BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0029.0282.p (136 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value D8IQY5.1 D8IQY5_HERSS Putative uncharacterized protein 273 7e-72 C3X6R0.1 C3X6R0_OXAFO Putative uncharacterized protein 120 8e-26 F1W4J9.1 F1W4J9_9BURK Putative transmembrane protein 119 1e-25 C3XCY8.1 C3XCY8_OXAFO Putative uncharacterized protein 113 9e-24 A6SZZ5.1 A6SZZ5_JANMA Uncharacterized conserved protein 105 2e-21 A4G4H4.1 A4G4H4_HERAR Putative uncharacterized protein 104 5e-21 B5WKJ5.1 B5WKJ5_9BURK Putative uncharacterized protein 91 6e-17 E5ASW4.1 E5ASW4_BURRH COG: DNA-directed RNA polymerase specializ... 91 7e-17 B2JDP3.1 B2JDP3_BURP8 Putative uncharacterized protein 89 2e-16 Q142J0.1 Q142J0_BURXL Putative membrane protein 89 2e-16 >D8IQY5.1 D8IQY5_HERSS Putative uncharacterized protein Length = 136 Score = 273 bits (697), Expect = 7e-72, Method: Compositional matrix adjust. Identities = 135/136 (99%), Positives = 136/136 (100%) Query: 1 MNNKEMQFAYKVKLALDANLDNLSDDTLQSLAAARRVALARKKQTPMTVRVEQPVLAGAF 60 MNNKEMQFAYKVKLALDANLDNLSDDTLQSLAAARRVALARKKQTPMTVRVEQPVLAGAF Sbjct: 1 MNNKEMQFAYKVKLALDANLDNLSDDTLQSLAAARRVALARKKQTPMTVRVEQPVLAGAF 60 Query: 61 GSAGGMLSPKSSWLGRLGVAAPLLAGIILFAGLYQHENAKRVSYLADIDAAVLSDELPLS 120 GSAGGMLSPK+SWLGRLGVAAPLLAGIILFAGLYQHENAKRVSYLADIDAAVLSDELPLS Sbjct: 61 GSAGGMLSPKASWLGRLGVAAPLLAGIILFAGLYQHENAKRVSYLADIDAAVLSDELPLS 120 Query: 121 AYLDHGFNAYLAEKEQ 136 AYLDHGFNAYLAEKEQ Sbjct: 121 AYLDHGFNAYLAEKEQ 136 >C3X6R0.1 C3X6R0_OXAFO Putative uncharacterized protein Length = 136 Score = 120 bits (300), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 61/135 (45%), Positives = 88/135 (65%), Gaps = 5/135 (3%) Query: 1 MNNKEMQFAYKVKLALDANLDNLSDDTLQSLAAARRVALARKKQT-PMTVRVEQPVLAGA 59 MN KE FAYKV+ AL+ L+++ + Q L AR VA++RKK+T P+ +V Q V AG Sbjct: 1 MNMKEENFAYKVRHALNEKLEDMPEHITQRLERARLVAVSRKKKTAPLYRKVFQQVFAGT 60 Query: 60 FGSAGGMLSPKSSWLGRLGVAAPLLAGIILFAGLYQHENAKRVSYLADIDAAVLSDELPL 119 G S +SW+G+LG+ P+L ++ AG++ HE +++ +ADID AVLSDELP Sbjct: 61 ----SGYFSDNTSWMGKLGLGFPILVLVVGMAGIFHHEQQRQIREIADIDIAVLSDELPP 116 Query: 120 SAYLDHGFNAYLAEK 134 SAY D GF AY+ ++ Sbjct: 117 SAYADSGFKAYVIDR 131 >F1W4J9.1 F1W4J9_9BURK Putative transmembrane protein Length = 134 Score = 119 bits (299), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 74/135 (54%), Positives = 92/135 (68%), Gaps = 4/135 (2%) Query: 1 MNNKEMQFAYKVKLALDANLDNLSDDTLQSLAAARRVALARKKQ-TPMTVRVEQPVLAGA 59 MN +E+ FAYKV+ AL+ NLDNL T LAAAR+ ALA K+Q +P+ Q V+AG Sbjct: 1 MNTRELNFAYKVRHALNENLDNLPVATTDRLAAARKKALAVKRQDSPLKALAAQHVMAG- 59 Query: 60 FGSAGGMLSPKSSWLGRLGVAAPLLAGIILFAGLYQHENAKRVSYLADIDAAVLSDELPL 119 A G SSW R+G+ PLLA + +G+YQ E +R+S ADIDAAVLSDELPL Sbjct: 60 --PAAGFFGNTSSWFNRVGLIIPLLALVAGLSGMYQFEKQQRISDTADIDAAVLSDELPL 117 Query: 120 SAYLDHGFNAYLAEK 134 SAYLDHGF+AYLA + Sbjct: 118 SAYLDHGFSAYLARQ 132 >C3XCY8.1 C3XCY8_OXAFO Putative uncharacterized protein Length = 134 Score = 113 bits (283), Expect = 9e-24, Method: Compositional matrix adjust. Identities = 59/135 (43%), Positives = 88/135 (65%), Gaps = 5/135 (3%) Query: 1 MNNKEMQFAYKVKLALDANLDNLSDDTLQSLAAARRVALARKKQT-PMTVRVEQPVLAGA 59 MN E FAYKV+ AL+ L++L ++ LA AR +A+ RKK++ P+ V + Q + AGA Sbjct: 1 MNMNEQDFAYKVRHALNERLEDLPENISARLADARSMAVKRKKKSRPLYVSLFQQMFAGA 60 Query: 60 FGSAGGMLSPKSSWLGRLGVAAPLLAGIILFAGLYQHENAKRVSYLADIDAAVLSDELPL 119 G +S W GRLG++ P+L ++ AG++ HE +++ +ADID AVLSDELP Sbjct: 61 SAGTSGHVS----WTGRLGLSLPILVLVVGMAGIFHHEQQRQIREIADIDIAVLSDELPP 116 Query: 120 SAYLDHGFNAYLAEK 134 SAY D+GF AY+ ++ Sbjct: 117 SAYADNGFRAYIVDR 131 >A6SZZ5.1 A6SZZ5_JANMA Uncharacterized conserved protein Length = 135 Score = 105 bits (262), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 60/140 (42%), Positives = 88/140 (62%), Gaps = 9/140 (6%) Query: 1 MNNKEMQFAYKVKLALDANLDNLSDDTLQSLAAARRVALARKKQTPMTVRVEQPVLAG-- 58 M KE+ AYK++ ALD + + +S +T + LA+AR +AL+RKKQ + P A Sbjct: 1 MKTKELDLAYKLRHALDESANQVSANTAERLASARNIALSRKKQG-----ITAPAFAAQP 55 Query: 59 AFGSAGGMLSP--KSSWLGRLGVAAPLLAGIILFAGLYQHENAKRVSYLADIDAAVLSDE 116 A S GG S + +WLGR+G+ PL A + G YQ E +++ A IDA VL+D+ Sbjct: 56 ALASYGGAPSSDHRWAWLGRMGLLVPLAALVFGLVGAYQFEQQQQIMDSASIDAEVLTDD 115 Query: 117 LPLSAYLDHGFNAYLAEKEQ 136 LP+SAYLDHGF+A+LA+ ++ Sbjct: 116 LPISAYLDHGFDAFLAKGDK 135 >A4G4H4.1 A4G4H4_HERAR Putative uncharacterized protein Length = 134 Score = 104 bits (259), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 57/136 (41%), Positives = 86/136 (63%), Gaps = 4/136 (2%) Query: 1 MNNKEMQFAYKVKLALDANLDNLSDDTLQSLAAARRVALARKK-QTPMTVRVEQPVLAGA 59 M KE+ AYK++ ALD + +NL + + LA+AR +AL+ KK ++ +V V++ LAG Sbjct: 1 MKTKELDLAYKLRHALDESSNNLPPNICERLASARNIALSHKKAESTASVVVQRTALAG- 59 Query: 60 FGSAGGMLSPKSSWLGRLGVAAPLLAGIILFAGLYQHENAKRVSYLADIDAAVLSDELPL 119 + SW+ R+G+A PL + G+YQ E +++ A IDAAVL+D+LP+ Sbjct: 60 --HPAPSTHNRFSWIARMGMAVPLAVLVFGLIGIYQFEQRQQIIESAAIDAAVLTDDLPI 117 Query: 120 SAYLDHGFNAYLAEKE 135 SAYLD GFNA+LA+ E Sbjct: 118 SAYLDSGFNAFLAKTE 133 >B5WKJ5.1 B5WKJ5_9BURK Putative uncharacterized protein Length = 143 Score = 90.9 bits (224), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 66/137 (48%), Positives = 88/137 (64%), Gaps = 5/137 (3%) Query: 1 MNNKEMQFAYKVKLALDANLDNLSDDTLQSLAAARRVALARKKQTPMTVRVEQPVLAG-A 59 + N E++FA +++ ALD N +LS T+ LAAARR ALARKK ++ V P AG Sbjct: 4 LENTELEFARQLRRALDENTASLSPATVDRLAAARRAALARKKPETVSAPVFVPAFAGMP 63 Query: 60 FGSAG---GMLSPKSSW-LGRLGVAAPLLAGIILFAGLYQHENAKRVSYLADIDAAVLSD 115 G AG G P+ W L R +A PL A ++ G+ E+ +R + LADIDAA+LSD Sbjct: 64 AGMAGLPQGGSEPRRRWPLRRFALAWPLAALVVSLIGIAYWEDHQRTAELADIDAAMLSD 123 Query: 116 ELPLSAYLDHGFNAYLA 132 +LPL+AYLDHGFNAYL+ Sbjct: 124 DLPLNAYLDHGFNAYLS 140 >E5ASW4.1 E5ASW4_BURRH COG: DNA-directed RNA polymerase specialized sigma subunit Length = 141 Score = 90.5 bits (223), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 65/136 (47%), Positives = 82/136 (60%), Gaps = 6/136 (4%) Query: 2 NNKEMQFAYKVKLALDANLDNLSDDTLQSLAAARRVALARKKQTPMTVRVEQPVLAGA-- 59 KE++FA KV+ ALD L T LAAAR+VALARKK T V P LAGA Sbjct: 6 ETKEIEFALKVRRALDERAARLPRATTDRLAAARQVALARKKPDTRTRPVYVPALAGAGN 65 Query: 60 --FGSAGGMLSPKSSWLGRLGVAAPLLAGIILFAGLYQHENAKRVSYLADIDAAVLSDEL 117 AGG ++ W RL + PLLA + A + EN + ++ +A IDAA+LSDEL Sbjct: 66 MPTTRAGGA-HKRARW-SRLALVWPLLALVCGLAAIRYWENQQHLADIAAIDAAMLSDEL 123 Query: 118 PLSAYLDHGFNAYLAE 133 PLSAY+DHGF+AYL+ Sbjct: 124 PLSAYVDHGFHAYLSR 139 >B2JDP3.1 B2JDP3_BURP8 Putative uncharacterized protein Length = 143 Score = 89.4 bits (220), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 65/135 (48%), Positives = 87/135 (64%), Gaps = 5/135 (3%) Query: 1 MNNKEMQFAYKVKLALDANLDNLSDDTLQSLAAARRVALARKKQTPMTVRVEQPVLAGAF 60 + KE++FA +++ ALD N + T LAAARR ALARKK + V PV GA Sbjct: 5 LETKELEFARQLRRALDENAARIPPATTDRLAAARRAALARKKPEAVQAPVFAPVFVGA- 63 Query: 61 GSAGGMLSPKSSW----LGRLGVAAPLLAGIILFAGLYQHENAKRVSYLADIDAAVLSDE 116 G+ + P+SS L +L +A P+LA +I AG+ E+ +R + LADIDAA+LSD+ Sbjct: 64 GTLAHLPQPESSRRLPRLRKLALAWPVLALVIGLAGIAWWEDHQRTAELADIDAAMLSDD 123 Query: 117 LPLSAYLDHGFNAYL 131 LPL+AYLDHGFNAYL Sbjct: 124 LPLNAYLDHGFNAYL 138 >Q142J0.1 Q142J0_BURXL Putative membrane protein Length = 142 Score = 89.4 bits (220), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 64/137 (46%), Positives = 87/137 (63%), Gaps = 6/137 (4%) Query: 1 MNNKEMQFAYKVKLALDANLDNLSDDTLQSLAAARRVALARKKQTPMTVRVEQPVLAGAF 60 + KE++FA +V+ ALD N ++ T+ LAAARR ALARKK ++ V P AGA Sbjct: 4 LETKELEFARQVRRALDENAASIPSATVDRLAAARRAALARKKPETVSAPVFVPAFAGA- 62 Query: 61 GSAGGMLS-----PKSSWLGRLGVAAPLLAGIILFAGLYQHENAKRVSYLADIDAAVLSD 115 G GM + S L R +A PL+A ++ G+ E+ +R + LADIDAA+LSD Sbjct: 63 GVPAGMPQVELPQRRRSPLRRFALAWPLVALVVSLVGIAYWEDQQRTAELADIDAAMLSD 122 Query: 116 ELPLSAYLDHGFNAYLA 132 +LPL+AYLDHGFNAYL+ Sbjct: 123 DLPLNAYLDHGFNAYLS 139