BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0029.0235.p (750 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value D8IQV9.1 D8IQV9_HERSS Signal transduction protein containing a m... 1528 0.0 E1MKX8.1 E1MKX8_9GAMM Diguanylate cyclase/phosphodiesterase with... 713 0.0 E1MQN8.1 E1MQN8_9GAMM Response regulator receiver modulated digu... 493 e-137 B2JUP6.1 B2JUP6_BURP8 Diguanylate cyclase/phosphodiesterase with... 475 e-131 E6QHF3.1 E6QHF3_9ZZZZ Putative uncharacterized protein 469 e-129 E2SU44.1 E2SU44_9RALS Sensory box protein/response regulator 465 e-128 D5CQ10.1 D5CQ10_SIDLE Diguanylate cyclase/phosphodiesterase with... 464 e-128 C6BM10.1 C6BM10_RALP1 Diguanylate cyclase/phosphodiesterase with... 463 e-128 B2UKB8.1 B2UKB8_RALPJ Diguanylate cyclase/phosphodiesterase with... 463 e-128 D5CPV3.1 D5CPV3_SIDLE Diguanylate cyclase/phosphodiesterase with... 462 e-127 >D8IQV9.1 D8IQV9_HERSS Signal transduction protein containing a membrane domain, an EAL and a GGDEF domain protein Length = 750 Score = 1528 bits (3957), Expect = 0.0, Method: Compositional matrix adjust. Identities = 748/750 (99%), Positives = 748/750 (99%) Query: 1 MNQDVLRDISEKYCGLLRAFLLSPEGNAASEQLQLAHHLGGSLVMGRIAPAELLGIHQAA 60 MNQDVLRDISEKYCGLLRAFLLSPEGNAASEQLQLAHHLGGSLVMGRIAPAELLGIHQAA Sbjct: 1 MNQDVLRDISEKYCGLLRAFLLSPEGNAASEQLQLAHHLGGSLVMGRIAPAELLGIHQAA 60 Query: 61 VESLANCCPALPLAQIGARLNMPLVTMYQAYESAFRERIAVRYQDLAASFFCASGEQELI 120 VESLANCCPAL LAQIGARLNMPLVTMYQAYESAFRERIAVRYQDLAASFFCASGEQELI Sbjct: 61 VESLANCCPALQLAQIGARLNMPLVTMYQAYESAFRERIAVRYQDLAASFFCASGEQELI 120 Query: 121 ARQIGDVFNDFNTHLGSIIGFAEMVEDELSRKSSGQQSLHLLMQNLTALLKAEHAIQQRI 180 ARQIGDVFNDFNTHLGSIIGFAEMVEDELSRKSSGQQSLHLLMQNLTALLKAEHAIQQRI Sbjct: 121 ARQIGDVFNDFNTHLGSIIGFAEMVEDELSRKSSGQQSLHLLMQNLTALLKAEHAIQQRI 180 Query: 181 RSSERQFRTLVDNSPDVILRYDMEGRCVFANPAFTRETGLMADQDINTILDRSANRRWDD 240 RSSERQFRTLVDNSPDVILRYDMEGRCVFANPAFTRETGLMADQDINTILDRSANRRWDD Sbjct: 181 RSSERQFRTLVDNSPDVILRYDMEGRCVFANPAFTRETGLMADQDINTILDRSANRRWDD 240 Query: 241 ESCSFGERVRQVAATGVADVVVLEWRHPQGHLVSHEMHIVPEYDADEQIFGTLAIGRDVT 300 ESCSFGERVRQVAATGVADVVVLEWRHPQGHLVSHEMHIVPEYDADEQIFGTLAIGRDVT Sbjct: 241 ESCSFGERVRQVAATGVADVVVLEWRHPQGHLVSHEMHIVPEYDADEQIFGTLAIGRDVT 300 Query: 301 RRKEVEFKLRHQANYDPLSGLPNRRLLGDMLQREVASAKKHAYPLAVVFIDLDRFKDVND 360 RRKEVEFKLRHQANYDPLSGLPNRRLLGDMLQREVASAKKHAYPLAVVFIDLDRFKDVND Sbjct: 301 RRKEVEFKLRHQANYDPLSGLPNRRLLGDMLQREVASAKKHAYPLAVVFIDLDRFKDVND 360 Query: 361 SLGHSVGDQLLVVAAQRVRASVREHDLVARLAGDEFVAVLPRLEASAALTRIGDDIVAAL 420 SLGHSVGDQLLVVAAQRVRASVREHDLVARLAGDEFVAVLPRLEASAALTRIGDDIVAAL Sbjct: 361 SLGHSVGDQLLVVAAQRVRASVREHDLVARLAGDEFVAVLPRLEASAALTRIGDDIVAAL 420 Query: 421 AEPFQLGEHRVRISASVGIAIYPHDADTVTTLIGCADQAMFAAKGGGRNGLAFFTEDMRE 480 AEPFQLGEHRVRISASVGIAIYPHDADTVTTLIGCADQAMFAAKGGGRNGLAFFTEDMRE Sbjct: 421 AEPFQLGEHRVRISASVGIAIYPHDADTVTTLIGCADQAMFAAKGGGRNGLAFFTEDMRE 480 Query: 481 KSFERRRLLNDLYDALQEGQFELHFQPALELQSGVIHKAEALVRWRHPAFGMISPDRFIP 540 KSFERRRLLNDLYDALQEGQFELHFQPALELQSGVIHKAEALVRWRHPAFGMISPDRFIP Sbjct: 481 KSFERRRLLNDLYDALQEGQFELHFQPALELQSGVIHKAEALVRWRHPAFGMISPDRFIP 540 Query: 541 LAEESGLIFDLGRWILQEAARVSVRWNAQGTSPFRKQISVNLSPVQFLNGHYDAIVMDQL 600 LAEESGLIFDLGRWILQEAARVSVRWNAQGTSPFRKQISVNLSPVQFLNGHYDAIVMDQL Sbjct: 541 LAEESGLIFDLGRWILQEAARVSVRWNAQGTSPFRKQISVNLSPVQFLNGHYDAIVMDQL 600 Query: 601 SLQGCQPDLIAIEITEGLLLDDSEAVRSQLNNLRAAGIQVALDDFGTGYSAMSYLKKFSM 660 SLQGCQP LIAIEITEGLLLDDSEAVRSQLNNLRAAGIQVALDDFGTGYSAMSYLKKFSM Sbjct: 601 SLQGCQPGLIAIEITEGLLLDDSEAVRSQLNNLRAAGIQVALDDFGTGYSAMSYLKKFSM 660 Query: 661 DYLKIDRSFVQDMVDADSNKAIVEAIIVMAHRLGMKVIAEGVETMVQAQLLRDAGCEYVQ 720 DYLKIDRSFVQDMVDADSNKAIVEAIIVMAHRLGMKVIAEGVETMVQAQLLRDAGCEYVQ Sbjct: 661 DYLKIDRSFVQDMVDADSNKAIVEAIIVMAHRLGMKVIAEGVETMVQAQLLRDAGCEYVQ 720 Query: 721 GYLYSRPLPEDDFLNFAASAHSPADAAAAR 750 GYLYSRPLPEDDFLNFAASAHSPADAAAAR Sbjct: 721 GYLYSRPLPEDDFLNFAASAHSPADAAAAR 750 >E1MKX8.1 E1MKX8_9GAMM Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) Length = 751 Score = 713 bits (1841), Expect = 0.0, Method: Compositional matrix adjust. Identities = 370/745 (49%), Positives = 496/745 (66%), Gaps = 6/745 (0%) Query: 1 MNQDVLRDISEKYCGLLRAFLLSPEGNAASEQLQLAHHLGGSLVMGRIAPAELLGIHQAA 60 M QDV E+Y +L+ + + +A L A L V + P E+ +H A Sbjct: 1 MKQDV-----ERYFHILQQVAFAADADAIEVHLAEAFELSRIWVDRGVPPDEVTLLHHDA 55 Query: 61 VESLANCCPALPLAQIGARLNMPLVTMYQAYESAFRERIAVRYQDLAASFFCASGEQELI 120 + L+ P L AQ+ RL PL+ M AY AFRE++ RYQ + S S E + Sbjct: 56 MVRLSTAHPELIFAQVADRLTRPLMEMSMAYGMAFREQMEQRYQAIVNSRLKQSHSLESV 115 Query: 121 ARQIGDVFNDFNTHLGSIIGFAEMVEDELSRKSSGQQSLHLLMQNLTALLKAEHAIQQRI 180 + + +DFN LG+I GFAE+ D+L SS + ++ N+ LL AE A+ + I Sbjct: 116 GKLAAGIAHDFNNLLGNIGGFAEIAADKLMPGSSAGDDFNNMVDNINTLLTAEQAMLEEI 175 Query: 181 RSSERQFRTLVDNSPDVILRYDMEGRCVFANPAFTRETGLMADQDINTILDRSANRRWDD 240 +ER+FR+LV+NSPD+I+RYD + R VF NPA+ RET A+ +N D + R Sbjct: 176 ALNERRFRSLVENSPDIIVRYDRDCRRVFVNPAYIRETDTPAELVLNKSTDDANVWRPSM 235 Query: 241 ESCSFGERVRQVAATGVADVVVLEWRHPQGHLVSHEMHIVPEYDADEQIFGTLAIGRDVT 300 + +R++QV TGV D ++LEW VSHEM++V EYDAD + GTLAIGRDVT Sbjct: 236 PREEYRKRLQQVMDTGVTDQILLEWVRQDAQRVSHEMYVVAEYDADGDVIGTLAIGRDVT 295 Query: 301 RRKEVEFKLRHQANYDPLSGLPNRRLLGDMLQREVASAKKHAYPLAVVFIDLDRFKDVND 360 R KE E +L HQA+YD L+GLPNRRL GD L ++VA AK++ + LAV+FIDLDRFK+VND Sbjct: 296 RSKEAERQLLHQASYDILTGLPNRRLFGDRLGKDVAKAKRNDFGLAVLFIDLDRFKEVND 355 Query: 361 SLGHSVGDQLLVVAAQRVRASVREHDLVARLAGDEFVAVLPRLEASAALTRIGDDIVAAL 420 +LGH+VGD LL AAQR+ + VRE D VAR AGDEFV +LP + S AL RI +IV + Sbjct: 356 TLGHAVGDLLLKKAAQRICSCVRESDTVARFAGDEFVVILPEVGESGALQRIAQNIVGVM 415 Query: 421 AEPFQLGEHRVRISASVGIAIYPHDADTVTTLIGCADQAMFAAKGGGRNGLAFFTEDMRE 480 A+ F GEH +SAS+GIAI+P D D TL+GCADQAM++AK GRN FF M E Sbjct: 416 AQSFTFGEHSAYVSASIGIAIFPQDGDNADTLVGCADQAMYSAKKTGRNNFCFFNRQMLE 475 Query: 481 KSFERRRLLNDLYDALQEGQFELHFQPALELQSGVIHKAEALVRWRHPAFGMISPDRFIP 540 + +R +L NDL+DAL +GQ E+ +QP +++ SG + KAEAL+RWRHP +GM+ PDRFIP Sbjct: 476 LAHQRMQLGNDLHDALGKGQLEVFYQPIIDVVSGRVVKAEALLRWRHPEWGMVPPDRFIP 535 Query: 541 LAEESGLIFDLGRWILQEAARVSVRWNAQGTSPFRKQISVNLSPVQFLNGHYDAIVMDQL 600 +AEE+ LI ++G W+ +EAA RWNA + ++QISVN+SP QF G + I+++ + Sbjct: 536 IAEETDLIQEIGAWVFREAADTVKRWNALSANQGQRQISVNMSPRQFTRGRGEQIIINYM 595 Query: 601 SLQGCQPDLIAIEITEGLLLDDSEAVRSQLNNLRAAGIQVALDDFGTGYSAMSYLKKFSM 660 G P IA+EITEGLLLD+ V +L LRAAGI+++LDDFGTGYSAM+YLK+F++ Sbjct: 596 QAYGLDPAHIAVEITEGLLLDNCPGVTQKLEKLRAAGIEISLDDFGTGYSAMAYLKRFNI 655 Query: 661 DYLKIDRSFVQDMVDADSNKAIVEAIIVMAHRLGMKVIAEGVETMVQAQLLRDAGCEYVQ 720 DYLKID+SFV+D+ ++AI EAI+VMAHRLG+KVIAEGVET Q LL +AGCEYVQ Sbjct: 656 DYLKIDQSFVRDLETDPGDRAIAEAIVVMAHRLGLKVIAEGVETEGQYALLAEAGCEYVQ 715 Query: 721 GYLYSRPLPEDDFLNFA-ASAHSPA 744 GYL+++P+P + FL F A A PA Sbjct: 716 GYLFAKPMPVEAFLAFVNADAQKPA 740 >E1MQN8.1 E1MQN8_9GAMM Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) Length = 1572 Score = 493 bits (1270), Expect = e-137, Method: Compositional matrix adjust. Identities = 244/437 (55%), Positives = 307/437 (70%) Query: 302 RKEVEFKLRHQANYDPLSGLPNRRLLGDMLQREVASAKKHAYPLAVVFIDLDRFKDVNDS 361 RK +E ++ QA+YD L+GLPNRRL G+ L+ E+ A++ AY LAV+FIDLDRFK+VND+ Sbjct: 1135 RKRIEQQMYRQASYDQLTGLPNRRLFGNRLREEIVKAERGAYSLAVLFIDLDRFKEVNDT 1194 Query: 362 LGHSVGDQLLVVAAQRVRASVREHDLVARLAGDEFVAVLPRLEASAALTRIGDDIVAALA 421 LGH GD LLV AAQR+R VRE D VARL GDEFV +LP+++ R+ IV A+ Sbjct: 1195 LGHDAGDDLLVEAAQRIRLCVRESDTVARLGGDEFVVILPKVDEIVPQDRVAQCIVDAMV 1254 Query: 422 EPFQLGEHRVRISASVGIAIYPHDADTVTTLIGCADQAMFAAKGGGRNGLAFFTEDMREK 481 PF LGE +SAS+GIA YP DAD LIGCADQAM+ AK GRN +FFT M E+ Sbjct: 1255 RPFLLGEQNAYVSASIGIAGYPQDADNAEVLIGCADQAMYVAKSMGRNCFSFFTHGMLEQ 1314 Query: 482 SFERRRLLNDLYDALQEGQFELHFQPALELQSGVIHKAEALVRWRHPAFGMISPDRFIPL 541 + R L+NDL AL GQ E+++QP +E+ SG KAEAL+RW HP GM+ PDRFIP+ Sbjct: 1315 ARHRLELVNDLRGALDAGQLEVYYQPIIEVVSGKAVKAEALLRWHHPELGMVPPDRFIPI 1374 Query: 542 AEESGLIFDLGRWILQEAARVSVRWNAQGTSPFRKQISVNLSPVQFLNGHYDAIVMDQLS 601 AEE+ LI ++G W+ +EAA + RW+ QISVN+SP QF +D L Sbjct: 1375 AEETDLIQEIGAWVFREAADTAKRWHGLSEEDGVGQISVNMSPRQFTKDSGVQTFIDYLQ 1434 Query: 602 LQGCQPDLIAIEITEGLLLDDSEAVRSQLNNLRAAGIQVALDDFGTGYSAMSYLKKFSMD 661 P + +EITEGLLLDD AV +L LRAAGIQ++LDDFGTGYSAM+YLKKF++D Sbjct: 1435 EAAIDPSYLVVEITEGLLLDDCSAVTEKLELLRAAGIQLSLDDFGTGYSAMAYLKKFNID 1494 Query: 662 YLKIDRSFVQDMVDADSNKAIVEAIIVMAHRLGMKVIAEGVETMVQAQLLRDAGCEYVQG 721 YLKIDRSFV+D+ ++AI EAI+VMAHRLG+KVIAEGVET Q LL GCEYVQG Sbjct: 1495 YLKIDRSFVRDLETDPGDRAIAEAIVVMAHRLGLKVIAEGVETEGQRALLMAVGCEYVQG 1554 Query: 722 YLYSRPLPEDDFLNFAA 738 YLY++P+P + FL + A Sbjct: 1555 YLYAKPMPVEAFLAYVA 1571 Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 48/143 (33%), Positives = 80/143 (55%), Gaps = 5/143 (3%) Query: 162 LMQNLTALLKAEHAIQQRIRSSERQFRTLVDNSPDVILRYDMEGRCVFANPAFTRETGLM 221 + +++T +AE+ QR ER+ RTLV+N P +++RYD + ++ NPA+++ G Sbjct: 831 IARDITERKQAENLRHQR----ERELRTLVENLPTMVVRYDRNFQRIYVNPAYSQIIGRT 886 Query: 222 ADQDINTILDRSANRRWDDESCSFGERVRQVAATGVADVVVLEWRHPQGHLVSHEMHIVP 281 + + L +S R + + S+ + V +G V LEW G L+SH M IVP Sbjct: 887 EAEMFGSPLKKSW-RATNISAESYQAILSGVMRSGKKAEVSLEWTDGDGRLISHVMKIVP 945 Query: 282 EYDADEQIFGTLAIGRDVTRRKE 304 E DAD +I LA+G D++ R++ Sbjct: 946 ECDADGKIDSVLALGFDLSDRRQ 968 Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 52/152 (34%), Positives = 80/152 (52%), Gaps = 8/152 (5%) Query: 162 LMQNLTALLKAEHAIQQRIRSSERQFRTLVDNSPDVILRYDMEGRCVFANPAFTRETGLM 221 L++++T + E ++QR E +FR LV+NSPD I RYD + R ++ANPA + G Sbjct: 703 LVRDITERKQMETELRQR----ELEFRVLVENSPDPIFRYDRDCRRIYANPAVEKLVGCP 758 Query: 222 ADQDINTI-LDRSANRRWDDESCSFGERVRQVAATGVADVVVLEWRHPQGHLVSHEMHIV 280 A Q IN + D S ++ E + +RQV TG+ +E+ G Sbjct: 759 ASQLINRMPSDASVVSAYEGE--KLVQAIRQVLETGLTAESEVEFIADDGQRHYFHNRYA 816 Query: 281 PEYDADEQIFGTLAIGRDVTRRKEVEFKLRHQ 312 PE+ ++ G ++I RD+T RK+ E LRHQ Sbjct: 817 PEFGPQGEVAGVISIARDITERKQAE-NLRHQ 847 >B2JUP6.1 B2JUP6_BURP8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) Length = 980 Score = 475 bits (1222), Expect = e-131, Method: Compositional matrix adjust. Identities = 246/554 (44%), Positives = 354/554 (63%), Gaps = 8/554 (1%) Query: 182 SSERQFRTLVDNSPDVILRYDMEGRCVFANPAFTRETGLMADQDINTILDRSANRRWDDE 241 S E + RTL++NSPD I RYD + R +ANPAF G + + R + Sbjct: 418 SRELESRTLIENSPDTITRYDRDLRRTYANPAFCSSAGRSLGEALGK---RPSEIPGGAN 474 Query: 242 SCSFGERVRQVAATGVADVVVLEWRHPQGHLVSHEMHIVPEYDADEQIFGTLAIGRDVTR 301 + + ++ +V A+G + L W G + + PE D ++ LA+GRD++ Sbjct: 475 ALIYERKIGEVIASGKSGQFELRWLSKDGQEQCSHIRLTPEIDPSGKVNSVLAVGRDLSD 534 Query: 302 RKEVEFKLRHQANYDPLSGLPNRRLLGDMLQREVASAKKHAYPLAVVFIDLDRFKDVNDS 361 R E + QAN+D L+ LPNR++ + L++E A++ + +A++ IDLDRFK+VNDS Sbjct: 535 RMAFEAAIWQQANFDTLTQLPNRQMFQNRLEQEAKVAQRSGHRMALMLIDLDRFKEVNDS 594 Query: 362 LGHSVGDQLLVVAAQRVRASVREHDLVARLAGDEFVAVLPRLEASAALTRIGDDIVAALA 421 LGH GD LL+ AA+R+ + VRE D VARL GDEF +LP ++ ++ RI I+ L+ Sbjct: 595 LGHDTGDTLLIEAARRITSCVRESDTVARLGGDEFTVILPDIDNCGSIERIARTIIETLS 654 Query: 422 EPFQLGEHRVRISASVGIAIYPHDADTVTTLIGCADQAMFAAKGGGRNGLAFFTEDMREK 481 EPF LG ISAS+G+ +YP DA + L ADQAM+AAK GRN L +FT D++ Sbjct: 655 EPFALGPDEAFISASIGVTVYPDDARELDVLFKNADQAMYAAKNAGRNRLNYFTPDLQVA 714 Query: 482 SFERRRLLNDLYDALQEGQFELHFQPALELQSGVIHKAEALVRWRHPAFGMISPDRFIPL 541 + +R RL +DL AL QF L++QP ++L +G I KAEAL+RW HP GM+SP FIPL Sbjct: 715 AEKRLRLTSDLRTALPHDQFRLYYQPIVDLSTGDIFKAEALIRWLHPERGMVSPLDFIPL 774 Query: 542 AEESGLIFDLGRWILQEAARVSVRWNAQGTSPFRKQISVNLSPVQFL-NGHYDAIVMDQL 600 AE++GLI +G W+ ++A + + W + F QISVN+SPVQ + A+ D L Sbjct: 775 AEDTGLIVPIGEWVFRQAVQQAKLWRQRFHPSF--QISVNMSPVQIRQDNQLGALWSDYL 832 Query: 601 SLQGCQPDLIAIEITEGLLLDDSEAVRSQLNNLRAAGIQVALDDFGTGYSAMSYLKKFSM 660 + +G IAIEITEGLLL + ++L R AGI++++DDFGTGYS+++YLK+F + Sbjct: 833 TREGMPGQSIAIEITEGLLLHADLNIDARLATFRHAGIRISIDDFGTGYSSLAYLKRFDI 892 Query: 661 DYLKIDRSFVQDM-VDADSNKAIVEAIIVMAHRLGMKVIAEGVETMVQAQLLRDAGCEYV 719 D+LKIDRSFVQ++ DAD N+A+ EA++V+AH+LG+KVIAEGVET+ Q L GC++ Sbjct: 893 DFLKIDRSFVQNLGFDAD-NQALCEAMVVLAHKLGLKVIAEGVETVEQRDFLTAVGCDFA 951 Query: 720 QGYLYSRPLPEDDF 733 QG+LYS+P+P D F Sbjct: 952 QGFLYSQPVPPDQF 965 >E6QHF3.1 E6QHF3_9ZZZZ Putative uncharacterized protein Length = 1182 Score = 469 bits (1206), Expect = e-129, Method: Compositional matrix adjust. Identities = 259/542 (47%), Positives = 349/542 (64%), Gaps = 7/542 (1%) Query: 193 NSPDVILRYDMEGRCVFANPAFTRETGLMADQDINTILDRSANRRWDDESCSFGERVRQV 252 N+ + ++ D E R + NPAFT+ TG D+ + ++ R D + R++ Sbjct: 638 NTSEAMMVTDEENRIIAINPAFTQITGYGMDEVLGRNPGMLSSGRHDADFYKI--LWREI 695 Query: 253 AATGVADVVVLEWRHPQGHLVSHEMHIVPEYDADEQIFGTLAIGRDVTRRKEVEFKLRHQ 312 +TG+ + R G + + I + D +A+ D+T + + + Q Sbjct: 696 ESTGIWQGEIWN-RRKNGEIYPEWLTINTILNDDGSTHRYVALFSDITDKVRTDELIWRQ 754 Query: 313 ANYDPLSGLPNRRLLGDMLQREVASAKKHAYPLAVVFIDLDRFKDVNDSLGHSVGDQLLV 372 AN+D L+GLPNRR+ D L+REV A + LA++FIDLDRFK+VND+LGH GD LLV Sbjct: 755 ANFDLLTGLPNRRMFYDRLEREVKKAHRGNLMLALLFIDLDRFKEVNDTLGHQTGDILLV 814 Query: 373 VAAQRVRASVREHDLVARLAGDEFVAVLPRLEASAALTRIGDDIVAALAEPFQLGEHRVR 432 AA+R+ + VRE D VARL GDEF +L L + + +I +I+A LA+PF LG+ Sbjct: 815 EAARRIVSCVRESDTVARLGGDEFTVILSELPDTNHVQKIAQNIIAKLADPFVLGDEMAY 874 Query: 433 ISASVGIAIYPHDADTVTTLIGCADQAMFAAKGGGRNGLAFFTEDMREKSFERRRLLNDL 492 +SASVGI YP+DA V L+ ADQAM+ AK GRN L++FT M+EK+ R RLLNDL Sbjct: 875 VSASVGITFYPNDALEVEQLLRNADQAMYVAKNAGRNRLSYFTNAMQEKAQSRLRLLNDL 934 Query: 493 YDALQEGQFELHFQPALELQSGVIHKAEALVRWRHPAFGMISPDRFIPLAEESGLIFDLG 552 AL GQF LHFQP ++L SG I KAEAL+RW+HP GM+SP FI LAEE+GLI D+G Sbjct: 935 RGALAAGQFLLHFQPIVDLSSGNIRKAEALLRWQHPQRGMVSPLEFITLAEETGLIVDIG 994 Query: 553 RWILQEAARVSVRWNAQGTSPFRKQISVNLSPVQFLN-GHYDAIVMDQLSLQGCQPDLIA 611 W+ +EAAR + RW S F Q+SVN SPVQF + A +D L + Sbjct: 995 DWVFREAARWANRW-VDICSDF--QVSVNGSPVQFQSEAGGIAPWLDHLQALDLSGQNVV 1051 Query: 612 IEITEGLLLDDSEAVRSQLNNLRAAGIQVALDDFGTGYSAMSYLKKFSMDYLKIDRSFVQ 671 IEITE +LL+ + +L + R AGIQVA+DDFGTGYS++SYLKKF +DYLKID+SF++ Sbjct: 1052 IEITESMLLNADSGITDKLIHFRDAGIQVAIDDFGTGYSSLSYLKKFDIDYLKIDQSFIR 1111 Query: 672 DMVDADSNKAIVEAIIVMAHRLGMKVIAEGVETMVQAQLLRDAGCEYVQGYLYSRPLPED 731 D+ S+ A+ EAIIVMAH+LG+KVIAEGVETM Q +LL++AGC+Y QGYL+SRPLP Sbjct: 1112 DLATDPSDMALSEAIIVMAHKLGLKVIAEGVETMDQKRLLQEAGCDYGQGYLFSRPLPSS 1171 Query: 732 DF 733 +F Sbjct: 1172 EF 1173 >E2SU44.1 E2SU44_9RALS Sensory box protein/response regulator Length = 864 Score = 465 bits (1196), Expect = e-128, Method: Compositional matrix adjust. Identities = 244/570 (42%), Positives = 353/570 (61%), Gaps = 8/570 (1%) Query: 182 SSERQFRTLVDNSPDVILRYDMEGRCVFANPAFTRETGLMADQDINTILDRSANRRWDDE 241 + ER+ RTL++NSPD I RYD E R ++ANPAF G + + R + D Sbjct: 300 TRERESRTLIENSPDTIARYDRESRRIYANPAFCALAGCSLTEALGK---RPSELPGGDN 356 Query: 242 SCSFGERVRQVAATGVADVVVLEWRHPQGHLVSHEMHIVPEYDADEQIFGTLAIGRDVTR 301 + + + + V ++G + L W G + + PE D + LA+GRD++ Sbjct: 357 ARVYEKIISDVISSGTSAQFELRWAGKDGQEQCSHVRLTPETDQAGNVHSVLAVGRDLSD 416 Query: 302 RKEVEFKLRHQANYDPLSGLPNRRLLGDMLQREVASAKKHAYPLAVVFIDLDRFKDVNDS 361 R E + QAN+D L+GLPNR++ + L +E + + +A++ IDLDRFK+VNDS Sbjct: 417 RMAFEATIWKQANFDALTGLPNRQMFHERLAQEASEPGRIGRRMALMLIDLDRFKEVNDS 476 Query: 362 LGHSVGDQLLVVAAQRVRASVREHDLVARLAGDEFVAVLPRLEASAALTRIGDDIVAALA 421 LGH GD LL+ A +R+ + VR+ D VARL GDEF +LP ++ + ++ RI I+ LA Sbjct: 477 LGHDRGDTLLIEAGKRIGSCVRQSDTVARLGGDEFTVILPNVDDAESVERIARTIIGKLA 536 Query: 422 EPFQLGEHRVRISASVGIAIYPHDADTVTTLIGCADQAMFAAKGGGRNGLAFFTEDMREK 481 EPF+LG ISASVG+ YP DA + L ADQAM+AAK GRN ++F DM+ + Sbjct: 537 EPFKLGADEAFISASVGVTFYPDDAHDLDVLFKNADQAMYAAKNAGRNRFSYFKPDMQVE 596 Query: 482 SFERRRLLNDLYDALQEGQFELHFQPALELQSGVIHKAEALVRWRHPAFGMISPDRFIPL 541 + +R RL +DL AL GQF++++QP +EL +G + KAEAL+RW HP G ISP FI + Sbjct: 597 AEQRLRLTSDLRTALPSGQFQVYYQPIVELATGEVCKAEALIRWLHPERGTISPHDFISV 656 Query: 542 AEESGLIFDLGRWILQEAARVSVRWNAQGTSPFRKQISVNLSPVQFL-NGHYDAIVMDQL 600 AE++GLI +G W+ ++A R + +W + F QISVN+SPVQ +G A D L Sbjct: 657 AEDTGLIVPIGDWVFKQAVRQARQWRDRFHPSF--QISVNMSPVQMRQDGQLCARWPDFL 714 Query: 601 SLQGCQPDLIAIEITEGLLLDDSEAVRSQLNNLRAAGIQVALDDFGTGYSAMSYLKKFSM 660 + +G + +EITEGLLL L LR+AGI +++DDFGTGYS+++YLK+F + Sbjct: 715 AREGLPAQSVMVEITEGLLLQAESRTDETLLTLRSAGIGISIDDFGTGYSSLAYLKRFDI 774 Query: 661 DYLKIDRSFVQDMVDADSNKAIVEAIIVMAHRLGMKVIAEGVETMVQAQLLRDAGCEYVQ 720 DYLKIDRSFV ++ + N+A+ EA++V+AH+LG+KVIAEGVET Q L+ C++ Q Sbjct: 775 DYLKIDRSFVHNLSFDEDNQALCEAMVVLAHKLGLKVIAEGVETAEQRDFLKAVDCDFAQ 834 Query: 721 GYLYSRPLPEDDFLN--FAASAHSPADAAA 748 G+LYS P+P +F + S ADA+A Sbjct: 835 GFLYSTPVPPHEFERRVWPMSEKRAADASA 864 >D5CQ10.1 D5CQ10_SIDLE Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) Length = 830 Score = 464 bits (1194), Expect = e-128, Method: Compositional matrix adjust. Identities = 227/445 (51%), Positives = 304/445 (68%), Gaps = 3/445 (0%) Query: 290 FGTLAIGRDVTRRKEVEFKLRHQANYDPLSGLPNRRLLGDMLQREVASAKKHAYPLAVVF 349 + + +D+T +K E + QAN+DPL+GLPNRR+ D L+ E+ + + PLA++F Sbjct: 377 YKLTGVSQDITEKKRSEETIWQQANFDPLTGLPNRRMFQDRLEHEIKKSNREGLPLALMF 436 Query: 350 IDLDRFKDVNDSLGHSVGDQLLVVAAQRVRASVREHDLVARLAGDEFVAVLPRLEASAAL 409 IDLD+FK+VND+LGH GD LLV AAQR+ VRE D VARL GDEF +L L+ + ++ Sbjct: 437 IDLDKFKEVNDTLGHDKGDILLVEAAQRISGCVRESDTVARLGGDEFTVILSELDDANSI 496 Query: 410 TRIGDDIVAALAEPFQLGEHRVRISASVGIAIYPHDADTVTTLIGCADQAMFAAKGGGRN 469 RI I+ AL PF L E +SAS+GI +YP+DA + L+ ADQAM+A+K GRN Sbjct: 497 ERIAQAIIQALVAPFLLAEEVAFVSASIGITLYPNDAPNLELLMSNADQAMYASKSAGRN 556 Query: 470 GLAFFTEDMREKSFERRRLLNDLYDALQEGQFELHFQPALELQSGVIHKAEALVRWRHPA 529 ++FT M+ + R L+NDL DAL QF LH+ P +EL SG IHKAEAL+RW HP Sbjct: 557 RFSYFTPSMQAAALNRMHLINDLRDALSRNQFRLHYHPIVELSSGNIHKAEALIRWDHPV 616 Query: 530 FGMISPDRFIPLAEESGLIFDLGRWILQEAARVSVRWNAQGTSPFRKQISVNLSPVQFLN 589 G+I+P F+ LAEESG+I ++G W+ +E+ R +R + F QISVN SP+QF N Sbjct: 617 RGLINPAEFVALAEESGMIVEIGDWVFRESVRQVLRLREEHHPEF--QISVNKSPIQFRN 674 Query: 590 -GHYDAIVMDQLSLQGCQPDLIAIEITEGLLLDDSEAVRSQLNNLRAAGIQVALDDFGTG 648 Y + L G + I IEITEGLLLD +E+V+++L +LR AGIQVALDDFGTG Sbjct: 675 DDRYFRDWLPHLQQLGLPGECITIEITEGLLLDATESVQAKLLDLRDAGIQVALDDFGTG 734 Query: 649 YSAMSYLKKFSMDYLKIDRSFVQDMVDADSNKAIVEAIIVMAHRLGMKVIAEGVETMVQA 708 YS++SYLKKF +DY+KIDRSFV+++ + + EAIIVMAH+LG+KVIAEG+ET Q Sbjct: 735 YSSLSYLKKFDIDYIKIDRSFVRNLTATSDDMVLCEAIIVMAHKLGLKVIAEGIETATQR 794 Query: 709 QLLRDAGCEYVQGYLYSRPLPEDDF 733 LL AGC+Y QG+ +SRPLP +F Sbjct: 795 HLLTAAGCDYGQGHFFSRPLPSHEF 819 >C6BM10.1 C6BM10_RALP1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) Length = 980 Score = 463 bits (1192), Expect = e-128, Method: Compositional matrix adjust. Identities = 255/642 (39%), Positives = 381/642 (59%), Gaps = 18/642 (2%) Query: 120 IARQIGDVFNDFNTHL--GSIIGFAEMVEDELSRKSSGQQSL-HLLMQNLTALLKAEHAI 176 + R++ D +D + G + +DELSR + + + + Q + + + ++ Sbjct: 344 LVRKVHDTGDDAGAQVDEGKHVEAGARAKDELSRLAQRFERMREAIKQKIEKINEINASL 403 Query: 177 QQRI-------RSSERQFRTLVDNSPDVILRYDMEGRCVFANPAFTRETGLMADQDINTI 229 +Q + + ER+ RTL++NSPD I RYD E R ++ANPAF G + + Sbjct: 404 EQTVIERTAELVTRERESRTLIENSPDTISRYDRESRRIYANPAFCASAGCSLTEALGK- 462 Query: 230 LDRSANRRWDDESCSFGERVRQVAATGVADVVVLEWRHPQGHLVSHEMHIVPEYDADEQI 289 R + D + + + + V ++G + L W G + + PE D + Sbjct: 463 --RPSELPGGDNARVYEKIISDVISSGTSAQFELRWAGKDGQEQCSHVRLTPETDLAGNV 520 Query: 290 FGTLAIGRDVTRRKEVEFKLRHQANYDPLSGLPNRRLLGDMLQREVASAKKHAYPLAVVF 349 LA+GRD++ R E + QAN+D L+GLPNR++ + L +E + + +A++ Sbjct: 521 LSVLAVGRDLSDRMAFEATIWKQANFDALTGLPNRQMFHERLAQEASQPGRIGRRMALML 580 Query: 350 IDLDRFKDVNDSLGHSVGDQLLVVAAQRVRASVREHDLVARLAGDEFVAVLPRLEASAAL 409 IDLDRFK+VNDSLGH GD LL+ A +R+ A VR+ D VARL GDEF +LP L+ + ++ Sbjct: 581 IDLDRFKEVNDSLGHDRGDTLLIEAGKRIGACVRQSDTVARLGGDEFTVILPNLDDAESV 640 Query: 410 TRIGDDIVAALAEPFQLGEHRVRISASVGIAIYPHDADTVTTLIGCADQAMFAAKGGGRN 469 RI I+ LAEPF+LG +SASVG+ YP DA + L ADQAM+AAK GRN Sbjct: 641 ERIASTIIDKLAEPFKLGTDEAFVSASVGVTFYPDDAHDLDVLFKNADQAMYAAKNAGRN 700 Query: 470 GLAFFTEDMREKSFERRRLLNDLYDALQEGQFELHFQPALELQSGVIHKAEALVRWRHPA 529 ++F DM+ ++ +R RL +DL AL GQF++++QP +EL +G + KAEAL+RW HP Sbjct: 701 RFSYFKPDMQVEAEKRLRLTSDLRVALPSGQFQVYYQPIVELATGEVCKAEALIRWLHPE 760 Query: 530 FGMISPDRFIPLAEESGLIFDLGRWILQEAARVSVRWNAQGTSPFRKQISVNLSPVQFL- 588 G ISP FI +AE++GLI +G W+ ++A + + +W Q F QISVN+SPVQ Sbjct: 761 RGTISPHDFISVAEDTGLIVSIGDWVFKQAVQQARQWRDQFHPSF--QISVNMSPVQMRQ 818 Query: 589 NGHYDAIVMDQLSLQGCQPDLIAIEITEGLLLDDSEAVRSQLNNLRAAGIQVALDDFGTG 648 +G A D L+ +G + +EITEGLLL L LR+AGI +++DDFGTG Sbjct: 819 DGQLCARWSDFLAREGLPVQSVMVEITEGLLLQAESRTDETLLALRSAGIGISIDDFGTG 878 Query: 649 YSAMSYLKKFSMDYLKIDRSFVQDMVDADSNKAIVEAIIVMAHRLGMKVIAEGVETMVQA 708 YS++SYL++F +DYLKIDRSFV ++ + N+A+ EA++V+AH+LG+KVIAEGVET Q Sbjct: 879 YSSLSYLQRFDIDYLKIDRSFVHNLSFDEDNQALCEAMVVLAHKLGLKVIAEGVETAEQR 938 Query: 709 QLLRDAGCEYVQGYLYSRPLPEDDFLN--FAASAHSPADAAA 748 L+ C++ QG+LYS P+ +F + S ADA+A Sbjct: 939 DFLKAVDCDFAQGFLYSTPVLPHEFERRVWPMSERRAADASA 980 >B2UKB8.1 B2UKB8_RALPJ Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) Length = 980 Score = 463 bits (1192), Expect = e-128, Method: Compositional matrix adjust. Identities = 255/642 (39%), Positives = 381/642 (59%), Gaps = 18/642 (2%) Query: 120 IARQIGDVFNDFNTHL--GSIIGFAEMVEDELSRKSSGQQSL-HLLMQNLTALLKAEHAI 176 + R++ D +D + G + +DELSR + + + + Q + + + ++ Sbjct: 344 LVRKVHDTGDDAGAQVDEGKHVEAGARAKDELSRLAQRFERMREAIKQKIEKINEINASL 403 Query: 177 QQRI-------RSSERQFRTLVDNSPDVILRYDMEGRCVFANPAFTRETGLMADQDINTI 229 +Q + + ER+ RTL++NSPD I RYD E R ++ANPAF G + + Sbjct: 404 EQTVIERTAELVTRERESRTLIENSPDTISRYDRESRRIYANPAFCASAGCSLTEALGK- 462 Query: 230 LDRSANRRWDDESCSFGERVRQVAATGVADVVVLEWRHPQGHLVSHEMHIVPEYDADEQI 289 R + D + + + + V ++G + L W G + + PE D + Sbjct: 463 --RPSELPGGDNARVYEKIISDVISSGTSAQFELRWAGKDGQEQCSHVRLTPETDLAGNV 520 Query: 290 FGTLAIGRDVTRRKEVEFKLRHQANYDPLSGLPNRRLLGDMLQREVASAKKHAYPLAVVF 349 LA+GRD++ R E + QAN+D L+GLPNR++ + L +E + + +A++ Sbjct: 521 LSVLAVGRDLSDRMAFEATIWKQANFDALTGLPNRQMFHERLAQEASQPGRIGRRMALML 580 Query: 350 IDLDRFKDVNDSLGHSVGDQLLVVAAQRVRASVREHDLVARLAGDEFVAVLPRLEASAAL 409 IDLDRFK+VNDSLGH GD LL+ A +R+ A VR+ D VARL GDEF +LP L+ + ++ Sbjct: 581 IDLDRFKEVNDSLGHDRGDTLLIEAGKRIGACVRQSDTVARLGGDEFTVILPNLDDAESV 640 Query: 410 TRIGDDIVAALAEPFQLGEHRVRISASVGIAIYPHDADTVTTLIGCADQAMFAAKGGGRN 469 RI I+ LAEPF+LG +SASVG+ YP DA + L ADQAM+AAK GRN Sbjct: 641 ERIASTIIDKLAEPFKLGTDEAFVSASVGVTFYPDDAHDLDVLFKNADQAMYAAKNAGRN 700 Query: 470 GLAFFTEDMREKSFERRRLLNDLYDALQEGQFELHFQPALELQSGVIHKAEALVRWRHPA 529 ++F DM+ ++ +R RL +DL AL GQF++++QP +EL +G + KAEAL+RW HP Sbjct: 701 RFSYFKPDMQVEAEKRLRLTSDLRVALPSGQFQVYYQPIVELATGEVCKAEALIRWLHPE 760 Query: 530 FGMISPDRFIPLAEESGLIFDLGRWILQEAARVSVRWNAQGTSPFRKQISVNLSPVQFL- 588 G ISP FI +AE++GLI +G W+ ++A + + +W Q F QISVN+SPVQ Sbjct: 761 RGTISPHDFISVAEDTGLIVSIGDWVFKQAVQQARQWRDQFHPSF--QISVNMSPVQMRQ 818 Query: 589 NGHYDAIVMDQLSLQGCQPDLIAIEITEGLLLDDSEAVRSQLNNLRAAGIQVALDDFGTG 648 +G A D L+ +G + +EITEGLLL L LR+AGI +++DDFGTG Sbjct: 819 DGQLCARWSDFLAREGLPVQSVMVEITEGLLLQAESRTDETLLALRSAGIGISIDDFGTG 878 Query: 649 YSAMSYLKKFSMDYLKIDRSFVQDMVDADSNKAIVEAIIVMAHRLGMKVIAEGVETMVQA 708 YS++SYL++F +DYLKIDRSFV ++ + N+A+ EA++V+AH+LG+KVIAEGVET Q Sbjct: 879 YSSLSYLQRFDIDYLKIDRSFVHNLSFDEDNQALCEAMVVLAHKLGLKVIAEGVETAEQR 938 Query: 709 QLLRDAGCEYVQGYLYSRPLPEDDFLN--FAASAHSPADAAA 748 L+ C++ QG+LYS P+ +F + S ADA+A Sbjct: 939 DFLKAVDCDFAQGFLYSTPVLPHEFERRVWPMSERRAADASA 980 >D5CPV3.1 D5CPV3_SIDLE Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) Length = 927 Score = 462 bits (1189), Expect = e-127, Method: Compositional matrix adjust. Identities = 262/570 (45%), Positives = 352/570 (61%), Gaps = 32/570 (5%) Query: 177 QQRIRSSERQFRTLVDNSPDVILRYDMEGRCVFANPAFTRETGLMADQDINT---ILDRS 233 Q+R S R + +NS + IL D + + NPAF + TG A + + I Sbjct: 369 QKRAEESLRLAAMVYENSSEAILVTDADNLIIAVNPAFEQMTGYAAAEVLGKNPRIFKSG 428 Query: 234 ANRR------W---DDESCSFGERVRQVAATGVADVVVLEWRHPQGHLVSHEMHIVPEYD 284 + R W D E GE V D + G + I D Sbjct: 429 RHDRAFYHSMWLALDTEGYWHGE---------VWD------KRKNGEEYIKLLTINVIRD 473 Query: 285 ADEQIFGTLAIGRDVTRRKEVEFKLRHQANYDPLSGLPNRRLLGDMLQREVASAKKHAYP 344 D I+ +A+ D+T RK+VE + QANYD L+ LPNR++ D L++E A + Sbjct: 474 DDGAIYRHVALFTDITERKKVEELIWRQANYDSLTKLPNRQMFHDRLEQEAKKAHRAGLS 533 Query: 345 LAVVFIDLDRFKDVNDSLGHSVGDQLLVVAAQRVRASVREHDLVARLAGDEFVAVLPRLE 404 +A++ IDLDRFK+VND+LGH GD LL+ AA+R+ A VRE D VARL GDEF+ +L LE Sbjct: 534 MALLLIDLDRFKEVNDTLGHDKGDILLIEAARRISACVRESDTVARLGGDEFIVILSELE 593 Query: 405 ASAALTRIGDDIVAALAEPFQLGEHRVRISASVGIAIYPHDADTVTTLIGCADQAMFAAK 464 A++ R+ DI+ +LAEPF+L ISAS+GI++YP+DA + L ADQAM+ AK Sbjct: 594 DMASIDRVAQDILGSLAEPFKLDAEPAYISASIGISLYPNDATELDVLFKHADQAMYVAK 653 Query: 465 GGGRNGLAFFTEDMREKSFERRRLLNDLYDALQEGQFELHFQPALELQSGVIHKAEALVR 524 GRN +FT+DM+E + R L NDL A+ GQF +++QP +E+ SG I+KAEAL+R Sbjct: 654 YAGRNRFNYFTKDMQEAAQARMHLANDLRIAVAAGQFRVYYQPIVEMSSGQIYKAEALIR 713 Query: 525 WRHPAFGMISPDRFIPLAEESGLIFDLGRWILQEAARVSVRWNAQGTSPFRKQISVNLSP 584 W+HP GM+SP FIPLAEE+GLI +G W+ ++A + V+W + F QISVN SP Sbjct: 714 WQHPVRGMVSPAEFIPLAEETGLIVPIGEWVFRQAVQQVVQWRRKFHRSF--QISVNKSP 771 Query: 585 VQFLNGHYDAIVM-DQLSLQGCQPDLIAIEITEGLLLDDSEAVRSQLNNLRAAGIQVALD 643 VQF H +++ + L Q D I +EITEGLLLD V +L R AGIQVA+D Sbjct: 772 VQFR--HAESLSWPEYLEQQHVSGDSIIVEITEGLLLDAEVEVNKKLLRFRDAGIQVAID 829 Query: 644 DFGTGYSAMSYLKKFSMDYLKIDRSFVQDMVDADSNKAIVEAIIVMAHRLGMKVIAEGVE 703 DFGTGYS++SYLK+F +DYLKID+SFV+++ S+ A+ EAIIVMAH+LG KVIAEGVE Sbjct: 830 DFGTGYSSLSYLKEFDIDYLKIDQSFVRNLGPGTSDLALCEAIIVMAHKLGFKVIAEGVE 889 Query: 704 TMVQAQLLRDAGCEYVQGYLYSRPLPEDDF 733 T Q +LL AGC+Y QGYLYSRPLP ++F Sbjct: 890 TSTQHELLAAAGCDYGQGYLYSRPLPPEEF 919