BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0029.0224.p (119 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value D8IQU9.1 D8IQU9_HERSS Chemotaxis response regulator receiver dom... 236 1e-60 D8ISD3.1 D8ISD3_HERSS Chemotaxis regulator protein 179 9e-44 D8IQ22.1 D8IQ22_HERSS Chemotaxis regulator transmits chemorecept... 175 2e-42 F1W0D8.1 F1W0D8_9BURK Chemotaxis regulator-transmits chemorecept... 142 2e-32 A1K5H2.1 A1K5H2_AZOSB Chemotaxis response regulator 142 2e-32 Q47I39.1 Q47I39_DECAR Response regulator receiver 137 7e-31 D7DPR3.1 D7DPR3_METS0 Response regulator receiver protein 137 7e-31 C6WW56.1 C6WW56_METML Response regulator receiver protein 135 2e-30 D8ISH9.1 D8ISH9_HERSS CheY chemotaxis protein 135 2e-30 C4KBT7.1 C4KBT7_THASP Response regulator receiver protein 135 2e-30 >D8IQU9.1 D8IQU9_HERSS Chemotaxis response regulator receiver domain protein Length = 134 Score = 236 bits (601), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 118/119 (99%), Positives = 118/119 (99%) Query: 1 MRRIIIGLLKELEYLKVTDADDGTSAWKILESGALPISSVITDWNMPGMDGLGLLKKIRE 60 MRRIIIGLLKELEYLKVTDADDGTSAWKILESGALPIS VITDWNMPGMDGLGLLKKIRE Sbjct: 16 MRRIIIGLLKELEYLKVTDADDGTSAWKILESGALPISFVITDWNMPGMDGLGLLKKIRE 75 Query: 61 TPRLKRLPVLMVSAEAKKENIVLAAETGADGYIVKPFNAATLDDKISKILQRRSSMGLQ 119 TPRLKRLPVLMVSAEAKKENIVLAAETGADGYIVKPFNAATLDDKISKILQRRSSMGLQ Sbjct: 76 TPRLKRLPVLMVSAEAKKENIVLAAETGADGYIVKPFNAATLDDKISKILQRRSSMGLQ 134 >D8ISD3.1 D8ISD3_HERSS Chemotaxis regulator protein Length = 135 Score = 179 bits (455), Expect = 9e-44, Method: Compositional matrix adjust. Identities = 85/117 (72%), Positives = 100/117 (85%) Query: 1 MRRIIIGLLKELEYLKVTDADDGTSAWKILESGALPISSVITDWNMPGMDGLGLLKKIRE 60 MRRI+ GLLKELEY K+ +ADDG+SA KILE+GALP++ V+TDWNMP MDGL LLKKIR Sbjct: 17 MRRIVSGLLKELEYTKIVEADDGSSALKILEAGALPVTFVLTDWNMPVMDGLTLLKKIRA 76 Query: 61 TPRLKRLPVLMVSAEAKKENIVLAAETGADGYIVKPFNAATLDDKISKILQRRSSMG 117 TP + LPVLM++AEAKKENIV AA++GADGYIVKPFNAATL DKI KIL RR+ + Sbjct: 77 TPSMAHLPVLMITAEAKKENIVEAAQSGADGYIVKPFNAATLKDKIEKILARRAHLA 133 >D8IQ22.1 D8IQ22_HERSS Chemotaxis regulator transmits chemoreceptor signals to flagellar motor components protein Length = 133 Score = 175 bits (444), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 85/116 (73%), Positives = 97/116 (83%) Query: 1 MRRIIIGLLKELEYLKVTDADDGTSAWKILESGALPISSVITDWNMPGMDGLGLLKKIRE 60 MRRI+ GLLKELEY K+ +ADDG+SA KILESGA I+ V+TDWNMP MDGL LLKKIR Sbjct: 17 MRRIVSGLLKELEYTKIVEADDGSSALKILESGASNITFVLTDWNMPVMDGLTLLKKIRS 76 Query: 61 TPRLKRLPVLMVSAEAKKENIVLAAETGADGYIVKPFNAATLDDKISKILQRRSSM 116 TP L LPVLM++AEAKKENIV+AA+ GADGYIVKPFNA TL +KI KIL RR+ M Sbjct: 77 TPALSHLPVLMITAEAKKENIVMAAQEGADGYIVKPFNATTLKEKIEKILARRAHM 132 >F1W0D8.1 F1W0D8_9BURK Chemotaxis regulator-transmits chemoreceptor signals to flagelllar motor components CheY Length = 152 Score = 142 bits (357), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 70/116 (60%), Positives = 89/116 (76%), Gaps = 3/116 (2%) Query: 1 MRRIIIGLLKELEYLKVTDADDGTSAWKILESG---ALPISSVITDWNMPGMDGLGLLKK 57 MRRII GLLKE+ + K+ +A+DG +A ++L+S +PI VITDWNMP MDGL LLK+ Sbjct: 33 MRRIISGLLKEIGHSKIHEAEDGAAALRLLQSAQTHGVPIDFVITDWNMPVMDGLELLKR 92 Query: 58 IRETPRLKRLPVLMVSAEAKKENIVLAAETGADGYIVKPFNAATLDDKISKILQRR 113 IR P L LPVLMV+AE+KKENI+ AA GADGYIVKPF AATL +K+ KI+ ++ Sbjct: 93 IRLDPALNHLPVLMVTAESKKENIIAAAHAGADGYIVKPFTAATLKEKLDKIMLKK 148 >A1K5H2.1 A1K5H2_AZOSB Chemotaxis response regulator Length = 133 Score = 142 bits (357), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 69/112 (61%), Positives = 84/112 (75%), Gaps = 2/112 (1%) Query: 1 MRRIIIGLLKELEYLKVTDADDGTSAWKILESGALPISSVITDWNMPGMDGLGLLKKIRE 60 MRRI+ LLKEL Y V +A+DG A + L S P V+TDWNMP MDGL LL+ IR+ Sbjct: 17 MRRIVRNLLKELGYTNVDEAEDGAVALQKLNSA--PFDFVVTDWNMPNMDGLTLLQTIRQ 74 Query: 61 TPRLKRLPVLMVSAEAKKENIVLAAETGADGYIVKPFNAATLDDKISKILQR 112 TP+LK LPVLM++AEAKKENI+ AA+ GA GYIVKPF AATL +K+ KI +R Sbjct: 75 TPQLKHLPVLMITAEAKKENIIAAAQAGASGYIVKPFTAATLAEKLEKIFER 126 >Q47I39.1 Q47I39_DECAR Response regulator receiver Length = 131 Score = 137 bits (344), Expect = 7e-31, Method: Compositional matrix adjust. Identities = 66/112 (58%), Positives = 83/112 (74%), Gaps = 2/112 (1%) Query: 1 MRRIIIGLLKELEYLKVTDADDGTSAWKILESGALPISSVITDWNMPGMDGLGLLKKIRE 60 MRRI+ LLKEL Y V +A+DG A + L++G V+TDWNMP MDGL LL+ IR Sbjct: 18 MRRIVRNLLKELGYTNVDEAEDGAIALQKLQAGGFEF--VVTDWNMPNMDGLTLLQTIRA 75 Query: 61 TPRLKRLPVLMVSAEAKKENIVLAAETGADGYIVKPFNAATLDDKISKILQR 112 TP LK LPVLM++AEAKKENI+ AA+ GA GYIVKPF A TL +K++KI ++ Sbjct: 76 TPNLKHLPVLMITAEAKKENIIAAAQAGASGYIVKPFTAGTLSEKLNKIFEK 127 >D7DPR3.1 D7DPR3_METS0 Response regulator receiver protein Length = 132 Score = 137 bits (344), Expect = 7e-31, Method: Compositional matrix adjust. Identities = 66/117 (56%), Positives = 84/117 (71%), Gaps = 2/117 (1%) Query: 1 MRRIIIGLLKELEYLKVTDADDGTSAWKILESGALPISSVITDWNMPGMDGLGLLKKIRE 60 MRRI+ LLKEL Y V +A+DG L+ G V++DWNMP MDGL +L++IR Sbjct: 17 MRRIVRNLLKELGYTNVDEAEDGAVGLSKLKGGGFEF--VVSDWNMPNMDGLTMLQQIRA 74 Query: 61 TPRLKRLPVLMVSAEAKKENIVLAAETGADGYIVKPFNAATLDDKISKILQRRSSMG 117 P LK LPVLMV+AEAKKENI+ AA+ GA+GY+VKPF AATLD+K+SKI ++ G Sbjct: 75 DPELKHLPVLMVTAEAKKENIIAAAQAGANGYVVKPFTAATLDEKLSKIFEKLEKAG 131 >C6WW56.1 C6WW56_METML Response regulator receiver protein Length = 132 Score = 135 bits (341), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 66/117 (56%), Positives = 84/117 (71%), Gaps = 2/117 (1%) Query: 1 MRRIIIGLLKELEYLKVTDADDGTSAWKILESGALPISSVITDWNMPGMDGLGLLKKIRE 60 MRRI+ LLKEL Y V +A+DG +A L+ G V++DWNMP MDGL LL+ IR Sbjct: 17 MRRIVRNLLKELGYTNVDEAEDGVAALSKLKGGGFEF--VVSDWNMPNMDGLTLLQNIRA 74 Query: 61 TPRLKRLPVLMVSAEAKKENIVLAAETGADGYIVKPFNAATLDDKISKILQRRSSMG 117 L +LPVLMV+AEAKKENI+ AA+ GA+GY+VKPF AATLD+K+SKI ++ G Sbjct: 75 DAELSKLPVLMVTAEAKKENIIAAAQAGANGYVVKPFTAATLDEKLSKIFEKLEKAG 131 >D8ISH9.1 D8ISH9_HERSS CheY chemotaxis protein Length = 131 Score = 135 bits (341), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 66/117 (56%), Positives = 87/117 (74%), Gaps = 2/117 (1%) Query: 1 MRRIIIGLLKELEYLKVTDADDGTSAWKILESGALPISSVITDWNMPGMDGLGLLKKIRE 60 MRRI+ LLKEL Y V +A+DG A + L S V++DWNMP MDGL +L++IR+ Sbjct: 17 MRRIVRNLLKELGYTNVDEAEDGVQALQKLRSDQFDF--VVSDWNMPNMDGLTMLQEIRK 74 Query: 61 TPRLKRLPVLMVSAEAKKENIVLAAETGADGYIVKPFNAATLDDKISKILQRRSSMG 117 P L +LPVLMV+AEAKKENIV AA+ GA+GY+VKPF AATLD+K+ KI ++ ++ G Sbjct: 75 DPALSKLPVLMVTAEAKKENIVAAAQAGANGYVVKPFTAATLDEKLGKIFEKMAAGG 131 >C4KBT7.1 C4KBT7_THASP Response regulator receiver protein Length = 132 Score = 135 bits (341), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 66/112 (58%), Positives = 83/112 (74%), Gaps = 2/112 (1%) Query: 1 MRRIIIGLLKELEYLKVTDADDGTSAWKILESGALPISSVITDWNMPGMDGLGLLKKIRE 60 MRRI+ LLKEL + V +A+DG A + L+S P V+TDWNMP MDGL LL+ IR Sbjct: 17 MRRIVRNLLKELGFANVDEAEDGAVALQKLKSS--PYDFVVTDWNMPNMDGLTLLQSIRR 74 Query: 61 TPRLKRLPVLMVSAEAKKENIVLAAETGADGYIVKPFNAATLDDKISKILQR 112 TP LK LPVLM++AEAKKENI+ AA+ GA GY+VKPF AATL +K+ KI ++ Sbjct: 75 TPELKHLPVLMITAEAKKENIIAAAQAGASGYVVKPFTAATLAEKLEKIFEK 126