BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0031.0131.p (250 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value D8ITG7.1 D8ITG7_HERSS Phenylacetic acid degradation protein 513 e-144 B3RBC7.1 B3RBC7_CUPTR Subunit of multicomponent oxygenase, pheny... 372 e-101 Q46UT9.1 Q46UT9_CUPPJ Phenylacetate-CoA oxygenase, PaaI subunit 370 e-100 Q0K1H4.1 Q0K1H4_CUPNH Phenylacetic acid degradation protein C 358 4e-97 Q5NZZ0.1 Q5NZZ0_AROAE Similar to aerobic phenylacetate degradati... 335 2e-90 E5UC59.1 E5UC59_ALCXX Phenylacetic acid degradation protein 332 4e-89 Q2L2P0.1 Q2L2P0_BORA1 Phenylacetic acid degradation protein 323 2e-86 A9IJQ1.1 A9IJQ1_BORPD Phenylacetic acid degradation protein 320 1e-85 Q7WGX8.1 Q7WGX8_BORBR Phenylacetic acid degradation protein 320 2e-85 Q7W9S9.1 Q7W9S9_BORPA Phenylacetic acid degradation protein 320 2e-85 >D8ITG7.1 D8ITG7_HERSS Phenylacetic acid degradation protein Length = 250 Score = 513 bits (1322), Expect = e-144, Method: Compositional matrix adjust. Identities = 250/250 (100%), Positives = 250/250 (100%) Query: 1 MTQKTDYVRRLGDNVLVLSQRLTEWCGKGPALEEDMALINVSLDLIGQARLWLSYAAELE 60 MTQKTDYVRRLGDNVLVLSQRLTEWCGKGPALEEDMALINVSLDLIGQARLWLSYAAELE Sbjct: 1 MTQKTDYVRRLGDNVLVLSQRLTEWCGKGPALEEDMALINVSLDLIGQARLWLSYAAELE 60 Query: 61 GQGRNEDQLAFLRDAHQFHNLLLVELPNGSYADTLARQFLFDVWHYFLLEGLCQSSDARI 120 GQGRNEDQLAFLRDAHQFHNLLLVELPNGSYADTLARQFLFDVWHYFLLEGLCQSSDARI Sbjct: 61 GQGRNEDQLAFLRDAHQFHNLLLVELPNGSYADTLARQFLFDVWHYFLLEGLCQSSDARI 120 Query: 121 AEIAQKCFKEVTYHVRRSTDLMIRLGDGTEDSHRRMQAAIDALWMYTGELFVADALDQAM 180 AEIAQKCFKEVTYHVRRSTDLMIRLGDGTEDSHRRMQAAIDALWMYTGELFVADALDQAM Sbjct: 121 AEIAQKCFKEVTYHVRRSTDLMIRLGDGTEDSHRRMQAAIDALWMYTGELFVADALDQAM 180 Query: 181 QEQGVATALGEVQQKWTQHVTDVLLEATLKVPPAGLWMQSGGKAGRHTEHLGYLLAEMQF 240 QEQGVATALGEVQQKWTQHVTDVLLEATLKVPPAGLWMQSGGKAGRHTEHLGYLLAEMQF Sbjct: 181 QEQGVATALGEVQQKWTQHVTDVLLEATLKVPPAGLWMQSGGKAGRHTEHLGYLLAEMQF 240 Query: 241 LQRAYPGAQW 250 LQRAYPGAQW Sbjct: 241 LQRAYPGAQW 250 >B3RBC7.1 B3RBC7_CUPTR Subunit of multicomponent oxygenase, phenylacetic acid degradation; ring-hydroxylating complex protein 3 Length = 250 Score = 372 bits (955), Expect = e-101, Method: Compositional matrix adjust. Identities = 181/249 (72%), Positives = 205/249 (82%), Gaps = 1/249 (0%) Query: 2 TQKTDYVRRLGDNVLVLSQRLTEWCGKGPALEEDMALINVSLDLIGQARLWLSYAAELEG 61 K +Y+ RLGD+ LVL QRL+EWCG+GPALEED+AL NV+LDLIGQ RLWL YAAE+EG Sbjct: 3 NHKLEYLLRLGDSTLVLGQRLSEWCGRGPALEEDIALTNVALDLIGQTRLWLGYAAEVEG 62 Query: 62 QGRNEDQLAFLRDAHQFHNLLLVELPNGSYADTLARQFLFDVWHYFLLEGLCQSSDARIA 121 GR D LAFLRDAHQF NLLLVE PNGSYADTLARQFLFD WHYF LE L +S+DARIA Sbjct: 63 AGRTADHLAFLRDAHQFRNLLLVEQPNGSYADTLARQFLFDTWHYFQLEALQRSTDARIA 122 Query: 122 EIAQKCFKEVTYHVRRSTDLMIRLGDGTEDSHRRMQAAIDALWMYTGELFVADALDQAMQ 181 EIA K KEVTYHVRRS DL++RLGDG+E+SHRRMQ A D LWM+TGELF ADA + A+ Sbjct: 123 EIAAKSLKEVTYHVRRSADLVVRLGDGSEESHRRMQDAFDDLWMFTGELFEADAAETALA 182 Query: 182 EQGVATALGEVQQKWTQHVTDVLLEATLKVPPAGLWMQSGGKAGRHTEHLGYLLAEMQFL 241 +GV A G + + W +HV +VL EATL+V PAG W QSGG+ GRHTEHLGYLLAEMQFL Sbjct: 183 NEGVIPAPGTLAEPWQRHVGEVLEEATLRV-PAGQWAQSGGRHGRHTEHLGYLLAEMQFL 241 Query: 242 QRAYPGAQW 250 QRAYPGAQW Sbjct: 242 QRAYPGAQW 250 >Q46UT9.1 Q46UT9_CUPPJ Phenylacetate-CoA oxygenase, PaaI subunit Length = 250 Score = 370 bits (949), Expect = e-100, Method: Compositional matrix adjust. Identities = 179/248 (72%), Positives = 206/248 (83%), Gaps = 1/248 (0%) Query: 3 QKTDYVRRLGDNVLVLSQRLTEWCGKGPALEEDMALINVSLDLIGQARLWLSYAAELEGQ 62 K +Y++RLGD LVL QRL+EWCG+GPALEED+AL NV+LDL+GQ RLWL YAAE+EG Sbjct: 4 HKFEYLQRLGDTTLVLGQRLSEWCGRGPALEEDIALTNVALDLVGQTRLWLGYAAEVEGV 63 Query: 63 GRNEDQLAFLRDAHQFHNLLLVELPNGSYADTLARQFLFDVWHYFLLEGLCQSSDARIAE 122 GRN DQLA+LRDAHQF NLLLVE PNGSYADTLARQFLFD WHYFLLE L S+DARIAE Sbjct: 64 GRNADQLAYLRDAHQFRNLLLVEQPNGSYADTLARQFLFDTWHYFLLERLQHSTDARIAE 123 Query: 123 IAQKCFKEVTYHVRRSTDLMIRLGDGTEDSHRRMQAAIDALWMYTGELFVADALDQAMQE 182 IA K KEVTYHVRRS DL++RLGDGTE+SHRRMQ A D LWM+TGELF +DA + A+ Sbjct: 124 IAAKSLKEVTYHVRRSGDLVVRLGDGTEESHRRMQDAFDDLWMFTGELFESDAAEVALVA 183 Query: 183 QGVATALGEVQQKWTQHVTDVLLEATLKVPPAGLWMQSGGKAGRHTEHLGYLLAEMQFLQ 242 QGVA + + W +HV +VL EATL++ PAG W Q+GG+ GRHTEHLGYLLAEMQFLQ Sbjct: 184 QGVAVDPASLAESWQRHVGEVLEEATLRI-PAGNWSQTGGRQGRHTEHLGYLLAEMQFLQ 242 Query: 243 RAYPGAQW 250 RAYPGA+W Sbjct: 243 RAYPGARW 250 >Q0K1H4.1 Q0K1H4_CUPNH Phenylacetic acid degradation protein C Length = 251 Score = 358 bits (919), Expect = 4e-97, Method: Compositional matrix adjust. Identities = 173/249 (69%), Positives = 202/249 (81%), Gaps = 1/249 (0%) Query: 2 TQKTDYVRRLGDNVLVLSQRLTEWCGKGPALEEDMALINVSLDLIGQARLWLSYAAELEG 61 K +Y+ RLGD LVL QRL+EWCG+GPALEED+AL NV+LDLIGQ RLWL YAAE+EG Sbjct: 4 NHKLEYLLRLGDATLVLGQRLSEWCGRGPALEEDIALTNVALDLIGQTRLWLGYAAEVEG 63 Query: 62 QGRNEDQLAFLRDAHQFHNLLLVELPNGSYADTLARQFLFDVWHYFLLEGLCQSSDARIA 121 GRN DQ+A+LRDAHQF N LLVE PNGSYADTLARQFLFD WHYFLL+GL +S+DARIA Sbjct: 64 AGRNADQMAYLRDAHQFRNPLLVEQPNGSYADTLARQFLFDTWHYFLLDGLQRSTDARIA 123 Query: 122 EIAQKCFKEVTYHVRRSTDLMIRLGDGTEDSHRRMQAAIDALWMYTGELFVADALDQAMQ 181 EIA K KEVTYHVRRS DL++RLGDG+E+SHRRMQ A + LWM++ ELF +DA D A+ Sbjct: 124 EIAAKSLKEVTYHVRRSADLVVRLGDGSEESHRRMQDAFNDLWMFSDELFESDAGDAALV 183 Query: 182 EQGVATALGEVQQKWTQHVTDVLLEATLKVPPAGLWMQSGGKAGRHTEHLGYLLAEMQFL 241 + G+ + + W +HV VL EATL++ PAG W QSGG+ GRHTEHLGYLLAEMQFL Sbjct: 184 QAGLVPDPASLAEPWQRHVAAVLEEATLQL-PAGTWSQSGGRHGRHTEHLGYLLAEMQFL 242 Query: 242 QRAYPGAQW 250 QRAYPGA W Sbjct: 243 QRAYPGASW 251 >Q5NZZ0.1 Q5NZZ0_AROAE Similar to aerobic phenylacetate degradation protein Length = 251 Score = 335 bits (860), Expect = 2e-90, Method: Compositional matrix adjust. Identities = 160/250 (64%), Positives = 195/250 (78%), Gaps = 1/250 (0%) Query: 1 MTQKTDYVRRLGDNVLVLSQRLTEWCGKGPALEEDMALINVSLDLIGQARLWLSYAAELE 60 + K+ Y+ RLGDN LVLSQRL+EWCGKGPA EEDMAL N++LDLIGQAR+WLSYA E+E Sbjct: 3 LDDKSVYLMRLGDNALVLSQRLSEWCGKGPAFEEDMALTNIALDLIGQARMWLSYAGEVE 62 Query: 61 GQGRNEDQLAFLRDAHQFHNLLLVELPNGSYADTLARQFLFDVWHYFLLEGLCQSSDARI 120 G+GR+ED LAF RD+H+F NLLLVE PNG YA TL RQF FD WH +L+ L +S+D RI Sbjct: 63 GRGRDEDALAFRRDSHEFTNLLLVEQPNGDYAQTLVRQFFFDAWHQLVLDALRRSADDRI 122 Query: 121 AEIAQKCFKEVTYHVRRSTDLMIRLGDGTEDSHRRMQAAIDALWMYTGELFVADALDQAM 180 A+IA K KEV YH+RRS DL++RLGDG+ +S RRMQAA++ LWMYTGE+F AD ++ + Sbjct: 123 ADIASKAIKEVAYHLRRSIDLVVRLGDGSAESRRRMQAAVEELWMYTGEMFNADETEELL 182 Query: 181 QEQGVATALGEVQQKWTQHVTDVLLEATLKVPPAGLWMQSGGKAGRHTEHLGYLLAEMQF 240 QG+A ++ W V++V EATL++ PAG WMQ GGK GRH EHLG LLAEMQF Sbjct: 183 GAQGLACDPSTLKDAWLAMVSEVFAEATLEL-PAGEWMQKGGKQGRHGEHLGLLLAEMQF 241 Query: 241 LQRAYPGAQW 250 LQRAYPGA W Sbjct: 242 LQRAYPGATW 251 >E5UC59.1 E5UC59_ALCXX Phenylacetic acid degradation protein Length = 254 Score = 332 bits (850), Expect = 4e-89, Method: Compositional matrix adjust. Identities = 160/248 (64%), Positives = 191/248 (77%), Gaps = 3/248 (1%) Query: 6 DYVRRLGDNVLVLSQRLTEWCGKGPALEEDMALINVSLDLIGQARLWLSYAAELEGQGRN 65 +Y+ RLGD L+LSQRL W G GP LEED+AL N +LDL+GQAR+WL+ A E+EG GR+ Sbjct: 7 EYLLRLGDTTLILSQRLGAWTGHGPILEEDLALTNTALDLLGQARMWLTLAGEVEGAGRD 66 Query: 66 EDQLAFLRDAHQFHNLLLVELPNGSYADTLARQFLFDVWHYFLLEGLCQSSDARIAEIAQ 125 ED LA+LRDAHQFHN LLVE PNG+YADT+ARQFLFDVWHYFLL+ L QSSD R+A IA Sbjct: 67 EDALAYLRDAHQFHNALLVERPNGNYADTMARQFLFDVWHYFLLQRLAQSSDERVAGIAA 126 Query: 126 KCFKEVTYHVRRSTDLMIRLGDGTEDSHRRMQAAIDALWMYTGELFVADALDQAMQEQGV 185 K KEVTYHVRRS+D+++RLGDGTE SH RMQAA+D W +TGELF DA+DQ M +G+ Sbjct: 127 KSLKEVTYHVRRSSDMVVRLGDGTETSHARMQAALDDAWRFTGELFTDDAIDQDMAARGI 186 Query: 186 ATALGEVQQKWTQHVTDVLLEATLKVP---PAGLWMQSGGKAGRHTEHLGYLLAEMQFLQ 242 L ++ W QHV +VL EATL VP A GG+ GRHTE LGY+LAEMQ+L Sbjct: 187 GCELAALRAPWEQHVREVLEEATLTVPDSAAANHPAHRGGRQGRHTEELGYVLAEMQYLP 246 Query: 243 RAYPGAQW 250 RAYPGA+W Sbjct: 247 RAYPGAKW 254 >Q2L2P0.1 Q2L2P0_BORA1 Phenylacetic acid degradation protein Length = 254 Score = 323 bits (827), Expect = 2e-86, Method: Compositional matrix adjust. Identities = 160/252 (63%), Positives = 191/252 (75%), Gaps = 11/252 (4%) Query: 6 DYVRRLGDNVLVLSQRLTEWCGKGPALEEDMALINVSLDLIGQARLWLSYAAELEGQGRN 65 +Y+ RLGD+ L+LSQRL EWCG GP LEED+AL N +LDL+GQAR+WL+ AAE+EG GR+ Sbjct: 7 EYLLRLGDSTLILSQRLGEWCGHGPVLEEDLALTNTALDLLGQARMWLTLAAEVEGAGRD 66 Query: 66 EDQLAFLRDAHQFHNLLLVELPNGSYADTLARQFLFDVWHYFLLEGLCQSSDARIAEIAQ 125 EDQLA+LRDAHQF N LLVE NG Y DT+ARQFLFDVWHYFLL GL S+D R+A IA Sbjct: 67 EDQLAYLRDAHQFRNCLLVERVNGHYGDTMARQFLFDVWHYFLLRGLTASTDERVAAIAA 126 Query: 126 KCFKEVTYHVRRSTDLMIRLGDGTEDSHRRMQAAIDALWMYTGELFVADALDQAMQEQGV 185 K KEVTYHVRR++DL++RLGDGTE+SHRRMQAA+DA W Y GELFV D +D + +G+ Sbjct: 127 KSLKEVTYHVRRASDLVVRLGDGTEESHRRMQAALDAAWPYAGELFVDDEVDLDLAGRGI 186 Query: 186 ATALGEVQQKWTQHVTDVLLEATLKVP-------PAGLWMQSGGKAGRHTEHLGYLLAEM 238 A ++ W HV +VL EATL VP PA GG GRHTE LGY+LAEM Sbjct: 187 CVARASLRAPWLAHVREVLEEATLIVPDEQEAFHPA----HRGGWQGRHTEALGYVLAEM 242 Query: 239 QFLQRAYPGAQW 250 Q LQR+YPGA+W Sbjct: 243 QHLQRSYPGARW 254 >A9IJQ1.1 A9IJQ1_BORPD Phenylacetic acid degradation protein Length = 254 Score = 320 bits (820), Expect = 1e-85, Method: Compositional matrix adjust. Identities = 156/248 (62%), Positives = 188/248 (75%), Gaps = 3/248 (1%) Query: 6 DYVRRLGDNVLVLSQRLTEWCGKGPALEEDMALINVSLDLIGQARLWLSYAAELEGQGRN 65 +Y+ RLGD LVLSQRL+EWCG GPALEED+AL N +LDL+GQAR+WL+ A E+EG GR+ Sbjct: 7 EYLLRLGDTTLVLSQRLSEWCGHGPALEEDLALTNTALDLLGQARMWLTLAGEVEGAGRD 66 Query: 66 EDQLAFLRDAHQFHNLLLVELPNGSYADTLARQFLFDVWHYFLLEGLCQSSDARIAEIAQ 125 ED LA+LR AH+F N LVE PNG Y DTLARQF FDVWHYFLL+ L QS+D R+A IA Sbjct: 67 EDALAYLRHAHEFRNATLVERPNGHYGDTLARQFFFDVWHYFLLQRLAQSADERVAAIAA 126 Query: 126 KCFKEVTYHVRRSTDLMIRLGDGTEDSHRRMQAAIDALWMYTGELFVADALDQAMQEQGV 185 K KEVTYHVRRS+DL++RLGDGT +SH RMQ A++A W YTGELF+ DA+D+ + +GV Sbjct: 127 KSLKEVTYHVRRSSDLVVRLGDGTPESHARMQEAVEAAWRYTGELFIDDAIDRDLAARGV 186 Query: 186 ATALGEVQQKWTQHVTDVLLEATLKVP---PAGLWMQSGGKAGRHTEHLGYLLAEMQFLQ 242 L +++ W HV +VL EATL +P AG GG+ GRHTE L YLLAEMQ L Sbjct: 187 GCELAALREPWLAHVREVLDEATLTMPELDEAGHAALQGGRQGRHTEALSYLLAEMQSLP 246 Query: 243 RAYPGAQW 250 RAYPGA W Sbjct: 247 RAYPGAVW 254 >Q7WGX8.1 Q7WGX8_BORBR Phenylacetic acid degradation protein Length = 254 Score = 320 bits (819), Expect = 2e-85, Method: Compositional matrix adjust. Identities = 158/252 (62%), Positives = 188/252 (74%), Gaps = 11/252 (4%) Query: 6 DYVRRLGDNVLVLSQRLTEWCGKGPALEEDMALINVSLDLIGQARLWLSYAAELEGQGRN 65 +Y+ RLGD LVLSQRL +WCG GP LEED+AL N +LDL+GQAR+WL+ A E+EG GR+ Sbjct: 7 EYLLRLGDTTLVLSQRLGQWCGHGPVLEEDLALTNTALDLLGQARMWLTLAGEVEGAGRD 66 Query: 66 EDQLAFLRDAHQFHNLLLVELPNGSYADTLARQFLFDVWHYFLLEGLCQSSDARIAEIAQ 125 ED+LA+LRDA QF NLLLVE PNG Y DT+ARQFLFD WHYFLL L +S+D R+A IA Sbjct: 67 EDRLAYLRDAPQFRNLLLVERPNGHYGDTMARQFLFDTWHYFLLIRLARSADERVAAIAA 126 Query: 126 KCFKEVTYHVRRSTDLMIRLGDGTEDSHRRMQAAIDALWMYTGELFVADALDQAMQEQGV 185 K KEVTYH RRS DL++RLGDGT SH RMQAAIDA W Y GE+FV DA+DQ + +G+ Sbjct: 127 KALKEVTYHARRSADLVVRLGDGTALSHARMQAAIDAAWPYVGEMFVDDAIDQDLAARGI 186 Query: 186 ATALGEVQQKWTQHVTDVLLEATLKVP-------PAGLWMQSGGKAGRHTEHLGYLLAEM 238 A L ++ +W V +VL EATL +P PA GG+ GRHTEHLGY+LAEM Sbjct: 187 ACELSSLRDEWLAQVREVLDEATLAMPQEDEAFHPA----HRGGRQGRHTEHLGYILAEM 242 Query: 239 QFLQRAYPGAQW 250 Q LQRAYPGA W Sbjct: 243 QHLQRAYPGASW 254 >Q7W9S9.1 Q7W9S9_BORPA Phenylacetic acid degradation protein Length = 254 Score = 320 bits (819), Expect = 2e-85, Method: Compositional matrix adjust. Identities = 158/252 (62%), Positives = 188/252 (74%), Gaps = 11/252 (4%) Query: 6 DYVRRLGDNVLVLSQRLTEWCGKGPALEEDMALINVSLDLIGQARLWLSYAAELEGQGRN 65 +Y+ RLGD LVLSQRL +WCG GP LEED+AL N +LDL+GQAR+WL+ A E+EG GR+ Sbjct: 7 EYLLRLGDTTLVLSQRLGQWCGHGPVLEEDLALTNTALDLLGQARMWLTLAGEVEGAGRD 66 Query: 66 EDQLAFLRDAHQFHNLLLVELPNGSYADTLARQFLFDVWHYFLLEGLCQSSDARIAEIAQ 125 ED+LA+LRDA QF NLLLVE PNG Y DT+ARQFLFD WHYFLL L +S+D R+A IA Sbjct: 67 EDRLAYLRDAPQFRNLLLVERPNGHYGDTMARQFLFDTWHYFLLIRLARSADERVAAIAA 126 Query: 126 KCFKEVTYHVRRSTDLMIRLGDGTEDSHRRMQAAIDALWMYTGELFVADALDQAMQEQGV 185 K KEVTYH RRS DL++RLGDGT SH RMQAAIDA W Y GE+FV DA+DQ + +G+ Sbjct: 127 KALKEVTYHARRSADLVVRLGDGTALSHARMQAAIDAAWPYVGEMFVDDAIDQDLAARGI 186 Query: 186 ATALGEVQQKWTQHVTDVLLEATLKVP-------PAGLWMQSGGKAGRHTEHLGYLLAEM 238 A L ++ +W V +VL EATL +P PA GG+ GRHTEHLGY+LAEM Sbjct: 187 ACELSSLRDEWLAQVREVLDEATLAMPQEDEAFHPA----HRGGRQGRHTEHLGYILAEM 242 Query: 239 QFLQRAYPGAQW 250 Q LQRAYPGA W Sbjct: 243 QHLQRAYPGASW 254