BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0030.0006.p (754 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value D8IXH2.1 D8IXH2_HERSS P pilus assembly protein, porin PapC protein 1494 0.0 B7J3A9.1 B7J3A9_ACIF2 Outer membrane usher protein, putative 486 e-135 B5EJ71.1 B5EJ71_ACIF5 Fimbrial biogenesis outer membrane usher p... 486 e-135 B1T5X2.1 B1T5X2_9BURK Fimbrial biogenesis outer membrane usher p... 461 e-127 Q2T078.1 Q2T078_BURTA Fimbrial usher protein 400 e-109 D8P6G5.1 D8P6G5_RALSO Putative fimbrial biogenesis outer membran... 387 e-105 B5SBP9.1 B5SBP9_RALSO Outer membrane usher protein 387 e-105 A3RNN6.1 A3RNN6_RALSO SefC 387 e-105 Q8XPY8.1 Q8XPY8_RALSO Probable outer membrane usher signal pepti... 386 e-105 B5RYD6.1 B5RYD6_RALSO Outer membrane usher protein 385 e-104 >D8IXH2.1 D8IXH2_HERSS P pilus assembly protein, porin PapC protein Length = 764 Score = 1494 bits (3868), Expect = 0.0, Method: Compositional matrix adjust. Identities = 749/754 (99%), Positives = 751/754 (99%) Query: 1 LILLLSCLPGWAAEPGDELLLLEVAINGRDTNLVAQFTRRQRELYASAAELRSLNLRVDG 60 LILLLSCLPGWAAEPGDELLLLEVAINGRDTNLVAQFTRRQRELYASAAELRSLNLRVDG Sbjct: 11 LILLLSCLPGWAAEPGDELLLLEVAINGRDTNLVAQFTRRQRELYASAAELRSLNLRVDG 70 Query: 61 GDDELIAIRALASRIQLDEAAAKVNLEIAPRFMNITDIEANSAAARVPLSPAAQGAVLNY 120 GDDELIAIRALASRIQLDEAAAKVNLEIAPRFMNITDIEANSAAARVPLSPAAQGAVLNY Sbjct: 71 GDDELIAIRALASRIQLDEAAAKVNLEIAPRFMNITDIEANSAAARVPLSPAAQGAVLNY 130 Query: 121 DLLASSGQGQHALGGLFDARWFSGSAVVSSSALGYTGNSGGVSARLESTLTYSQPASLTR 180 DLLASSGQGQHALGGLFDARWFSGSAVVSSSALGYTGNSGGVSARLESTLTYSQPASLTR Sbjct: 131 DLLASSGQGQHALGGLFDARWFSGSAVVSSSALGYTGNSGGVSARLESTLTYSQPASLTR 190 Query: 181 YRLGDVINSSLAWSRSVRLGGFQYASDFNLRPDLVRFPTPSLGGETVVPSTVDLFVNGVR 240 YRLGDVINSSLAWSRSVRLGGFQYASDFNLRPDLVRFPTPSLGGETVVPSTVDLFVNGVR Sbjct: 191 YRLGDVINSSLAWSRSVRLGGFQYASDFNLRPDLVRFPTPSLGGETVVPSTVDLFVNGVR 250 Query: 241 QLSQPVPPGPFEIRQPPIASGAGQIAVAVTDELGRQTLRTVNFYATDRLLKPGLSSYSAE 300 QLSQPVPPGPFEIRQPPIASGAGQIAVAVTDELGRQTLRTVNFYATDRLLKPGLSSYSAE Sbjct: 251 QLSQPVPPGPFEIRQPPIASGAGQIAVAVTDELGRQTLRTVNFYATDRLLKPGLSSYSAE 310 Query: 301 GGWVRRHYGLRSNDYGQFALSGTARHGVSDWLTLEGHAEAMHGLKLGGGGAVLNLGNRAV 360 GGWVRRHYGLRSNDYGQFALSGTARHGVSDWLTLEGHAEAMHGLKLGGGGAV NLGNRAV Sbjct: 311 GGWVRRHYGLRSNDYGQFALSGTARHGVSDWLTLEGHAEAMHGLKLGGGGAVFNLGNRAV 370 Query: 361 LASALSASSAASGSGQQFSLAIERNADPLSLSLSRTQATRDYQDIGALQGAPVSRSATVA 420 LASALSAS+AASGSGQQFSLAIERNADPLSLSLSRTQATRDYQDIGALQGAPVSRSATVA Sbjct: 371 LASALSASNAASGSGQQFSLAIERNADPLSLSLSRTQATRDYQDIGALQGAPVSRSATVA 430 Query: 421 TLGMNLGSAGSLSMAYARSKSPLLFTDLGTTGLADSETLTLTYFKSLGSTASMYLTGYRD 480 TLGMNLGSAGSLSMAYARSKSPLLFTDLGTTGLADSETLTLTYFKSLGSTASMYLTGYRD Sbjct: 431 TLGMNLGSAGSLSMAYARSKSPLLFTDLGTTGLADSETLTLTYFKSLGSTASMYLTGYRD 490 Query: 481 FRNSGYGASVGIIIPLGGRDVVGASMNNNNGQRTATLQASRSTVAIGDLGWQLQDTEGSY 540 FRNSGYGASVGIIIPLGGRDVVGASMNNNNGQRTATLQASRSTVAIGDLGWQLQDTEGSY Sbjct: 491 FRNSGYGASVGIIIPLGGRDVVGASMNNNNGQRTATLQASRSTVAIGDLGWQLQDTEGSY 550 Query: 541 QQRLAQLNYKSRVGSFSAGVSQGGAISSQRLGARGALAFMDGGVFASDWIDDSFAVVNAS 600 QQRLAQLNYKSRVGSFSAGVSQGG ISSQRLGARGALAFMDGGVFASDWIDDSFAVVNAS Sbjct: 551 QQRLAQLNYKSRVGSFSAGVSQGGTISSQRLGARGALAFMDGGVFASDWIDDSFAVVNAS 610 Query: 601 GVKNVGIYTENRYAGRTDDNGQLLLTDLRAYDVNKISVDVLDLPLTLQLDQSDQYVKPRD 660 GVKNVGIY ENRYAGRTDDNGQLLLTDLRAYDVNKISVDVLDLPLTLQLDQSDQYVKPRD Sbjct: 611 GVKNVGIYNENRYAGRTDDNGQLLLTDLRAYDVNKISVDVLDLPLTLQLDQSDQYVKPRD 670 Query: 661 RSGVIVHFNARRASDVTLTLKDAAGNYLPIGASIRVRETGLQAPVGYDGVSYLQELAPLN 720 RSGVIVHFNARRASDVTLTLKDAAGNYLPIGASIRVRETGL+APVGYDGVSYLQELAPLN Sbjct: 671 RSGVIVHFNARRASDVTLTLKDAAGNYLPIGASIRVRETGLEAPVGYDGVSYLQELAPLN 730 Query: 721 TLDVLLPSGDQCHATLVPPVRSEGGMANEVVVCR 754 TLDVLLPSGDQCHATLVPPVRSEGGMANEVVVCR Sbjct: 731 TLDVLLPSGDQCHATLVPPVRSEGGMANEVVVCR 764 >B7J3A9.1 B7J3A9_ACIF2 Outer membrane usher protein, putative Length = 814 Score = 486 bits (1252), Expect = e-135, Method: Compositional matrix adjust. Identities = 301/756 (39%), Positives = 422/756 (55%), Gaps = 40/756 (5%) Query: 16 GDELLLLEVAINGRDTNLVAQFTRRQRELYASAAELRSLNLRVDG----GDDELIAIRAL 71 G E LLL V +NG T + +F + L A EL L +V G D +A+ L Sbjct: 42 GGETLLLSVVVNGYHTGKIGEFRLNKGTLRARPQELHDLGFKVPKSIPVGTDGRVALSEL 101 Query: 72 ASRI-QLDEAAAKVNLEI-APRFMNITDIEANSAAARVPLSPAAQGAVLNYDLLASSGQG 129 +D+A + + + + R + S A+ +P+ + GA L+YD+ +S G Sbjct: 102 PDFAWHIDQATQTLYVTVGSKRLLPQLLHTETSPASELPVQ-SGLGATLDYDVTGTSVAG 160 Query: 130 QHALGGLFDARWFSGSAVVSSSALGYTGNSG---GVSA--RLESTLTYSQPASLTRYRLG 184 Q G F+ R FS V SS L Y G G +A RL ST TYS P +L RYR+G Sbjct: 161 QKLGAGQFNFRAFSPWGVASSGLLAYVGGGPQGLGTNAVIRLNSTYTYSDPETLRRYRVG 220 Query: 185 DVINSSLAWSRSVRLGGFQYASDFNLRPDLVRFPTPSLGGETVVPSTVDLFVNGVRQLSQ 244 D I L+W+R VRLGG Q +SDF++RPDL+ FP P + G VPSTV++ VNG++ LS Sbjct: 221 DFITGGLSWTRPVRLGGIQISSDFSMRPDLITFPLPGVSGTVAVPSTVNVLVNGMQVLSS 280 Query: 245 PVPPGPFEIRQPPIASGAGQIAVAVTDELGRQTLRTVNFYATDRLLKPGLSSYSAEGGWV 304 V PGPFEI Q P+ +GAG + VT+ LG+Q T+ FYA+ LL PGL ++SA G+V Sbjct: 281 QVRPGPFEIPQVPMITGAGTVVTTVTNALGQQVTTTLPFYASANLLAPGLQTFSAGLGFV 340 Query: 305 RRHYGLRSNDYGQFALSGTARHGVSDWLTLEGHAEAMHGLKLGGGGAVLNLGNRAVLASA 364 R ++G SNDYG A S T R G++D LT+E HAE G+ + GGG V+N+ NR VL + Sbjct: 341 RLNWGFLSNDYGPLAGSITFRRGLTDALTVEAHAEGTRGVAMAGGGIVVNIDNRGVLNLS 400 Query: 365 LSASSAASGSGQQFSLAIERNADPLSLSLSRTQATRDYQDIGALQGAPVSRSATVATLGM 424 + S++ +G QFS+ ++R S S A D++DI A+ G PV A +G+ Sbjct: 401 AAGSTSQGHTGAQFSVGVQRIGRVFSAGASAIFADPDFRDIAAMNGDPVPTRQISANVGL 460 Query: 425 NLGSAGSLSMAYA---RSKSPLLFTDLGTTGLADSE-----------------TLTLTYF 464 +LG GS ++YA R+ + + G +E L+ +Y Sbjct: 461 SLGRFGSFGISYAGIDRNAASMPIPVYAPPGTVVTEGGAPVSVYYFLPAEHAHILSASYS 520 Query: 465 KSLGSTASMYLTGYRDFRNSG-YGASVGIIIPLGGRDVVGASMNNNNGQRTATLQASRST 523 +G S Y TGY DF NSG G +G+ IPLG R +G S+ +++G +A +Q +S Sbjct: 521 LQIGPV-SFYATGYHDFANSGDSGVQMGVTIPLGSRSSIGGSLASSSGNDSAQVQLMQSP 579 Query: 524 VAIGDLGWQLQDTEGSYQQRLAQLNYKSRVGSFSAGVSQGGAISSQRL---GARGALAFM 580 V IGD G+Q T G Q QL YKS G SAG S+ I Q L RGAL+FM Sbjct: 580 VTIGDWGYQAYATTGRTSQEFGQLQYKSPWGLVSAGASR---IDRQTLVQGEVRGALSFM 636 Query: 581 DGGVFASDWIDDSFAVVNASGVKNVGIYTENRYAGRTDDNGQLLLTDLRAYDVNKISVDV 640 DGG+FAS+ I++SFA+V+ G N+ + ENR GRTD GQLL+ DLR+Y N I++D Sbjct: 637 DGGLFASNTINNSFAIVDTDGFGNIRVLDENRLVGRTDSAGQLLVPDLRSYQANHIAIDP 696 Query: 641 LDLPLTLQLDQSDQYVKPRDRSGVIVHFNARRASDVTLTLKDAAGNYLPIGASIRVRETG 700 D+P+ L + + V+P DRSGV+V F R + L L D +G LP+G+ +++TG Sbjct: 697 NDVPINATLPYATRDVRPPDRSGVVVKFPIRASYGALLRLVDQSGKNLPVGSVATLQKTG 756 Query: 701 LQAPVGYDGVSYLQELAPLNTLDVLLPSGDQCHATL 736 + PVGYDG +Y+ L+P N L V P G +C T Sbjct: 757 VSVPVGYDGEAYVVNLSPHNRLLVERPDGQRCIVTF 792 >B5EJ71.1 B5EJ71_ACIF5 Fimbrial biogenesis outer membrane usher protein Length = 807 Score = 486 bits (1251), Expect = e-135, Method: Compositional matrix adjust. Identities = 301/756 (39%), Positives = 422/756 (55%), Gaps = 40/756 (5%) Query: 16 GDELLLLEVAINGRDTNLVAQFTRRQRELYASAAELRSLNLRVDG----GDDELIAIRAL 71 G E LLL V +NG T + +F + L A EL L +V G D +A+ L Sbjct: 35 GGETLLLSVVVNGYHTGKIGEFRLNKGTLRARPQELHDLGFKVPKSIPVGTDGRVALSEL 94 Query: 72 ASRI-QLDEAAAKVNLEI-APRFMNITDIEANSAAARVPLSPAAQGAVLNYDLLASSGQG 129 +D+A + + + + R + S A+ +P+ + GA L+YD+ +S G Sbjct: 95 PDFAWHIDQATQTLYVTVGSKRLLPQLLHTETSPASELPVQ-SGLGATLDYDVTGTSVAG 153 Query: 130 QHALGGLFDARWFSGSAVVSSSALGYTGNSG---GVSA--RLESTLTYSQPASLTRYRLG 184 Q G F+ R FS V SS L Y G G +A RL ST TYS P +L RYR+G Sbjct: 154 QKLGAGQFNFRAFSPWGVASSGLLAYVGGGPQGLGTNAVIRLNSTYTYSDPETLRRYRVG 213 Query: 185 DVINSSLAWSRSVRLGGFQYASDFNLRPDLVRFPTPSLGGETVVPSTVDLFVNGVRQLSQ 244 D I L+W+R VRLGG Q +SDF++RPDL+ FP P + G VPSTV++ VNG++ LS Sbjct: 214 DFITGGLSWTRPVRLGGIQISSDFSMRPDLITFPLPGVSGTVAVPSTVNVLVNGMQVLSS 273 Query: 245 PVPPGPFEIRQPPIASGAGQIAVAVTDELGRQTLRTVNFYATDRLLKPGLSSYSAEGGWV 304 V PGPFEI Q P+ +GAG + VT+ LG+Q T+ FYA+ LL PGL ++SA G+V Sbjct: 274 QVRPGPFEIPQVPMITGAGTVVTTVTNALGQQVTTTLPFYASANLLAPGLQTFSAGLGFV 333 Query: 305 RRHYGLRSNDYGQFALSGTARHGVSDWLTLEGHAEAMHGLKLGGGGAVLNLGNRAVLASA 364 R ++G SNDYG A S T R G++D LT+E HAE G+ + GGG V+N+ NR VL + Sbjct: 334 RLNWGFLSNDYGPLAGSITFRRGLTDALTVEAHAEGTRGVAMAGGGIVVNIDNRGVLNLS 393 Query: 365 LSASSAASGSGQQFSLAIERNADPLSLSLSRTQATRDYQDIGALQGAPVSRSATVATLGM 424 + S++ +G QFS+ ++R S S A D++DI A+ G PV A +G+ Sbjct: 394 AAGSTSQGHTGAQFSVGVQRIGRVFSAGASAIFADPDFRDIAAMNGDPVPTRQISANVGL 453 Query: 425 NLGSAGSLSMAYA---RSKSPLLFTDLGTTGLADSE-----------------TLTLTYF 464 +LG GS ++YA R+ + + G +E L+ +Y Sbjct: 454 SLGRFGSFGISYAGIDRNAASMPIPVYAPPGTVVTEGGAPVSVYYFLPAEHAHILSASYS 513 Query: 465 KSLGSTASMYLTGYRDFRNSG-YGASVGIIIPLGGRDVVGASMNNNNGQRTATLQASRST 523 +G S Y TGY DF NSG G +G+ IPLG R +G S+ +++G +A +Q +S Sbjct: 514 LQIGPV-SFYATGYHDFANSGDSGVQMGVTIPLGSRSSIGGSLASSSGNDSAQVQLMQSP 572 Query: 524 VAIGDLGWQLQDTEGSYQQRLAQLNYKSRVGSFSAGVSQGGAISSQRL---GARGALAFM 580 V IGD G+Q T G Q QL YKS G SAG S+ I Q L RGAL+FM Sbjct: 573 VTIGDWGYQAYATTGRTSQEFGQLQYKSPWGLVSAGASR---IDRQTLVQGEVRGALSFM 629 Query: 581 DGGVFASDWIDDSFAVVNASGVKNVGIYTENRYAGRTDDNGQLLLTDLRAYDVNKISVDV 640 DGG+FAS+ I++SFA+V+ G N+ + ENR GRTD GQLL+ DLR+Y N I++D Sbjct: 630 DGGLFASNTINNSFAIVDTDGFGNIRVLDENRLVGRTDSAGQLLVPDLRSYQANHIAIDP 689 Query: 641 LDLPLTLQLDQSDQYVKPRDRSGVIVHFNARRASDVTLTLKDAAGNYLPIGASIRVRETG 700 D+P+ L + + V+P DRSGV+V F R + L L D +G LP+G+ +++TG Sbjct: 690 NDVPINATLPYATRDVRPPDRSGVVVKFPIRASYGALLRLVDQSGKNLPVGSVATLQKTG 749 Query: 701 LQAPVGYDGVSYLQELAPLNTLDVLLPSGDQCHATL 736 + PVGYDG +Y+ L+P N L V P G +C T Sbjct: 750 VSVPVGYDGEAYVVNLSPHNRLLVERPDGQRCIVTF 785 >B1T5X2.1 B1T5X2_9BURK Fimbrial biogenesis outer membrane usher protein Length = 794 Score = 461 bits (1186), Expect = e-127, Method: Compositional matrix adjust. Identities = 300/767 (39%), Positives = 428/767 (55%), Gaps = 42/767 (5%) Query: 1 LILLLSCLPGWAAEPGDELLLLEVAINGRDTNLVAQFTRRQRELYASAAELRSLNLRVD- 59 ++L+L+ +P E + LLLEV ING T + +FT L A EL L RV Sbjct: 9 IVLVLTIMPRLT-EAAGQTLLLEVQINGHPTGKIGEFTLHDGALLARRGELLDLGFRVPD 67 Query: 60 ---GGDDELIAIRALAS----RIQLDEA--AAKVNLEIAPRFMNITDIEANSAAARVPLS 110 G D LI++ L +Q + N + P + Sbjct: 68 ALASGPDSLISLSDLPGVTWRLVQTSQTLYVTAANDRLLPALLQPEGSSGGGGVE----- 122 Query: 111 PAAQGAVLNYDLLASSGQGQHALGGLFDARWFSGSAVVSSSALGYTGNSGG-----VSAR 165 + GA LNYD+ + Q+ GLFD R FS VVSS L Y G G + R Sbjct: 123 -SGTGATLNYDVTGTGTGRQNVANGLFDLRAFSRWGVVSSGLLAYAGGRPGGPGTESAIR 181 Query: 166 LESTLTYSQPASLTRYRLGDVINSSLAWSRSVRLGGFQYASDFNLRPDLVRFPTPSLGGE 225 L+ST T S +L RYRLGD I L W+R VRLGG Q SDF++RPDLV FP P + G Sbjct: 182 LDSTYTLSDRDTLRRYRLGDFITGGLGWTRPVRLGGAQITSDFSMRPDLVTFPVPLVSGS 241 Query: 226 TVVPSTVDLFVNGVRQLSQPVPPGPFEIRQPPIASGAGQIAVAVTDELGRQTLRTVNFYA 285 VPSTVD+ NG+R S V GPFEI Q P+ +GAG I++ +T+ LGRQ + T+ FYA Sbjct: 242 AAVPSTVDVLANGIRLFSHQVEAGPFEIPQLPVVTGAGTISMTLTNALGRQVVATLPFYA 301 Query: 286 TDRLLKPGLSSYSAEGGWVRRHYGLRSNDYGQFALSGTARHGVSDWLTLEGHAEAMHGLK 345 + LL PGL ++S + G VRR++GL SNDYG FA + T R G+S LT+E AE G Sbjct: 302 SSALLAPGLQTFSVQAGAVRRNWGLLSNDYGNFAATATWRRGLSPALTVEASAEGTAGTF 361 Query: 346 LGGGGAVLNLGNRAVLASALSASSAASGSGQQFSLAIERNADPLSLSLSRTQATRDYQDI 405 + G G V+N+GN A+L A +AS+ + G+G Q S+ ++R S S S + A ++DI Sbjct: 362 MAGSGLVVNVGNLAMLNVAAAASTGSGGTGTQLSVGVQRLGAVFSFSSSVSVAGHGFRDI 421 Query: 406 GALQGAPVSRSATVATLGMNLGSAGSLSMAYA-----RSKSPL-LFTDLGTTGLADSETL 459 A+ G PV R A++G++LG GS+ AYA + SP+ L+ G+T ++ Sbjct: 422 AAMNGDPVPRLRLNASVGLSLGRFGSVGAAYAGVDRDTAPSPIRLYVPPGSTVARNASLG 481 Query: 460 TLTYFKSLGSTA-------------SMYLTGYRDFRNSG-YGASVGIIIPLGGRDVVGAS 505 YF+ T S+Y+TG+ DF ++G G G+ IPLG R V AS Sbjct: 482 GAVYFQPAQHTHILSASYSVPVRNLSIYVTGFHDFASNGSSGILAGLTIPLGTRTSVSAS 541 Query: 506 MNNNNGQRTATLQASRSTVAIGDLGWQLQDTEGSYQQRLAQLNYKSRVGSFSAGVSQGGA 565 + + + +QA++S V IGD G+QL +EG+ AQL YKS +AG + Sbjct: 542 VGSGSSGGYRQVQAAQSAVTIGDWGYQLYGSEGNSSHEFAQLQYKSPWALLTAGADRIDG 601 Query: 566 ISSQRLGARGALAFMDGGVFASDWIDDSFAVVNASGVKNVGIYTENRYAGRTDDNGQLLL 625 +S RL ++GA++F+DGG+FAS+ I+DSFAVV+ G+++V + ENR AGRTD G+ L+ Sbjct: 602 QTSLRLESQGAVSFVDGGLFASNTIEDSFAVVDTDGLEHVRVLYENRDAGRTDSAGRRLV 661 Query: 626 TDLRAYDVNKISVDVLDLPLTLQLDQSDQYVKPRDRSGVIVHFNARRASDVTLTLKDAAG 685 DLR++DVN I ++ D+P + + + V+P+DRSGV+V F + + L L D AG Sbjct: 662 PDLRSFDVNHIGIEPTDIPPDAAIAYTTREVRPQDRSGVVVRFPVQISHGALLRLVDEAG 721 Query: 686 NYLPIGASIRVRETGLQAPVGYDGVSYLQELAPLNTLDVLLPSGDQC 732 + +G++ ++R TG PVGYDG +Y+ +L N LDV+ G +C Sbjct: 722 TPVAVGSTAKLRATGTTVPVGYDGNAYVLDLDAHNELDVVRLDGRRC 768 >Q2T078.1 Q2T078_BURTA Fimbrial usher protein Length = 842 Score = 400 bits (1027), Expect = e-109, Method: Compositional matrix adjust. Identities = 273/732 (37%), Positives = 388/732 (53%), Gaps = 22/732 (3%) Query: 9 PGWAAEPGDELLLLEVAINGRDTNLVAQFTRRQRELYASAAELRSLNL---RVDGGDDEL 65 PG A L L V++NG+ T+L+ F YAS +L + + R+ + L Sbjct: 100 PGAGASVPASDLYLGVSLNGQPTHLIVHFAVADGRFYASQDDLNDIGIATSRLRQPANAL 159 Query: 66 IAIRALAS-RIQLDEAAAKVNLEIAPRFMNITDIEANSAAARVPLSPAAQGAVLNYDLLA 124 +A+ AL R + D A ++L+ AP + I A A + A +GAVLNYDL A Sbjct: 160 VALDALDGLRYRYDAARQTIDLD-APDSLRIPHTFDTRALAPTLPASAGRGAVLNYDLYA 218 Query: 125 SSGQGQHALGGLF-DARWFSGSAVVSSSALGYTGNSGGVSARLESTLTYSQPASLTRYRL 183 + A L+ +AR+F + V SS+ + + G R +++ + S P SLT + Sbjct: 219 QTAD--RAGAALWHEARYFDPAGVFSSTGVAFFQRGGQRYTRYDTSWSMSDPKSLTTTQF 276 Query: 184 GDVINSSLAWSRSVRLGGFQYASDFNLRPDLVRFPTPSLGGETVVPSTVDLFVNGVRQLS 243 GD I+SSLAW+RS+RLGG Q+ S+F LRPDLV FP P+L G VVPSTVDL+VNGVRQ S Sbjct: 277 GDTISSSLAWTRSLRLGGLQWRSNFALRPDLVTFPVPTLAGTAVVPSTVDLYVNGVRQFS 336 Query: 244 QPVPPGPFEIRQPPIASGAGQIAVAVTDELGRQTLRTVNFYATDRLLKPGLSSYSAEGGW 303 VP GPF I P +GAG V D LGR ++ Y R+L PGL+SYS E G+ Sbjct: 337 GDVPSGPFVINSVPGITGAGNATVVTRDALGRTIATSLPLYIDTRMLAPGLASYSIEAGF 396 Query: 304 VRRHYGLRSNDYGQF-ALSGTARHGVSDWLTLEGHAEAMHGLKLGGGGAVLNLGNRAVLA 362 +RR +GLRS DY + A+S TAR+G SD LT+E HAEA GL G GA++ LG V A Sbjct: 397 LRRAWGLRSFDYARRPAVSATARYGASDSLTVEAHAEATPGLYNAGAGALVRLGGAGV-A 455 Query: 363 SALSASSAASGSGQQFSLAIERNADPLSLSLSRTQATRDYQDIGALQGAPVSRSATVATL 422 SA A SA +G Q L + S+ +A RDY D+ A G PV + TL Sbjct: 456 SASVAQSAGRLAGTQAGLGYQLVLSRCSIDAQTLRAFRDYGDLAARDGTPVPSATDRITL 515 Query: 423 GMNLGSAGSLSMAYARSKSPLLFTDLGTTGLADSETLTLTYFKSLGSTASMYLTGYRDF- 481 + + +L+++Y K P GL S +++Y ++GS AS+ ++ ++DF Sbjct: 516 SLPFIRSQTLAISYIGLKYP---------GLQSSRIGSVSYSVNVGSQASINVSAFQDFH 566 Query: 482 RNSGYGASVGIIIPLGGRDVVGASMNNNNGQRTATLQASRSTVAIGDLGWQLQ-DTEGSY 540 + G + + + LG R + A++ NG+ + A R+ G GW Q G Sbjct: 567 QRDSRGVFMSLNVALGNRTSINANVGRQNGETVFNVNAMRAPDYGGGFGWSAQAGGAGGM 626 Query: 541 QQRLAQLNYKSRVGSFSAGVSQGGAISSQRLGARGALAFMDGGVFASDWIDDSFAVVNAS 600 + AQ Y R G +A + L GA+ MDG + IDD FA+V+ Sbjct: 627 RYGQAQAQYLGRAGEATALAQTTAGHQNAALDVTGAVVLMDGRALLARRIDDGFALVSTD 686 Query: 601 GVKNVGIYTENRYAGRTDDNGQLLLTDLRAYDVNKISVDVLDLPLTLQLDQSDQYVKPRD 660 V + ENR G TD NG LL+ DL AY N+I +D L LPL ++ + V P+ Sbjct: 687 ASPGVPVLHENRVIGTTDGNGHLLIPDLNAYQNNRIGIDTLKLPLDARVSGTVVNVVPQS 746 Query: 661 RSGVIVHFNARRASDVTLTLKDAAGNYLPIGASIRVRETGLQAPVGYDGVSYLQELAPLN 720 RSGV+ HF R ++ L+DA+G LP G S+ RE+G VGYDG++++ L +N Sbjct: 747 RSGVLAHFAITREQSASIALEDASGAPLPPGLSVTHRESGASTIVGYDGLTFVTGLGAVN 806 Query: 721 TLDVLLPSGDQC 732 L++ G +C Sbjct: 807 HLEI-AGHGKRC 817 >D8P6G5.1 D8P6G5_RALSO Putative fimbrial biogenesis outer membrane usher protein Length = 775 Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust. Identities = 262/718 (36%), Positives = 374/718 (52%), Gaps = 35/718 (4%) Query: 16 GDELLLLEVAINGRDTNLVAQFTRRQRELYASAAELRSLNLRVDG---GDDELIAIRALA 72 G + L LE ING T +A+F L A+A ELR++ +R DG + LIA+ +A Sbjct: 33 GMDDLYLEAVINGTPTRTIARFRLHDGRLSATAGELRAVGIRTDGLRPDANGLIALDGIA 92 Query: 73 SRIQLDEAAAKVNLEIAP---RFM-----NITDIEANSAAARVPLSPAAQGAVLNYDLL- 123 + E+ P RF+ + D+ RVP + + G VLNYD Sbjct: 93 --------GLRYTYEVRPQQVRFVLDDARRVPDVLTAHTRPRVPPT-SGTGLVLNYDAYL 143 Query: 124 --ASSGQGQHALGGLFDARWFSGSAVVSSSALGYTGNSGGVSARLESTLTYSQPASLTRY 181 + G G +LG + R F V S+S + RLE++ +S P LT Sbjct: 144 QPTTPGGGGASLGVFSEQRVFHPGGVFSNSGVALAARGADRYTRLETSWAHSDPERLTTL 203 Query: 182 RLGDVINSSLAWSRSVRLGGFQYASDFNLRPDLVRFPTPSLGGETVVPSTVDLFVNGVRQ 241 RLGD + +SL WSR+VRLGG Q+ +F+LRPDLV +P P LG VP+ VDL+VN VRQ Sbjct: 204 RLGDTVTASLGWSRAVRLGGMQWQRNFDLRPDLVTYPLPLLGASAAVPTAVDLYVNNVRQ 263 Query: 242 LSQPVPPGPFEIRQPPIASGAGQIAVAVTDELGRQTLRTVNFYATDRLLKPGLSSYSAEG 301 S V GPF + P +GAGQ + V D LGR + +V Y LL GLS Y+ E Sbjct: 264 FSGQVGGGPFVLNTTPAITGAGQAVIVVKDALGRDVVTSVPLYIDTGLLAAGLSDYAVEA 323 Query: 302 GWVRRHYGLRSNDYGQF-ALSGTARHGVSDWLTLEGHAEAMHGLKLGGGGAVLNLGNRAV 360 G++R YG+RS DY + ALS + RHG+S LTLE HAEA GL G G + LG V Sbjct: 324 GFLRNQYGMRSFDYARSPALSASLRHGLSGSLTLESHAEAARGLANLGAGMRVGLGQAGV 383 Query: 361 LASALSASSAASGSGQQFSLAIERNADPLSLSLSRTQATRDYQDIGALQGAPVSRSATVA 420 + A S + +G Q SL + A +S+ L T+ Y+D+ + GAP RS Sbjct: 384 ASGAASLAQGGGATGAQGSLGYQYRAPEVSIDLQGTRTFGTYRDLASTAGAPFYRSLLRG 443 Query: 421 TLGMNLGSAGSLSMAYARSKSPLLFTDLGTTGLADSETLTLTYFKSLGSTASMYLTGYRD 480 T+ +G GS++ +Y DL G S ++L+Y LG S+ + Y+D Sbjct: 444 TVSRPVGRTGSVAASY---------IDLSAPGSDRSRIVSLSYAALLGRDLSLSASAYQD 494 Query: 481 FRN-SGYGASVGIIIPLGGRDVVGASMNNNNGQRTATLQASRSTVAIGDLGWQLQDTEGS 539 + G + + + LG AS+ +++G+ AT+ A R+ G +GWQLQ +E Sbjct: 495 LVDRRARGVLLTLSVALGNDTNAAASIGSDHGRAAATVSAVRTPDYGGGVGWQLQSSESG 554 Query: 540 YQQR-LAQLNYKSRVGSFSAGVSQGGAISSQRLGARGALAFMDGGVFASDWIDDSFAVVN 598 Q+R LAQ+NY+ R G A V + + L G+L MDG V I+D+FA+V Sbjct: 555 AQRRSLAQVNYRGRYGDAFAAVQEVDGHTGTALDMAGSLVLMDGAVLPGRRINDAFALVT 614 Query: 599 ASGVKNVGIYTENRYAGRTDDNGQLLLTDLRAYDVNKISVDVLDLPLTLQLDQSDQYVKP 658 + +V + ENR GRT+ G LL+ DL AY+ N++++D L LP+ +L S V P Sbjct: 615 TEDMADVPVTFENRLMGRTNARGHLLVPDLVAYENNRVAIDPLVLPVNARLAASSTTVAP 674 Query: 659 RDRSGVIVHFNARRASDVTLTLKDAAGNYLPIGASIRVRETGLQAPVGYDGVSYLQEL 716 DRSGV+V F+ L L DA G LP G+ + TG + P+GYDG++++ L Sbjct: 675 ADRSGVLVRFHVETFHGAQLRLVDAQGQPLPAGSHATLARTGARYPIGYDGLAFIDAL 732 >B5SBP9.1 B5SBP9_RALSO Outer membrane usher protein Length = 777 Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust. Identities = 259/713 (36%), Positives = 371/713 (52%), Gaps = 25/713 (3%) Query: 16 GDELLLLEVAINGRDTNLVAQFTRRQRELYASAAELRSLNLRVD------GGDDELIAIR 69 G + L LE ING T +A+F L A+A ELR++ +R D G L + Sbjct: 35 GTDDLYLEAVINGTPTRTIARFRLHDGRLSATAGELRAVGIRTDDLRPDANGQIALDGVA 94 Query: 70 ALASRIQLDEAAAKVNLEIAPRFMNITDIEANSAAARVPLSPAAQGAVLNYDLL---ASS 126 L ++ ++ L+ A R + D+ RVP + + G VLNYD + Sbjct: 95 GLRYTYEVRAQQVRLVLDDARR---VPDVLTAHTRPRVPPT-SGTGLVLNYDAYLQPTTP 150 Query: 127 GQGQHALGGLFDARWFSGSAVVSSSALGYTGNSGGVSARLESTLTYSQPASLTRYRLGDV 186 G G +LG + R F V S+S + RLE++ +S P LT RLGD Sbjct: 151 GGGGASLGVFSEQRVFHPGGVFSNSGVALAARGADRYTRLETSWAHSDPERLTTLRLGDT 210 Query: 187 INSSLAWSRSVRLGGFQYASDFNLRPDLVRFPTPSLGGETVVPSTVDLFVNGVRQLSQPV 246 + +SL WSR+VRLGG Q+ +F+LRPDLV +P P L VP+ VDL+VN VRQ S V Sbjct: 211 VTASLGWSRAVRLGGMQWQRNFDLRPDLVTYPLPLLSASAAVPTAVDLYVNNVRQFSGQV 270 Query: 247 PPGPFEIRQPPIASGAGQIAVAVTDELGRQTLRTVNFYATDRLLKPGLSSYSAEGGWVRR 306 GPF + P +GAGQ + V D LGR + +V Y LL GLS Y+ E G++R Sbjct: 271 GGGPFVLNTTPAITGAGQAVIVVKDALGRDVVTSVPLYIDTGLLAAGLSDYAVEAGFLRN 330 Query: 307 HYGLRSNDYGQF-ALSGTARHGVSDWLTLEGHAEAMHGLKLGGGGAVLNLGNRAVLASAL 365 YG+RS DY + ALS + RHG+S LTLE HAEA GL G G + LG V + A Sbjct: 331 QYGMRSFDYARSPALSASLRHGLSGSLTLESHAEAARGLANLGAGMRVGLGQAGVASGAA 390 Query: 366 SASSAASGSGQQFSLAIERNADPLSLSLSRTQATRDYQDIGALQGAPVSRSATVATLGMN 425 S + +G Q SL + A +S+ L T+ Y+D+ + GAP RS T+ Sbjct: 391 SFAQGGGATGAQGSLGYQYRAPEVSIDLQGTRTFGTYRDLASTAGAPFYRSLLRGTVSRP 450 Query: 426 LGSAGSLSMAYARSKSPLLFTDLGTTGLADSETLTLTYFKSLGSTASMYLTGYRDFRN-S 484 +G GS++ +Y DL G S ++L+Y LG S+ + Y+D + Sbjct: 451 IGRTGSVAASY---------IDLSAPGSDRSRIVSLSYATLLGRDLSLSASAYQDLADRR 501 Query: 485 GYGASVGIIIPLGGRDVVGASMNNNNGQRTATLQASRSTVAIGDLGWQLQDTEGSYQQR- 543 G + + + LG AS+ +++G+ AT+ A R+ G +GWQLQ +E Q+R Sbjct: 502 ARGVLLTLSVALGNDTNAAASIGSDHGRAAATVSAVRTPDYGGGVGWQLQSSESGAQRRS 561 Query: 544 LAQLNYKSRVGSFSAGVSQGGAISSQRLGARGALAFMDGGVFASDWIDDSFAVVNASGVK 603 LAQ+NY+ R G A V + + L G+L MDG V I+D+FA+V G+ Sbjct: 562 LAQVNYRGRYGDAFAAVQEIDGHTGSALDMTGSLVLMDGAVLPGRRINDAFALVTTEGMA 621 Query: 604 NVGIYTENRYAGRTDDNGQLLLTDLRAYDVNKISVDVLDLPLTLQLDQSDQYVKPRDRSG 663 +V + ENR GRT+ G LL+ DL AY+ N++++D L LP+ +L S V P DRSG Sbjct: 622 DVPVTFENRLMGRTNAQGHLLVPDLVAYENNRVAIDPLVLPVNARLAASSTTVAPADRSG 681 Query: 664 VIVHFNARRASDVTLTLKDAAGNYLPIGASIRVRETGLQAPVGYDGVSYLQEL 716 V+V F+ L L DA G LP G+ + TG + P+GYDG++++ L Sbjct: 682 VLVRFHVETFHGAQLRLVDAQGQPLPAGSHATLARTGARYPIGYDGLAFIDAL 734 >A3RNN6.1 A3RNN6_RALSO SefC Length = 795 Score = 387 bits (993), Expect = e-105, Method: Compositional matrix adjust. Identities = 259/713 (36%), Positives = 371/713 (52%), Gaps = 25/713 (3%) Query: 16 GDELLLLEVAINGRDTNLVAQFTRRQRELYASAAELRSLNLRVD------GGDDELIAIR 69 G + L LE ING T +A+F L A+A ELR++ +R D G L + Sbjct: 53 GTDDLYLEAVINGTPTRTIARFRLHDGRLSATAGELRAVGIRTDDLRPDANGQIALDGVA 112 Query: 70 ALASRIQLDEAAAKVNLEIAPRFMNITDIEANSAAARVPLSPAAQGAVLNYDLL---ASS 126 L ++ ++ L+ A R + D+ RVP + + G VLNYD + Sbjct: 113 GLRYTYEVRAQQVRLVLDDARR---VPDVLTAHTRPRVPPT-SGTGLVLNYDAYLQPTTP 168 Query: 127 GQGQHALGGLFDARWFSGSAVVSSSALGYTGNSGGVSARLESTLTYSQPASLTRYRLGDV 186 G G +LG + R F V S+S + RLE++ +S P LT RLGD Sbjct: 169 GGGGASLGVFSEQRVFHPGGVFSNSGVALAARGADRYTRLETSWAHSDPERLTTLRLGDT 228 Query: 187 INSSLAWSRSVRLGGFQYASDFNLRPDLVRFPTPSLGGETVVPSTVDLFVNGVRQLSQPV 246 + +SL WSR+VRLGG Q+ +F+LRPDLV +P P L VP+ VDL+VN VRQ S V Sbjct: 229 VTASLGWSRAVRLGGMQWQRNFDLRPDLVTYPLPLLSASAAVPTAVDLYVNNVRQFSGQV 288 Query: 247 PPGPFEIRQPPIASGAGQIAVAVTDELGRQTLRTVNFYATDRLLKPGLSSYSAEGGWVRR 306 GPF + P +GAGQ + V D LGR + +V Y LL GLS Y+ E G++R Sbjct: 289 GGGPFVLNTTPAITGAGQAVIVVKDALGRDVVTSVPLYIDTGLLAAGLSDYAVEAGFLRN 348 Query: 307 HYGLRSNDYGQF-ALSGTARHGVSDWLTLEGHAEAMHGLKLGGGGAVLNLGNRAVLASAL 365 YG+RS DY + ALS + RHG+S LTLE HAEA GL G G + LG V + A Sbjct: 349 QYGMRSFDYARSPALSASLRHGLSGSLTLESHAEAARGLANLGAGMRVGLGQAGVASGAA 408 Query: 366 SASSAASGSGQQFSLAIERNADPLSLSLSRTQATRDYQDIGALQGAPVSRSATVATLGMN 425 S + +G Q SL + A +S+ L T+ Y+D+ + GAP RS T+ Sbjct: 409 SFAQGGGATGAQGSLGYQYRAPEVSIDLQGTRTFGTYRDLASTAGAPFYRSLLRGTVSRP 468 Query: 426 LGSAGSLSMAYARSKSPLLFTDLGTTGLADSETLTLTYFKSLGSTASMYLTGYRDFRN-S 484 +G GS++ +Y DL G S ++L+Y LG S+ + Y+D + Sbjct: 469 IGRTGSVAASY---------IDLSAPGSDRSRIVSLSYATLLGRDLSLSASAYQDLADRR 519 Query: 485 GYGASVGIIIPLGGRDVVGASMNNNNGQRTATLQASRSTVAIGDLGWQLQDTEGSYQQR- 543 G + + + LG AS+ +++G+ AT+ A R+ G +GWQLQ +E Q+R Sbjct: 520 ARGVLLTLSVALGNDTNAAASIGSDHGRAAATVSAVRTPDYGGGVGWQLQSSESGAQRRS 579 Query: 544 LAQLNYKSRVGSFSAGVSQGGAISSQRLGARGALAFMDGGVFASDWIDDSFAVVNASGVK 603 LAQ+NY+ R G A V + + L G+L MDG V I+D+FA+V G+ Sbjct: 580 LAQVNYRGRYGDAFAAVQEIDGHTGSALDMTGSLVLMDGAVLPGRRINDAFALVTTEGMA 639 Query: 604 NVGIYTENRYAGRTDDNGQLLLTDLRAYDVNKISVDVLDLPLTLQLDQSDQYVKPRDRSG 663 +V + ENR GRT+ G LL+ DL AY+ N++++D L LP+ +L S V P DRSG Sbjct: 640 DVPVTFENRLMGRTNAQGHLLVPDLVAYENNRVAIDPLVLPVNARLAASSTTVAPADRSG 699 Query: 664 VIVHFNARRASDVTLTLKDAAGNYLPIGASIRVRETGLQAPVGYDGVSYLQEL 716 V+V F+ L L DA G LP G+ + TG + P+GYDG++++ L Sbjct: 700 VLVRFHVETFHGAQLRLVDAQGQPLPAGSHATLARTGARYPIGYDGLAFIDAL 752 >Q8XPY8.1 Q8XPY8_RALSO Probable outer membrane usher signal peptide protein Length = 786 Score = 386 bits (991), Expect = e-105, Method: Compositional matrix adjust. Identities = 257/710 (36%), Positives = 374/710 (52%), Gaps = 19/710 (2%) Query: 16 GDELLLLEVAINGRDTNLVAQFTRRQRELYASAAELRSLNLRVDGGDDE---LIAIRALA 72 G + L LE ING T+ +A+ R L A+A ELR+L +R+D + LIA+ +A Sbjct: 44 GTDDLYLEAIINGTPTHTIARLRLRDGRLSAAAGELRALGIRIDDLQPDANGLIALDGVA 103 Query: 73 SRIQLDEAAAKVNLEIAPRFMNITDIEANSAAARVPLSPAAQGAVLNYD--LLASSGQGQ 130 E A+ + + D+ A RVP + + G VLNYD L ++ G Sbjct: 104 GLRYTYEVRAQQVRFVLDDARRVPDVLTVHARPRVPPT-SGTGLVLNYDAYLQPTTPGGD 162 Query: 131 HALGGLF-DARWFSGSAVVSSSALGYTGNSGGVSARLESTLTYSQPASLTRYRLGDVINS 189 A G+F + R+F V S+S + RLE++ +++ P LT RLGD + + Sbjct: 163 GASLGVFSEQRFFHPGGVFSNSGVALAARGADRYTRLETSWSHADPERLTTLRLGDTVTA 222 Query: 190 SLAWSRSVRLGGFQYASDFNLRPDLVRFPTPSLGGETVVPSTVDLFVNGVRQLSQPVPPG 249 +L WSR+VRLGG Q+ +F+LRPDLV +P P L VP+ VDL+VN VRQ S G Sbjct: 223 ALGWSRAVRLGGVQWQRNFDLRPDLVTYPLPLLSASAAVPTAVDLYVNNVRQFSGQARGG 282 Query: 250 PFEIRQPPIASGAGQIAVAVTDELGRQTLRTVNFYATDRLLKPGLSSYSAEGGWVRRHYG 309 PF + P +GAGQ + V D LGR + +V Y LL GLS Y+ E G++R YG Sbjct: 283 PFVLNAAPAVTGAGQAVIVVKDALGRDVVTSVPLYIDTGLLAAGLSDYAVEAGFLRNQYG 342 Query: 310 LRSNDYGQF-ALSGTARHGVSDWLTLEGHAEAMHGLKLGGGGAVLNLGNRAVLASALSAS 368 + + DY + ALS + R+G+S LTLE HAEA GL G G LG V++ A S + Sbjct: 343 VHTFDYARSPALSASLRYGLSGSLTLESHAEAARGLANLGAGMRTRLGQAGVVSGAASVA 402 Query: 369 SAASGSGQQFSLAIERNADPLSLSLSRTQATRDYQDIGALQGAPVSRSATVATLGMNLGS 428 SG Q SL + A +++ L T+ YQD+ + GAP RS T+ +G Sbjct: 403 RGGDASGAQGSLGYQYRAPGIAIDLQGTRTFGTYQDLASTAGAPFYRSLLRGTVSRPVGR 462 Query: 429 AGSLSMAYARSKSPLLFTDLGTTGLADSETLTLTYFKSLGSTASMYLTGYRDFRNS-GYG 487 GS++++Y L G S ++L+Y LG S+ + Y+D +S G Sbjct: 463 TGSVALSY---------IGLSVPGSDRSRIVSLSYAALLGRDLSLSASAYQDLADSRARG 513 Query: 488 ASVGIIIPLGGRDVVGASMNNNNGQRTATLQASRSTVAIGDLGWQLQDTEGSYQQR-LAQ 546 + + LG AS+ +++G+ AT+ A R+ G GWQLQ Q+R LAQ Sbjct: 514 VLLTFSMALGRDANAAASVGSDHGRAEATVSAVRTPDYAGGFGWQLQSGRSGAQRRSLAQ 573 Query: 547 LNYKSRVGSFSAGVSQGGAISSQRLGARGALAFMDGGVFASDWIDDSFAVVNASGVKNVG 606 +NY+ R G A V + +S L A G+L MDG V I+D+FA+V G+ +V Sbjct: 574 VNYRGRYGDAFAAVQEINGQASTALDAAGSLVLMDGAVLPGRRINDAFALVTTEGMADVP 633 Query: 607 IYTENRYAGRTDDNGQLLLTDLRAYDVNKISVDVLDLPLTLQLDQSDQYVKPRDRSGVIV 666 + ENR GRT+ G LL+ DL AY+ N++++D L LP+ +L S + P DRSGV+V Sbjct: 634 VTFENRLMGRTNAQGHLLVPDLVAYENNRVAIDPLALPINARLAASAATLAPTDRSGVLV 693 Query: 667 HFNARRASDVTLTLKDAAGNYLPIGASIRVRETGLQAPVGYDGVSYLQEL 716 HF+ L L DA LP G+ + TG + P+GYDG++++ L Sbjct: 694 HFHVETFRGAQLRLVDALEQPLPAGSHATLARTGARYPIGYDGLAFIDAL 743 >B5RYD6.1 B5RYD6_RALSO Outer membrane usher protein Length = 795 Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust. Identities = 260/711 (36%), Positives = 372/711 (52%), Gaps = 21/711 (2%) Query: 16 GDELLLLEVAINGRDTNLVAQFTRRQRELYASAAELRSLNLRVDG---GDDELIAIRALA 72 G + L LE ING T +A+F L A+A ELR++ +R D + LIA+ +A Sbjct: 53 GTDDLYLEAVINGTPTRTIARFRLHDGRLSATAGELRAVGIRTDDLRPDANGLIALDGVA 112 Query: 73 S-RIQLDEAAAKVNLEIAPRFMNITDIEANSAAARVPLSPAAQGAVLNYDLL---ASSGQ 128 R + A +V L + + D+ RVP + + G VLNYD + G Sbjct: 113 GLRYTYEVRAQQVRL-VLDDARRVPDVLTAHTRPRVPPT-SGTGLVLNYDAYLQPTTPGG 170 Query: 129 GQHALGGLFDARWFSGSAVVSSSALGYTGNSGGVSARLESTLTYSQPASLTRYRLGDVIN 188 G +LG + R F V S+S + RLE++ +S P LT RLGD + Sbjct: 171 GGASLGVFSEQRVFHPGGVFSNSGVALAARGADRYTRLETSWAHSDPERLTTLRLGDTVT 230 Query: 189 SSLAWSRSVRLGGFQYASDFNLRPDLVRFPTPSLGGETVVPSTVDLFVNGVRQLSQPVPP 248 +SL WSR+VRLGG Q+ +F+LRPDLV +P P L VP+ VDL+VN VRQ S V Sbjct: 231 ASLGWSRAVRLGGMQWQRNFDLRPDLVTYPLPLLSASAAVPTAVDLYVNNVRQFSGQVGG 290 Query: 249 GPFEIRQPPIASGAGQIAVAVTDELGRQTLRTVNFYATDRLLKPGLSSYSAEGGWVRRHY 308 GPF + P +GAGQ + V D LGR + +V Y LL GL Y+ E G++R Y Sbjct: 291 GPFVLNTTPAITGAGQAVIVVKDALGRDVVTSVPLYIDTGLLAAGLFDYAVEAGFLRNQY 350 Query: 309 GLRSNDYGQF-ALSGTARHGVSDWLTLEGHAEAMHGLKLGGGGAVLNLGNRAVLASALSA 367 G+RS DY + ALS + RHG+S LTLE HAEA GL G G + LG V + A S Sbjct: 351 GMRSFDYARSPALSASLRHGLSGGLTLESHAEAARGLANLGAGMRVGLGQAGVASGAASF 410 Query: 368 SSAASGSGQQFSLAIERNADPLSLSLSRTQATRDYQDIGALQGAPVSRSATVATLGMNLG 427 + +G Q SL + A +S+ L T+ Y+D+ + GAP RS T+ +G Sbjct: 411 AQGGGATGAQGSLGYQYRAPEVSIDLQGTRTFGTYRDLASTAGAPFYRSLLRGTVSRPIG 470 Query: 428 SAGSLSMAYARSKSPLLFTDLGTTGLADSETLTLTYFKSLGSTASMYLTGYRDFRN-SGY 486 GS++ +Y DL G S ++L+Y LG S+ + Y+D + Sbjct: 471 RTGSVAASY---------IDLSAPGSDRSRIVSLSYAALLGRDLSLSASAYQDLADRRAR 521 Query: 487 GASVGIIIPLGGRDVVGASMNNNNGQRTATLQASRSTVAIGDLGWQLQDTEGSYQQR-LA 545 G + + + LG AS+ ++ G+ AT+ A R+ G +GWQLQ +E Q+R LA Sbjct: 522 GVLLTLSVALGRDTNAAASIGSDRGRAAATVSAVRTPDYGGGVGWQLQSSESGAQRRSLA 581 Query: 546 QLNYKSRVGSFSAGVSQGGAISSQRLGARGALAFMDGGVFASDWIDDSFAVVNASGVKNV 605 Q+NY+ R G A V + + L G+L MDG V I+D+FA+V G+ +V Sbjct: 582 QVNYRGRYGDAFAAVQEIDGHTGTALDMTGSLVLMDGAVLPGRRINDAFALVTTEGMADV 641 Query: 606 GIYTENRYAGRTDDNGQLLLTDLRAYDVNKISVDVLDLPLTLQLDQSDQYVKPRDRSGVI 665 + ENR GRT+ G LL+ DL AY+ N++++D L LP+ +L S V P DRSGV+ Sbjct: 642 PVTFENRLMGRTNAQGHLLVPDLVAYENNRVAIDPLVLPVNARLAASSTTVAPADRSGVL 701 Query: 666 VHFNARRASDVTLTLKDAAGNYLPIGASIRVRETGLQAPVGYDGVSYLQEL 716 V F+ L L DA G LP+G+ + TG + P+GYDG++++ L Sbjct: 702 VRFHVETFHGAQLRLVDAQGQPLPVGSHATLARTGARYPIGYDGLAFIDAL 752