BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0031.0073.p (254 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value D8ISV1.1 D8ISV1_HERSS Cytochrome c1 transmembrane protein 528 e-148 A4G9H2.1 A4G9H2_HERAR Cytochrome c1 433 e-119 A6T362.1 A6T362_JANMA Cytochrome c1 EC=1.10.2.2 424 e-117 F1VX68.1 F1VX68_9BURK Ubiquinol cytochrome C oxidoreductase, cyt... 392 e-107 A2SE24.1 A2SE24_METPP Cytochrome c1 EC=1.10.2.2 358 5e-97 Q0K6A7.1 Q0K6A7_CUPNH Ubiquinol-cytochrome c reductase, cytochro... 349 2e-94 B3R780.1 B3R780_CUPTR CYTOCHROME bC1 complex (Ubiquinol:ferricyt... 347 9e-94 Q46WN2.1 Q46WN2_CUPPJ Cytochrome c1 342 3e-92 D8NXA8.1 D8NXA8_RALSO Cytochrome bC1 complex (Ubiquinol:ferricyt... 339 2e-91 A4SV34.1 A4SV34_POLSQ Cytochrome c1 339 3e-91 >D8ISV1.1 D8ISV1_HERSS Cytochrome c1 transmembrane protein Length = 254 Score = 528 bits (1360), Expect = e-148, Method: Compositional matrix adjust. Identities = 253/254 (99%), Positives = 254/254 (100%) Query: 1 MTLLKKVIAALALLPALACASEGTFPLDHAPDRTKDVSSLQNGAKLFVNYCLNCHSASSM 60 MTLLKKVIAALALLPALACASEGTFPLDHAPDRTKDVSSLQNGAKLFVNYCLNCHSASSM Sbjct: 1 MTLLKKVIAALALLPALACASEGTFPLDHAPDRTKDVSSLQNGAKLFVNYCLNCHSASSM 60 Query: 61 RYNRLRDIGLTEDQIKNNLMFSGEKVGDLMKISLSPQDAKAWFGAAPPDLSVIARAKASE 120 RYNRLRDIGLTEDQIKNNLMFSGEKVGDLMKISLSPQDAKAWFGAAPPDLSVIARAKASE Sbjct: 61 RYNRLRDIGLTEDQIKNNLMFSGEKVGDLMKISLSPQDAKAWFGAAPPDLSVIARAKASE 120 Query: 121 AGSGPDWIYTYLRSYYTDDSRPTGWNNMLFPNVGMPHVLWELQGIRRAKFVEEKDPHDAS 180 AGSGPDWIYTYLRSYYTDDSRPTGWNNMLFPNVGMPHVLWELQGIR+AKFVEEKDPHDAS Sbjct: 121 AGSGPDWIYTYLRSYYTDDSRPTGWNNMLFPNVGMPHVLWELQGIRKAKFVEEKDPHDAS 180 Query: 181 KTIHKFAGFEQVKPGKMTTAEYDNNVADLVAYLQWMAEPAQNTRKRLGVWVLLFLGIFAV 240 KTIHKFAGFEQVKPGKMTTAEYDNNVADLVAYLQWMAEPAQNTRKRLGVWVLLFLGIFAV Sbjct: 181 KTIHKFAGFEQVKPGKMTTAEYDNNVADLVAYLQWMAEPAQNTRKRLGVWVLLFLGIFAV 240 Query: 241 LAWRLNASYWKNIK 254 LAWRLNASYWKNIK Sbjct: 241 LAWRLNASYWKNIK 254 >A4G9H2.1 A4G9H2_HERAR Cytochrome c1 Length = 254 Score = 433 bits (1113), Expect = e-119, Method: Compositional matrix adjust. Identities = 196/254 (77%), Positives = 227/254 (89%) Query: 1 MTLLKKVIAALALLPALACASEGTFPLDHAPDRTKDVSSLQNGAKLFVNYCLNCHSASSM 60 M LLKK+IAAL LLP LA A+ G FPLD APD TKD+++LQNGA+LFVNYCL+CHSAS+M Sbjct: 1 MKLLKKLIAALVLLPGLALAAGGEFPLDRAPDHTKDLAALQNGARLFVNYCLSCHSASAM 60 Query: 61 RYNRLRDIGLTEDQIKNNLMFSGEKVGDLMKISLSPQDAKAWFGAAPPDLSVIARAKASE 120 RYN+L+DIGLTE+QIKNNL+F+ +KVG +M I+++P+DAK WFGA PPDLSVIARAKAS Sbjct: 61 RYNKLQDIGLTEEQIKNNLLFTSDKVGSMMTIAMAPKDAKEWFGATPPDLSVIARAKASS 120 Query: 121 AGSGPDWIYTYLRSYYTDDSRPTGWNNMLFPNVGMPHVLWELQGIRRAKFVEEKDPHDAS 180 AGSGPDW+YTYLR+YY DD+R TGWNN+ FPNVGMPHVLWELQG+R AKFVEEKDPHDAS Sbjct: 121 AGSGPDWLYTYLRTYYKDDTRATGWNNLTFPNVGMPHVLWELQGVREAKFVEEKDPHDAS 180 Query: 181 KTIHKFAGFEQVKPGKMTTAEYDNNVADLVAYLQWMAEPAQNTRKRLGVWVLLFLGIFAV 240 K +HKFAGFEQV PGKMT EYD +VADLV+++ WMAEPAQNTRKRLGVWVLLFLG+ V Sbjct: 181 KVVHKFAGFEQVTPGKMTALEYDKSVADLVSFMTWMAEPAQNTRKRLGVWVLLFLGVCIV 240 Query: 241 LAWRLNASYWKNIK 254 L WRLNASYWK+IK Sbjct: 241 LTWRLNASYWKDIK 254 >A6T362.1 A6T362_JANMA Cytochrome c1 EC=1.10.2.2 Length = 254 Score = 424 bits (1091), Expect = e-117, Method: Compositional matrix adjust. Identities = 191/254 (75%), Positives = 226/254 (88%) Query: 1 MTLLKKVIAALALLPALACASEGTFPLDHAPDRTKDVSSLQNGAKLFVNYCLNCHSASSM 60 MTLLKK+IA+L LLP L ASE FPLDHAPDRTKD+++LQNGA+LFVNYCL+CH+ASS+ Sbjct: 1 MTLLKKLIASLVLLPGLVLASESDFPLDHAPDRTKDLAALQNGARLFVNYCLSCHAASSL 60 Query: 61 RYNRLRDIGLTEDQIKNNLMFSGEKVGDLMKISLSPQDAKAWFGAAPPDLSVIARAKASE 120 RYN+L+D+GLTE+QIKNNL+F+ +KVG +M I+++P+DAK WFGA PPDLSVIARAKAS Sbjct: 61 RYNKLQDLGLTEEQIKNNLLFTSDKVGGMMTIAMAPKDAKNWFGAVPPDLSVIARAKASG 120 Query: 121 AGSGPDWIYTYLRSYYTDDSRPTGWNNMLFPNVGMPHVLWELQGIRRAKFVEEKDPHDAS 180 AG+G DW+YTYLRSYY DD+R TGWNNM+FPNVGMPHVLWELQGIR AKFV EKDPHD + Sbjct: 121 AGTGADWLYTYLRSYYKDDTRATGWNNMVFPNVGMPHVLWELQGIRDAKFVNEKDPHDPN 180 Query: 181 KTIHKFAGFEQVKPGKMTTAEYDNNVADLVAYLQWMAEPAQNTRKRLGVWVLLFLGIFAV 240 K +HKFAGFEQV PG +T EYD VADLV+++ WMAEPAQNTRKRLGVWVL+FLG+F V Sbjct: 181 KVVHKFAGFEQVTPGLLTPLEYDKAVADLVSFMTWMAEPAQNTRKRLGVWVLMFLGVFIV 240 Query: 241 LAWRLNASYWKNIK 254 + WRLNASYWK+IK Sbjct: 241 ITWRLNASYWKDIK 254 >F1VX68.1 F1VX68_9BURK Ubiquinol cytochrome C oxidoreductase, cytochrome C1 subunit Length = 254 Score = 392 bits (1006), Expect = e-107, Method: Compositional matrix adjust. Identities = 175/254 (68%), Positives = 213/254 (83%) Query: 1 MTLLKKVIAALALLPALACASEGTFPLDHAPDRTKDVSSLQNGAKLFVNYCLNCHSASSM 60 M L KK+I LA +PALA A+EG LD APD D+SSLQ+GAKLFVNYCLNCH+A+SM Sbjct: 1 MKLFKKLILVLAFVPALALANEGGPKLDRAPDHATDLSSLQHGAKLFVNYCLNCHAAASM 60 Query: 61 RYNRLRDIGLTEDQIKNNLMFSGEKVGDLMKISLSPQDAKAWFGAAPPDLSVIARAKASE 120 RYNR+RDIGL+EDQIK NL+F+ +KVGDLMK+S++P+D+K WFG PPDLSV+ARAK+S Sbjct: 61 RYNRMRDIGLSEDQIKANLLFATDKVGDLMKVSMAPKDSKEWFGVVPPDLSVMARAKSSG 120 Query: 121 AGSGPDWIYTYLRSYYTDDSRPTGWNNMLFPNVGMPHVLWELQGIRRAKFVEEKDPHDAS 180 AGSG D++YTYLR++Y D+SRPTGWNN+++PN MPHVLWELQGIR AK+VE KDPHD S Sbjct: 121 AGSGEDYLYTYLRTFYKDESRPTGWNNLVYPNAAMPHVLWELQGIREAKYVEVKDPHDES 180 Query: 181 KTIHKFAGFEQVKPGKMTTAEYDNNVADLVAYLQWMAEPAQNTRKRLGVWVLLFLGIFAV 240 KT HKFAGF QVKPGKM+ EYD + DLV ++ WM EPAQN R+RLGV VLLF+ +F V Sbjct: 181 KTEHKFAGFTQVKPGKMSAIEYDQAIGDLVGFMSWMGEPAQNQRRRLGVIVLLFMSLFVV 240 Query: 241 LAWRLNASYWKNIK 254 +AWRLNAS+WK +K Sbjct: 241 IAWRLNASFWKEVK 254 >A2SE24.1 A2SE24_METPP Cytochrome c1 EC=1.10.2.2 Length = 255 Score = 358 bits (918), Expect = 5e-97, Method: Compositional matrix adjust. Identities = 161/238 (67%), Positives = 198/238 (83%), Gaps = 1/238 (0%) Query: 18 ACASEGTFPLDHAP-DRTKDVSSLQNGAKLFVNYCLNCHSASSMRYNRLRDIGLTEDQIK 76 A ASEG D P ++ DV+SLQ+GAKLFVNYCLNCHSA+ MRYNRL++IGL+E QIK Sbjct: 18 ARASEGGIAWDKFPQNKMTDVASLQHGAKLFVNYCLNCHSAAYMRYNRLQEIGLSEAQIK 77 Query: 77 NNLMFSGEKVGDLMKISLSPQDAKAWFGAAPPDLSVIARAKASEAGSGPDWIYTYLRSYY 136 NL+F+ +KVG+ MK++L P+ AK WFG PPDL+VIAR++A GSG D++YTYLRSYY Sbjct: 78 GNLLFATDKVGETMKVALDPKHAKEWFGGVPPDLTVIARSRAGAGGSGADYLYTYLRSYY 137 Query: 137 TDDSRPTGWNNMLFPNVGMPHVLWELQGIRRAKFVEEKDPHDASKTIHKFAGFEQVKPGK 196 DD++ TGWNNM+FP+VGMPHVLWELQG R AKFVEE DPHDASK +H+FAG+EQ+ PG Sbjct: 138 RDDTKATGWNNMVFPSVGMPHVLWELQGQRTAKFVEEADPHDASKKLHRFAGYEQLTPGT 197 Query: 197 MTTAEYDNNVADLVAYLQWMAEPAQNTRKRLGVWVLLFLGIFAVLAWRLNASYWKNIK 254 ++ YD+ V DLVAYLQWM EPAQN RKRLGVWVLLFLG+F ++AWRLNA+YWK++K Sbjct: 198 LSPLAYDDAVGDLVAYLQWMGEPAQNQRKRLGVWVLLFLGVFTIIAWRLNAAYWKDVK 255 >Q0K6A7.1 Q0K6A7_CUPNH Ubiquinol-cytochrome c reductase, cytochrome c1 EC=1.10.2.2 Length = 247 Score = 349 bits (895), Expect = 2e-94, Method: Compositional matrix adjust. Identities = 166/256 (64%), Positives = 203/256 (79%), Gaps = 14/256 (5%) Query: 4 LKKVIAALALLPAL-----ACASEGTFPLDHAPDRTKDVSSLQNGAKLFVNYCLNCHSAS 58 +KK+++ LAL A A ASEG FPL+ AP T D+SSLQ GAKLFVNYCLNCH AS Sbjct: 1 MKKLLSILALAGACFAGAPAMASEGGFPLEPAPVNTADLSSLQRGAKLFVNYCLNCHGAS 60 Query: 59 SMRYNRLRDIGLTEDQIKNNLMFSGEKVGDLMKISLSPQDAKAWFGAAPPDLSVIARAKA 118 MRYNRL+DIGLT+DQI+ NL+FS +KVG+ M I++ P++AKA+FGA PPDLSVIARA+ Sbjct: 61 MMRYNRLKDIGLTDDQIRENLLFSADKVGETMTIAMQPKEAKAFFGAQPPDLSVIARAR- 119 Query: 119 SEAGSGPDWIYTYLRSYYTDDSRPTGWNNMLFPNVGMPHVLWELQGIRRAKFVEEKDPHD 178 G DW+YTYLR++Y DDSR TGWNN++FP+VGMPHVLWELQG R AKF E + + Sbjct: 120 -----GDDWLYTYLRTFYRDDSRATGWNNLVFPSVGMPHVLWELQGQRAAKFTEVE---E 171 Query: 179 ASKTIHKFAGFEQVKPGKMTTAEYDNNVADLVAYLQWMAEPAQNTRKRLGVWVLLFLGIF 238 + +HKFAGFEQ+ PGK++ EYD ADLV++L WMAEPAQN RKRLGVWVLLFLG+F Sbjct: 172 HGEKVHKFAGFEQLSPGKLSKVEYDQAAADLVSFLDWMAEPAQNHRKRLGVWVLLFLGVF 231 Query: 239 AVLAWRLNASYWKNIK 254 V AWRLNA+YWK++K Sbjct: 232 TVFAWRLNAAYWKDVK 247 >B3R780.1 B3R780_CUPTR CYTOCHROME bC1 complex (Ubiquinol:ferricytochrome c oxidoreductase), transmembrane subunit EC=1.10.2.2 Length = 247 Score = 347 bits (890), Expect = 9e-94, Method: Compositional matrix adjust. Identities = 164/256 (64%), Positives = 203/256 (79%), Gaps = 14/256 (5%) Query: 4 LKKVIAALALLPAL-----ACASEGTFPLDHAPDRTKDVSSLQNGAKLFVNYCLNCHSAS 58 +KK+++ LAL A A ASEG FPL+ AP T D+SSLQ GAK+FVNYCLNCH AS Sbjct: 1 MKKLLSILALAGACIAGAPAMASEGGFPLEPAPVNTADLSSLQRGAKVFVNYCLNCHGAS 60 Query: 59 SMRYNRLRDIGLTEDQIKNNLMFSGEKVGDLMKISLSPQDAKAWFGAAPPDLSVIARAKA 118 MRYNRL+DIGLT+DQI+ NL+F+ +KVG+ M I++ P++AKA+FGA PPDLSVIARA+ Sbjct: 61 MMRYNRLKDIGLTDDQIRENLLFTADKVGETMNIAMQPKEAKAFFGAQPPDLSVIARAR- 119 Query: 119 SEAGSGPDWIYTYLRSYYTDDSRPTGWNNMLFPNVGMPHVLWELQGIRRAKFVEEKDPHD 178 G DW+YTYLR++Y DDSR TGWNN++FP+VGMPHVLWELQG R AKF E + + Sbjct: 120 -----GDDWLYTYLRTFYRDDSRATGWNNLVFPSVGMPHVLWELQGQRAAKFTEVE---E 171 Query: 179 ASKTIHKFAGFEQVKPGKMTTAEYDNNVADLVAYLQWMAEPAQNTRKRLGVWVLLFLGIF 238 + +HKFAGFEQ+ PGK++ EYD ADLV++L WMAEPAQN RKRLGVWVLLFLG+F Sbjct: 172 HGEKVHKFAGFEQLSPGKLSKVEYDQMTADLVSFLDWMAEPAQNHRKRLGVWVLLFLGVF 231 Query: 239 AVLAWRLNASYWKNIK 254 V AWRLNA+YWK++K Sbjct: 232 TVFAWRLNAAYWKDVK 247 >Q46WN2.1 Q46WN2_CUPPJ Cytochrome c1 Length = 247 Score = 342 bits (877), Expect = 3e-92, Method: Compositional matrix adjust. Identities = 160/235 (68%), Positives = 192/235 (81%), Gaps = 9/235 (3%) Query: 20 ASEGTFPLDHAPDRTKDVSSLQNGAKLFVNYCLNCHSASSMRYNRLRDIGLTEDQIKNNL 79 ASEG +PL+ AP T D+SSLQ GAKLFVNYCLNCHSAS MRYNRL+DIGLT+DQI+ NL Sbjct: 22 ASEGGYPLEPAPVNTADLSSLQRGAKLFVNYCLNCHSASMMRYNRLKDIGLTDDQIRENL 81 Query: 80 MFSGEKVGDLMKISLSPQDAKAWFGAAPPDLSVIARAKASEAGSGPDWIYTYLRSYYTDD 139 +FS +KVG+ M I++ P++AKA+FGA PPDLSVIARA+ G DW+YTYLR++Y DD Sbjct: 82 LFSADKVGETMTIAMQPKEAKAFFGAQPPDLSVIARAR------GDDWLYTYLRTFYRDD 135 Query: 140 SRPTGWNNMLFPNVGMPHVLWELQGIRRAKFVEEKDPHDASKTIHKFAGFEQVKPGKMTT 199 SR TGWNN++FP+VGMPHVLWELQG R AKF E + H + +HKFAGFEQ+ PGKM+ Sbjct: 136 SRATGWNNLVFPSVGMPHVLWELQGQRAAKFA-EAEVH--GEKVHKFAGFEQLSPGKMSK 192 Query: 200 AEYDNNVADLVAYLQWMAEPAQNTRKRLGVWVLLFLGIFAVLAWRLNASYWKNIK 254 EYD ADLV +L WMAEPAQN RKRLGVWVLLFLG+F V AWRLNA++WK++K Sbjct: 193 VEYDQATADLVGFLDWMAEPAQNHRKRLGVWVLLFLGMFTVFAWRLNAAFWKDVK 247 >D8NXA8.1 D8NXA8_RALSO Cytochrome bC1 complex (Ubiquinol:ferricytochrome c oxidoreductase), transmembrane subunit EC=1.10.2.2 Length = 248 Score = 339 bits (870), Expect = 2e-91, Method: Compositional matrix adjust. Identities = 163/255 (63%), Positives = 197/255 (77%), Gaps = 11/255 (4%) Query: 4 LKKVIAALAL----LPALACASEGTFPLDHAPDRTKDVSSLQNGAKLFVNYCLNCHSASS 59 +KK++A AL + A A+EG LD AP++++DVS+LQ GAKLFVNYCLNCH AS+ Sbjct: 1 MKKLLAICALAGFMIAAPVFANEGGVRLDPAPNQSEDVSALQRGAKLFVNYCLNCHGASA 60 Query: 60 MRYNRLRDIGLTEDQIKNNLMFSGEKVGDLMKISLSPQDAKAWFGAAPPDLSVIARAKAS 119 MRYNRLRDIGL+E+QIK NL+F+ +KVGD M+I++ +DAK WFGA PPDLSVIARA+ Sbjct: 61 MRYNRLRDIGLSEEQIKQNLLFTSDKVGDTMRIAMDREDAKKWFGAVPPDLSVIARAR-- 118 Query: 120 EAGSGPDWIYTYLRSYYTDDSRPTGWNNMLFPNVGMPHVLWELQGIRRAKFVEEKDPHDA 179 G DW+YTYLR++Y DD+RPTGWNN++F VGMPHVLWELQG R K+ K H Sbjct: 119 ----GSDWLYTYLRTFYRDDTRPTGWNNLVFDKVGMPHVLWELQGQRVPKYEAVKSEH-G 173 Query: 180 SKTIHKFAGFEQVKPGKMTTAEYDNNVADLVAYLQWMAEPAQNTRKRLGVWVLLFLGIFA 239 + HK GFEQV PGK+ T EYD VADLV YL WMAEPA N RKRLGVWVLLF+G+F Sbjct: 174 GEAEHKLVGFEQVAPGKLNTVEYDQAVADLVTYLDWMAEPAGNLRKRLGVWVLLFIGVFF 233 Query: 240 VLAWRLNASYWKNIK 254 VLAWRLNA+YWK+IK Sbjct: 234 VLAWRLNAAYWKDIK 248 >A4SV34.1 A4SV34_POLSQ Cytochrome c1 Length = 257 Score = 339 bits (869), Expect = 3e-91, Method: Compositional matrix adjust. Identities = 160/247 (64%), Positives = 195/247 (78%), Gaps = 7/247 (2%) Query: 7 VIAALALLPALACASEGTFPLDHAPDRTKDVSSLQNGAKLFVNYCLNCHSASSMRYNRLR 66 ++AAL L A A A+EG FPLD AP+R + +SLQNGAKLFVNYCLNCH+A+SMRYNRLR Sbjct: 17 LVAALGL-GANANANEGGFPLDAAPNRVSNNASLQNGAKLFVNYCLNCHAATSMRYNRLR 75 Query: 67 DIGLTEDQIKNNLMFSGEKVGDLMKISLSPQDAKAWFGAAPPDLSVIARAKASEAGSGPD 126 DIGLT+ QIK+NL+ + KVGDLM IS++P++ KA+FG PPDLSV ARA+ G D Sbjct: 76 DIGLTDQQIKDNLILNDAKVGDLMTISMTPKEGKAFFGKNPPDLSVEARAR------GTD 129 Query: 127 WIYTYLRSYYTDDSRPTGWNNMLFPNVGMPHVLWELQGIRRAKFVEEKDPHDASKTIHKF 186 W+YTYLR++Y DD+ TGWNN+++P VGMPHVLW+LQG R AKF E KDPHD S+T F Sbjct: 130 WLYTYLRTFYKDDTTQTGWNNLVYPKVGMPHVLWQLQGERAAKFEEHKDPHDESRTEEVF 189 Query: 187 AGFEQVKPGKMTTAEYDNNVADLVAYLQWMAEPAQNTRKRLGVWVLLFLGIFAVLAWRLN 246 GFEQ+ PG M EYD+N+ADLVA++ WMAEP Q RKRLGV VLLFL IF +LAWRLN Sbjct: 190 VGFEQLTPGTMKPQEYDDNIADLVAFMSWMAEPVQLERKRLGVVVLLFLAIFTLLAWRLN 249 Query: 247 ASYWKNI 253 +YWK+I Sbjct: 250 KAYWKDI 256