BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0030.0140.p (158 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value D8IWE0.1 D8IWE0_HERSS Ubiquinol oxidase subunit IV protein EC=1.... 318 1e-85 F1W4I2.1 F1W4I2_9BURK Cytochrome O ubiquinol oxidase subunit IV 167 6e-40 B3RD35.1 B3RD35_CUPTR TRANSMEMBRANE CYTOCHROME O UBIQUINOL OXIDA... 160 6e-38 A2SGL1.1 A2SGL1_METPP Cytochrome ubiquinol oxidase subunit IV 160 8e-38 Q0K2F5.1 Q0K2F5_CUPNH Bo3-type chinol oxidase, subunit IV EC=1.1... 159 9e-38 C7CLV2.1 C7CLV2_METED Cytochrome o ubiquinol oxidase, subunit IV... 157 4e-37 C5ARM1.1 C5ARM1_METEA Cytochrome o ubiquinol oxidase, subunit IV... 157 4e-37 A9VYE9.1 A9VYE9_METEP Cytochrome o ubiquinol oxidase subunit IV 157 4e-37 E6WSZ6.1 E6WSZ6_PSEUU Cytochrome o ubiquinol oxidase subunit IV 157 5e-37 B7KQT6.1 B7KQT6_METC4 Cytochrome o ubiquinol oxidase subunit IV 156 1e-36 >D8IWE0.1 D8IWE0_HERSS Ubiquinol oxidase subunit IV protein EC=1.10.3.- Length = 158 Score = 318 bits (816), Expect = 1e-85, Method: Compositional matrix adjust. Identities = 157/158 (99%), Positives = 157/158 (99%) Query: 1 MSRGHQEHPARPMGHHDDHGHGHGHGDHAAHGTMKDYVTGFVLAVILTAIPFWLVMNKSI 60 MSRGHQEHPARPMGHHDDH HGHGHGDHAAHGTMKDYVTGFVLAVILTAIPFWLVMNKSI Sbjct: 1 MSRGHQEHPARPMGHHDDHDHGHGHGDHAAHGTMKDYVTGFVLAVILTAIPFWLVMNKSI 60 Query: 61 SSSATMGIVLLALAAVQIVVHIKYFLHMNGKSEGGWNMLAMIFTIVIVVITLAGSLWVMY 120 SSSATMGIVLLALAAVQIVVHIKYFLHMNGKSEGGWNMLAMIFTIVIVVITLAGSLWVMY Sbjct: 61 SSSATMGIVLLALAAVQIVVHIKYFLHMNGKSEGGWNMLAMIFTIVIVVITLAGSLWVMY 120 Query: 121 HLNHNMMPTMSPENMPTETVPQSMQGMQGMQHSAPQSK 158 HLNHNMMPTMSPENMPTETVPQSMQGMQGMQHSAPQSK Sbjct: 121 HLNHNMMPTMSPENMPTETVPQSMQGMQGMQHSAPQSK 158 >F1W4I2.1 F1W4I2_9BURK Cytochrome O ubiquinol oxidase subunit IV Length = 180 Score = 167 bits (422), Expect = 6e-40, Method: Compositional matrix adjust. Identities = 88/156 (56%), Positives = 109/156 (69%), Gaps = 8/156 (5%) Query: 1 MSRGHQEHPARPMGHHDDHGHGHGHGDHAAHGTMKDYVTGFVLAVILTAIPFWLVMNKSI 60 MS H H A P G H H H H HA HG++K Y+TGF+LAVILTAIPFW+V+ K Sbjct: 1 MSTTHN-HVAAPAGGH--HEHDESHHTHADHGSVKSYLTGFILAVILTAIPFWVVLGKVF 57 Query: 61 SSSATMGIVLLALAAVQIVVHIKYFLHMNGKSEGGWNMLAMIFTIVIVVITLAGSLWVMY 120 S+T +V+L AAVQIVVH+ YFLHMN KSEGGW++LA+IFT ++VVI L+GS+WVMY Sbjct: 58 EKSSTTALVVLGFAAVQIVVHMVYFLHMNTKSEGGWSILALIFTTILVVIMLSGSIWVMY 117 Query: 121 HLNHNMMPTMSPENMPTETV-----PQSMQGMQGMQ 151 HLNHNMMP M P+ T P +M M+GM+ Sbjct: 118 HLNHNMMPGMMPDTTGDATTGSIKGPAAMPAMEGME 153 >B3RD35.1 B3RD35_CUPTR TRANSMEMBRANE CYTOCHROME O UBIQUINOL OXIDASE (SUBUNIT IV) OXIDOREDUCTASE PROTEIN EC=1.10.3.- Length = 135 Score = 160 bits (405), Expect = 6e-38, Method: Compositional matrix adjust. Identities = 81/128 (63%), Positives = 98/128 (76%), Gaps = 4/128 (3%) Query: 14 GHHDDHGHGHGHGDHAAHGTMKDYVTGFVLAVILTAIPFWLVMNKSISSSATMGIVLLAL 73 GH GH HGHG+ H ++ YVTGFVL+VILTAIPFWLVM + S+T +VLLAL Sbjct: 12 GHGPASGHDHGHGESEIHISLGGYVTGFVLSVILTAIPFWLVMGRVFEQSSTTAMVLLAL 71 Query: 74 AAVQIVVHIKYFLHMNGKSEGGWNMLAMIFTIVIVVITLAGSLWVMYHLNHNMMPTMSPE 133 AVQIVVH+ YFLH+N +SEGGWNMLA+IFT+V+VVITL G+LWVM+HLN NMMP M Sbjct: 72 GAVQIVVHMIYFLHLNARSEGGWNMLALIFTLVLVVITLTGTLWVMFHLNSNMMPGMH-- 129 Query: 134 NMPTETVP 141 T+T+P Sbjct: 130 --TTKTLP 135 >A2SGL1.1 A2SGL1_METPP Cytochrome ubiquinol oxidase subunit IV Length = 127 Score = 160 bits (404), Expect = 8e-38, Method: Compositional matrix adjust. Identities = 81/124 (65%), Positives = 96/124 (77%), Gaps = 7/124 (5%) Query: 15 HHDDHGHGHGHGDHAAHGTMKDYVTGFVLAVILTAIPFWLVMNKSISSSATMGIVLLALA 74 HHD H GD A HG++K YV GF+L+++LTAIPFWLVM K I+SS +V+L A Sbjct: 9 HHDGH-----EGDEAGHGSLKGYVIGFMLSLVLTAIPFWLVMGKVIASSGLTALVILGFA 63 Query: 75 AVQIVVHIKYFLHMNGKSEGGWNMLAMIFTIVIVVITLAGSLWVMYHLNHNMMPTMSPE- 133 AVQIVVH+ YFLHMN KSEGGW +LA+IFT+V+VVITL+GSLWVMYHLNHNMMP E Sbjct: 64 AVQIVVHMVYFLHMNAKSEGGWTILALIFTLVLVVITLSGSLWVMYHLNHNMMPASMHEV 123 Query: 134 -NMP 136 NMP Sbjct: 124 RNMP 127 >Q0K2F5.1 Q0K2F5_CUPNH Bo3-type chinol oxidase, subunit IV EC=1.10.3.- Length = 141 Score = 159 bits (403), Expect = 9e-38, Method: Compositional matrix adjust. Identities = 78/119 (65%), Positives = 92/119 (77%), Gaps = 1/119 (0%) Query: 17 DDHGHGHGHG-DHAAHGTMKDYVTGFVLAVILTAIPFWLVMNKSISSSATMGIVLLALAA 75 D HGH HGH D H T+ Y+TGFVL+V LTAIPFWLVM K S+T IV+L + A Sbjct: 9 DSHGHSHGHDEDVGPHATLGGYLTGFVLSVFLTAIPFWLVMGKVFDKSSTTAIVILLIGA 68 Query: 76 VQIVVHIKYFLHMNGKSEGGWNMLAMIFTIVIVVITLAGSLWVMYHLNHNMMPTMSPEN 134 VQIVVH+ YFLHMN +SEGGWNML+++FT+V+VVITL GSLWVM+HLN NMMPTM E Sbjct: 69 VQIVVHMIYFLHMNARSEGGWNMLSLMFTLVLVVITLTGSLWVMFHLNSNMMPTMQHER 127 >C7CLV2.1 C7CLV2_METED Cytochrome o ubiquinol oxidase, subunit IV EC=1.10.3.- Length = 126 Score = 157 bits (398), Expect = 4e-37, Method: Compositional matrix adjust. Identities = 80/121 (66%), Positives = 92/121 (76%), Gaps = 4/121 (3%) Query: 15 HHDDHGHGHGHGDHAAHGTMKDYVTGFVLAVILTAIPFWLVMNKSISSSATMGIVLLALA 74 H DDHGHG D HG+ KDYVTGFVL+VILTAIPFWLVM + G+V+L L Sbjct: 6 HADDHGHGQ---DAHGHGSFKDYVTGFVLSVILTAIPFWLVMGDVLGDKLITGVVILGLG 62 Query: 75 AVQIVVHIKYFLHMNGKSEGGWNMLAMIFTIVIVVITLAGSLWVMYHLNHNMMPTMSPEN 134 AVQIVVH+ YFLHMN KSEGGW +A+IFTI +VVITL GS+WVM+HLN NMMP +SPE Sbjct: 63 AVQIVVHMIYFLHMNTKSEGGWTFMALIFTITLVVITLCGSIWVMHHLNTNMMP-ISPEE 121 Query: 135 M 135 M Sbjct: 122 M 122 >C5ARM1.1 C5ARM1_METEA Cytochrome o ubiquinol oxidase, subunit IV EC=1.10.3.- Length = 126 Score = 157 bits (398), Expect = 4e-37, Method: Compositional matrix adjust. Identities = 80/121 (66%), Positives = 92/121 (76%), Gaps = 4/121 (3%) Query: 15 HHDDHGHGHGHGDHAAHGTMKDYVTGFVLAVILTAIPFWLVMNKSISSSATMGIVLLALA 74 H DDHGHG D HG+ KDYVTGFVL+VILTAIPFWLVM + G+V+L L Sbjct: 6 HADDHGHGQ---DAHGHGSFKDYVTGFVLSVILTAIPFWLVMGDVLGDKLITGVVILGLG 62 Query: 75 AVQIVVHIKYFLHMNGKSEGGWNMLAMIFTIVIVVITLAGSLWVMYHLNHNMMPTMSPEN 134 AVQIVVH+ YFLHMN KSEGGW +A+IFTI +VVITL GS+WVM+HLN NMMP +SPE Sbjct: 63 AVQIVVHMIYFLHMNTKSEGGWTFMALIFTITLVVITLCGSIWVMHHLNTNMMP-ISPEE 121 Query: 135 M 135 M Sbjct: 122 M 122 >A9VYE9.1 A9VYE9_METEP Cytochrome o ubiquinol oxidase subunit IV Length = 126 Score = 157 bits (398), Expect = 4e-37, Method: Compositional matrix adjust. Identities = 80/121 (66%), Positives = 92/121 (76%), Gaps = 4/121 (3%) Query: 15 HHDDHGHGHGHGDHAAHGTMKDYVTGFVLAVILTAIPFWLVMNKSISSSATMGIVLLALA 74 H DDHGHG D HG+ KDYVTGFVL+VILTAIPFWLVM + G+V+L L Sbjct: 6 HADDHGHGQ---DAHGHGSFKDYVTGFVLSVILTAIPFWLVMGDVLGDKLITGVVILGLG 62 Query: 75 AVQIVVHIKYFLHMNGKSEGGWNMLAMIFTIVIVVITLAGSLWVMYHLNHNMMPTMSPEN 134 AVQIVVH+ YFLHMN KSEGGW +A+IFTI +VVITL GS+WVM+HLN NMMP +SPE Sbjct: 63 AVQIVVHMIYFLHMNTKSEGGWTFMALIFTITLVVITLCGSIWVMHHLNTNMMP-ISPEE 121 Query: 135 M 135 M Sbjct: 122 M 122 >E6WSZ6.1 E6WSZ6_PSEUU Cytochrome o ubiquinol oxidase subunit IV Length = 139 Score = 157 bits (397), Expect = 5e-37, Method: Compositional matrix adjust. Identities = 82/135 (60%), Positives = 99/135 (73%), Gaps = 2/135 (1%) Query: 1 MSRGHQEHPARPMGH-HDDHGHGHGHGDHAAHGTMKDYVTGFVLAVILTAIPFWLVMNKS 59 MS+ H H A GH HD+HG H D AHG+M+DYV GFVL+VILTAIPFWLVM Sbjct: 1 MSQPHDTH-AMAHGHSHDEHGGEHHAHDEGAHGSMRDYVIGFVLSVILTAIPFWLVMGNV 59 Query: 60 ISSSATMGIVLLALAAVQIVVHIKYFLHMNGKSEGGWNMLAMIFTIVIVVITLAGSLWVM 119 I T +V+L A VQIVV + YFLHMN +SEGGWNMLA++FT+V+VVI LAGSLWVM Sbjct: 60 IQDQGTTALVILGFAVVQIVVQMVYFLHMNARSEGGWNMLALMFTVVLVVIVLAGSLWVM 119 Query: 120 YHLNHNMMPTMSPEN 134 +H+N NMMP +S + Sbjct: 120 HHMNANMMPHISTHD 134 >B7KQT6.1 B7KQT6_METC4 Cytochrome o ubiquinol oxidase subunit IV Length = 126 Score = 156 bits (394), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 79/121 (65%), Positives = 92/121 (76%), Gaps = 4/121 (3%) Query: 15 HHDDHGHGHGHGDHAAHGTMKDYVTGFVLAVILTAIPFWLVMNKSISSSATMGIVLLALA 74 H DDHGHG D HG+ KDYVTGFVL+VILTAIPFWLVM + G+V+L L Sbjct: 6 HADDHGHGQ---DAHGHGSFKDYVTGFVLSVILTAIPFWLVMGDVLGDKLITGVVILGLG 62 Query: 75 AVQIVVHIKYFLHMNGKSEGGWNMLAMIFTIVIVVITLAGSLWVMYHLNHNMMPTMSPEN 134 AVQIVVH+ YFLHMN KSEGGW +A+IFTI +VVITL GS+WVM+HLN NMMP +SPE Sbjct: 63 AVQIVVHMIYFLHMNTKSEGGWTFMALIFTITLVVITLCGSIWVMHHLNTNMMP-ISPEE 121 Query: 135 M 135 + Sbjct: 122 I 122