BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0030.0217.p (269 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value D8IVG9.1 D8IVG9_HERSS Transcription regulator, LysR family protein 533 e-150 B2T497.1 B2T497_BURPP Transcriptional regulator, LysR family 445 e-123 B5WPJ8.1 B5WPJ8_9BURK Transcriptional regulator, LysR family 443 e-122 D5W869.1 D5W869_BURSC Transcriptional regulator, LysR family 441 e-122 Q0B556.1 Q0B556_BURCM Transcriptional regulator, LysR family 379 e-103 B1F842.1 B1F842_9BURK Transcriptional regulator, LysR family 379 e-103 Q391E9.1 Q391E9_BURS3 Transcriptional regulator, LysR family 377 e-103 B1YYT8.1 B1YYT8_BURA4 Transcriptional regulator, LysR family 376 e-102 B1T928.1 B1T928_9BURK Transcriptional regulator, LysR family 374 e-102 B4EJC5.1 B4EJC5_BURCJ LysR family regulatory protein 374 e-101 >D8IVG9.1 D8IVG9_HERSS Transcription regulator, LysR family protein Length = 297 Score = 533 bits (1374), Expect = e-150, Method: Compositional matrix adjust. Identities = 267/269 (99%), Positives = 268/269 (99%) Query: 1 VTQTAVTLRLRKLEDFLGVTLIERTTRSIALTEIGQDFLPQARRLLAELAGALVEIRETG 60 VTQTAVTLRLRKLEDFLGVTLIERTTRSIALTEIG+DFLPQARRLLAELAGALVEIRETG Sbjct: 29 VTQTAVTLRLRKLEDFLGVTLIERTTRSIALTEIGRDFLPQARRLLAELAGALVEIRETG 88 Query: 61 IARRGDVSIACVPTVGVQYLPRILQAYSARYPHNRIKILDHASSAVAEAVLRREVEFGIH 120 IARRGDVSIACVPTVGVQYLPRILQAYSARYPHNRIKILDHASSAVAEAVLRREVEFGIH Sbjct: 89 IARRGDVSIACVPTVGVQYLPRILQAYSARYPHNRIKILDHASSAVAEAVLRREVEFGIH 148 Query: 121 IAGEHHPELISVALTEDRYVLICPKDHPLARRRRIAWRQLQSYPLIFAGEVSSNRALLDP 180 IAGEHHPELISVALTEDRYVLICPKDHPLARRRRIAWRQLQSYPLIFAGEVSSNRALLDP Sbjct: 149 IAGEHHPELISVALTEDRYVLICPKDHPLARRRRIAWRQLQSYPLIFAGEVSSNRALLDP 208 Query: 181 ALKANGFALRSFYEVQRSSTAVGLVAQGVGVAVVPKLAIQEGAYPTVRVIELVDPVVSRS 240 LKANGFALRSFYEVQRSSTAVGLVAQGVGVAVVPKLAIQEGAYPTVRVIELVDPVVSRS Sbjct: 209 TLKANGFALRSFYEVQRSSTAVGLVAQGVGVAVVPKLAIQEGAYPTVRVIELVDPVVSRS 268 Query: 241 LVLITRKAAHLSPAAQALYDMIREHEGDD 269 LVLITRKAAHLSPAAQALYDMIREHEGDD Sbjct: 269 LVLITRKAAHLSPAAQALYDMIREHEGDD 297 >B2T497.1 B2T497_BURPP Transcriptional regulator, LysR family Length = 298 Score = 445 bits (1144), Expect = e-123, Method: Compositional matrix adjust. Identities = 221/265 (83%), Positives = 239/265 (90%) Query: 1 VTQTAVTLRLRKLEDFLGVTLIERTTRSIALTEIGQDFLPQARRLLAELAGALVEIRETG 60 VTQTA+T RLRKLE +LGVTLIERTTRS+ LTEIGQ FLPQARRLL ELA ALVEIRETG Sbjct: 29 VTQTAITQRLRKLETYLGVTLIERTTRSMTLTEIGQGFLPQARRLLGELADALVEIRETG 88 Query: 61 IARRGDVSIACVPTVGVQYLPRILQAYSARYPHNRIKILDHASSAVAEAVLRREVEFGIH 120 +ARRGDVSIACVPTVGVQYLPRILQAYSARYPHNRI+ILDHASSAV AVLRREVEFGI+ Sbjct: 89 VARRGDVSIACVPTVGVQYLPRILQAYSARYPHNRIRILDHASSAVEAAVLRREVEFGIN 148 Query: 121 IAGEHHPELISVALTEDRYVLICPKDHPLARRRRIAWRQLQSYPLIFAGEVSSNRALLDP 180 IAGEHHP+L SV LTEDRYVLIC +DHPLA+RRRIAW+QLQSYPLIFAGEVS NRALLD Sbjct: 149 IAGEHHPDLASVPLTEDRYVLICHEDHPLAKRRRIAWQQLQSYPLIFAGEVSGNRALLDV 208 Query: 181 ALKANGFALRSFYEVQRSSTAVGLVAQGVGVAVVPKLAIQEGAYPTVRVIELVDPVVSRS 240 AL+ + ALRSFYEVQRSSTAVGLVAQGVG AVVP LA+Q+GAYPTVR++EL P VSR+ Sbjct: 209 ALEPSQLALRSFYEVQRSSTAVGLVAQGVGAAVVPALALQKGAYPTVRIVELTQPAVSRT 268 Query: 241 LVLITRKAAHLSPAAQALYDMIREH 265 LVL+ RK A LSPAAQALYDMI E Sbjct: 269 LVLVARKTAQLSPAAQALYDMILEQ 293 >B5WPJ8.1 B5WPJ8_9BURK Transcriptional regulator, LysR family Length = 299 Score = 443 bits (1139), Expect = e-122, Method: Compositional matrix adjust. Identities = 219/265 (82%), Positives = 243/265 (91%) Query: 1 VTQTAVTLRLRKLEDFLGVTLIERTTRSIALTEIGQDFLPQARRLLAELAGALVEIRETG 60 VTQTA+T RLRKLE +LGVTLIERTTRS+ALTEIG+ FLPQARRLL ELA ALVEIRETG Sbjct: 29 VTQTAITQRLRKLETYLGVTLIERTTRSMALTEIGRHFLPQARRLLGELADALVEIRETG 88 Query: 61 IARRGDVSIACVPTVGVQYLPRILQAYSARYPHNRIKILDHASSAVAEAVLRREVEFGIH 120 IARRGDVSIACVPTVGVQYLPRILQAYSARYPHNRIKILDHAS+AV EAVLRREVEFGI+ Sbjct: 89 IARRGDVSIACVPTVGVQYLPRILQAYSARYPHNRIKILDHASAAVEEAVLRREVEFGIN 148 Query: 121 IAGEHHPELISVALTEDRYVLICPKDHPLARRRRIAWRQLQSYPLIFAGEVSSNRALLDP 180 IA EHHP+L +V LT+DRYVLIC +DHPLA+RRRIAWRQLQ++PLIFAGEVS NRALLD Sbjct: 149 IAREHHPDLATVPLTKDRYVLICHEDHPLAKRRRIAWRQLQAFPLIFAGEVSGNRALLDV 208 Query: 181 ALKANGFALRSFYEVQRSSTAVGLVAQGVGVAVVPKLAIQEGAYPTVRVIELVDPVVSRS 240 AL+++G ALRSFYEVQRSSTA+GLVAQ VG AVVP LA+Q+GAYPTVR +EL+ P VSR+ Sbjct: 209 ALESSGLALRSFYEVQRSSTALGLVAQRVGAAVVPALALQKGAYPTVRTVELMQPAVSRT 268 Query: 241 LVLITRKAAHLSPAAQALYDMIREH 265 LVL+ RK+A LSPAAQALYDMIRE Sbjct: 269 LVLVARKSAQLSPAAQALYDMIREQ 293 >D5W869.1 D5W869_BURSC Transcriptional regulator, LysR family Length = 299 Score = 441 bits (1135), Expect = e-122, Method: Compositional matrix adjust. Identities = 219/265 (82%), Positives = 241/265 (90%) Query: 1 VTQTAVTLRLRKLEDFLGVTLIERTTRSIALTEIGQDFLPQARRLLAELAGALVEIRETG 60 VTQTA+T RLRKLE +LGVTLIERTTRS+ALT+IG++FLPQARRLL ELA ALVEIRETG Sbjct: 29 VTQTAITQRLRKLETYLGVTLIERTTRSMALTDIGRNFLPQARRLLGELADALVEIRETG 88 Query: 61 IARRGDVSIACVPTVGVQYLPRILQAYSARYPHNRIKILDHASSAVAEAVLRREVEFGIH 120 IARRGDVSIACVPTVGVQYLPRILQAYSA YPHNRIKILDHAS+AV EAVLRREVEFGI+ Sbjct: 89 IARRGDVSIACVPTVGVQYLPRILQAYSAHYPHNRIKILDHASAAVEEAVLRREVEFGIN 148 Query: 121 IAGEHHPELISVALTEDRYVLICPKDHPLARRRRIAWRQLQSYPLIFAGEVSSNRALLDP 180 IA EHHP+L SV LTEDRYVLIC +DHPLA+RRRIAWRQLQ++PLIFAGEVS NRALLD Sbjct: 149 IAREHHPDLASVPLTEDRYVLICHEDHPLAKRRRIAWRQLQAFPLIFAGEVSGNRALLDV 208 Query: 181 ALKANGFALRSFYEVQRSSTAVGLVAQGVGVAVVPKLAIQEGAYPTVRVIELVDPVVSRS 240 AL+++ ALRSFYEVQRSSTA+GLVAQ VGVAVVP LA+Q+GAYPTVR +EL P VSR+ Sbjct: 209 ALESSELALRSFYEVQRSSTALGLVAQRVGVAVVPALALQKGAYPTVRTVELTQPTVSRT 268 Query: 241 LVLITRKAAHLSPAAQALYDMIREH 265 LVL+ RK A LSPAAQALYDMIRE Sbjct: 269 LVLVARKTAQLSPAAQALYDMIREQ 293 >Q0B556.1 Q0B556_BURCM Transcriptional regulator, LysR family Length = 298 Score = 379 bits (973), Expect = e-103, Method: Compositional matrix adjust. Identities = 193/264 (73%), Positives = 224/264 (84%) Query: 1 VTQTAVTLRLRKLEDFLGVTLIERTTRSIALTEIGQDFLPQARRLLAELAGALVEIRETG 60 VTQTA+T RLRKLE FLGV L+ERTTR LTEIG+ FLPQARRLL EL+ AL EIRETG Sbjct: 29 VTQTAITQRLRKLESFLGVALVERTTRRTTLTEIGRRFLPQARRLLNELSDALTEIRETG 88 Query: 61 IARRGDVSIACVPTVGVQYLPRILQAYSARYPHNRIKILDHASSAVAEAVLRREVEFGIH 120 +++RGDV+IACVPTVGVQYLPRIL+A+S PH+R+KILDHAS++V +AVLRRE EFGI Sbjct: 89 LSQRGDVTIACVPTVGVQYLPRILRAFSGHRPHDRVKILDHASASVLQAVLRREAEFGIS 148 Query: 121 IAGEHHPELISVALTEDRYVLICPKDHPLARRRRIAWRQLQSYPLIFAGEVSSNRALLDP 180 IAG+ HPEL+SV LT D YVL+C DHPLA+RRRI W LQ +PLIFAGEVS NR LLD Sbjct: 149 IAGDQHPELVSVPLTHDPYVLVCRDDHPLAKRRRIRWAALQPHPLIFAGEVSGNRGLLDG 208 Query: 181 ALKANGFALRSFYEVQRSSTAVGLVAQGVGVAVVPKLAIQEGAYPTVRVIELVDPVVSRS 240 ALK +G +L SFYEVQRSSTA+GLVA+G+G AVVPKLA+Q+ AYP +R IELV+P VSR+ Sbjct: 209 ALKTSGVSLHSFYEVQRSSTALGLVAEGLGAAVVPKLAVQKNAYPMIRTIELVEPSVSRT 268 Query: 241 LVLITRKAAHLSPAAQALYDMIRE 264 LVL+ RKAA LSPAAQALYDMI E Sbjct: 269 LVLVKRKAAQLSPAAQALYDMIVE 292 >B1F842.1 B1F842_9BURK Transcriptional regulator, LysR family Length = 298 Score = 379 bits (973), Expect = e-103, Method: Compositional matrix adjust. Identities = 193/264 (73%), Positives = 224/264 (84%) Query: 1 VTQTAVTLRLRKLEDFLGVTLIERTTRSIALTEIGQDFLPQARRLLAELAGALVEIRETG 60 VTQTA+T RLRKLE FLGV L+ERTTR LTEIG+ FLPQARRLL EL+ AL EIRETG Sbjct: 29 VTQTAITQRLRKLESFLGVALVERTTRRTTLTEIGRRFLPQARRLLNELSDALTEIRETG 88 Query: 61 IARRGDVSIACVPTVGVQYLPRILQAYSARYPHNRIKILDHASSAVAEAVLRREVEFGIH 120 +++RGDV+IACVPTVGVQYLPRIL+A+S PH+R+KILDHAS++V +AVLRRE EFGI Sbjct: 89 LSQRGDVTIACVPTVGVQYLPRILRAFSGHRPHDRVKILDHASASVLQAVLRREAEFGIS 148 Query: 121 IAGEHHPELISVALTEDRYVLICPKDHPLARRRRIAWRQLQSYPLIFAGEVSSNRALLDP 180 IAG+ HPEL+SV LT D YVL+C DHPLA+RRRI W LQ +PLIFAGEVS NR LLD Sbjct: 149 IAGDQHPELVSVPLTHDPYVLVCRDDHPLAKRRRIRWAALQPHPLIFAGEVSGNRGLLDG 208 Query: 181 ALKANGFALRSFYEVQRSSTAVGLVAQGVGVAVVPKLAIQEGAYPTVRVIELVDPVVSRS 240 ALK +G +L SFYEVQRSSTA+GLVA+G+G AVVPKLA+Q+ AYP +R IELV+P VSR+ Sbjct: 209 ALKTSGVSLHSFYEVQRSSTALGLVAEGLGAAVVPKLAVQKNAYPMIRTIELVEPSVSRT 268 Query: 241 LVLITRKAAHLSPAAQALYDMIRE 264 LVL+ RKAA LSPAAQALYDMI E Sbjct: 269 LVLVKRKAAQLSPAAQALYDMIVE 292 >Q391E9.1 Q391E9_BURS3 Transcriptional regulator, LysR family Length = 296 Score = 377 bits (969), Expect = e-103, Method: Compositional matrix adjust. Identities = 192/265 (72%), Positives = 225/265 (84%) Query: 1 VTQTAVTLRLRKLEDFLGVTLIERTTRSIALTEIGQDFLPQARRLLAELAGALVEIRETG 60 VTQTA+T RLRKLE FLGV L+ERTTR LTEIG+ FLPQARRLL EL+ AL EIRETG Sbjct: 29 VTQTAITQRLRKLETFLGVALVERTTRRTTLTEIGRRFLPQARRLLNELSDALTEIRETG 88 Query: 61 IARRGDVSIACVPTVGVQYLPRILQAYSARYPHNRIKILDHASSAVAEAVLRREVEFGIH 120 +++RGDV+IACVPTVGVQYLPRIL+A+SA PH+R+KILDHAS++V +AVL RE EFGI Sbjct: 89 LSQRGDVTIACVPTVGVQYLPRILRAFSAHRPHDRVKILDHASASVLQAVLHREAEFGIG 148 Query: 121 IAGEHHPELISVALTEDRYVLICPKDHPLARRRRIAWRQLQSYPLIFAGEVSSNRALLDP 180 IAG+ HPEL++V LT D YVL+C DHPLA+RRRI W LQ +PLIFAGEVS NR LLD Sbjct: 149 IAGDQHPELVNVPLTSDPYVLVCRDDHPLAKRRRIRWAALQPHPLIFAGEVSGNRGLLDG 208 Query: 181 ALKANGFALRSFYEVQRSSTAVGLVAQGVGVAVVPKLAIQEGAYPTVRVIELVDPVVSRS 240 ALK +G +L SFYEVQRSSTA+GLVA+G+G AVVPKLAIQ+ AYP +R IELV+P VSR+ Sbjct: 209 ALKTSGVSLHSFYEVQRSSTALGLVAEGLGAAVVPKLAIQKNAYPMIRTIELVEPAVSRT 268 Query: 241 LVLITRKAAHLSPAAQALYDMIREH 265 LVL+TRK+A LSPAA+ALYDMI E Sbjct: 269 LVLVTRKSAQLSPAARALYDMIVEQ 293 >B1YYT8.1 B1YYT8_BURA4 Transcriptional regulator, LysR family Length = 298 Score = 376 bits (965), Expect = e-102, Method: Compositional matrix adjust. Identities = 192/264 (72%), Positives = 223/264 (84%) Query: 1 VTQTAVTLRLRKLEDFLGVTLIERTTRSIALTEIGQDFLPQARRLLAELAGALVEIRETG 60 VTQTA+T RLRKLE FLGV L+ERTTR LTEIG+ FLPQARR L EL+ AL EIRETG Sbjct: 29 VTQTAITQRLRKLESFLGVALVERTTRRTTLTEIGRRFLPQARRPLNELSDALTEIRETG 88 Query: 61 IARRGDVSIACVPTVGVQYLPRILQAYSARYPHNRIKILDHASSAVAEAVLRREVEFGIH 120 +++RGDV+IACVPTVGVQYLPRIL+A+S PH+R+KILDHAS++V +AVLRRE EFGI Sbjct: 89 LSQRGDVTIACVPTVGVQYLPRILRAFSGHRPHDRVKILDHASASVLQAVLRREAEFGIS 148 Query: 121 IAGEHHPELISVALTEDRYVLICPKDHPLARRRRIAWRQLQSYPLIFAGEVSSNRALLDP 180 IAG+ HPEL+SV LT D YVL+C DHPLA+RRRI W LQ +PLIFAGEVS NR LLD Sbjct: 149 IAGDQHPELVSVPLTHDPYVLVCRDDHPLAKRRRIRWAALQPHPLIFAGEVSGNRGLLDG 208 Query: 181 ALKANGFALRSFYEVQRSSTAVGLVAQGVGVAVVPKLAIQEGAYPTVRVIELVDPVVSRS 240 ALK +G +L SFYEVQRSSTA+G+VA+G+G AVVPKLAIQ+ AYP +R IELV+P VSR+ Sbjct: 209 ALKTSGVSLHSFYEVQRSSTALGIVAEGLGAAVVPKLAIQKNAYPMIRTIELVEPSVSRT 268 Query: 241 LVLITRKAAHLSPAAQALYDMIRE 264 LVL+ RKAA LSPAAQALYDMI E Sbjct: 269 LVLVKRKAAQLSPAAQALYDMIVE 292 >B1T928.1 B1T928_9BURK Transcriptional regulator, LysR family Length = 298 Score = 374 bits (960), Expect = e-102, Method: Compositional matrix adjust. Identities = 192/264 (72%), Positives = 225/264 (85%) Query: 1 VTQTAVTLRLRKLEDFLGVTLIERTTRSIALTEIGQDFLPQARRLLAELAGALVEIRETG 60 VTQTA+T RLRKLE FLGV L+ERTTR +TEIG+ FLPQARRLL EL+ AL EIRETG Sbjct: 29 VTQTAITQRLRKLESFLGVALVERTTRRTTVTEIGRRFLPQARRLLNELSDALTEIRETG 88 Query: 61 IARRGDVSIACVPTVGVQYLPRILQAYSARYPHNRIKILDHASSAVAEAVLRREVEFGIH 120 +++RGDV+IACVPTVGVQYLPRIL+A+S R PH+R+KILDHAS++V +AVLRRE EFGI Sbjct: 89 LSQRGDVTIACVPTVGVQYLPRILRAFSGRRPHDRVKILDHASASVLQAVLRREAEFGIS 148 Query: 121 IAGEHHPELISVALTEDRYVLICPKDHPLARRRRIAWRQLQSYPLIFAGEVSSNRALLDP 180 IAG+ HPEL+SV LT D YVL+C DHPLA+RRRI W LQ +PLIFAGEVS NR LLD Sbjct: 149 IAGDQHPELVSVPLTHDPYVLVCRDDHPLAKRRRIRWAALQPHPLIFAGEVSGNRGLLDG 208 Query: 181 ALKANGFALRSFYEVQRSSTAVGLVAQGVGVAVVPKLAIQEGAYPTVRVIELVDPVVSRS 240 ALK +G +L SFYEVQRSSTA+GLVA+G+G AVVP+LA+Q+ AYP +R IELV+P VSR+ Sbjct: 209 ALKTSGVSLHSFYEVQRSSTALGLVAEGLGAAVVPRLAVQKNAYPMIRTIELVEPSVSRT 268 Query: 241 LVLITRKAAHLSPAAQALYDMIRE 264 LVL+ RKAA LSPAAQALYDMI E Sbjct: 269 LVLVKRKAAQLSPAAQALYDMIVE 292 >B4EJC5.1 B4EJC5_BURCJ LysR family regulatory protein Length = 298 Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust. Identities = 190/264 (71%), Positives = 225/264 (85%) Query: 1 VTQTAVTLRLRKLEDFLGVTLIERTTRSIALTEIGQDFLPQARRLLAELAGALVEIRETG 60 VTQTA+T RLRKLE +LGV L+ERTTR LTEIG+ FLPQARRLL EL+ AL EIRETG Sbjct: 29 VTQTAITQRLRKLESYLGVALVERTTRRTTLTEIGRRFLPQARRLLNELSDALTEIRETG 88 Query: 61 IARRGDVSIACVPTVGVQYLPRILQAYSARYPHNRIKILDHASSAVAEAVLRREVEFGIH 120 +++RGDV+IACVPTVGVQYLPRIL+A+S PH+R+KILDHAS++V +AVLRRE EFGI Sbjct: 89 LSQRGDVTIACVPTVGVQYLPRILRAFSGHRPHDRVKILDHASASVLQAVLRREAEFGIS 148 Query: 121 IAGEHHPELISVALTEDRYVLICPKDHPLARRRRIAWRQLQSYPLIFAGEVSSNRALLDP 180 IAG+ HPEL+SV LT D YVL+C DHPLA+RRRI W LQ +PLIFAGEVS NR LL+ Sbjct: 149 IAGDQHPELVSVPLTHDPYVLVCRDDHPLAKRRRIRWAALQPHPLIFAGEVSGNRGLLEG 208 Query: 181 ALKANGFALRSFYEVQRSSTAVGLVAQGVGVAVVPKLAIQEGAYPTVRVIELVDPVVSRS 240 ALK +G +L SFYEVQRSSTA+GLVA+G+G AVVPKLAIQ+ AYP +R IELV+P VSR+ Sbjct: 209 ALKTSGVSLHSFYEVQRSSTALGLVAEGLGAAVVPKLAIQKNAYPMIRTIELVEPSVSRT 268 Query: 241 LVLITRKAAHLSPAAQALYDMIRE 264 LVL+TR++A LSPAA+ALYDMI E Sbjct: 269 LVLVTRRSAQLSPAARALYDMIVE 292