BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0029.0171.p (261 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value D8IQP7.1 D8IQP7_HERSS Transcription regulator protein 530 e-149 B0LFS8.1 B0LFS8_9BACT IclR family transcriptional regulator 444 e-123 F1W1W4.1 F1W1W4_9BURK Putative transcriptional regulator (IclR f... 432 e-119 A6SVX6.1 A6SVX6_JANMA Transcriptional regulator, IclR family 429 e-118 A4G3C1.1 A4G3C1_HERAR Putative transcriptional regulator (IclR f... 412 e-113 D8NTB0.1 D8NTB0_RALSO Transcriptional regulator, IclR family 384 e-105 B3R4N2.1 B3R4N2_CUPTR Putative TRANSCRIPTIONal REGULATOR, IclR f... 384 e-105 Q0KBU6.1 Q0KBU6_CUPNH Transcriptional regulator, IclR-family 384 e-104 Q1LP35.1 Q1LP35_RALME Transcriptional regulator, IclR family 382 e-104 A9AGT7.1 A9AGT7_BURM1 Transcriptional regulator, IclR family 382 e-104 >D8IQP7.1 D8IQP7_HERSS Transcription regulator protein Length = 261 Score = 530 bits (1366), Expect = e-149, Method: Compositional matrix adjust. Identities = 261/261 (100%), Positives = 261/261 (100%) Query: 1 MKKEAGETEQHISIQVIERMVSLLDALAAYPDPVSLKELSAATDLHPSTAHRILNDLVVK 60 MKKEAGETEQHISIQVIERMVSLLDALAAYPDPVSLKELSAATDLHPSTAHRILNDLVVK Sbjct: 1 MKKEAGETEQHISIQVIERMVSLLDALAAYPDPVSLKELSAATDLHPSTAHRILNDLVVK 60 Query: 61 RFVDRVEPGTYRLGMRLLELGNIVKSRLSVREAALDFMRALHRKTHQTINLSVRQADEIV 120 RFVDRVEPGTYRLGMRLLELGNIVKSRLSVREAALDFMRALHRKTHQTINLSVRQADEIV Sbjct: 61 RFVDRVEPGTYRLGMRLLELGNIVKSRLSVREAALDFMRALHRKTHQTINLSVRQADEIV 120 Query: 121 YIDRSFSERSGMQVVRAIGGRAPLHLTSTGKLFLSVDDPKNVRAYATRTGLAGHNKNSIT 180 YIDRSFSERSGMQVVRAIGGRAPLHLTSTGKLFLSVDDPKNVRAYATRTGLAGHNKNSIT Sbjct: 121 YIDRSFSERSGMQVVRAIGGRAPLHLTSTGKLFLSVDDPKNVRAYATRTGLAGHNKNSIT 180 Query: 181 DLAKLERELSMVRALGYARDNEELELGVRCMAAGICDDSGKLVAGLSISAPADRLQDEWV 240 DLAKLERELSMVRALGYARDNEELELGVRCMAAGICDDSGKLVAGLSISAPADRLQDEWV Sbjct: 181 DLAKLERELSMVRALGYARDNEELELGVRCMAAGICDDSGKLVAGLSISAPADRLQDEWV 240 Query: 241 EDLVSTASQISSALGYRQDRS 261 EDLVSTASQISSALGYRQDRS Sbjct: 241 EDLVSTASQISSALGYRQDRS 261 >B0LFS8.1 B0LFS8_9BACT IclR family transcriptional regulator Length = 259 Score = 444 bits (1143), Expect = e-123, Method: Compositional matrix adjust. Identities = 215/244 (88%), Positives = 228/244 (93%) Query: 13 SIQVIERMVSLLDALAAYPDPVSLKELSAATDLHPSTAHRILNDLVVKRFVDRVEPGTYR 72 SIQVIERMV+LLDALA Y DPVSLKELS + LHPSTAHRILND+V+ RFVDRVEPGTYR Sbjct: 12 SIQVIERMVALLDALANYTDPVSLKELSKVSGLHPSTAHRILNDMVITRFVDRVEPGTYR 71 Query: 73 LGMRLLELGNIVKSRLSVREAALDFMRALHRKTHQTINLSVRQADEIVYIDRSFSERSGM 132 LGMRLLELGN+VKSRLSVREAALDFMRALH+KT QTINLSVRQ DEIVYIDR+FSERSGM Sbjct: 72 LGMRLLELGNVVKSRLSVREAALDFMRALHKKTQQTINLSVRQGDEIVYIDRAFSERSGM 131 Query: 133 QVVRAIGGRAPLHLTSTGKLFLSVDDPKNVRAYATRTGLAGHNKNSITDLAKLERELSMV 192 QVVRAIGGR PLHLTSTGKLFLSVD+PK +RAYATRTGLAGHNKNSITDL KLERELSMV Sbjct: 132 QVVRAIGGRGPLHLTSTGKLFLSVDEPKAIRAYATRTGLAGHNKNSITDLGKLERELSMV 191 Query: 193 RALGYARDNEELELGVRCMAAGICDDSGKLVAGLSISAPADRLQDEWVEDLVSTASQISS 252 R GYARDNEELELGVRCMAAGI DDSGKLVAGLSISAPADRLQ+EW+EDLV TA+QIS+ Sbjct: 192 RTRGYARDNEELELGVRCMAAGIHDDSGKLVAGLSISAPADRLQEEWLEDLVGTAAQISA 251 Query: 253 ALGY 256 LGY Sbjct: 252 TLGY 255 >F1W1W4.1 F1W1W4_9BURK Putative transcriptional regulator (IclR family) Length = 261 Score = 432 bits (1110), Expect = e-119, Method: Compositional matrix adjust. Identities = 207/244 (84%), Positives = 229/244 (93%) Query: 13 SIQVIERMVSLLDALAAYPDPVSLKELSAATDLHPSTAHRILNDLVVKRFVDRVEPGTYR 72 SIQVIER+ SLLDALA YPDPVSLK+LSA T LHPSTAHRILNDLV+KRFV+R EPG YR Sbjct: 13 SIQVIERLTSLLDALARYPDPVSLKQLSADTGLHPSTAHRILNDLVLKRFVERAEPGAYR 72 Query: 73 LGMRLLELGNIVKSRLSVREAALDFMRALHRKTHQTINLSVRQADEIVYIDRSFSERSGM 132 LGMRLLELGN+VKSRL+VREAA+DFMRALHRKT QT+NLSVRQ DEIVYIDR+FSERSGM Sbjct: 73 LGMRLLELGNVVKSRLNVREAAVDFMRALHRKTFQTVNLSVRQGDEIVYIDRAFSERSGM 132 Query: 133 QVVRAIGGRAPLHLTSTGKLFLSVDDPKNVRAYATRTGLAGHNKNSITDLAKLERELSMV 192 QVVRAIGGRAPLHLTSTGKLFLSVDDPK+VR+YATRTGL+GHNKNSIT+L LERELS+V Sbjct: 133 QVVRAIGGRAPLHLTSTGKLFLSVDDPKSVRSYATRTGLSGHNKNSITELTTLERELSLV 192 Query: 193 RALGYARDNEELELGVRCMAAGICDDSGKLVAGLSISAPADRLQDEWVEDLVSTASQISS 252 RA G+ARDNEELELGVRCMAAGI DDSG+L+AGLSISAPADRLQ+EW+EDL+ T +QIS+ Sbjct: 193 RARGFARDNEELELGVRCMAAGIRDDSGRLIAGLSISAPADRLQEEWLEDLMLTVNQISA 252 Query: 253 ALGY 256 LGY Sbjct: 253 VLGY 256 >A6SVX6.1 A6SVX6_JANMA Transcriptional regulator, IclR family Length = 258 Score = 429 bits (1104), Expect = e-118, Method: Compositional matrix adjust. Identities = 209/256 (81%), Positives = 233/256 (91%), Gaps = 1/256 (0%) Query: 3 KEAGETEQHISIQVIERMVSLLDALAAYPDPVSLKELSAATDLHPSTAHRILNDLVVKRF 62 K A +T++ SIQVIERMV+LLDALA YPDPVSLKELS+ T LHPSTAHRILNDLV+KRF Sbjct: 2 KTAADTDK-TSIQVIERMVALLDALALYPDPVSLKELSSVTGLHPSTAHRILNDLVIKRF 60 Query: 63 VDRVEPGTYRLGMRLLELGNIVKSRLSVREAALDFMRALHRKTHQTINLSVRQADEIVYI 122 VDR EPGTYRLGMRLLELGNIVKSRL VREAALD MR LHRKT+QT+NLSVRQ DEI+YI Sbjct: 61 VDRSEPGTYRLGMRLLELGNIVKSRLDVREAALDLMRHLHRKTNQTVNLSVRQNDEIIYI 120 Query: 123 DRSFSERSGMQVVRAIGGRAPLHLTSTGKLFLSVDDPKNVRAYATRTGLAGHNKNSITDL 182 DR+FSERSGMQVVRA+GGRAPLHLTSTGKLFLS+D+P+ V+AYATRTGLAGHNKNSITDL Sbjct: 121 DRAFSERSGMQVVRAVGGRAPLHLTSTGKLFLSIDEPRMVQAYATRTGLAGHNKNSITDL 180 Query: 183 AKLERELSMVRALGYARDNEELELGVRCMAAGICDDSGKLVAGLSISAPADRLQDEWVED 242 KLE EL+ VR GYARDNEELELGVRCMAAGI DD+G+L+AGLSISAPADRLQ+EW+ D Sbjct: 181 KKLEGELNQVRLHGYARDNEELELGVRCMAAGIHDDTGRLIAGLSISAPADRLQEEWLAD 240 Query: 243 LVSTASQISSALGYRQ 258 L+ TA QIS+ALGY + Sbjct: 241 LMDTAKQISAALGYSE 256 >A4G3C1.1 A4G3C1_HERAR Putative transcriptional regulator (IclR family) Length = 245 Score = 412 bits (1059), Expect = e-113, Method: Compositional matrix adjust. Identities = 201/237 (84%), Positives = 217/237 (91%) Query: 20 MVSLLDALAAYPDPVSLKELSAATDLHPSTAHRILNDLVVKRFVDRVEPGTYRLGMRLLE 79 MVSLLDALA YPDPVSLKELS T LHPSTAHRILNDLV+KRFVDR EPG YRLGMRLLE Sbjct: 1 MVSLLDALATYPDPVSLKELSRVTGLHPSTAHRILNDLVLKRFVDRSEPGAYRLGMRLLE 60 Query: 80 LGNIVKSRLSVREAALDFMRALHRKTHQTINLSVRQADEIVYIDRSFSERSGMQVVRAIG 139 LGNIVKSRLSVREAALD MR LHRKT+QT+NLSVRQ DEI+YIDR+FSERSGMQVVRAIG Sbjct: 61 LGNIVKSRLSVREAALDLMRHLHRKTNQTVNLSVRQNDEIIYIDRAFSERSGMQVVRAIG 120 Query: 140 GRAPLHLTSTGKLFLSVDDPKNVRAYATRTGLAGHNKNSITDLAKLERELSMVRALGYAR 199 GRAPLHLTSTGKLFLS+D+PK V+AYA RT L GHNKNSITDL +LE ELS+VRA GYAR Sbjct: 121 GRAPLHLTSTGKLFLSIDEPKMVQAYAIRTHLVGHNKNSITDLNRLENELSLVRAHGYAR 180 Query: 200 DNEELELGVRCMAAGICDDSGKLVAGLSISAPADRLQDEWVEDLVSTASQISSALGY 256 DNEELELGVRCMAAGI DD+GKL+AGLSISAPADRLQ+EW+EDL+ TA +IS ALGY Sbjct: 181 DNEELELGVRCMAAGIHDDTGKLIAGLSISAPADRLQEEWLEDLMRTAREISVALGY 237 >D8NTB0.1 D8NTB0_RALSO Transcriptional regulator, IclR family Length = 266 Score = 384 bits (987), Expect = e-105, Method: Compositional matrix adjust. Identities = 193/254 (75%), Positives = 218/254 (85%), Gaps = 4/254 (1%) Query: 3 KEAGETEQHISIQVIERMVSLLDALAAYPDPVSLKELSAATDLHPSTAHRILNDLVVKRF 62 KE G+T SIQVIERM+ LLDALA + DPVSLK LSA+T LHPSTAHRILND+V RF Sbjct: 6 KEPGKT----SIQVIERMMLLLDALAGHADPVSLKALSASTGLHPSTAHRILNDMVACRF 61 Query: 63 VDRVEPGTYRLGMRLLELGNIVKSRLSVREAALDFMRALHRKTHQTINLSVRQADEIVYI 122 VDR +PG+YRLGMRLLELGN+VK+RLSVREAAL MRALHR T QT+NLSVRQ DEIVYI Sbjct: 62 VDRSDPGSYRLGMRLLELGNLVKARLSVREAALAPMRALHRLTGQTVNLSVRQGDEIVYI 121 Query: 123 DRSFSERSGMQVVRAIGGRAPLHLTSTGKLFLSVDDPKNVRAYATRTGLAGHNKNSITDL 182 +R++SERSGMQVVRAIGGRAPLHLTS GKLFL+ D+ VRAYATRTGL+GH + SITDL Sbjct: 122 ERAYSERSGMQVVRAIGGRAPLHLTSVGKLFLAADETGRVRAYATRTGLSGHTRTSITDL 181 Query: 183 AKLERELSMVRALGYARDNEELELGVRCMAAGICDDSGKLVAGLSISAPADRLQDEWVED 242 +KLERELS VR GYARDNEELELGVRC+AAGI DDS +LVAGLS+SAPADRLQD W+E+ Sbjct: 182 SKLERELSWVRTNGYARDNEELELGVRCIAAGIYDDSRRLVAGLSLSAPADRLQDSWLEN 241 Query: 243 LVSTASQISSALGY 256 L TA QIS +G+ Sbjct: 242 LKDTALQISKGMGF 255 >B3R4N2.1 B3R4N2_CUPTR Putative TRANSCRIPTIONal REGULATOR, IclR family Length = 261 Score = 384 bits (985), Expect = e-105, Method: Compositional matrix adjust. Identities = 190/253 (75%), Positives = 217/253 (85%) Query: 4 EAGETEQHISIQVIERMVSLLDALAAYPDPVSLKELSAATDLHPSTAHRILNDLVVKRFV 63 +A ++ SIQVIERM++LLDALA + DPVSLKELS AT LHPSTAHRILND+V RFV Sbjct: 3 DADKSPGKTSIQVIERMMTLLDALAQHADPVSLKELSLATGLHPSTAHRILNDMVACRFV 62 Query: 64 DRVEPGTYRLGMRLLELGNIVKSRLSVREAALDFMRALHRKTHQTINLSVRQADEIVYID 123 DR +PG+YRLGMRLLELGN+VK+RLSVR+AAL MRALHR T QT+NLSVRQ DEIVYI+ Sbjct: 63 DRSDPGSYRLGMRLLELGNLVKARLSVRDAALAPMRALHRVTGQTVNLSVRQGDEIVYIE 122 Query: 124 RSFSERSGMQVVRAIGGRAPLHLTSTGKLFLSVDDPKNVRAYATRTGLAGHNKNSITDLA 183 R++SERSGMQVVRAIGGRAPLHLTS GKLFL+ D+ VR YATRTGLAGH + SITDLA Sbjct: 123 RAYSERSGMQVVRAIGGRAPLHLTSVGKLFLAADESARVRNYATRTGLAGHTRTSITDLA 182 Query: 184 KLERELSMVRALGYARDNEELELGVRCMAAGICDDSGKLVAGLSISAPADRLQDEWVEDL 243 KLEREL+ VR GYARDNEELELGVRC+AAGI DDS +LVAGLS+SAPADRLQD W+++L Sbjct: 183 KLERELNWVRTNGYARDNEELELGVRCIAAGIYDDSRRLVAGLSLSAPADRLQDSWLQNL 242 Query: 244 VSTASQISSALGY 256 TA QIS +GY Sbjct: 243 KDTALQISRGMGY 255 >Q0KBU6.1 Q0KBU6_CUPNH Transcriptional regulator, IclR-family Length = 272 Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust. Identities = 190/253 (75%), Positives = 217/253 (85%) Query: 4 EAGETEQHISIQVIERMVSLLDALAAYPDPVSLKELSAATDLHPSTAHRILNDLVVKRFV 63 +A ++ SIQVIERM++LLDALA + DPVSLKELS AT LHPSTAHRILND+V RFV Sbjct: 14 DADKSPGKTSIQVIERMMTLLDALAQHADPVSLKELSLATGLHPSTAHRILNDMVACRFV 73 Query: 64 DRVEPGTYRLGMRLLELGNIVKSRLSVREAALDFMRALHRKTHQTINLSVRQADEIVYID 123 DR +PG+YRLGMRLLELGN+VK+RLSVR+AAL MRALHR T QT+NLSVRQ DEIVYI+ Sbjct: 74 DRSDPGSYRLGMRLLELGNLVKARLSVRDAALAPMRALHRVTGQTVNLSVRQGDEIVYIE 133 Query: 124 RSFSERSGMQVVRAIGGRAPLHLTSTGKLFLSVDDPKNVRAYATRTGLAGHNKNSITDLA 183 R++SERSGMQVVRAIGGRAPLHLTS GKLFL+ D+ VR YATRTGLAGH + SITDL Sbjct: 134 RAYSERSGMQVVRAIGGRAPLHLTSVGKLFLAADEAARVRNYATRTGLAGHTRTSITDLT 193 Query: 184 KLERELSMVRALGYARDNEELELGVRCMAAGICDDSGKLVAGLSISAPADRLQDEWVEDL 243 KLERELS VR+ GYARDNEELELGVRC+AAGI DDS +LVAGLS+SAPADRLQD W+++L Sbjct: 194 KLERELSWVRSNGYARDNEELELGVRCIAAGIYDDSRRLVAGLSLSAPADRLQDSWLQNL 253 Query: 244 VSTASQISSALGY 256 TA QIS +GY Sbjct: 254 KDTALQISRGMGY 266 >Q1LP35.1 Q1LP35_RALME Transcriptional regulator, IclR family Length = 261 Score = 382 bits (982), Expect = e-104, Method: Compositional matrix adjust. Identities = 189/253 (74%), Positives = 218/253 (86%) Query: 4 EAGETEQHISIQVIERMVSLLDALAAYPDPVSLKELSAATDLHPSTAHRILNDLVVKRFV 63 EA ++ SIQVIERM++LLDALA + DPVSLKELS AT LHPSTAHRILND+V RFV Sbjct: 3 EADKSPGKTSIQVIERMMTLLDALAQHADPVSLKELSLATGLHPSTAHRILNDMVACRFV 62 Query: 64 DRVEPGTYRLGMRLLELGNIVKSRLSVREAALDFMRALHRKTHQTINLSVRQADEIVYID 123 DR +PG+YRLGMRLLELGN+VK+RLSVR+AAL MRALHR T QT+NLSVRQ DEIVYI+ Sbjct: 63 DRSDPGSYRLGMRLLELGNLVKARLSVRDAALAPMRALHRVTGQTVNLSVRQGDEIVYIE 122 Query: 124 RSFSERSGMQVVRAIGGRAPLHLTSTGKLFLSVDDPKNVRAYATRTGLAGHNKNSITDLA 183 R++SERSGMQVVRAIGGRAPLHLTS GKLFL+ D+ VR YATRTGLAGH + SITD++ Sbjct: 123 RAYSERSGMQVVRAIGGRAPLHLTSVGKLFLAADEGARVRNYATRTGLAGHTRTSITDIS 182 Query: 184 KLERELSMVRALGYARDNEELELGVRCMAAGICDDSGKLVAGLSISAPADRLQDEWVEDL 243 KLEREL+ VR+ GYARDNEELELGVRC+AAGI DDS +LVAGLS+SAPADRLQD W+++L Sbjct: 183 KLERELTWVRSNGYARDNEELELGVRCIAAGIYDDSRRLVAGLSLSAPADRLQDSWLQNL 242 Query: 244 VSTASQISSALGY 256 TA QIS +GY Sbjct: 243 KDTALQISRGMGY 255 >A9AGT7.1 A9AGT7_BURM1 Transcriptional regulator, IclR family Length = 269 Score = 382 bits (980), Expect = e-104, Method: Compositional matrix adjust. Identities = 189/247 (76%), Positives = 212/247 (85%) Query: 13 SIQVIERMVSLLDALAAYPDPVSLKELSAATDLHPSTAHRILNDLVVKRFVDRVEPGTYR 72 SIQVIERM+ LLDALAA+ DPVSLKEL+ T+LHPSTAHRILND+V R VDR +PGTYR Sbjct: 11 SIQVIERMMRLLDALAAHSDPVSLKELAQRTELHPSTAHRILNDMVTCRLVDRSDPGTYR 70 Query: 73 LGMRLLELGNIVKSRLSVREAALDFMRALHRKTHQTINLSVRQADEIVYIDRSFSERSGM 132 LGMRLLELGN+VK+RLSVR+AAL MR LHR T QT+NLSVRQ DEIVYI+R++SERSGM Sbjct: 71 LGMRLLELGNLVKARLSVRDAALMPMRELHRLTGQTVNLSVRQGDEIVYIERAYSERSGM 130 Query: 133 QVVRAIGGRAPLHLTSTGKLFLSVDDPKNVRAYATRTGLAGHNKNSITDLAKLERELSMV 192 QVVRAIGGRAPLHLTS GKLFL+ D+ VRAYATRTGL+GH +NSITDL KLEREL++V Sbjct: 131 QVVRAIGGRAPLHLTSVGKLFLAADETSRVRAYATRTGLSGHTQNSITDLTKLERELTLV 190 Query: 193 RALGYARDNEELELGVRCMAAGICDDSGKLVAGLSISAPADRLQDEWVEDLVSTASQISS 252 R ARDNEELELGVRC+AAGI DDSGKLVAGLS+SAPADRLQD W+ L TA IS Sbjct: 191 RQQSCARDNEELELGVRCIAAGIYDDSGKLVAGLSLSAPADRLQDAWISQLSRTALTISE 250 Query: 253 ALGYRQD 259 ALGYR + Sbjct: 251 ALGYRPE 257