVNILTSQEMKVKPIDNSQ 63 Query: 69 IDKSRTITVEFDGNAQGPWRFRPTVTSMQVHPGEMTQVTYEVVNTQSRNVDAQAIPSYAP 128 IDKSRTITVEFD N GP+RFRPTV+SMQVHPGEM+QV YEVVNTQ+R+V+AQAIPSYAP Sbjct: 64 IDKSRTITVEFDANTTGPFRFRPTVSSMQVHPGEMSQVLYEVVNTQARSVEAQAIPSYAP 123 Query: 129 QQSAAFFKKVECFCFTQQTLGPNQAKQMPVVFYIDPKLPKDVTTITLSYTFFEINGKDKT 188 QQ+AA FKKVECFCF Q+TLGPNQAKQMPVVFY+DP LP+DV TITLSYTFFE+ +K Sbjct: 124 QQAAAHFKKVECFCFQQETLGPNQAKQMPVVFYLDPALPRDVKTITLSYTFFEVAKPEKQ 183 Query: 189 A 189 A Sbjct: 184 A 184 >D8NZB3.1 D8NZB3_RALSO Cytochrome c oxidase assembly protein CtaG/Cox11 Length = 202 Score = 257 bits (657), Expect = 5e-67, Method: Compositional matrix adjust. Identities = 118/179 (65%), Positives = 145/179 (81%), Gaps = 2/179 (1%) Query: 6 DPLQDQE--ERGLNRVMLRKLLVVAVLMFGFGYALIPVYRKICEVTGVNFLTPKDVTVEA 63 DP D + ERGLNR ML KL VV V+MFGFGYA++P+Y+KICEVT +N LT +D+ A Sbjct: 9 DPTDDAKVAERGLNRAMLGKLAVVVVMMFGFGYAMVPLYKKICEVTNINVLTTRDLDGGA 68 Query: 64 PANTQIDKSRTITVEFDGNAQGPWRFRPTVTSMQVHPGEMTQVTYEVVNTQSRNVDAQAI 123 NTQ+D++RT+TVEFD N+QGP+RFRP SM+VHPGE+ Q+ YEVVN + R+V AQAI Sbjct: 69 LRNTQVDQARTVTVEFDSNSQGPFRFRPVKNSMEVHPGEINQIVYEVVNKEGRSVSAQAI 128 Query: 124 PSYAPQQSAAFFKKVECFCFTQQTLGPNQAKQMPVVFYIDPKLPKDVTTITLSYTFFEI 182 PSYAP+Q+ FFKK+ECFCF QQTL N++++MPVVF IDP LPKDV TITLSYTFFEI Sbjct: 129 PSYAPKQATEFFKKIECFCFKQQTLAGNESREMPVVFVIDPNLPKDVKTITLSYTFFEI 187 >B5S855.1 B5S855_RALSO Cytochrome c oxidase assembly protein Length = 202 Score = 256 bits (654), Expect = 1e-66, Method: Compositional matrix adjust. Identities = 118/180 (65%), Positives = 144/180 (80%), Gaps = 2/180 (1%) Query: 6 DPLQDQE--ERGLNRVMLRKLLVVAVLMFGFGYALIPVYRKICEVTGVNFLTPKDVTVEA 63 DP D + ERGLNR ML KL VV V+MFGFGYA++P+Y+KICEVT +N LT +D+ A Sbjct: 9 DPTDDTKIAERGLNRAMLGKLAVVVVMMFGFGYAMVPLYKKICEVTNINVLTTRDLDGGA 68 Query: 64 PANTQIDKSRTITVEFDGNAQGPWRFRPTVTSMQVHPGEMTQVTYEVVNTQSRNVDAQAI 123 NTQ+D++RT+TVEFD N+QGP+RFRP SM+VHPGE+ Q+ YEVVN + R V AQAI Sbjct: 69 LRNTQVDQARTVTVEFDSNSQGPFRFRPVRNSMEVHPGEINQIVYEVVNKEGRQVSAQAI 128 Query: 124 PSYAPQQSAAFFKKVECFCFTQQTLGPNQAKQMPVVFYIDPKLPKDVTTITLSYTFFEIN 183 PSYAP+Q+ FFKK+ECFCF QQTL N++++MPVVF IDP LPKDV TITLSYTFFEI Sbjct: 129 PSYAPKQATEFFKKIECFCFKQQTLAGNESREMPVVFVIDPDLPKDVKTITLSYTFFEIG 188 >Q8Y2H1.1 Q8Y2H1_RALSO Probable cytochrome c oxidase assembly transmembrane protein Length = 202 Score = 256 bits (653), Expect = 1e-66, Method: Compositional matrix adjust. Identities = 117/180 (65%), Positives = 144/180 (80%), Gaps = 2/180 (1%) Query: 6 DPLQDQE--ERGLNRVMLRKLLVVAVLMFGFGYALIPVYRKICEVTGVNFLTPKDVTVEA 63 DP D ERGLNR ML KL VV V+MFGFGYA++P+Y+KICE+T +N LT +D+ A Sbjct: 9 DPTDDARAAERGLNRAMLGKLAVVVVMMFGFGYAMVPLYKKICELTNINVLTTRDLDGGA 68 Query: 64 PANTQIDKSRTITVEFDGNAQGPWRFRPTVTSMQVHPGEMTQVTYEVVNTQSRNVDAQAI 123 NTQ+D++RT+TVEFD N+QGP+RFRP SM+VHPGE+ Q+ YEVVN + R+V AQAI Sbjct: 69 LRNTQVDQARTVTVEFDSNSQGPFRFRPVKNSMEVHPGEINQIVYEVVNKEGRSVSAQAI 128 Query: 124 PSYAPQQSAAFFKKVECFCFTQQTLGPNQAKQMPVVFYIDPKLPKDVTTITLSYTFFEIN 183 PSYAP+Q+ FFKK+ECFCF QQTL N++++MPVVF IDP LPKDV TITLSYTFFEI Sbjct: 129 PSYAPKQATEFFKKIECFCFKQQTLAGNESREMPVVFVIDPDLPKDVKTITLSYTFFEIG 188 >D8NQ36.1 D8NQ36_RALSO Cytochrome c oxidase assembly protein CtaG/Cox11 Length = 202 Score = 256 bits (653), Expect = 1e-66, Method: Compositional matrix adjust. Identities = 118/180 (65%), Positives = 144/180 (80%), Gaps = 2/180 (1%) Query: 6 DPLQDQE--ERGLNRVMLRKLLVVAVLMFGFGYALIPVYRKICEVTGVNFLTPKDVTVEA 63 DP D + ERGLNR ML KL VV V+MFGFGYA++P+Y+KICEVT +N LT +D+ A Sbjct: 9 DPSDDTKTAERGLNRAMLGKLAVVVVMMFGFGYAMVPLYKKICEVTNINVLTTRDLDGGA 68 Query: 64 PANTQIDKSRTITVEFDGNAQGPWRFRPTVTSMQVHPGEMTQVTYEVVNTQSRNVDAQAI 123 NTQ+D++RT+TVEFD N+QGP+RFRP SM+VHPGE+ Q+ YEVVN + R V AQAI Sbjct: 69 LRNTQVDQARTVTVEFDSNSQGPFRFRPVRNSMEVHPGEINQIVYEVVNKEGRQVSAQAI 128 Query: 124 PSYAPQQSAAFFKKVECFCFTQQTLGPNQAKQMPVVFYIDPKLPKDVTTITLSYTFFEIN 183 PSYAP+Q+ FFKK+ECFCF QQTL N++++MPVVF IDP LPKDV TITLSYTFFEI Sbjct: 129 PSYAPKQATEFFKKIECFCFKQQTLAGNESREMPVVFVIDPDLPKDVKTITLSYTFFEIG 188 >B5SFI4.1 B5SFI4_RALSO Cytochrome c oxidase assembly protein Length = 202 Score = 256 bits (653), Expect = 1e-66, Method: Compositional matrix adjust. Identities = 117/180 (65%), Positives = 144/180 (80%), Gaps = 2/180 (1%) Query: 6 DPLQDQE--ERGLNRVMLRKLLVVAVLMFGFGYALIPVYRKICEVTGVNFLTPKDVTVEA 63 DP D + ERGLNR ML KL VV V+MFGFGYA++P+Y+KICE+T +N LT +D+ A Sbjct: 9 DPTDDTKTAERGLNRAMLGKLAVVVVMMFGFGYAMVPLYKKICEITNINVLTTRDLDGGA 68 Query: 64 PANTQIDKSRTITVEFDGNAQGPWRFRPTVTSMQVHPGEMTQVTYEVVNTQSRNVDAQAI 123 NTQ+D++RT+TVEFD N+QGP+RFRP SM+VHPGE+ Q+ YEVVN + R V AQAI Sbjct: 69 LRNTQVDQARTVTVEFDSNSQGPFRFRPVRNSMEVHPGEINQIVYEVVNKEGRQVSAQAI 128 Query: 124 PSYAPQQSAAFFKKVECFCFTQQTLGPNQAKQMPVVFYIDPKLPKDVTTITLSYTFFEIN 183 PSYAP+Q+ FFKK+ECFCF QQTL N++++MPVVF IDP LPKDV TITLSYTFFEI Sbjct: 129 PSYAPKQATEFFKKIECFCFKQQTLAGNESREMPVVFVIDPDLPKDVKTITLSYTFFEIG 188 >A3RS99.1 A3RS99_RALSO CtaG Length = 202 Score = 256 bits (653), Expect = 1e-66, Method: Compositional matrix adjust. Identities = 117/180 (65%), Positives = 144/180 (80%), Gaps = 2/180 (1%) Query: 6 DPLQDQE--ERGLNRVMLRKLLVVAVLMFGFGYALIPVYRKICEVTGVNFLTPKDVTVEA 63 DP D + ERGLNR ML KL VV V+MFGFGYA++P+Y+KICE+T +N LT +D+ A Sbjct: 9 DPTDDTKTAERGLNRAMLGKLAVVVVMMFGFGYAMVPLYKKICEITNINVLTTRDLDGGA 68 Query: 64 PANTQIDKSRTITVEFDGNAQGPWRFRPTVTSMQVHPGEMTQVTYEVVNTQSRNVDAQAI 123 NTQ+D++RT+TVEFD N+QGP+RFRP SM+VHPGE+ Q+ YEVVN + R V AQAI Sbjct: 69 LRNTQVDQARTVTVEFDSNSQGPFRFRPVRNSMEVHPGEINQIVYEVVNKEGRQVSAQAI 128 Query: 124 PSYAPQQSAAFFKKVECFCFTQQTLGPNQAKQMPVVFYIDPKLPKDVTTITLSYTFFEIN 183 PSYAP+Q+ FFKK+ECFCF QQTL N++++MPVVF IDP LPKDV TITLSYTFFEI Sbjct: 129 PSYAPKQATEFFKKIECFCFKQQTLAGNESREMPVVFVIDPDLPKDVKTITLSYTFFEIG 188 >D8N8Q4.1 D8N8Q4_RALSO Cytochrome c oxidase assembly protein CtaG/Cox11 Length = 202 Score = 255 bits (652), Expect = 2e-66, Method: Compositional matrix adjust. Identities = 116/180 (64%), Positives = 145/180 (80%), Gaps = 2/180 (1%) Query: 6 DPLQDQE--ERGLNRVMLRKLLVVAVLMFGFGYALIPVYRKICEVTGVNFLTPKDVTVEA 63 DP D + ERGLNR ML KL VV V+MFGFGYA++P+Y+KICE+T +N LT +D+ A Sbjct: 9 DPTDDAKAAERGLNRAMLGKLAVVVVMMFGFGYAMVPLYKKICELTNINVLTTRDLDGGA 68 Query: 64 PANTQIDKSRTITVEFDGNAQGPWRFRPTVTSMQVHPGEMTQVTYEVVNTQSRNVDAQAI 123 NTQ+D++RT+TVEFD N+QGP+RFRP SM+VHPGE+ Q+ YEVVN + R+V AQAI Sbjct: 69 LRNTQVDQARTVTVEFDSNSQGPFRFRPVKNSMEVHPGEINQIVYEVVNKEGRSVSAQAI 128 Query: 124 PSYAPQQSAAFFKKVECFCFTQQTLGPNQAKQMPVVFYIDPKLPKDVTTITLSYTFFEIN 183 PSYAP+Q+ FFKK+ECFCF QQTL N++++MPVVF IDP LPKDV TITLSYTFFE+ Sbjct: 129 PSYAPKQATEFFKKIECFCFKQQTLAGNESREMPVVFVIDPDLPKDVKTITLSYTFFEVG 188