BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0031.0024.p (285 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value D8ISN7.1 D8ISN7_HERSS CAAX protease family (Abortive protein) pr... 498 e-139 Q3IHK2.1 Q3IHK2_PSEHT Putative uncharacterized protein 151 8e-35 B6R597.1 B6R597_9RHOB Caax amino terminal protease family 146 3e-33 E6RGV3.1 E6RGV3_PSEU9 Putative uncharacterized protein 141 9e-32 Q4UM62.1 Q4UM62_RICFE Putative uncharacterized protein 137 2e-30 B5WR12.1 B5WR12_9BURK Abortive infection protein 134 2e-29 D5WFU7.1 D5WFU7_BURSC Abortive infection protein 124 1e-26 Q884S3.1 Q884S3_PSESM CAAX amino terminal protease family protein 122 4e-26 E2M9Q4.1 E2M9Q4_PSESM CAAX amino terminal protease family protein 122 5e-26 B2JUG9.1 B2JUG9_BURP8 Abortive infection protein 119 3e-25 >D8ISN7.1 D8ISN7_HERSS CAAX protease family (Abortive protein) protein Length = 342 Score = 498 bits (1281), Expect = e-139, Method: Compositional matrix adjust. Identities = 278/285 (97%), Positives = 280/285 (98%) Query: 1 MPSFIVLMLAICAVWLPALRLTRLSVPPWLPLLLLAVTMGWLDGQLKAVAVLGIVVLGTL 60 MPSFIVLMLAICAVWLPALRLTRLSVPPW+PLLLLAVTMGWLDGQLKAVAVLGIVVLGTL Sbjct: 58 MPSFIVLMLAICAVWLPALRLTRLSVPPWMPLLLLAVTMGWLDGQLKAVAVLGIVVLGTL 117 Query: 61 AWGSTHALHAWQRRSLLVLALLLALLMALHRWPGFINTLVVPPTHITADARPFMLYANFD 120 AWGSTHALHAWQRR LL+LALLLALLMALHRWPGFINTLVVPPTHITADARPFMLYANFD Sbjct: 118 AWGSTHALHAWQRRCLLMLALLLALLMALHRWPGFINTLVVPPTHITADARPFMLYANFD 177 Query: 121 KGVAGLLLLALLVPRCHARREWQDVLRLTLLPGLVTIALVMGLGWLIGLISPNLKWPGFT 180 KGVAGLLLLALL PRCHA REWQ LRLTLLPGLVTIALVMGLGWLIGLISPNLKWPGFT Sbjct: 178 KGVAGLLLLALLAPRCHAWREWQGALRLTLLPGLVTIALVMGLGWLIGLISPNLKWPGFT 237 Query: 181 PPFLAINLLLTVVAEEAFFRGVLQHRLQQAWQGLRGGAVLALILSAVLFGAAHLGGGLAY 240 PPFLAINLLLTVVAEEAFFRGVLQHRLQQAWQGLRGGAVLALILSAVLFGAAHLGGGLAY Sbjct: 238 PPFLAINLLLTVVAEEAFFRGVLQHRLQQAWQGLRGGAVLALILSAVLFGAAHLGGGLAY 297 Query: 241 AALATVAGAGYGWVFQRTGRIEAAIVLHFALNAVHFIGFTYPALA 285 AALATVAGAGYGWVFQRTGRIEAAIVLHFALNAVHFIGFTYPALA Sbjct: 298 AALATVAGAGYGWVFQRTGRIEAAIVLHFALNAVHFIGFTYPALA 342 >Q3IHK2.1 Q3IHK2_PSEHT Putative uncharacterized protein Length = 291 Score = 151 bits (382), Expect = 8e-35, Method: Compositional matrix adjust. Identities = 104/287 (36%), Positives = 157/287 (54%), Gaps = 6/287 (2%) Query: 3 SFIVLMLAICAVWLPALRLTRLSVPPWLPLLLLAVTMGWLDGQLKAVAVLGIVVLGTLAW 62 +F +L L+I V+ P +++ + P W L+ L+V + +G + +L + L Sbjct: 2 TFYLLALSIICVF-PYCKVSIIRQPLWHYLMALSVICAYFEGYINLYGLLSTGLYVALYH 60 Query: 63 GSTHALHAWQRRSLLVLALLLALLMALHRWPGFINTLVVPPTHITADARPFMLYANFDKG 122 H R L + ++ +L +ALH PGF N + HIT+DA F LYANFDK Sbjct: 61 FVLHIKQTIIRAILSTVFIVSSLALALHWVPGFNNLPIAINEHITSDAIAFTLYANFDKA 120 Query: 123 VAGLLLLALLV----PRCHARREWQDVLRLTLLPGLVTIALVMGLGWLIGLISPNLKWPG 178 +AGL L A P ++ ++ +L + TI + ++GL+S N K P Sbjct: 121 MAGLFLCAYFYSNIKPLKAESKKTTSLINPPILIIITTILAALTAALMLGLVSFNPKVPD 180 Query: 179 FTPPFLAINLLLTVVAEEAFFRGVLQHRLQQAWQGLRGGAVLALILSAVLFGAAHLGGGL 238 F F+AINLL T VAEEA FRG+LQ +L Q R A+ A +++A +F AH GG+ Sbjct: 181 FWLAFIAINLLFTCVAEEALFRGLLQTKLSQIITPTRL-AIFAPVITAGIFALAHFAGGV 239 Query: 239 AYAALATVAGAGYGWVFQRTGRIEAAIVLHFALNAVHFIGFTYPALA 285 +Y ++ +AG GYG+VF +T R+E AI+ H+ +N HF FTYP L+ Sbjct: 240 SYVLVSFIAGLGYGYVFYKTQRLEWAILCHWLVNICHFFLFTYPMLS 286 >B6R597.1 B6R597_9RHOB Caax amino terminal protease family Length = 285 Score = 146 bits (368), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 103/285 (36%), Positives = 152/285 (53%), Gaps = 5/285 (1%) Query: 1 MPSFIVLMLAICAVWLPALRLTRLSVPPWLPLLLLAVTMGWLDGQLKAVAVLGIVVLGTL 60 + ++++L LAI +V P + R+ + + L+LAV G L+ + VL V+ Sbjct: 5 LSAYLILGLAIASV--PFITQPRVPLALFALSLILAVIAGILNTT-GLLLVLSWAVVSAF 61 Query: 61 AWGSTHALHAWQRRSLLVLALLLALLMALHRWPGFINTLVVPPTHITADARPFMLYANFD 120 + H + W ++ L LL L+ H PGF N V+ + DA P+ LY NFD Sbjct: 62 LFKQKHPV--WLYYVMVALLLLAGHLVMKHEAPGFHNLQVLSDVKTSPDAVPYSLYLNFD 119 Query: 121 KGVAGLLLLALLVPRCHARREWQDVLRLTLLPGLVTIALVMGLGWLIGLISPNLKWPGFT 180 K G LL PR + +EW LR+TLL + T A+++G + GL+ + K F Sbjct: 120 KAALGFLLFLFAAPRMRSAKEWLRSLRITLLFFIPTAAVLIGATYAAGLVVLDPKLVSFL 179 Query: 181 PPFLAINLLLTVVAEEAFFRGVLQHRLQQAWQGLRGGAVLALILSAVLFGAAHLGGGLAY 240 P ++ NLL T VAEEAFFR + ++ + AL++S++ F HL GGL Y Sbjct: 180 PVWMFANLLFTCVAEEAFFRQFIMGQIMEKLGRSFWAGTAALVISSLHFAYYHLEGGLPY 239 Query: 241 AALATVAGAGYGWVFQRTGRIEAAIVLHFALNAVHFIGFTYPALA 285 AA + VAG YG F ++GR+EAAI +HF +N H + FTYP LA Sbjct: 240 AAFSFVAGLFYGATFWKSGRLEAAIAVHFLVNLTHILFFTYPMLA 284 >E6RGV3.1 E6RGV3_PSEU9 Putative uncharacterized protein Length = 283 Score = 141 bits (356), Expect = 9e-32, Method: Compositional matrix adjust. Identities = 108/294 (36%), Positives = 153/294 (52%), Gaps = 26/294 (8%) Query: 3 SFIVLMLAICAVWLPALRLTRLSVPPWLPLLLLAVTMGWLDG--QLKAVAVLGIVVLGTL 60 +F L AI V+ P +L+ P W LLLL++ + L AVAV+ + V Sbjct: 2 TFYFLAAAILCVF-PQCKLSVFRQPLWRYLLLLSIISAYYQEYINLNAVAVIAVYV---- 56 Query: 61 AWGSTH----ALHAWQRRSLLVLALLLALLMALHRWPGFINTLVVPPTHITADARPFMLY 116 G H A A +R L L + +L +ALH + GF N +V IT++A F LY Sbjct: 57 --GLFHFTLLATSALKRNVLTSLFITASLGLALHWFAGFNNLPIVVNEQITSNAIAFTLY 114 Query: 117 ANFDKGVAGLLLLALLVPRCHARREWQD-----VLRLTLLPGLVTIALVMGLGWLIGLIS 171 ANFDK +AGL+L A + + + ++ +T+L L+T + L+ Sbjct: 115 ANFDKALAGLILAAYVFEKNKTAKPVTIGYPALIIVITILAALIT-------ALTLNLVE 167 Query: 172 PNLKWPGFTPPFLAINLLLTVVAEEAFFRGVLQHRLQQAWQGLRGGAVLALILSAVLFGA 231 K P F F+AINLL T VAEEA FRGV+Q +L + R A+LA +S +F Sbjct: 168 FAPKVPEFWLLFIAINLLFTCVAEEALFRGVIQTKLSKLITPSRF-ALLAPAISTCVFSL 226 Query: 232 AHLGGGLAYAALATVAGAGYGWVFQRTGRIEAAIVLHFALNAVHFIGFTYPALA 285 AH G Y +A VAG GYG+++ +T R+E AI+ H+ +N HF FTYP LA Sbjct: 227 AHFSAGTHYMLVAAVAGFGYGYIYYKTSRLEWAILCHWLVNVFHFFLFTYPMLA 280 >Q4UM62.1 Q4UM62_RICFE Putative uncharacterized protein Length = 283 Score = 137 bits (345), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 71/198 (35%), Positives = 111/198 (56%), Gaps = 3/198 (1%) Query: 88 ALHRWPGFINTLVVPPTHITADARPFMLYANFDKGVAGLLLLALLVPRCHARREWQDVLR 147 A H+ GF N L + ++ + PF +Y NFDK + L++ +L ++E D ++ Sbjct: 87 AFHKVLGFFNLLAIDKIQLSELSIPFSMYLNFDKVMPALIIFSLSDLYILEKQESSDTIK 146 Query: 148 LTLLPGLVTIALVMGLGWLIGLISPNLKWPGFTPPFLAINLLLTVVAEEAFFRGVLQHRL 207 TLL L+ IA++M L + G + K P P + N L +AEE FFRG LQ Sbjct: 147 YTLLSLLLCIAIIMVLSLISGYVLFEPKIPSILPIWAINNFFLVCMAEEVFFRGFLQRTF 206 Query: 208 QQAWQGLRGGAVLALILSAVLFGAAHLGGGLAYAALATVAGAGYGWVFQRTGRIEAAIVL 267 Q L +LA+I+++++FG AH GG+ Y AL+T+ G YG+ + +T +I ++++ Sbjct: 207 QNL---LPNRQILAVIIASLIFGVAHFQGGIIYIALSTICGFFYGYTYYKTNKILCSMIV 263 Query: 268 HFALNAVHFIGFTYPALA 285 HF LN H + FTYPAL Sbjct: 264 HFGLNLCHLLLFTYPALK 281 >B5WR12.1 B5WR12_9BURK Abortive infection protein Length = 284 Score = 134 bits (337), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 112/289 (38%), Positives = 149/289 (51%), Gaps = 24/289 (8%) Query: 4 FIVLMLAICAVWLPALRLTRLSVPPWLPLLLLAVTMGW--LDGQLKAVAVLGIVVLGTLA 61 +I + LA A W R WL L LL G GQL +A + I +LG A Sbjct: 6 WIAIFLAAPATWASTFR--------WLGLGLLVTGYGTALTTGQLGPLASVAIALLGVAA 57 Query: 62 WGSTHALHAWQRRSLLVLALLLALLMALHRWPGFINTLVVPPTHITADARPFMLYANFDK 121 + + + R + +L + LA+ +++H PGF N V+ P H T DA PF +Y NFDK Sbjct: 58 YAVSPDRQRYVRYAGHLLFVALAVALSMHWLPGFHNPRVIGPVHFTPDAVPFTMYLNFDK 117 Query: 122 GVAGL-LLLALLVPRC-HARREWQDVLRLTLLPG----LVTIALVMGLGWLIGLISPNLK 175 + G LLLAL R H R W LL G L+T+A M + +GL+ K Sbjct: 118 PLIGFWLLLALPWIRPPHGLRTW-------LLAGVAAWLITVAACMAVALSLGLVGWAPK 170 Query: 176 WPGFTPPFLAINLLLTVVAEEAFFRGVLQHRLQQAWQGLRGGAVLALILSAVLFGAAHLG 235 P + +LA NL L + EEA FRG LQ L + + + VLAL ++A LFG AH Sbjct: 171 RPADSLLWLANNLFLVTLTEEALFRGYLQGGLTRLFARWKRADVLALCVAAALFGLAHSA 230 Query: 236 GGLAYAALATVAGAGYGWVFQRTGRIEAAIVLHFALNAVHFIGFTYPAL 284 GG + L +VAG GYG + R G + AA++ HF LN VHF FTYP L Sbjct: 231 GGWQWIVLGSVAGIGYGLAY-RFGGLSAAVLAHFGLNVVHFFFFTYPML 278 >D5WFU7.1 D5WFU7_BURSC Abortive infection protein Length = 284 Score = 124 bits (311), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 108/288 (37%), Positives = 148/288 (51%), Gaps = 24/288 (8%) Query: 5 IVLMLAICAVWLPALRLTRLSVPPWLPLLLLAVTMG--WLDGQLKAVAVLGIVVLGTLAW 62 I + LA A W R WL + LL + G + GQL +A + I +LG A+ Sbjct: 7 IAIFLAAPATWASTFR--------WLGVGLLVIGYGTAFATGQLGPLASVAIALLGVAAY 58 Query: 63 GSTHALHAWQRRSLLVLALLLALLMALHRWPGFINTLVVPPTHITADARPFMLYANFDKG 122 + A + R + +L + LA+ ++LH PGF N V+ T DA PF +Y NFDK Sbjct: 59 AVSPAHRRYVRYAGHLLFVALAIALSLHWLPGFHNPRVMGRVQFTPDAVPFSMYLNFDKP 118 Query: 123 VAGL-LLLALLVPRC-HARREWQDVLRLTLLPG----LVTIALVMGLGWLIGLISPNLKW 176 + G LLLAL R HA R W LL G L T+A+ M + +G++ Sbjct: 119 LIGFWLLLALPWIRPPHALRTW-------LLAGIAGWLTTVAVCMAVALSLGVVGWAPNR 171 Query: 177 PGFTPPFLAINLLLTVVAEEAFFRGVLQHRLQQAWQGLRGGAVLALILSAVLFGAAHLGG 236 P + +L NL L + EEA FRG LQ L + + +LAL ++AVLFG AH G Sbjct: 172 PADSVLWLVNNLFLVTLTEEALFRGYLQGGLTRLFARWNRADLLALCVAAVLFGLAHSAG 231 Query: 237 GLAYAALATVAGAGYGWVFQRTGRIEAAIVLHFALNAVHFIGFTYPAL 284 G + L +VAG GYG + R G + AA++ HF LN +HF FTYP L Sbjct: 232 GWQWIVLGSVAGIGYGLAY-RFGGLCAAVLAHFGLNVIHFFFFTYPML 278 >Q884S3.1 Q884S3_PSESM CAAX amino terminal protease family protein Length = 266 Score = 122 bits (307), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 82/208 (39%), Positives = 117/208 (56%), Gaps = 2/208 (0%) Query: 78 VLALLLALLMALHRWPGFINTLVVPPTHITADARPFMLYANFDKGVAGLLLLALLVPRCH 137 VL ++ L +A H PGF N V+ T +ADA+ F +Y N DK + G L+ L P Sbjct: 60 VLFVVTGLALAFHLAPGFNNAQVIEATRFSADAQIFSMYLNLDKPLIGFWLI-LACPWIM 118 Query: 138 ARREWQDVLRLTLLPGLVTIALVMGLGWLIGLISPNLKWPGFTPPFLAINLLLTVVAEEA 197 + + L++ +L +VT A M ++ ++ KWP +L NLLL +AEE Sbjct: 119 PKVDIAHSLKVGVLALIVTSAFCMTAAVVLNVVGWTPKWPAQGLIWLFNNLLLVTLAEEL 178 Query: 198 FFRGVLQHRLQQAWQGLRGGAVLALILSAVLFGAAHLGGGLAYAALATVAGAGYGWVFQR 257 FFR LQ LQ+ ++ R L++ L+A +FG AH G G + LA++AG GYG F R Sbjct: 179 FFRAYLQGGLQRLFKDSRFATALSVTLAAGMFGLAHAGAGWEWMVLASMAGVGYGIAF-R 237 Query: 258 TGRIEAAIVLHFALNAVHFIGFTYPALA 285 +G + AA++ HF LN VHF FTYP LA Sbjct: 238 SGGLPAAVISHFGLNLVHFGLFTYPMLA 265 >E2M9Q4.1 E2M9Q4_PSESM CAAX amino terminal protease family protein Length = 266 Score = 122 bits (307), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 82/208 (39%), Positives = 117/208 (56%), Gaps = 2/208 (0%) Query: 78 VLALLLALLMALHRWPGFINTLVVPPTHITADARPFMLYANFDKGVAGLLLLALLVPRCH 137 VL ++ L +A H PGF N V+ T +ADA+ F +Y N DK + G L+ L P Sbjct: 60 VLFVVTGLALAFHLAPGFNNAQVIEATRFSADAQIFSMYLNLDKPLIGFWLI-LACPWIM 118 Query: 138 ARREWQDVLRLTLLPGLVTIALVMGLGWLIGLISPNLKWPGFTPPFLAINLLLTVVAEEA 197 + + L++ +L +VT A M ++ ++ KWP +L NLLL +AEE Sbjct: 119 PKVDIAHSLKVGVLALIVTSAFCMTAAVVLNVVGWTPKWPAQGMIWLFNNLLLVSLAEEL 178 Query: 198 FFRGVLQHRLQQAWQGLRGGAVLALILSAVLFGAAHLGGGLAYAALATVAGAGYGWVFQR 257 FFR LQ LQ+ ++ R L++ L+A +FG AH G G + LA++AG GYG F R Sbjct: 179 FFRAYLQGGLQRLFKDSRFATALSVTLAAGMFGLAHAGAGWEWMVLASMAGVGYGIAF-R 237 Query: 258 TGRIEAAIVLHFALNAVHFIGFTYPALA 285 +G + AA++ HF LN VHF FTYP LA Sbjct: 238 SGGLPAAVISHFGLNLVHFGLFTYPMLA 265 >B2JUG9.1 B2JUG9_BURP8 Abortive infection protein Length = 285 Score = 119 bits (299), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 82/207 (39%), Positives = 113/207 (54%), Gaps = 2/207 (0%) Query: 78 VLALLLALLMALHRWPGFINTLVVPPTHITADARPFMLYANFDKGVAGLLLLALLVPRCH 137 VL + LA+ ++ H PGF N V+ P IT DA PF +Y N DK + G LL L VP Sbjct: 75 VLFVALAVGLSTHWLPGFHNQRVIGPERITPDAVPFTMYLNLDKPLIGFWLL-LAVPWMR 133 Query: 138 ARREWQDVLRLTLLPGLVTIALVMGLGWLIGLISPNLKWPGFTPPFLAINLLLTVVAEEA 197 R E + L++ LL L T A + + L+G++ K P + +L NL L V EEA Sbjct: 134 GRYELRTSLKVGLLSLLATTAACLAVAQLLGVVGWAPKHPAHSGLWLLNNLFLVSVTEEA 193 Query: 198 FFRGVLQHRLQQAWQGLRGGAVLALILSAVLFGAAHLGGGLAYAALATVAGAGYGWVFQR 257 FRG LQ L + + +A +S ++F AH GG + LA +AGAGYG + R Sbjct: 194 LFRGYLQGGLARLLARRKHADGIAFCVSTIVFALAHAPGGWQWIVLAGIAGAGYGLAW-R 252 Query: 258 TGRIEAAIVLHFALNAVHFIGFTYPAL 284 G ++A+++ HF LN HF FTYP L Sbjct: 253 YGGLQASVLAHFGLNTAHFFFFTYPML 279