BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0030.0013.p (225 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value D8IWP7.1 D8IWP7_HERSS Cyclic nucleotide-binding protein 461 e-128 C7RTU8.1 C7RTU8_ACCPU Transcriptional regulator, Crp/Fnr family 273 1e-71 Q0KEY6.1 Q0KEY6_CUPNH Transcriptional regulator, CRP-family 265 5e-69 Q476P2.1 Q476P2_CUPPJ Cyclic nucleotide-binding protein 263 2e-68 B2AGJ7.1 B2AGJ7_CUPTR Putative transcriptional regulator, crp fa... 262 3e-68 Q47JH4.1 Q47JH4_DECAR Cyclic nucleotide-binding protein 256 2e-66 Q1LRX7.1 Q1LRX7_RALME Transcriptional regulator, CRP-family 255 3e-66 A9IGU8.1 A9IGU8_BORPD Cyclic nucleotide-binding protein 251 4e-65 E3HP12.1 E3HP12_ACHXA Cyclic nucleotide-binding domain protein 6 249 1e-64 E5UGE8.1 E5UGE8_ALCXX Cyclic nucleotide-binding protein 249 3e-64 >D8IWP7.1 D8IWP7_HERSS Cyclic nucleotide-binding protein Length = 225 Score = 461 bits (1185), Expect = e-128, Method: Compositional matrix adjust. Identities = 225/225 (100%), Positives = 225/225 (100%) Query: 1 METSIRRMLAKSIWAQALTEEQLARVETEVVSRKIPAGGYVCRKGDAVTHWIGVHEGLLK 60 METSIRRMLAKSIWAQALTEEQLARVETEVVSRKIPAGGYVCRKGDAVTHWIGVHEGLLK Sbjct: 1 METSIRRMLAKSIWAQALTEEQLARVETEVVSRKIPAGGYVCRKGDAVTHWIGVHEGLLK 60 Query: 61 MSSVSPEGKTVSFAGMANGGWLGEGSLLKDEPRKYDVVALRESELLYMPKATYIWLLDNS 120 MSSVSPEGKTVSFAGMANGGWLGEGSLLKDEPRKYDVVALRESELLYMPKATYIWLLDNS Sbjct: 61 MSSVSPEGKTVSFAGMANGGWLGEGSLLKDEPRKYDVVALRESELLYMPKATYIWLLDNS 120 Query: 121 IPFNRFLVTQLNERLALFISLVEYDRMLEPDARVARCLAALFNPYLNPGIGLNLQISQEE 180 IPFNRFLVTQLNERLALFISLVEYDRMLEPDARVARCLAALFNPYLNPGIGLNLQISQEE Sbjct: 121 IPFNRFLVTQLNERLALFISLVEYDRMLEPDARVARCLAALFNPYLNPGIGLNLQISQEE 180 Query: 181 VGNLSGTSRQRANQALQVLEKAGLLKVDYGSITINDLEGLRQFPG 225 VGNLSGTSRQRANQALQVLEKAGLLKVDYGSITINDLEGLRQFPG Sbjct: 181 VGNLSGTSRQRANQALQVLEKAGLLKVDYGSITINDLEGLRQFPG 225 >C7RTU8.1 C7RTU8_ACCPU Transcriptional regulator, Crp/Fnr family Length = 230 Score = 273 bits (698), Expect = 1e-71, Method: Compositional matrix adjust. Identities = 126/220 (57%), Positives = 170/220 (77%) Query: 4 SIRRMLAKSIWAQALTEEQLARVETEVVSRKIPAGGYVCRKGDAVTHWIGVHEGLLKMSS 63 S+ ML S WA+ L+ ++L +V + R IPAGGYVC KG+AV +W+G+ +GL KM+S Sbjct: 9 SLDDMLCASCWARQLSADELDQVRRDTFVRTIPAGGYVCMKGEAVDYWLGIVDGLAKMAS 68 Query: 64 VSPEGKTVSFAGMANGGWLGEGSLLKDEPRKYDVVALRESELLYMPKATYIWLLDNSIPF 123 GK SF G+++G W GEGSL+KDEPR+YDV+ALRES + YM ++ + LLD+SIPF Sbjct: 69 NWRTGKATSFVGLSSGSWFGEGSLMKDEPRRYDVIALRESRIAYMKRSRFQHLLDHSIPF 128 Query: 124 NRFLVTQLNERLALFISLVEYDRMLEPDARVARCLAALFNPYLNPGIGLNLQISQEEVGN 183 NRFL+ QLNERL+ FI ++E++R+L+ D+R+ARCLA++FNP L PG L L+ISQEE+G Sbjct: 129 NRFLLLQLNERLSQFIGMIEHERLLDSDSRLARCLASMFNPLLYPGSSLELRISQEEIGL 188 Query: 184 LSGTSRQRANQALQVLEKAGLLKVDYGSITINDLEGLRQF 223 L+G SRQR NQAL LE+AGLL++DYG++TI DL GLR F Sbjct: 189 LAGISRQRVNQALHKLEEAGLLRIDYGTLTILDLAGLRSF 228 >Q0KEY6.1 Q0KEY6_CUPNH Transcriptional regulator, CRP-family Length = 222 Score = 265 bits (676), Expect = 5e-69, Method: Compositional matrix adjust. Identities = 120/213 (56%), Positives = 163/213 (76%) Query: 11 KSIWAQALTEEQLARVETEVVSRKIPAGGYVCRKGDAVTHWIGVHEGLLKMSSVSPEGKT 70 + +WA L+ EQ RV + + G YVC KGD HW+GV EG++K+++VSP GK+ Sbjct: 8 RCVWAADLSPEQRERVRRAMFVHEYTQGDYVCHKGDMAEHWMGVLEGIVKITTVSPSGKS 67 Query: 71 VSFAGMANGGWLGEGSLLKDEPRKYDVVALRESELLYMPKATYIWLLDNSIPFNRFLVTQ 130 V+F G+ GGW GEG++LK E RKYDV+ALR S + ++P+ T++WLLD S+PF RFL+TQ Sbjct: 68 VTFTGVPTGGWFGEGAVLKSEIRKYDVMALRRSTIAFLPRDTFLWLLDTSLPFTRFLLTQ 127 Query: 131 LNERLALFISLVEYDRMLEPDARVARCLAALFNPYLNPGIGLNLQISQEEVGNLSGTSRQ 190 NERL FI+ VEY+R+L+ D+RVAR +++LFN +L PGIG L+ISQEE+G L+G SRQ Sbjct: 128 FNERLGQFIAAVEYERLLDIDSRVARAVSSLFNEHLYPGIGKTLEISQEEIGLLAGISRQ 187 Query: 191 RANQALQVLEKAGLLKVDYGSITINDLEGLRQF 223 RANQAL+VLE+ GL++VDYG I + DLEGLRQ+ Sbjct: 188 RANQALKVLEQQGLVRVDYGVIEVLDLEGLRQY 220 >Q476P2.1 Q476P2_CUPPJ Cyclic nucleotide-binding protein Length = 222 Score = 263 bits (671), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 120/216 (55%), Positives = 164/216 (75%) Query: 8 MLAKSIWAQALTEEQLARVETEVVSRKIPAGGYVCRKGDAVTHWIGVHEGLLKMSSVSPE 67 + + +WA L+ EQ RV + R+ G YVC KG+ HW+GV EG++K+++VSP Sbjct: 5 FVDRCVWAADLSAEQRDRVRRAMFVREYTQGDYVCHKGEIAEHWLGVLEGIVKITTVSPS 64 Query: 68 GKTVSFAGMANGGWLGEGSLLKDEPRKYDVVALRESELLYMPKATYIWLLDNSIPFNRFL 127 GK+V+F G+ GGW GEG++LK E RKYDV+ALR S + ++P+ T+ WLLD S+PF RFL Sbjct: 65 GKSVTFTGVPTGGWFGEGAVLKSEIRKYDVMALRRSTIAFLPRDTFQWLLDTSLPFTRFL 124 Query: 128 VTQLNERLALFISLVEYDRMLEPDARVARCLAALFNPYLNPGIGLNLQISQEEVGNLSGT 187 +TQ NERL FI+ VEY+R+L+ D+RVAR +++LFN +L PGIG L+ISQEE+G L+G Sbjct: 125 LTQFNERLGQFIAAVEYERLLDIDSRVARAVSSLFNEHLYPGIGNTLEISQEEIGLLAGI 184 Query: 188 SRQRANQALQVLEKAGLLKVDYGSITINDLEGLRQF 223 SRQRANQAL+VLE+ GL++VDYG I + DLEGLRQ+ Sbjct: 185 SRQRANQALKVLEQQGLVRVDYGVIEVLDLEGLRQY 220 >B2AGJ7.1 B2AGJ7_CUPTR Putative transcriptional regulator, crp family Length = 222 Score = 262 bits (669), Expect = 3e-68, Method: Compositional matrix adjust. Identities = 119/216 (55%), Positives = 163/216 (75%) Query: 8 MLAKSIWAQALTEEQLARVETEVVSRKIPAGGYVCRKGDAVTHWIGVHEGLLKMSSVSPE 67 + + +WA L+ EQ RV + + G YVC KGD HW+GV EG++K+++VSP Sbjct: 5 FVDRCVWAADLSPEQRERVRRAMFVHEYSQGDYVCHKGDKAEHWLGVLEGIVKITTVSPS 64 Query: 68 GKTVSFAGMANGGWLGEGSLLKDEPRKYDVVALRESELLYMPKATYIWLLDNSIPFNRFL 127 GK+V+F G+ GGW GEG++LK E RKYDV+ALR S + ++P+ T+ WLLD S+PF RFL Sbjct: 65 GKSVTFTGVPTGGWFGEGAVLKSEIRKYDVMALRRSTIAFLPRDTFQWLLDTSLPFTRFL 124 Query: 128 VTQLNERLALFISLVEYDRMLEPDARVARCLAALFNPYLNPGIGLNLQISQEEVGNLSGT 187 +TQ NERL FI+ VEY+R+L+ D+RVAR +++LFN +L PGIG L+ISQEE+G L+G Sbjct: 125 LTQFNERLGQFIAAVEYERLLDIDSRVARAVSSLFNEHLYPGIGKTLEISQEEIGLLAGI 184 Query: 188 SRQRANQALQVLEKAGLLKVDYGSITINDLEGLRQF 223 SRQRANQAL+VLE+ GL++VDYG I + DL+GLRQ+ Sbjct: 185 SRQRANQALKVLEQQGLVRVDYGVIEVLDLDGLRQY 220 >Q47JH4.1 Q47JH4_DECAR Cyclic nucleotide-binding protein Length = 224 Score = 256 bits (654), Expect = 2e-66, Method: Compositional matrix adjust. Identities = 120/216 (55%), Positives = 159/216 (73%) Query: 8 MLAKSIWAQALTEEQLARVETEVVSRKIPAGGYVCRKGDAVTHWIGVHEGLLKMSSVSPE 67 +L S+W Q+LT E++ R + R G ++C KG+ V +W+G+ +GL KM+S Sbjct: 7 LLRTSLWGQSLTAEEMDRALAGTIERSFAPGAFICMKGEPVDYWMGIIDGLGKMASHWTT 66 Query: 68 GKTVSFAGMANGGWLGEGSLLKDEPRKYDVVALRESELLYMPKATYIWLLDNSIPFNRFL 127 GKT S G++ GGW GEGSL+K EPR+YDV+ALRE+ + +M + T+ WLLD+SIPFNR++ Sbjct: 67 GKTTSLTGISVGGWFGEGSLMKKEPRRYDVMALRETRVAFMSRNTFNWLLDHSIPFNRYM 126 Query: 128 VTQLNERLALFISLVEYDRMLEPDARVARCLAALFNPYLNPGIGLNLQISQEEVGNLSGT 187 + QLNERL FI ++E +RML+ DAR+AR LAALFNP L PG LQISQEE+G L+G Sbjct: 127 IAQLNERLGQFIGMIENERMLDTDARIARGLAALFNPVLYPGTNRLLQISQEELGYLAGV 186 Query: 188 SRQRANQALQVLEKAGLLKVDYGSITINDLEGLRQF 223 SRQRANQAL+VLE AGL++ +YG I I DLEGLR F Sbjct: 187 SRQRANQALKVLEDAGLVRSEYGGIHIVDLEGLRSF 222 >Q1LRX7.1 Q1LRX7_RALME Transcriptional regulator, CRP-family Length = 259 Score = 255 bits (652), Expect = 3e-66, Method: Compositional matrix adjust. Identities = 121/223 (54%), Positives = 163/223 (73%) Query: 1 METSIRRMLAKSIWAQALTEEQLARVETEVVSRKIPAGGYVCRKGDAVTHWIGVHEGLLK 60 M + + + WA L+ EQ ARV+ R+ G YVC KG+ HW+GV EG++K Sbjct: 35 MTATNNDFIDRCAWATNLSPEQRARVKRVTTVREYTQGEYVCHKGEMAEHWLGVVEGVVK 94 Query: 61 MSSVSPEGKTVSFAGMANGGWLGEGSLLKDEPRKYDVVALRESELLYMPKATYIWLLDNS 120 +++VSP GK+V+F G+ GGW GEG++LK E RKYDV+ALR S + ++P T+ WLLD S Sbjct: 95 ITTVSPSGKSVTFTGVPTGGWFGEGAVLKHEIRKYDVMALRRSRIAFIPIETFQWLLDTS 154 Query: 121 IPFNRFLVTQLNERLALFISLVEYDRMLEPDARVARCLAALFNPYLNPGIGLNLQISQEE 180 +PF RFL+ QLN+RL FI+ VEY+R+L+ D+RVAR +++LFN L PGIG L+ISQEE Sbjct: 155 LPFTRFLLMQLNDRLGQFIAAVEYERLLDIDSRVARAVSSLFNESLYPGIGTTLEISQEE 214 Query: 181 VGNLSGTSRQRANQALQVLEKAGLLKVDYGSITINDLEGLRQF 223 +G L+G SRQRANQAL+VLE+ GL++VDYG I DLEGLRQ+ Sbjct: 215 IGLLAGISRQRANQALKVLEQQGLVRVDYGVIEALDLEGLRQY 257 >A9IGU8.1 A9IGU8_BORPD Cyclic nucleotide-binding protein Length = 229 Score = 251 bits (642), Expect = 4e-65, Method: Compositional matrix adjust. Identities = 123/212 (58%), Positives = 159/212 (75%) Query: 12 SIWAQALTEEQLARVETEVVSRKIPAGGYVCRKGDAVTHWIGVHEGLLKMSSVSPEGKTV 71 + W + LT+EQ ARVE ++ + AG + RKG+ WIGV GL+K+S + EGK Sbjct: 11 AAWFRVLTDEQQARVERDIAVQPAQAGTIIERKGELAQAWIGVLAGLVKVSVGNAEGKVA 70 Query: 72 SFAGMANGGWLGEGSLLKDEPRKYDVVALRESELLYMPKATYIWLLDNSIPFNRFLVTQL 131 S G+ GGW+GEGSLLK E RKYDVVALR+S + +P AT+ WLLD SIPFNR+L+ QL Sbjct: 71 SLTGVPAGGWIGEGSLLKREVRKYDVVALRDSMVARLPAATFDWLLDTSIPFNRYLLHQL 130 Query: 132 NERLALFISLVEYDRMLEPDARVARCLAALFNPYLNPGIGLNLQISQEEVGNLSGTSRQR 191 NER+A FI EYDR+L+PDARVARCLA LFNP L PG+G+ L I+QEEVG L+ SRQR Sbjct: 131 NERVAQFIGKAEYDRLLDPDARVARCLAELFNPLLYPGMGMRLAITQEEVGYLARVSRQR 190 Query: 192 ANQALQVLEKAGLLKVDYGSITINDLEGLRQF 223 ANQAL LE+AGLL+V+YG++ + DL+GL+++ Sbjct: 191 ANQALGKLEEAGLLRVEYGAVRVLDLDGLKRY 222 >E3HP12.1 E3HP12_ACHXA Cyclic nucleotide-binding domain protein 6 Length = 234 Score = 249 bits (637), Expect = 1e-64, Method: Compositional matrix adjust. Identities = 120/212 (56%), Positives = 160/212 (75%) Query: 12 SIWAQALTEEQLARVETEVVSRKIPAGGYVCRKGDAVTHWIGVHEGLLKMSSVSPEGKTV 71 + W + L+ +Q RVE ++ +++ AG + RKG+ WIGV GL+K+S + EGK Sbjct: 11 AAWFRVLSRDQQERVERDLTVQQVVAGSIIERKGELAQAWIGVLAGLVKVSVGNAEGKVA 70 Query: 72 SFAGMANGGWLGEGSLLKDEPRKYDVVALRESELLYMPKATYIWLLDNSIPFNRFLVTQL 131 S G+ GGW+GEGSLLK E RKYD+VALR+S + +P AT+ WLLD+SIPFNR+L+ QL Sbjct: 71 SLTGVPAGGWIGEGSLLKREIRKYDIVALRDSVVARLPAATFDWLLDSSIPFNRYLLHQL 130 Query: 132 NERLALFISLVEYDRMLEPDARVARCLAALFNPYLNPGIGLNLQISQEEVGNLSGTSRQR 191 NER+A FI EYDR+L+PDARVARCLA LFNP L PG+G+ L I+QEEVG L+ SRQR Sbjct: 131 NERVAQFIGKAEYDRLLDPDARVARCLAELFNPLLYPGMGMRLAITQEEVGYLARVSRQR 190 Query: 192 ANQALQVLEKAGLLKVDYGSITINDLEGLRQF 223 ANQAL+ LE+AGLL V+YG++ + DL+GL+Q+ Sbjct: 191 ANQALRKLEEAGLLNVEYGAVRVLDLDGLKQY 222 >E5UGE8.1 E5UGE8_ALCXX Cyclic nucleotide-binding protein Length = 235 Score = 249 bits (635), Expect = 3e-64, Method: Compositional matrix adjust. Identities = 121/212 (57%), Positives = 158/212 (74%) Query: 12 SIWAQALTEEQLARVETEVVSRKIPAGGYVCRKGDAVTHWIGVHEGLLKMSSVSPEGKTV 71 + W + L EQ ARVE ++ +++ AG + RKG+ WIGV GL+K+S + EGK Sbjct: 11 AAWFRVLDAEQQARVERDLSVQQVAAGSIIERKGELAQAWIGVLAGLVKVSVGNAEGKVA 70 Query: 72 SFAGMANGGWLGEGSLLKDEPRKYDVVALRESELLYMPKATYIWLLDNSIPFNRFLVTQL 131 S G+ GGW+GEGSLLK E RKYD+VALR+S + +P AT+ WLLD SIPFNR+L+ QL Sbjct: 71 SLTGVPAGGWIGEGSLLKREVRKYDIVALRDSVVARLPAATFDWLLDTSIPFNRYLLHQL 130 Query: 132 NERLALFISLVEYDRMLEPDARVARCLAALFNPYLNPGIGLNLQISQEEVGNLSGTSRQR 191 NER+A FI EYDR+L+PDARVARCLA LFNP L PG+G+ L I+QEEVG L+ SRQR Sbjct: 131 NERVAQFIGKAEYDRLLDPDARVARCLAELFNPLLYPGMGMRLTITQEEVGYLARVSRQR 190 Query: 192 ANQALQVLEKAGLLKVDYGSITINDLEGLRQF 223 ANQAL+ LE+AGLL V+YG++ + DL+GL+ + Sbjct: 191 ANQALRKLEEAGLLNVEYGAVRVLDLDGLKLY 222