BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0029.0216.p         (59 letters)

Database: pfamseq 
           15,929,002 sequences; 5,169,768,107 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D8IQU2.1 D8IQU2_HERSS GAF domain containing protein                   122   1e-26

>D8IQU2.1 D8IQU2_HERSS GAF domain containing protein
          Length = 144

 Score =  122 bits (307), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 59/59 (100%), Positives = 59/59 (100%)

Query: 1   VRCFAGMRLRLNNGVVFGALCVMDTEPRIFRAREIRTFEGLAQIAEDIYRLFLFERQSH 59
           VRCFAGMRLRLNNGVVFGALCVMDTEPRIFRAREIRTFEGLAQIAEDIYRLFLFERQSH
Sbjct: 86  VRCFAGMRLRLNNGVVFGALCVMDTEPRIFRAREIRTFEGLAQIAEDIYRLFLFERQSH 144