BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0031.0109.p (93 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B3E2V5.1 B3E2V5_GEOLS Type III restriction protein res subunit 122 2e-26 A8RUN8.1 A8RUN8_9CLOT Putative uncharacterized protein 112 2e-23 B0PEE4.1 B0PEE4_9FIRM Putative uncharacterized protein 109 1e-22 E4TLA9.1 E4TLA9_MARTH Type III restriction protein res subunit 103 9e-21 E1QXB3.1 E1QXB3_OLSUV Type III restriction protein res subunit 102 3e-20 A8YCA5.1 A8YCA5_MICAE HsdR protein 101 3e-20 A1VBQ8.1 A1VBQ8_DESVV Type III restriction enzyme, res subunit 101 4e-20 Q8TP05.1 Q8TP05_METAC Type I site-specific deoxyribonuclease 100 1e-19 Q1R1F7.1 Q1R1F7_CHRSD Type III restriction enzyme, res subunit 100 1e-19 A1ZWX9.1 A1ZWX9_9BACT Type I site-specific deoxyribonuclease 99 2e-19 >B3E2V5.1 B3E2V5_GEOLS Type III restriction protein res subunit Length = 924 Score = 122 bits (306), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 59/81 (72%), Positives = 67/81 (82%), Gaps = 2/81 (2%) Query: 1 MTPEIKARQHIDQKLEQAGWVIQDMRQLNLGAAAGVVVREYPTDTGPADYVLFVNRSPVG 60 MTPE KARQ IDQKLEQAGWV+QD++++NLGA GVVVREYPTDTGPADY+LFV+R PVG Sbjct: 1 MTPEAKARQEIDQKLEQAGWVVQDLKKINLGAGPGVVVREYPTDTGPADYLLFVDRQPVG 60 Query: 61 VIEAKKDTAGENLTATESQTD 81 VIEAK D LT E QT+ Sbjct: 61 VIEAKPDNT--ILTFVEDQTE 79 >A8RUN8.1 A8RUN8_9CLOT Putative uncharacterized protein Length = 394 Score = 112 bits (280), Expect = 2e-23, Method: Composition-based stats. Identities = 51/80 (63%), Positives = 62/80 (77%) Query: 1 MTPEIKARQHIDQKLEQAGWVIQDMRQLNLGAAAGVVVREYPTDTGPADYVLFVNRSPVG 60 MTPE KAR ID+KLEQ+GW +QD++QLN A+ G+ VRE+PT+TGP DY LFVN PVG Sbjct: 1 MTPEQKARLSIDKKLEQSGWTVQDLKQLNPMASLGIAVREFPTNTGPVDYALFVNGKPVG 60 Query: 61 VIEAKKDTAGENLTATESQT 80 VIEAK AGEN+T E Q+ Sbjct: 61 VIEAKPSNAGENITTVEEQS 80 >B0PEE4.1 B0PEE4_9FIRM Putative uncharacterized protein Length = 286 Score = 109 bits (273), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 51/80 (63%), Positives = 61/80 (76%) Query: 1 MTPEIKARQHIDQKLEQAGWVIQDMRQLNLGAAAGVVVREYPTDTGPADYVLFVNRSPVG 60 MTPE KAR+ IDQ+L QAGW++QDM QLN A GV V E+PT TGP DY LFV+ +PVG Sbjct: 1 MTPEQKAREAIDQRLAQAGWILQDMHQLNPMAGPGVAVLEFPTSTGPVDYALFVDGTPVG 60 Query: 61 VIEAKKDTAGENLTATESQT 80 V+EAK D GEN+T ESQ+ Sbjct: 61 VVEAKPDEKGENITVVESQS 80 >E4TLA9.1 E4TLA9_MARTH Type III restriction protein res subunit Length = 935 Score = 103 bits (257), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 48/79 (60%), Positives = 57/79 (72%) Query: 2 TPEIKARQHIDQKLEQAGWVIQDMRQLNLGAAAGVVVREYPTDTGPADYVLFVNRSPVGV 61 PE AR IDQ L AGW++QD ++NL A G+ VREY TD GPADYVLFVNR PVGV Sbjct: 8 NPEQIARDRIDQMLMDAGWLVQDKSKVNLSAGLGIAVREYQTDIGPADYVLFVNRKPVGV 67 Query: 62 IEAKKDTAGENLTATESQT 80 IEAK++ +GE LT E Q+ Sbjct: 68 IEAKREESGEKLTVVEDQS 86 >E1QXB3.1 E1QXB3_OLSUV Type III restriction protein res subunit Length = 913 Score = 102 bits (253), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 48/80 (60%), Positives = 57/80 (71%) Query: 1 MTPEIKARQHIDQKLEQAGWVIQDMRQLNLGAAAGVVVREYPTDTGPADYVLFVNRSPVG 60 M PE KAR ID KLEQAG+V+QDM +LN A GV VREYPT++GP DY+LF++R PVG Sbjct: 1 MHPEEKARMEIDAKLEQAGYVVQDMSELNPAAKFGVAVREYPTNSGPVDYLLFIDRVPVG 60 Query: 61 VIEAKKDTAGENLTATESQT 80 VIEAK G LT Q+ Sbjct: 61 VIEAKAHDKGHQLTTVAEQS 80 >A8YCA5.1 A8YCA5_MICAE HsdR protein Length = 915 Score = 101 bits (252), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 44/80 (55%), Positives = 61/80 (76%) Query: 2 TPEIKARQHIDQKLEQAGWVIQDMRQLNLGAAAGVVVREYPTDTGPADYVLFVNRSPVGV 61 TPE ++R+ ID++L QAGW IQD +++N + GV +REYPTD+G ADYVLFV+R PVG+ Sbjct: 7 TPENQSRELIDEQLRQAGWSIQDKKEINFNTSLGVAIREYPTDSGFADYVLFVDREPVGI 66 Query: 62 IEAKKDTAGENLTATESQTD 81 IEAK++ G LT E Q++ Sbjct: 67 IEAKREEKGFCLTVAEEQSN 86 >A1VBQ8.1 A1VBQ8_DESVV Type III restriction enzyme, res subunit Length = 921 Score = 101 bits (251), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 44/78 (56%), Positives = 57/78 (73%) Query: 3 PEIKARQHIDQKLEQAGWVIQDMRQLNLGAAAGVVVREYPTDTGPADYVLFVNRSPVGVI 62 PE KAR ID+ L++ GW +QD +++N A GV VREYPTD GPADYVLFV+R PVGVI Sbjct: 8 PEQKARDAIDKTLDECGWAVQDKKKINFNAGLGVAVREYPTDAGPADYVLFVDRKPVGVI 67 Query: 63 EAKKDTAGENLTATESQT 80 EAK++ G++L Q+ Sbjct: 68 EAKREEEGQHLVTVAEQS 85 >Q8TP05.1 Q8TP05_METAC Type I site-specific deoxyribonuclease Length = 917 Score = 100 bits (248), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 44/79 (55%), Positives = 57/79 (72%) Query: 2 TPEIKARQHIDQKLEQAGWVIQDMRQLNLGAAAGVVVREYPTDTGPADYVLFVNRSPVGV 61 TPE KAR ID+KL AGW++Q ++ A+ G+ V+EY TD GPADYVLFV++ PVG+ Sbjct: 6 TPEQKARNEIDKKLNNAGWIVQKKSKIEWSASRGIAVKEYLTDVGPADYVLFVDKKPVGI 65 Query: 62 IEAKKDTAGENLTATESQT 80 IEAK+D G LTA E Q+ Sbjct: 66 IEAKRDEEGHRLTAVEEQS 84 >Q1R1F7.1 Q1R1F7_CHRSD Type III restriction enzyme, res subunit Length = 925 Score = 99.8 bits (247), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 45/80 (56%), Positives = 59/80 (73%) Query: 1 MTPEIKARQHIDQKLEQAGWVIQDMRQLNLGAAAGVVVREYPTDTGPADYVLFVNRSPVG 60 +TPE +AR+ ID++LE+AGW++Q M +LN A GV VREYPTD+GP DY+L V+ VG Sbjct: 4 LTPEQQARRRIDRQLEEAGWIVQSMSELNPAAGRGVAVREYPTDSGPMDYLLMVDHQAVG 63 Query: 61 VIEAKKDTAGENLTATESQT 80 VIEAK+D G L A E Q+ Sbjct: 64 VIEAKRDDEGHRLNAVELQS 83 >A1ZWX9.1 A1ZWX9_9BACT Type I site-specific deoxyribonuclease Length = 935 Score = 99.4 bits (246), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 46/78 (58%), Positives = 56/78 (71%) Query: 3 PEIKARQHIDQKLEQAGWVIQDMRQLNLGAAAGVVVREYPTDTGPADYVLFVNRSPVGVI 62 PE AR IDQ L+QAGW +Q ++NL A+ GV VREY TD GPADYVLFV R PVG+I Sbjct: 8 PEQIARDKIDQLLQQAGWAVQAKNKVNLNASQGVAVREYQTDVGPADYVLFVKRKPVGII 67 Query: 63 EAKKDTAGENLTATESQT 80 EAK++ G +LT E Q+ Sbjct: 68 EAKREKEGHHLTMVEEQS 85