BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0031.0062.p (507 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value D8ISS4.1 D8ISS4_HERSS Methyl-accepting chemotaxis protein I 994 0.0 Q3SIF5.1 Q3SIF5_THIDA Chemotaxis sensory transducer 395 e-108 A6SUA4.1 A6SUA4_JANMA Methyl-accepting chemotaxis transducer tra... 395 e-107 C5AKH3.1 C5AKH3_BURGB Methyl-accepting chemotaxis protein 394 e-107 A4G9L0.1 A4G9L0_HERAR Methyl-accepting chemotaxis protein 387 e-105 A6T427.1 A6T427_JANMA Methyl-accepting chemotaxis protein 386 e-105 D8IY00.1 D8IY00_HERSS Methyl-accepting chemotaxis transducer tra... 383 e-104 Q93ET6.1 Q93ET6_RAHAQ Putative methyl-accepting chemotaxis prote... 378 e-102 A6T1W8.1 A6T1W8_JANMA Methyl-accepting chemotaxis protein 378 e-102 C5CXU6.1 C5CXU6_VARPS Methyl-accepting chemotaxis sensory transd... 377 e-102 >D8ISS4.1 D8ISS4_HERSS Methyl-accepting chemotaxis protein I Length = 507 Score = 994 bits (2569), Expect = 0.0, Method: Compositional matrix adjust. Identities = 505/507 (99%), Positives = 507/507 (100%) Query: 1 MKIGTRLGGSFMLVTLLTCALIVASTLTLTQIGRHWNDFSGTVLGKQDYATQGYIKLGDG 60 MKIGTRLGGSFMLVTLLTCALIVASTLTLTQIGRHWNDFSGTVLGKQDYATQGYIKLGDG Sbjct: 1 MKIGTRLGGSFMLVTLLTCALIVASTLTLTQIGRHWNDFSGTVLGKQDYATQGYIKLGDG 60 Query: 61 VQNFKNYVVRGKDYDRHFLADMDAIVRLMDQYRKLGVDNPKEEALLEKISNGERRYREAL 120 VQNFKNYVVRGKDYDRHFLADMDAIVRLM+QYRKLGVDNPKEEALLEKISNGERRYREAL Sbjct: 61 VQNFKNYVVRGKDYDRHFLADMDAIVRLMEQYRKLGVDNPKEEALLEKISNGERRYREAL 120 Query: 121 AKAQAMKAAGASPSEVDAAISGADKVLGAGFSGLLAIARENAGSTGEQISSAIGAGKSLS 180 AKAQAMKAAGASPSEVDAAISGADKVLGAGFSGLLAIARENAGSTGEQISSAIGAGKSLS Sbjct: 121 AKAQAMKAAGASPSEVDAAISGADKVLGAGFSGLLAIARENAGSTGEQISSAIGAGKSLS 180 Query: 181 LAVGALVVVLALVLAVLATRSITQPMREAVRIAKTVAAGDLGSRIVVTRKDETGELLQAL 240 LAVGALVV+LALVLAVLATRSITQPMREAVRIAKTVAAGDLGSRIVVTRKDETGELLQAL Sbjct: 181 LAVGALVVILALVLAVLATRSITQPMREAVRIAKTVAAGDLGSRIVVTRKDETGELLQAL 240 Query: 241 KEMNASLQKVVGGVREGSDTIVTASTQIAGGNLDLSARTEEQASSLEQTAAAMEEITSTV 300 KEMNASLQKVVGGVREGSDTIVTASTQIAGGNLDLSARTEEQASSLEQTAAAMEEITSTV Sbjct: 241 KEMNASLQKVVGGVREGSDTIVTASTQIAGGNLDLSARTEEQASSLEQTAAAMEEITSTV 300 Query: 301 RRNADHARQANAMAGSVSEVASRSGLVVSDVVGTMDEIQASAREIEEIISVIDGIAFQTN 360 RRNADHARQANAMAGSVSEVASRSGLVVSDVVGTMDEIQASAREIEEIISVIDGIAFQTN Sbjct: 301 RRNADHARQANAMAGSVSEVASRSGLVVSDVVGTMDEIQASAREIEEIISVIDGIAFQTN 360 Query: 361 ILALNAAVEAARAGEQGRGFAVVAAEVRSLAQRSATAAKEIKDLIGNSVEKIAAGSKLVQ 420 ILALNAAVEAARAGEQGRGFAVVAAEVRSLAQRSATAAKEIKDLIGNSVEKIAAGSKLVQ Sbjct: 361 ILALNAAVEAARAGEQGRGFAVVAAEVRSLAQRSATAAKEIKDLIGNSVEKIAAGSKLVQ 420 Query: 421 AAGATIEELVRSVRDVTQIMSEISAASGEQESGIEQVNQAIAQMDTVTQQNAALVEEAAA 480 AAGATIEELVRSVRDVTQIMSEISAASGEQESGIEQVNQAIAQMDTVTQQNAALVEEAAA Sbjct: 421 AAGATIEELVRSVRDVTQIMSEISAASGEQESGIEQVNQAIAQMDTVTQQNAALVEEAAA 480 Query: 481 ATEALKAQARRLAESVSVFRLGGGQMA 507 ATEALKAQARRLAESVSVFRLGGGQMA Sbjct: 481 ATEALKAQARRLAESVSVFRLGGGQMA 507 >Q3SIF5.1 Q3SIF5_THIDA Chemotaxis sensory transducer Length = 559 Score = 395 bits (1016), Expect = e-108, Method: Compositional matrix adjust. Identities = 226/329 (68%), Positives = 271/329 (82%) Query: 175 AGKSLSLAVGALVVVLALVLAVLATRSITQPMREAVRIAKTVAAGDLGSRIVVTRKDETG 234 +G+ L + + + +++ + A TRSIT+PM +AV++A+TVAAGDL SRI V KDETG Sbjct: 182 SGRMLLIGLSIVALMMGIGFAFWITRSITRPMNQAVKVAQTVAAGDLTSRIEVEGKDETG 241 Query: 235 ELLQALKEMNASLQKVVGGVREGSDTIVTASTQIAGGNLDLSARTEEQASSLEQTAAAME 294 LLQALK+MN SL K+VG VR G+D I TAS++IA GNLDLS+RTEEQASSLE+TA++ME Sbjct: 242 RLLQALKDMNDSLVKIVGQVRLGTDAIATASSEIATGNLDLSSRTEEQASSLEETASSME 301 Query: 295 EITSTVRRNADHARQANAMAGSVSEVASRSGLVVSDVVGTMDEIQASAREIEEIISVIDG 354 ++TSTV++NADHARQAN MA S SEVA + G VV+ VV TM I S+R+I +II+VIDG Sbjct: 302 QLTSTVKQNADHARQANQMAVSASEVAVKGGAVVAQVVDTMGSINESSRKIVDIIAVIDG 361 Query: 355 IAFQTNILALNAAVEAARAGEQGRGFAVVAAEVRSLAQRSATAAKEIKDLIGNSVEKIAA 414 IAFQTNILALNAAVEAARAGEQGRGFAVVA+EVRSLAQRSA AAKEIK LIG+SVEK Sbjct: 362 IAFQTNILALNAAVEAARAGEQGRGFAVVASEVRSLAQRSAGAAKEIKTLIGDSVEKADI 421 Query: 415 GSKLVQAAGATIEELVRSVRDVTQIMSEISAASGEQESGIEQVNQAIAQMDTVTQQNAAL 474 GSKLV AGAT++E+V SV+ VT IM EI+AAS EQ +GIEQVNQAIAQMD VTQQNAAL Sbjct: 422 GSKLVGQAGATMDEIVASVKRVTDIMGEITAASQEQSAGIEQVNQAIAQMDEVTQQNAAL 481 Query: 475 VEEAAAATEALKAQARRLAESVSVFRLGG 503 VEEAAAA +++ QA LAE+VSVFRL G Sbjct: 482 VEEAAAAASSMQDQAANLAEAVSVFRLAG 510 >A6SUA4.1 A6SUA4_JANMA Methyl-accepting chemotaxis transducer transmembrane protein Length = 568 Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust. Identities = 261/518 (50%), Positives = 339/518 (65%), Gaps = 15/518 (2%) Query: 1 MKIGTRLGGSFMLVTLLTCALIVASTLTLTQIGRHWNDFSGTVLGKQDYATQGYIKLGD- 59 +KI TRL F L+ L + V L L ++G + + T+L K+ A Q ++ D Sbjct: 6 LKISTRLSFGFALLLTLMVMMTVVGILRLQEVGTSADVMTQTMLPKERLA-QEWLSAVDV 64 Query: 60 -GVQNFKNYVVRGKDYDRHFLADMDAI-VRLMDQYRKLG--VDNPKEEALLEKISNGERR 115 G + + + F MD VR + +++ + P+++ L E++ Sbjct: 65 NGARTLASAKTTSAEDQAFFQKQMDKTSVRANELQKEIESMIKTPEDKRLFEELVVARNA 124 Query: 116 YREALAKAQAMKAAGASPSEVDAAISGADKVLGA------GFSGLLAIARENAGSTGEQI 169 YR+ +KA G P +A + +K+L A +L ++ G I Sbjct: 125 YRDIRQTVFKLKAEGKLP---EAQLLINEKMLPAMNAYSNSIDAVLQNEKKLIDEAGTSI 181 Query: 170 SSAIGAGKSLSLAVGALVVVLALVLAVLATRSITQPMREAVRIAKTVAAGDLGSRIVVTR 229 SA +G+SL + + A V L + A SIT+P+ AV +A+TVA+GDL ++I V+ Sbjct: 182 QSAFLSGRSLLIGLLAAAVALGVFFAWRLAISITRPLNRAVTVARTVASGDLSAKIEVSS 241 Query: 230 KDETGELLQALKEMNASLQKVVGGVREGSDTIVTASTQIAGGNLDLSARTEEQASSLEQT 289 DETG+L+QALK+M SL K V VR G++TI TAS QIA GNLDLS+RTEEQASSL +T Sbjct: 242 NDETGQLMQALKDMTQSLNKTVSEVRSGTETIATASRQIASGNLDLSSRTEEQASSLGET 301 Query: 290 AAAMEEITSTVRRNADHARQANAMAGSVSEVASRSGLVVSDVVGTMDEIQASAREIEEII 349 AA+M ++TSTVR+NAD+ARQAN++A S S+VA + G VVS+VV TM I SAR+I +II Sbjct: 302 AASMGQLTSTVRQNADNARQANSLAMSASDVAVKGGSVVSEVVDTMASINESARKIVDII 361 Query: 350 SVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAAEVRSLAQRSATAAKEIKDLIGNSV 409 SVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVA+EVR+LAQRSA AAKEIK LIG+SV Sbjct: 362 SVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRNLAQRSAAAAKEIKILIGDSV 421 Query: 410 EKIAAGSKLVQAAGATIEELVRSVRDVTQIMSEISAASGEQESGIEQVNQAIAQMDTVTQ 469 K+ AGSKLV AG+T+ E+V SV+ VT IM+EI AAS EQ SGI+QVNQAI QMD VTQ Sbjct: 422 GKVEAGSKLVNEAGSTMNEIVDSVKRVTDIMAEIMAASQEQSSGIDQVNQAIGQMDQVTQ 481 Query: 470 QNAALVEEAAAATEALKAQARRLAESVSVFRLGGGQMA 507 QNAALVEEAAAA E+L+ QA LA VS F+L G Q A Sbjct: 482 QNAALVEEAAAAAESLQDQAGNLARVVSQFKLDGNQPA 519 >C5AKH3.1 C5AKH3_BURGB Methyl-accepting chemotaxis protein Length = 526 Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust. Identities = 243/504 (48%), Positives = 327/504 (64%) Query: 1 MKIGTRLGGSFMLVTLLTCALIVASTLTLTQIGRHWNDFSGTVLGKQDYATQGYIKLGDG 60 + IG RL +F + L+T L + L+ I W + L K GD Sbjct: 8 LSIGVRLAIAFFIAALMTALLGAVAYTRLSSISEQWRTYESVTLAKLQLLQHAKDVFGDA 67 Query: 61 VQNFKNYVVRGKDYDRHFLADMDAIVRLMDQYRKLGVDNPKEEALLEKISNGERRYREAL 120 V N+K+YV+RG DY FLA++DAI + +LG E + ++ YR +L Sbjct: 68 VHNYKDYVLRGGDYRTKFLANLDAIDQAAQTSLELGTFGSGESDAVRTLTAATAGYRASL 127 Query: 121 AKAQAMKAAGASPSEVDAAISGADKVLGAGFSGLLAIARENAGSTGEQISSAIGAGKSLS 180 K A+ +GAS D +SGADK +G L+AI RE G+ ++ +S Sbjct: 128 DKLDALVNSGASIEARDHVVSGADKPIGKALDVLIAIGRERTHEQGKNVTHLASVAESTI 187 Query: 181 LAVGALVVVLALVLAVLATRSITQPMREAVRIAKTVAAGDLGSRIVVTRKDETGELLQAL 240 +AV + A++LA TR IT P+ AV A+ VA GDL I R DETG LL+AL Sbjct: 188 IAVTITALAAAVLLAFFITRDITLPIGVAVSAAEAVARGDLTQDITTDRADETGRLLRAL 247 Query: 241 KEMNASLQKVVGGVREGSDTIVTASTQIAGGNLDLSARTEEQASSLEQTAAAMEEITSTV 300 ++MN +L +VVG VR G+DT+ TA+++IA GN DLS+RTEEQASSL++TA++MEE+T+TV Sbjct: 248 RDMNENLLQVVGRVRSGADTMATATSEIAAGNHDLSSRTEEQASSLQETASSMEELTATV 307 Query: 301 RRNADHARQANAMAGSVSEVASRSGLVVSDVVGTMDEIQASAREIEEIISVIDGIAFQTN 360 R+NAD+A + + +A S ++VA + VV VV TM+EI S++ I +I V++GIAFQTN Sbjct: 308 RQNADNAHRGSTLATSAADVAHQGSAVVGKVVRTMEEISESSKRISDITGVVEGIAFQTN 367 Query: 361 ILALNAAVEAARAGEQGRGFAVVAAEVRSLAQRSATAAKEIKDLIGNSVEKIAAGSKLVQ 420 ILALNAAVEAARAG+QGRGFAVVA EVR+LAQRS +AAKEIK+LI SV K+ G+ L Sbjct: 368 ILALNAAVEAARAGDQGRGFAVVAGEVRNLAQRSGSAAKEIKELIAASVRKVQDGTNLAS 427 Query: 421 AAGATIEELVRSVRDVTQIMSEISAASGEQESGIEQVNQAIAQMDTVTQQNAALVEEAAA 480 AGAT+ E+ R+V V+ IM EI+AAS EQ GIEQVN A++QMD VTQQNAALVE+AAA Sbjct: 428 EAGATMSEVTRAVARVSDIMGEIAAASTEQSRGIEQVNLAVSQMDQVTQQNAALVEQAAA 487 Query: 481 ATEALKAQARRLAESVSVFRLGGG 504 A+ +L+ Q R+L+E V+ FRL G Sbjct: 488 ASASLQEQGRQLSEVVAFFRLRSG 511 >A4G9L0.1 A4G9L0_HERAR Methyl-accepting chemotaxis protein Length = 561 Score = 387 bits (993), Expect = e-105, Method: Compositional matrix adjust. Identities = 263/524 (50%), Positives = 338/524 (64%), Gaps = 37/524 (7%) Query: 1 MKIGTRLGGSFMLVTLLTCALIVASTLTLTQIGRHWNDFSGTVLGKQ----DYATQGYIK 56 +KIG RLG +F L+ +L + V L L + + TVL ++ + Q +IK Sbjct: 6 LKIGVRLGMAFGLLLVLMAFMTVMGVLRLQDVAK------ATVLMEEATIKERLAQQWIK 59 Query: 57 --LGDGVQNFKNYVVRGKDYDRHFLADMDAIV----RLMDQYRKLGVDNPKEEALLEKIS 110 + V+ F + D+ +M AI + D+ L V + + + LL ++ Sbjct: 60 GIETNTVRTFARVRTSDPEQDKILQQEMSAISAAVSKQQDELETLVV-SAEGKKLLATVA 118 Query: 111 NGERRY----------REAL-AKAQAMKAAGASPSEVDAAISGADKVLGAGFSGLLAIAR 159 Y REA A+ Q A P+ DA I + V+ A + Sbjct: 119 EKRATYTAIRDDVMNLREARGAELQNAIANKMKPA-ADAYIQSVEAVVNAQINNF----- 172 Query: 160 ENAGSTGEQISSAIGAGKSLSLAVGALVVVLALVLAVLATRSITQPMREAVRIAKTVAAG 219 E+A ++ + + + L + +G + + L +VLA + TRSIT+P+ AV +A+ VA+G Sbjct: 173 EDAKG---RVDTIYQSARMLLIVLGLVALTLGIVLAWMLTRSITKPLDYAVSVARLVASG 229 Query: 220 DLGSRIVVTRKDETGELLQALKEMNASLQKVVGGVREGSDTIVTASTQIAGGNLDLSART 279 DL RI V KDETG+LLQALK+MN SL + VR G DTI TAS QIA GNLDLS+RT Sbjct: 230 DLTGRITVDSKDETGQLLQALKDMNDSLTASITQVRSGVDTIATASNQIASGNLDLSSRT 289 Query: 280 EEQASSLEQTAAAMEEITSTVRRNADHARQANAMAGSVSEVASRSGLVVSDVVGTMDEIQ 339 EEQASSLE+TA++MEE+TSTV++NAD+ARQAN +A + S VA + G VVS VV TMD I Sbjct: 290 EEQASSLEETASSMEELTSTVKQNADNARQANQLAVTASGVAEKGGTVVSKVVDTMDGIN 349 Query: 340 ASAREIEEIISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAAEVRSLAQRSATAAK 399 SAR+I +II VIDGIAFQTNILALNAAVEAARAGEQGRGFAVVA+EVRSLAQRSA AAK Sbjct: 350 TSARKIVDIIGVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRSLAQRSAAAAK 409 Query: 400 EIKDLIGNSVEKIAAGSKLVQAAGATIEELVRSVRDVTQIMSEISAASGEQESGIEQVNQ 459 EIK LI +SV+K+ GSKLV AG T+ E+V SV+ VT IM+EI AAS EQ +GIEQVNQ Sbjct: 410 EIKTLIDDSVDKVDTGSKLVAEAGTTMVEVVDSVKRVTDIMAEIMAASQEQSAGIEQVNQ 469 Query: 460 AIAQMDTVTQQNAALVEEAAAATEALKAQARRLAESVSVFRLGG 503 AI QMD VTQQNAALVEEAAAA E+L QA LA++VS+F+L G Sbjct: 470 AIGQMDQVTQQNAALVEEAAAAAESLNEQAANLAQAVSIFKLDG 513 >A6T427.1 A6T427_JANMA Methyl-accepting chemotaxis protein Length = 571 Score = 386 bits (991), Expect = e-105, Method: Compositional matrix adjust. Identities = 268/542 (49%), Positives = 344/542 (63%), Gaps = 71/542 (13%) Query: 1 MKIGTRLGGSFMLVTLLTCALIVASTLTLTQIGRHWND---------FSGTVLG---KQD 48 +KIG RL SF + +L L+V +TL T+IG ND + TVL K D Sbjct: 4 LKIGQRLSLSFGSMVIL---LVVLATLAFTRIG-GLNDAISEVDGDRYPKTVLANVMKDD 59 Query: 49 Y-----------------ATQGYI-KLGDGVQNFKNYVV---------RGKDYDRHFLAD 81 A Q + ++G + N +V RG+ AD Sbjct: 60 LNQIARNMRNALLMTEKAAIQAELTQIGKATDSLNNALVELEKTVRSERGRQTIAGLQAD 119 Query: 82 MDAIVRLMDQYRKLGVDNPKEEALLEKISNGERRYREALAKAQAMKAAGASPSEVDAAIS 141 + L D + KL K+EA+ AL A+ A + + +D I Sbjct: 120 RSKFLPLKDDFIKLASAGIKDEAV-------------ALLFAEVRPAQLSYLASIDKLID 166 Query: 142 GADKVLGAGFSGLLAIARENAGSTGEQISSAIGAGKSLSLAVGALVVVLALVLAVLATRS 201 ++++ SG A NA ++ Q+ I + V++A V AVLATRS Sbjct: 167 YQNELMKK--SG----AEANAKASQTQLLIGI---------FSIIAVLIAAVFAVLATRS 211 Query: 202 ITQPMREAVRIAKTVAAGDLGSRIVVTRKDETGELLQALKEMNASLQKVVGGVREGSDTI 261 IT+P+ +AV +A+ VA GDL IVV KDETG+LLQALK+MN L K+V VR G+DTI Sbjct: 212 ITRPLSQAVVLARKVADGDLTGSIVVESKDETGQLLQALKDMNEGLLKIVTQVRLGTDTI 271 Query: 262 VTASTQIAGGNLDLSARTEEQASSLEQTAAAMEEITSTVRRNADHARQANAMAGSVSEVA 321 +AS QIA GNLDLS+RTE+QASSLE+TA++MEE+TSTV++NA++ARQ+N +A S SEVA Sbjct: 272 ASASHQIATGNLDLSSRTEQQASSLEETASSMEELTSTVKQNAENARQSNQLALSASEVA 331 Query: 322 SRSGLVVSDVVGTMDEIQASAREIEEIISVIDGIAFQTNILALNAAVEAARAGEQGRGFA 381 R G VVS VV TM EI SA++I +II VIDGIAFQTNILALNAAVEAARAGEQGRGFA Sbjct: 332 VRGGAVVSKVVDTMGEINDSAKKIVDIIGVIDGIAFQTNILALNAAVEAARAGEQGRGFA 391 Query: 382 VVAAEVRSLAQRSATAAKEIKDLIGNSVEKIAAGSKLVQAAGATIEELVRSVRDVTQIMS 441 VVA+EVR+LAQRSA+AAKEIK+LIG+SV+K++ GS+LV AGAT+ E+V SV+ VT IMS Sbjct: 392 VVASEVRTLAQRSASAAKEIKELIGDSVDKVSIGSRLVDDAGATMREVVESVKRVTDIMS 451 Query: 442 EISAASGEQESGIEQVNQAIAQMDTVTQQNAALVEEAAAATEALKAQARRLAESVSVFRL 501 EI+AAS EQ GIEQ+NQA+ QMD VTQQNAALVEEAAAA E+L+ QA L++ V VF+L Sbjct: 452 EITAASQEQTDGIEQINQAVMQMDQVTQQNAALVEEAAAAAESLQGQASHLSQVVGVFKL 511 Query: 502 GG 503 G Sbjct: 512 DG 513 >D8IY00.1 D8IY00_HERSS Methyl-accepting chemotaxis transducer transmembrane protein Length = 533 Score = 383 bits (984), Expect = e-104, Method: Compositional matrix adjust. Identities = 249/510 (48%), Positives = 337/510 (66%), Gaps = 11/510 (2%) Query: 1 MKIGTRLGGSFMLVTLLTCALIVASTLTLTQIGRHWNDFSGTVLGKQDYATQGYIKLG-D 59 +KIG RL F+ + +L ++ L IG +D + L K+ A Q + + + Sbjct: 4 LKIGVRLAIGFIALLMLMAVMVALGVWRLGSIGDATDDMTRIALKKERDAVQWHAAIKEN 63 Query: 60 GVQNFKNYVVRGKD--YDRHFLADMDAIVRLMDQYRK---LGVDNPKEEALLEKISNGER 114 GV+ F V++ D + +F +DA + Q +K + + +E+ L +++ Sbjct: 64 GVRTFA--VMKSDDDAFQAYFQKQIDAQSARISQLQKEVEAAITDAEEKRLFDEVGKLRA 121 Query: 115 RYREALAKAQAMKAAGASPSEVDAAISGADKVLGAGFSGLLAIA---RENAGSTGEQISS 171 YR +K AG + + K++ G+L A ++ T I+ Sbjct: 122 AYRATRQSIFDVKTAGDDARAREMTDTTLVKMMDDYADGVLRYADFQKQVIDQTAAAINR 181 Query: 172 AIGAGKSLSLAVGALVVVLALVLAVLATRSITQPMREAVRIAKTVAAGDLGSRIVVTRKD 231 +G+S+ LA+GA+ +VL LA L TRSIT+P+ +AV IA+TVAAGDL SRI + +D Sbjct: 182 DYRSGRSMLLALGAIEIVLGAALAWLLTRSITRPLNQAVTIAETVAAGDLTSRIDSSSRD 241 Query: 232 ETGELLQALKEMNASLQKVVGGVREGSDTIVTASTQIAGGNLDLSARTEEQASSLEQTAA 291 ETG+LL ALK MN +L +VG VR G++TI TAS +IA GNLDLSARTE QA SLE+TA+ Sbjct: 242 ETGKLLAALKTMNGNLLDIVGRVRMGTETINTASREIATGNLDLSARTEAQAGSLEETAS 301 Query: 292 AMEEITSTVRRNADHARQANAMAGSVSEVASRSGLVVSDVVGTMDEIQASAREIEEIISV 351 AME++TSTV++NAD+ARQAN +A S S+VA++ G VV VV TM I AS+++I +II V Sbjct: 302 AMEQLTSTVKQNADNARQANELAASASQVATQGGAVVDQVVATMGAIHASSQKIADIIGV 361 Query: 352 IDGIAFQTNILALNAAVEAARAGEQGRGFAVVAAEVRSLAQRSATAAKEIKDLIGNSVEK 411 IDGIAFQTNILALNAAVEAARAGEQGRGFAVVA+EVRSLAQRSA+AAKEIK LI +SVEK Sbjct: 362 IDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRSLAQRSASAAKEIKQLIDDSVEK 421 Query: 412 IAAGSKLVQAAGATIEELVRSVRDVTQIMSEISAASGEQESGIEQVNQAIAQMDTVTQQN 471 + GS+LV AG T++E+V+SV VT ++ EI+ AS EQ GIEQVN AI +D TQQN Sbjct: 422 VDDGSRLVARAGDTMQEVVQSVARVTAVVREITLASQEQSDGIEQVNLAITHIDETTQQN 481 Query: 472 AALVEEAAAATEALKAQARRLAESVSVFRL 501 AALVE+AAAA +++ QA L ++VSVFRL Sbjct: 482 AALVEQAAAAARSMQDQAASLTDAVSVFRL 511 >Q93ET6.1 Q93ET6_RAHAQ Putative methyl-accepting chemotaxis protein I Length = 554 Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust. Identities = 239/524 (45%), Positives = 341/524 (65%), Gaps = 32/524 (6%) Query: 1 MKIGTRLGGSFMLVTLLTCALIVASTLTLTQIGRHWNDFSGTVLGKQDYATQGYIKLGDG 60 M++G RLG +F LV LL LI+ S +T+I N ++ + + + DG Sbjct: 8 MRVGARLGAAFSLVILL---LIIVSVTAVTKIS-SINSSIEQIISDRYVKVRLAFDVRDG 63 Query: 61 VQNFKNYVVRGKDYDRHFLADMDAIVRLMDQYRKLGVDNPKEEAL-LEKISN------GE 113 V + Y+ R + D + +Y +L D+ K+ L ++KI+ G+ Sbjct: 64 VNDQIKYL-------RGIVIDTKNPEQNNKRYLQLD-DSVKQTNLAMDKIAAIQTTVVGK 115 Query: 114 RRYR------EALAKAQAMKAAGASPSEVDAAISGADKVLGAGFSGLLAIARENAGSTGE 167 ++ + + A+ A A ++D A + L + L +A A S + Sbjct: 116 QKIKALQDASDIFEAAKEQLVALARAGDMDGATEFVLRKLTTSQNAYLDLASAFANSQDQ 175 Query: 168 QISS----AIGAGKS---LSLAVGALVVVLALVLAVLATRSITQPMREAVRIAKTVAAGD 220 Q+ + AI G + L+L L +++A L TRSIT+P+ AV++A+ VAAGD Sbjct: 176 QLQAEGKKAIADGHNAIQLTLIFSVLAILVAAALGFFLTRSITRPLHTAVKVAENVAAGD 235 Query: 221 LGSRIVVTRKDETGELLQALKEMNASLQKVVGGVREGSDTIVTASTQIAGGNLDLSARTE 280 L ++I VT DETG+L+Q LK MN +L K+V VR G++ I +AS +IA GNLDLS+RTE Sbjct: 236 LTTQIQVTSGDETGQLMQGLKNMNENLLKIVTEVRAGTNAIHSASGEIAAGNLDLSSRTE 295 Query: 281 EQASSLEQTAAAMEEITSTVRRNADHARQANAMAGSVSEVASRSGLVVSDVVGTMDEIQA 340 +QASSLE+TA+AME++T+TV++NAD+ARQAN +A S VA + G VV +VV TM+ I A Sbjct: 296 QQASSLEETASAMEQMTATVKQNADNARQANQLAAQASRVAVQGGEVVGEVVNTMEGINA 355 Query: 341 SAREIEEIISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAAEVRSLAQRSATAAKE 400 S+R+I +II+VIDGIAFQTNILALNAAVEAARAGEQGRGFAVVA+EVR+LAQRSA+AAKE Sbjct: 356 SSRKIVDIIAVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRNLAQRSASAAKE 415 Query: 401 IKDLIGNSVEKIAAGSKLVQAAGATIEELVRSVRDVTQIMSEISAASGEQESGIEQVNQA 460 IK LI +SV K+ G++LV AG+T+ E+V SV+ VT I+ EI+ AS EQ +GIE++N+A Sbjct: 416 IKVLIDDSVAKVDNGTQLVAKAGSTMAEVVSSVKSVTDIVGEIAIASNEQSTGIEEINKA 475 Query: 461 IAQMDTVTQQNAALVEEAAAATEALKAQARRLAESVSVFRLGGG 504 I QMD VTQQNAALV+EA++A +L QA RL++++S+F++ G Sbjct: 476 ITQMDEVTQQNAALVQEASSAAYSLNEQAERLSQAISIFKVSAG 519 >A6T1W8.1 A6T1W8_JANMA Methyl-accepting chemotaxis protein Length = 567 Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust. Identities = 215/327 (65%), Positives = 271/327 (82%) Query: 175 AGKSLSLAVGALVVVLALVLAVLATRSITQPMREAVRIAKTVAAGDLGSRIVVTRKDETG 234 +G+++ + +G++ ++L+ LA L +RSIT+P+ AV +A+TVA+GDL ++I + DETG Sbjct: 189 SGRTILITLGSIALILSAFLAWLLSRSITRPLDYAVSVARTVASGDLRNKIQSSSNDETG 248 Query: 235 ELLQALKEMNASLQKVVGGVREGSDTIVTASTQIAGGNLDLSARTEEQASSLEQTAAAME 294 +LL+AL++MN L + V VR G +TI TAS QIA GNLDLS+RTEEQASSLE+TA++ME Sbjct: 249 QLLRALRDMNDGLVQSVSQVRTGIETIATASNQIAAGNLDLSSRTEEQASSLEETASSME 308 Query: 295 EITSTVRRNADHARQANAMAGSVSEVASRSGLVVSDVVGTMDEIQASAREIEEIISVIDG 354 E+TSTV++NAD+ARQAN +A S S VA + G VVS VV TM++I ASA++I +II VIDG Sbjct: 309 ELTSTVKQNADNARQANQLAVSASGVAEKGGEVVSRVVDTMEQINASAKKIVDIIGVIDG 368 Query: 355 IAFQTNILALNAAVEAARAGEQGRGFAVVAAEVRSLAQRSATAAKEIKDLIGNSVEKIAA 414 IAFQTNILALNAAVEAARAGEQGRGFAVVA+EVR+LAQRSA AAKEIK LIG+SV+K+ Sbjct: 369 IAFQTNILALNAAVEAARAGEQGRGFAVVASEVRNLAQRSAAAAKEIKTLIGDSVDKVEL 428 Query: 415 GSKLVQAAGATIEELVRSVRDVTQIMSEISAASGEQESGIEQVNQAIAQMDTVTQQNAAL 474 GSKLV AG T++E+V+SV+ VT IMSEI AAS EQ +GIEQVNQAI QMD VTQQNAAL Sbjct: 429 GSKLVGEAGVTMDEVVQSVKHVTDIMSEIMAASQEQSAGIEQVNQAIGQMDQVTQQNAAL 488 Query: 475 VEEAAAATEALKAQARRLAESVSVFRL 501 VEEAAAA E+L QA +LAE+VSVF+L Sbjct: 489 VEEAAAAAESLNEQAAKLAEAVSVFKL 515 >C5CXU6.1 C5CXU6_VARPS Methyl-accepting chemotaxis sensory transducer Length = 559 Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust. Identities = 261/519 (50%), Positives = 333/519 (64%), Gaps = 17/519 (3%) Query: 1 MKIGTRLGGSFMLVTLLTCALIVASTLTLTQIGRHWNDFSGTVLGKQDYATQGYIKLG-D 59 +KIGTRLG F LV L + L +G + L K+ A + + Sbjct: 4 LKIGTRLGIGFALVLALMACIAGIGVFRLQGVGDAVQEMVQRSLVKERLAANWLLNTSSN 63 Query: 60 GVQNF---KNYVVRGKDYDRHFLADMDAIVRLMDQYRKLGVDNPKEEALLEKISNGERRY 116 V+ F K+ +DY + ++ A + + +D+P+E+A+ I +Y Sbjct: 64 SVRTFALVKSNDAEVQDYLQKQMSKTSAGISETQAKLEAMLDSPEEQAISADIKEKRSQY 123 Query: 117 ---REALAKAQAMKAAGASPSEVDAAISGAD-----KVLGAGFSGLLAIARENAGSTGEQ 168 R + K +KA G E AA++ +V A G+L E + Sbjct: 124 VGLRNTILK---LKAEG--KQEEAAALTNGKLVPMLEVYDASIRGMLTHQAERIDKAADA 178 Query: 169 ISSAIGAGKSLSLAVGALVVVLALVLAVLATRSITQPMREAVRIAKTVAAGDLGSRIVVT 228 + S AG+ + + ++L VLA L TRSIT+P+ EAVR+A+TVA GDL SRI + Sbjct: 179 VDSLNRAGRMNVIVLAMAALLLGGVLAWLLTRSITRPLNEAVRVAQTVADGDLTSRIESS 238 Query: 229 RKDETGELLQALKEMNASLQKVVGGVREGSDTIVTASTQIAGGNLDLSARTEEQASSLEQ 288 +DETG+L+ ALK MNASL VV GVR+G+D I TAS +IA GN DLS+RTEEQASSLEQ Sbjct: 239 SRDETGQLMLALKNMNASLATVVSGVRQGTDAIATASGEIAAGNQDLSSRTEEQASSLEQ 298 Query: 289 TAAAMEEITSTVRRNADHARQANAMAGSVSEVASRSGLVVSDVVGTMDEIQASAREIEEI 348 TAA+MEE+TSTV++NAD+ARQAN +A S SEVA + G VV VV TM I AS+++I +I Sbjct: 299 TAASMEELTSTVKQNADNARQANQLALSASEVAVKGGNVVGQVVDTMASINASSKKIVDI 358 Query: 349 ISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAAEVRSLAQRSATAAKEIKDLIGNS 408 I VIDGIAFQTNILALNAAVEAARAGEQGRGFAVVA+EVR+LAQRS AAKEIK LI +S Sbjct: 359 IGVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRNLAQRSGAAAKEIKGLIDDS 418 Query: 409 VEKIAAGSKLVQAAGATIEELVRSVRDVTQIMSEISAASGEQESGIEQVNQAIAQMDTVT 468 V K+ GS LV AG T+ E+V SV+ VT I+ EI+AAS EQ +GIEQVNQAIAQMD VT Sbjct: 419 VGKVDMGSALVGEAGKTMAEIVGSVKRVTDIIGEITAASQEQSTGIEQVNQAIAQMDQVT 478 Query: 469 QQNAALVEEAAAATEALKAQARRLAESVSVFRLGGGQMA 507 QQNAALVEEAAAA ++++ QA L +VSVFRL G A Sbjct: 479 QQNAALVEEAAAAAQSMQEQAASLVGAVSVFRLDGAPAA 517