BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0031.0028.p (230 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value D8ISP1.1 D8ISP1_HERSS Protocatechuate 3,4-dioxygenase beta chain... 477 e-133 C5AI62.1 C5AI62_BURGB Protocatechuate 3,4-dioxygenase beta-subunit 288 4e-76 A9AL24.1 A9AL24_BURM1 Protocatechuate 3,4-dioxygenase, beta subu... 288 5e-76 B9C309.1 B9C309_9BURK Protocatechuate 3,4-dioxygenase, beta subu... 288 5e-76 B9BJ01.1 B9BJ01_9BURK Protocatechuate 3,4-dioxygenase, beta subu... 288 5e-76 B9B725.1 B9B725_9BURK Protocatechuate 3,4-dioxygenase, beta subu... 288 5e-76 Q2T683.1 Q2T683_BURTA Protocatechuate 3,4-dioxygenase, beta subunit 286 1e-75 F0G173.1 F0G173_9BURK Protocatechuate 3,4-dioxygenase, beta subunit 285 3e-75 P15110.1 PCXB_BURCE Protocatechuate 3,4-dioxygenase beta chain E... 285 3e-75 Q1BMS4.1 Q1BMS4_BURCA Protocatechuate 3,4-dioxygenase, beta subunit 285 5e-75 >D8ISP1.1 D8ISP1_HERSS Protocatechuate 3,4-dioxygenase beta chain protein EC=1.13.11.3 Length = 230 Score = 477 bits (1228), Expect = e-133, Method: Compositional matrix adjust. Identities = 229/230 (99%), Positives = 230/230 (100%) Query: 1 MQFDAIEPGVYPELIYPPYKSTVKRGPTQAPLRVRDEIATGTNLFASPKLILPHDMDLTK 60 MQFDAIEPGVYPELIYPPYKSTVKRGPTQAPLRVRDEIATGTNLFASPKLILPHDMDLTK Sbjct: 1 MQFDAIEPGVYPELIYPPYKSTVKRGPTQAPLRVRDEIATGTNLFASPKLILPHDMDLTK 60 Query: 61 QGRGEPLGEKIVVTGRVVDEDGKPVRNSLLEVWQCNAAGRYFHKKDQHDAPLDPNFTGFG 120 QG+GEPLGEKIVVTGRVVDEDGKPVRNSLLEVWQCNAAGRYFHKKDQHDAPLDPNFTGFG Sbjct: 61 QGKGEPLGEKIVVTGRVVDEDGKPVRNSLLEVWQCNAAGRYFHKKDQHDAPLDPNFTGFG 120 Query: 121 KMLTDDNGRYRFVSIKPGPYPWGNHHKAWRPAHIHFSLFGNVYAQRLVTQMYFPNDPLFA 180 KMLTDDNGRYRFVSIKPGPYPWGNHHKAWRPAHIHFSLFGNVYAQRLVTQMYFPNDPLFA Sbjct: 121 KMLTDDNGRYRFVSIKPGPYPWGNHHKAWRPAHIHFSLFGNVYAQRLVTQMYFPNDPLFA 180 Query: 181 YDPIFQSIPDEAARQRLISRFSLEETVDDKMLGYEFDIVLRGRNATPMGI 230 YDPIFQSIPDEAARQRLISRFSLEETVDDKMLGYEFDIVLRGRNATPMGI Sbjct: 181 YDPIFQSIPDEAARQRLISRFSLEETVDDKMLGYEFDIVLRGRNATPMGI 230 >C5AI62.1 C5AI62_BURGB Protocatechuate 3,4-dioxygenase beta-subunit Length = 234 Score = 288 bits (737), Expect = 4e-76, Method: Compositional matrix adjust. Identities = 145/223 (65%), Positives = 170/223 (76%), Gaps = 9/223 (4%) Query: 11 YPELIYPPYKSTVKRGPTQ--APLR--VRDEIATGTNLFASPKL-ILPHDMDLTKQGRGE 65 +P ++P Y+S+VKRGPTQ PLR +RD+ ++ S L L HD+ GE Sbjct: 14 HPAYVHPDYRSSVKRGPTQPLVPLRERLRDQRVP---VYGSDDLGALDHDLTRNAMKNGE 70 Query: 66 PLGEKIVVTGRVVDEDGKPVRNSLLEVWQCNAAGRYFHKKDQHDAPLDPNFTGFGKMLTD 125 PLGE+I+VTGRV+DE GKPVRN+L+EVWQ NAAGRY HK D+HDAPLDPNF G G+ LTD Sbjct: 71 PLGERIIVTGRVLDEGGKPVRNTLVEVWQANAAGRYVHKADRHDAPLDPNFLGAGRCLTD 130 Query: 126 DNGRYRFVSIKPGPYPWGNHHKAWRPAHIHFSLFGNVYAQRLVTQMYFPNDPLFAYDPIF 185 D GRYRF++IKPG YPWGNH AWRP HIHFSLFG+ + RLVTQMYFP DPL YDPIF Sbjct: 131 DQGRYRFLTIKPGAYPWGNHTNAWRPNHIHFSLFGDYFGSRLVTQMYFPGDPLLQYDPIF 190 Query: 186 QSIPDEAARQRLISRFSLEETVDDKMLGYEFDIVLRGRNATPM 228 Q P EAAR+RL+SRFSLE T + LGYEFDIVLRGR+ATPM Sbjct: 191 QGTP-EAARERLVSRFSLEVTEESYALGYEFDIVLRGRDATPM 232 >A9AL24.1 A9AL24_BURM1 Protocatechuate 3,4-dioxygenase, beta subunit EC=1.13.11.3 Length = 235 Score = 288 bits (736), Expect = 5e-76, Method: Compositional matrix adjust. Identities = 142/220 (64%), Positives = 170/220 (77%), Gaps = 3/220 (1%) Query: 11 YPELIYPPYKSTVKRGPTQAPLRVRDEIATGTNLFASPKLILPHDMDLTKQG--RGEPLG 68 +P ++P Y+S+VKRGPT+ + +++++ + + P D DLTK GEPLG Sbjct: 15 HPAYVHPEYRSSVKRGPTRPLIPLKEKLRDQYAPVYGAEDLGPLDHDLTKNAVKNGEPLG 74 Query: 69 EKIVVTGRVVDEDGKPVRNSLLEVWQCNAAGRYFHKKDQHDAPLDPNFTGFGKMLTDDNG 128 E+IVVTGRV+DE GKPVRN+L+EVWQ NAAGRY HK DQHDAPLDPNF G G+ LTDD G Sbjct: 75 ERIVVTGRVLDEGGKPVRNTLVEVWQANAAGRYVHKVDQHDAPLDPNFLGAGRCLTDDEG 134 Query: 129 RYRFVSIKPGPYPWGNHHKAWRPAHIHFSLFGNVYAQRLVTQMYFPNDPLFAYDPIFQSI 188 RYRF++IKPG YPWGNH AWRP HIHFSLFG+ + RLVTQMYFP DPL AYDPIFQ Sbjct: 135 RYRFLTIKPGAYPWGNHPNAWRPNHIHFSLFGDYFGSRLVTQMYFPGDPLLAYDPIFQGT 194 Query: 189 PDEAARQRLISRFSLEETVDDKMLGYEFDIVLRGRNATPM 228 P EAAR+RLISRFS++ T + LGYEFDIVLRGR+ATPM Sbjct: 195 P-EAARERLISRFSMDITEEGYALGYEFDIVLRGRDATPM 233 >B9C309.1 B9C309_9BURK Protocatechuate 3,4-dioxygenase, beta subunit EC=1.13.11.3 Length = 235 Score = 288 bits (736), Expect = 5e-76, Method: Compositional matrix adjust. Identities = 142/220 (64%), Positives = 170/220 (77%), Gaps = 3/220 (1%) Query: 11 YPELIYPPYKSTVKRGPTQAPLRVRDEIATGTNLFASPKLILPHDMDLTKQG--RGEPLG 68 +P ++P Y+S+VKRGPT+ + +++++ + + P D DLTK GEPLG Sbjct: 15 HPAYVHPEYRSSVKRGPTRPLIPLKEKLRDQYAPVYGAEDLGPLDHDLTKNAVKNGEPLG 74 Query: 69 EKIVVTGRVVDEDGKPVRNSLLEVWQCNAAGRYFHKKDQHDAPLDPNFTGFGKMLTDDNG 128 E+IVVTGRV+DE GKPVRN+L+EVWQ NAAGRY HK DQHDAPLDPNF G G+ LTDD G Sbjct: 75 ERIVVTGRVLDEGGKPVRNTLVEVWQANAAGRYVHKVDQHDAPLDPNFLGAGRCLTDDEG 134 Query: 129 RYRFVSIKPGPYPWGNHHKAWRPAHIHFSLFGNVYAQRLVTQMYFPNDPLFAYDPIFQSI 188 RYRF++IKPG YPWGNH AWRP HIHFSLFG+ + RLVTQMYFP DPL AYDPIFQ Sbjct: 135 RYRFLTIKPGAYPWGNHPNAWRPNHIHFSLFGDYFGSRLVTQMYFPGDPLLAYDPIFQGT 194 Query: 189 PDEAARQRLISRFSLEETVDDKMLGYEFDIVLRGRNATPM 228 P EAAR+RLISRFS++ T + LGYEFDIVLRGR+ATPM Sbjct: 195 P-EAARERLISRFSMDITEEGYALGYEFDIVLRGRDATPM 233 >B9BJ01.1 B9BJ01_9BURK Protocatechuate 3,4-dioxygenase, beta subunit EC=1.13.11.3 Length = 235 Score = 288 bits (736), Expect = 5e-76, Method: Compositional matrix adjust. Identities = 142/220 (64%), Positives = 170/220 (77%), Gaps = 3/220 (1%) Query: 11 YPELIYPPYKSTVKRGPTQAPLRVRDEIATGTNLFASPKLILPHDMDLTKQG--RGEPLG 68 +P ++P Y+S+VKRGPT+ + +++++ + + P D DLTK GEPLG Sbjct: 15 HPAYVHPEYRSSVKRGPTRPLIPLKEKLRDQYAPVYGAEDLGPLDHDLTKNAVKNGEPLG 74 Query: 69 EKIVVTGRVVDEDGKPVRNSLLEVWQCNAAGRYFHKKDQHDAPLDPNFTGFGKMLTDDNG 128 E+IVVTGRV+DE GKPVRN+L+EVWQ NAAGRY HK DQHDAPLDPNF G G+ LTDD G Sbjct: 75 ERIVVTGRVLDEGGKPVRNTLVEVWQANAAGRYVHKVDQHDAPLDPNFLGAGRCLTDDEG 134 Query: 129 RYRFVSIKPGPYPWGNHHKAWRPAHIHFSLFGNVYAQRLVTQMYFPNDPLFAYDPIFQSI 188 RYRF++IKPG YPWGNH AWRP HIHFSLFG+ + RLVTQMYFP DPL AYDPIFQ Sbjct: 135 RYRFLTIKPGAYPWGNHPNAWRPNHIHFSLFGDYFGSRLVTQMYFPGDPLLAYDPIFQGT 194 Query: 189 PDEAARQRLISRFSLEETVDDKMLGYEFDIVLRGRNATPM 228 P EAAR+RLISRFS++ T + LGYEFDIVLRGR+ATPM Sbjct: 195 P-EAARERLISRFSMDITEEGYALGYEFDIVLRGRDATPM 233 >B9B725.1 B9B725_9BURK Protocatechuate 3,4-dioxygenase, beta subunit EC=1.13.11.3 Length = 235 Score = 288 bits (736), Expect = 5e-76, Method: Compositional matrix adjust. Identities = 142/220 (64%), Positives = 170/220 (77%), Gaps = 3/220 (1%) Query: 11 YPELIYPPYKSTVKRGPTQAPLRVRDEIATGTNLFASPKLILPHDMDLTKQG--RGEPLG 68 +P ++P Y+S+VKRGPT+ + +++++ + + P D DLTK GEPLG Sbjct: 15 HPAYVHPEYRSSVKRGPTRPLIPLKEKLRDQYAPVYGAEDLGPLDHDLTKNAVKNGEPLG 74 Query: 69 EKIVVTGRVVDEDGKPVRNSLLEVWQCNAAGRYFHKKDQHDAPLDPNFTGFGKMLTDDNG 128 E+IVVTGRV+DE GKPVRN+L+EVWQ NAAGRY HK DQHDAPLDPNF G G+ LTDD G Sbjct: 75 ERIVVTGRVLDEGGKPVRNTLVEVWQANAAGRYVHKVDQHDAPLDPNFLGAGRCLTDDEG 134 Query: 129 RYRFVSIKPGPYPWGNHHKAWRPAHIHFSLFGNVYAQRLVTQMYFPNDPLFAYDPIFQSI 188 RYRF++IKPG YPWGNH AWRP HIHFSLFG+ + RLVTQMYFP DPL AYDPIFQ Sbjct: 135 RYRFLTIKPGAYPWGNHPNAWRPNHIHFSLFGDYFGSRLVTQMYFPGDPLLAYDPIFQGT 194 Query: 189 PDEAARQRLISRFSLEETVDDKMLGYEFDIVLRGRNATPM 228 P EAAR+RLISRFS++ T + LGYEFDIVLRGR+ATPM Sbjct: 195 P-EAARERLISRFSMDITEEGYALGYEFDIVLRGRDATPM 233 >Q2T683.1 Q2T683_BURTA Protocatechuate 3,4-dioxygenase, beta subunit Length = 234 Score = 286 bits (733), Expect = 1e-75, Method: Compositional matrix adjust. Identities = 142/220 (64%), Positives = 168/220 (76%), Gaps = 3/220 (1%) Query: 11 YPELIYPPYKSTVKRGPTQAPLRVRDEIATGTNLFASPKLILPHDMDLTKQG--RGEPLG 68 +P I+PPY+S+VKRGPTQ + +++++ + P D DLTK GEPLG Sbjct: 14 HPAYIHPPYRSSVKRGPTQPLIPLKEKLRNQHAPVYGADDLGPLDHDLTKNAAKNGEPLG 73 Query: 69 EKIVVTGRVVDEDGKPVRNSLLEVWQCNAAGRYFHKKDQHDAPLDPNFTGFGKMLTDDNG 128 E+IVVTGRV+DE GKPVRN+L+EVWQ NAAGRY HK D+HDAPLDPNF G G+ LTD+NG Sbjct: 74 ERIVVTGRVLDEGGKPVRNTLVEVWQANAAGRYVHKVDRHDAPLDPNFLGAGRCLTDENG 133 Query: 129 RYRFVSIKPGPYPWGNHHKAWRPAHIHFSLFGNVYAQRLVTQMYFPNDPLFAYDPIFQSI 188 RYRF++IKPG YPWGNH AWRP HIHFSLFG+ + RLVTQMYFP DPL A DPIFQ Sbjct: 134 RYRFLTIKPGAYPWGNHPNAWRPNHIHFSLFGDYFGSRLVTQMYFPGDPLLALDPIFQGT 193 Query: 189 PDEAARQRLISRFSLEETVDDKMLGYEFDIVLRGRNATPM 228 P E AR RLISRFS++ T + LGYEFDIVLRGR+ATPM Sbjct: 194 P-EDARDRLISRFSIDTTEEGFALGYEFDIVLRGRDATPM 232 >F0G173.1 F0G173_9BURK Protocatechuate 3,4-dioxygenase, beta subunit Length = 235 Score = 285 bits (730), Expect = 3e-75, Method: Compositional matrix adjust. Identities = 146/223 (65%), Positives = 171/223 (76%), Gaps = 9/223 (4%) Query: 11 YPELIYPPYKSTVKRGPTQ--APLR--VRDEIATGTNLFASPKL-ILPHDMDLTKQGRGE 65 +P I+P Y+S+VKRGPT+ PL+ +RD+ A ++ + L L HD+ GE Sbjct: 15 HPAYIHPEYRSSVKRGPTRPLIPLKEKLRDQYAP---VYGAEDLGALDHDLTKNAVKNGE 71 Query: 66 PLGEKIVVTGRVVDEDGKPVRNSLLEVWQCNAAGRYFHKKDQHDAPLDPNFTGFGKMLTD 125 PLGE+IVVTGRV+DE GKPVRN+L+EVWQ NAAGRY HK DQHDAPLDPNF G G+ LTD Sbjct: 72 PLGERIVVTGRVLDEGGKPVRNTLVEVWQANAAGRYVHKVDQHDAPLDPNFLGAGRCLTD 131 Query: 126 DNGRYRFVSIKPGPYPWGNHHKAWRPAHIHFSLFGNVYAQRLVTQMYFPNDPLFAYDPIF 185 D GRYRF++IKPG YPWGNH AWRP HIHFSLFG+ + RLVTQMYFP DPL AYDPIF Sbjct: 132 DEGRYRFLTIKPGAYPWGNHPNAWRPNHIHFSLFGDYFGSRLVTQMYFPGDPLLAYDPIF 191 Query: 186 QSIPDEAARQRLISRFSLEETVDDKMLGYEFDIVLRGRNATPM 228 Q P EAAR RLISRFS++ T + LGYEFDIVLRGR+ATPM Sbjct: 192 QGTP-EAARDRLISRFSMDITEEGYALGYEFDIVLRGRDATPM 233 >P15110.1 PCXB_BURCE Protocatechuate 3,4-dioxygenase beta chain EC=1.13.11.3 Length = 235 Score = 285 bits (730), Expect = 3e-75, Method: Compositional matrix adjust. Identities = 141/220 (64%), Positives = 167/220 (75%), Gaps = 3/220 (1%) Query: 11 YPELIYPPYKSTVKRGPTQAPLRVRDEIATGTNLFASPKLILPHDMDLTKQG--RGEPLG 68 +P ++P Y+S+VKRGPT+ + +++ + + + P D DLTK GEPLG Sbjct: 15 HPAYVHPDYRSSVKRGPTRPMIPLKERLRDQYAPVYGAEDLGPLDHDLTKNAVKNGEPLG 74 Query: 69 EKIVVTGRVVDEDGKPVRNSLLEVWQCNAAGRYFHKKDQHDAPLDPNFTGFGKMLTDDNG 128 E+IVVTGRV+DE GKPVRN+L+EVWQ NAAGRY HK DQHDAPLDPNF G G+ +TD G Sbjct: 75 ERIVVTGRVLDEGGKPVRNTLVEVWQANAAGRYVHKVDQHDAPLDPNFLGAGRCMTDAEG 134 Query: 129 RYRFVSIKPGPYPWGNHHKAWRPAHIHFSLFGNVYAQRLVTQMYFPNDPLFAYDPIFQSI 188 RYRF++IKPG YPWGNH AWRP HIHFSLFG+ + RLVTQMYFP DPL AYDPIFQ Sbjct: 135 RYRFLTIKPGAYPWGNHPNAWRPNHIHFSLFGDYFGSRLVTQMYFPGDPLLAYDPIFQGT 194 Query: 189 PDEAARQRLISRFSLEETVDDKMLGYEFDIVLRGRNATPM 228 P EAAR RLISRFSL+ T + LGYEFDIVLRGR+ATPM Sbjct: 195 P-EAARDRLISRFSLDTTEEGHALGYEFDIVLRGRDATPM 233 >Q1BMS4.1 Q1BMS4_BURCA Protocatechuate 3,4-dioxygenase, beta subunit Length = 235 Score = 285 bits (728), Expect = 5e-75, Method: Compositional matrix adjust. Identities = 144/223 (64%), Positives = 172/223 (77%), Gaps = 9/223 (4%) Query: 11 YPELIYPPYKSTVKRGPTQ--APLR--VRDEIATGTNLFASPKL-ILPHDMDLTKQGRGE 65 +P ++P Y+S+VKRGPT+ PL+ +RD+ A ++ + L L HD+ GE Sbjct: 15 HPAYVHPEYRSSVKRGPTRPLIPLKEKLRDQYAP---VYGAEDLGALDHDLTKNAVKNGE 71 Query: 66 PLGEKIVVTGRVVDEDGKPVRNSLLEVWQCNAAGRYFHKKDQHDAPLDPNFTGFGKMLTD 125 PLGE++VVTGRV+DE GKPVRN+L+EVWQ NAAGRY HK DQHDAPLDPNF G G+ LTD Sbjct: 72 PLGERMVVTGRVLDEGGKPVRNTLVEVWQANAAGRYVHKVDQHDAPLDPNFLGAGRCLTD 131 Query: 126 DNGRYRFVSIKPGPYPWGNHHKAWRPAHIHFSLFGNVYAQRLVTQMYFPNDPLFAYDPIF 185 D GRYRF++IKPG YPWGNH AWRP HIHFSLFG+ + RLVTQMYFP DPL AYDPIF Sbjct: 132 DEGRYRFLTIKPGAYPWGNHPNAWRPNHIHFSLFGDYFGSRLVTQMYFPGDPLLAYDPIF 191 Query: 186 QSIPDEAARQRLISRFSLEETVDDKMLGYEFDIVLRGRNATPM 228 Q P EAAR+RLISRFS++ T + LGYEFDIVLRGR+ATPM Sbjct: 192 QGTP-EAARERLISRFSMDITEEGYALGYEFDIVLRGRDATPM 233