BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0029.0078.p (588 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value D8IQ05.1 D8IQ05_HERSS Outer membrane lipoprotein 1192 0.0 Q8XWT6.1 Q8XWT6_RALSO Putative outer membrane protein 627 e-177 B5RV85.1 B5RV85_RALSO Outer membrane protein 626 e-177 B2UA30.1 B2UA30_RALPJ Surface antigen (D15) 626 e-177 E2T0K8.1 E2T0K8_9RALS Outer membrane protein, OMP85 family 626 e-177 D8N8F8.1 D8N8F8_RALSO Putative uncharacterized protein 625 e-177 C6BBL1.1 C6BBL1_RALP1 Surface antigen (D15) 625 e-177 Q474Y0.1 Q474Y0_CUPPJ Surface antigen (D15) 625 e-177 B5SHZ4.1 B5SHZ4_RALSO Outer membrane protein 624 e-176 A3RRV7.1 A3RRV7_RALSO Outer membrane protein 624 e-176 >D8IQ05.1 D8IQ05_HERSS Outer membrane lipoprotein Length = 588 Score = 1192 bits (3083), Expect = 0.0, Method: Compositional matrix adjust. Identities = 582/588 (98%), Positives = 584/588 (99%) Query: 1 MKWTRSLAITLLWCAAEPAIAAYQVDIEAPKPVQSLLKDFLDLSRYQDRDDISDEQLKFM 60 MKWTRSLAITLLWCAAEPAIAAYQVDIEAPKPVQSLLKDFLDLSRYQDRDDISDEQLKFM Sbjct: 1 MKWTRSLAITLLWCAAEPAIAAYQVDIEAPKPVQSLLKDFLDLSRYQDRDDISDEQLKFM 60 Query: 61 MDTAGEQVRDLTATEGYFTPVTKVSEESAASKDGVRRITVTVDPGPRTLVESAEISVTGS 120 MDTAGEQVRDLTATEGYFTPVTKVSEESAA KDGVRRITVTVDPGPRTLVESAEISVTGS Sbjct: 61 MDTAGEQVRDLTATEGYFTPVTKVSEESAAGKDGVRRITVTVDPGPRTLVESAEISVTGS 120 Query: 121 AASQDAARVAQLRTDWSLSRGEPFRQQDWDKAKNAGLATLQQKKYAAARIADSEARIDPQ 180 AASQDAARVAQLRTDWSLS GEPFRQQDWDKAKNAGLATLQQKKYAAARIADSEARI PQ Sbjct: 121 AASQDAARVAQLRTDWSLSPGEPFRQQDWDKAKNAGLATLQQKKYAAARIADSEARIAPQ 180 Query: 181 VQQADLSVRYDSGPAFTLGALQITGTRRYPESIIRNVSPLIVGEPYDVDRLLALQRQIQN 240 QQADLSVRYDSGPAFTLGALQITGTRRYPESIIRNVSPLIVGEPYDVDRLLALQRQIQN Sbjct: 181 AQQADLSVRYDSGPAFTLGALQITGTRRYPESIIRNVSPLIVGEPYDVDRLLALQRQIQN 240 Query: 241 TPYFSNAIVAIDDDPAHPDQTPVKVQVTEFPTQRIRTGVGYGTDTGAQAEGRYSHYNVFN 300 TPYFSNAIVAIDDDPAHPDQTPVKVQVTEFPTQRIRTGVGYGTDTGAQAEGRYSHYNVFN Sbjct: 241 TPYFSNAIVAIDDDPAHPDQTPVKVQVTEFPTQRIRTGVGYGTDTGAQAEGRYSHYNVFN 300 Query: 301 RAYVFDSQLRLEQKRQYGLLSLAMPPDSKAFVNSINTAYDRTTLEGIDLRTQQVGLKRAR 360 RAYVFDSQLRLEQKRQYGLLSLAMPPDSKAFVNSINTAYDRTTLEGIDLRTQQVGLKRAR Sbjct: 301 RAYVFDSQLRLEQKRQYGLLSLAMPPDSKAFVNSINTAYDRTTLEGIDLRTQQVGLKRAR 360 Query: 361 NSDNYDTTYSLTYYRDELVQENGVTLPANTIVTPGKHRALVPGFAWSRRNVDNPIFPRHG 420 NSDNYDTTYSLTYYRDELVQENGVTLPANTIVTPGKHRALVPGFAWSRRNVDNPIFPRHG Sbjct: 361 NSDNYDTTYSLTYYRDELVQENGVTLPANTIVTPGKHRALVPGFAWSRRNVDNPIFPRHG 420 Query: 421 NLLTLEAGVALKGVLTDQSFSRLYGRFKQFVPVGKRDIVVLRAELGGVFTAGRAGSVPAS 480 NLLTLEAG+ALKGVLTDQSFSRLYGRFKQFVPVGKRDIVVLRAELGGVFTAGRAGSVPAS Sbjct: 421 NLLTLEAGLALKGVLTDQSFSRLYGRFKQFVPVGKRDIVVLRAELGGVFTAGRAGSVPAS 480 Query: 481 LLFRTGGNDSVRGYSYQSIGNEQNGTVYPTKYLAVGSTEYQRWFSENWGAAVFYDMGAAA 540 LLFRTGGNDSVRGYSYQSIGNEQNGTVYPTKYLAVGSTEYQRWFSENWGAAVFYDMGAAA Sbjct: 481 LLFRTGGNDSVRGYSYQSIGNEQNGTVYPTKYLAVGSTEYQRWFSENWGAAVFYDMGAAA 540 Query: 541 DNWSNKTFYHGVGTGARWRSPVGTLNLDLAYGIQKRQVRPHISLGIAF 588 DNWSNKTFYHGVGTGARWRSPVGTLNLDLAYGIQKRQ+RPHISLGIAF Sbjct: 541 DNWSNKTFYHGVGTGARWRSPVGTLNLDLAYGIQKRQIRPHISLGIAF 588 >Q8XWT6.1 Q8XWT6_RALSO Putative outer membrane protein Length = 589 Score = 627 bits (1618), Expect = e-177, Method: Compositional matrix adjust. Identities = 311/579 (53%), Positives = 401/579 (69%), Gaps = 13/579 (2%) Query: 10 TLLWCAAEPAIAAYQVDIEAPKPVQSLLKDFLDLSRYQDRDDISDEQLKFMMDTAGEQVR 69 +L A A AAY+V IEAP+P++ LL+ LDL+RYQDR DI+D+QL++M++T GEQV Sbjct: 24 CVLSVACTAARAAYEVRIEAPRPLRDLLERHLDLARYQDRKDITDDQLQYMVETIGEQVT 83 Query: 70 DLTATEGYFTPVTKVSEESAASKDGVRRITVTVDPGPRTLVESAEISVTGSAASQDAARV 129 LTATEGYF P E + VR V V+ GPRT ++S + TG+ A Q+ R+ Sbjct: 84 KLTATEGYFVPKATAQLEGPPERRTVR---VKVEAGPRTTIDSVALDFTGAIA-QEPKRI 139 Query: 130 AQLRTDWSLSRGEPFRQQDWDKAKNAGLATLQQKKYAAARIADSEARIDPQVQQADLSVR 189 L+ W L +G PFRQ WDKAK LA LQ K+Y AAR S+AR+DP +ADLSV Sbjct: 140 DALKKAWGLPQGAPFRQSGWDKAKEDSLAALQSKRYYAARQTASQARVDPDENKADLSVA 199 Query: 190 YDSGPAFTLGALQITGTRRYPESIIRNVSPLIVGEPYDVDRLLALQRQIQNTPYFSNAIV 249 YDSGPA+TLG L + G RYP SII +V+PLIVGE Y DRL AL IQ PYF+NAIV Sbjct: 200 YDSGPAYTLGPLDVQGLSRYPRSIIDHVNPLIVGEDYSADRLQALAAAIQGQPYFANAIV 259 Query: 250 AIDDDPAHPDQTPVKVQVTEFPTQRIRTGVGYGTDTGAQAEGRYSHYNVFNRAYVFDSQL 309 + DDP +P PV+V+V E+P RI +GVGY TDTGAQ EGRY + N+F++A+V D+Q Sbjct: 260 DLGDDPNNPVAAPVRVRVREYPPNRITSGVGYSTDTGAQVEGRYQYLNLFDKAWVLDTQA 319 Query: 310 RLEQKRQYGLLSLAMPPDSKAFVNSINTAYDRTTLEGIDLRTQQVGLKRARNSDNYDTTY 369 R+EQ+RQY S+ +PPD K +VNS+ + DRT L G D R+ + G K+ R Y+T++ Sbjct: 320 RIEQRRQYLFGSVTLPPDGKRYVNSLYGSLDRTNLSGTDTRSYRSGFKQTRVRGIYETSF 379 Query: 370 SLTYYRDELVQENGVTLPANTIVTPGKHRALVPGFAWSRRNVDNPIFPRHGNLLTLEAGV 429 ++ +Y D+L E +ALVPGFAW+RR+VD+P+FPR GN+LT + G Sbjct: 380 TIDFYYDDLRPEGAAR---------ELSKALVPGFAWTRRDVDDPLFPRRGNILTTQIGA 430 Query: 430 ALKGVLTDQSFSRLYGRFKQFVPVGKRDIVVLRAELGGVFTAGRAGSVPASLLFRTGGND 489 A+KG+LTDQSF R Y R +Q+VPVG+RDI V RAELG V TAG A VPA+L FRTGG Sbjct: 431 AVKGLLTDQSFVRSYSRIRQYVPVGQRDIFVARAELGAVLTAGAADGVPATLRFRTGGTQ 490 Query: 490 SVRGYSYQSIGNEQNGTVYPTKYLAVGSTEYQRWFSENWGAAVFYDMGAAADNWSNKTFY 549 S+RGY +QSIGN+ NG+ PTK+L G EYQRWF WGAAVF+D G A DNW+ + ++ Sbjct: 491 SIRGYDFQSIGNDVNGSTLPTKFLVTGGVEYQRWFLPQWGAAVFWDTGTATDNWTQRRWF 550 Query: 550 HGVGTGARWRSPVGTLNLDLAYGIQKRQVRPHISLGIAF 588 +GVG G RW+SPVG + LDLAYGIQ+ Q RP ++LGIAF Sbjct: 551 NGVGVGVRWKSPVGPIQLDLAYGIQQHQFRPSVALGIAF 589 >B5RV85.1 B5RV85_RALSO Outer membrane protein Length = 589 Score = 626 bits (1615), Expect = e-177, Method: Compositional matrix adjust. Identities = 313/575 (54%), Positives = 405/575 (70%), Gaps = 15/575 (2%) Query: 14 CAAEPAIAAYQVDIEAPKPVQSLLKDFLDLSRYQDRDDISDEQLKFMMDTAGEQVRDLTA 73 C A A AAY+V IEAPKP++ LL+ LDL+RYQDR DI+D+QL++M++T GEQV LTA Sbjct: 30 CTA--ARAAYEVRIEAPKPLRDLLERHLDLARYQDRKDITDDQLQYMVETIGEQVAKLTA 87 Query: 74 TEGYFTPVTKVSEESAASKDGVRRITVTVDPGPRTLVESAEISVTGSAASQDAARVAQLR 133 TEGYF P E + VR V V+ GPRT ++S ++ TG A +Q+ R+ +L+ Sbjct: 88 TEGYFVPKATAQLEGPPERRIVR---VQVEAGPRTTIDSVALAFTG-AITQEPKRIDELK 143 Query: 134 TDWSLSRGEPFRQQDWDKAKNAGLATLQQKKYAAARIADSEARIDPQVQQADLSVRYDSG 193 W L +G PFRQ WDKAK+ LA LQ K+Y AAR S+AR+DP +ADLSV YDSG Sbjct: 144 KAWGLPQGAPFRQSSWDKAKDDNLAALQGKRYYAARRTASQARVDPDAGKADLSVAYDSG 203 Query: 194 PAFTLGALQITGTRRYPESIIRNVSPLIVGEPYDVDRLLALQRQIQNTPYFSNAIVAIDD 253 PA+TLG L + G RYP SII +V+PL VG+ Y DRL AL IQ PYF+NAIV + D Sbjct: 204 PAYTLGPLDVQGLSRYPRSIIDHVNPLRVGDDYSADRLQALAAAIQGQPYFANAIVDLGD 263 Query: 254 DPAHPDQTPVKVQVTEFPTQRIRTGVGYGTDTGAQAEGRYSHYNVFNRAYVFDSQLRLEQ 313 DP +P PV+V+V E+P RI +GVGYGTDTGAQ EGRY + N+F++A+V D+Q R+EQ Sbjct: 264 DPKNPVAAPVRVRVREYPPNRITSGVGYGTDTGAQVEGRYQYLNLFDKAWVLDTQARIEQ 323 Query: 314 KRQYGLLSLAMPPDSKAFVNSINTAYDRTTLEGIDLRTQQVGLKRARNSDNYDTTYSLTY 373 +RQY S+ +PPD + +VNS+ + DRT L G D R+ + G K+ R Y+T++++ Y Sbjct: 324 RRQYLFGSVTLPPDDQRYVNSLYGSLDRTNLSGTDTRSYRSGFKQTRVRGIYETSFTIDY 383 Query: 374 YRDELVQENGVTLPANTIVTPGKHRALVPGFAWSRRNVDNPIFPRHGNLLTLEAGVALKG 433 Y D+L E A + +ALVPGFAW+RR+VD+P+FPR GN+LT + G A+KG Sbjct: 384 YYDDLRPEGA----AREL-----SKALVPGFAWTRRDVDDPLFPRRGNILTTQIGAAVKG 434 Query: 434 VLTDQSFSRLYGRFKQFVPVGKRDIVVLRAELGGVFTAGRAGSVPASLLFRTGGNDSVRG 493 +LTDQSF R Y R +Q+VPVG+RDI+V RAELG V TAG A VPA+L FRTGG SVRG Sbjct: 435 LLTDQSFVRSYSRIRQYVPVGQRDILVARAELGAVLTAGAADGVPATLRFRTGGTQSVRG 494 Query: 494 YSYQSIGNEQNGTVYPTKYLAVGSTEYQRWFSENWGAAVFYDMGAAADNWSNKTFYHGVG 553 Y +QS+GNE NG+ P K+L G EYQRWF WGAAVF+D G A DNWS + +++GVG Sbjct: 495 YDFQSLGNEVNGSTLPAKFLLTGGVEYQRWFLPQWGAAVFWDTGTATDNWSQRRWFNGVG 554 Query: 554 TGARWRSPVGTLNLDLAYGIQKRQVRPHISLGIAF 588 G RW+SPVG + LDLAYGIQ+ Q RP ++LGIAF Sbjct: 555 VGVRWKSPVGPIQLDLAYGIQQHQFRPSVALGIAF 589 >B2UA30.1 B2UA30_RALPJ Surface antigen (D15) Length = 595 Score = 626 bits (1614), Expect = e-177, Method: Compositional matrix adjust. Identities = 314/580 (54%), Positives = 406/580 (70%), Gaps = 21/580 (3%) Query: 12 LWCAAEPAIAAYQVDIEAPKPVQSLLKDFLDLSRYQDRDDISDEQLKFMMDTAGEQVRDL 71 L CAA A A Y V I+APK ++ LL+ LDLSRY+DR DI+D+QL++M++T G+QV L Sbjct: 34 LACAA--AHAEYDVKIDAPKSIRDLLERHLDLSRYKDRKDITDDQLQYMVETIGDQVTKL 91 Query: 72 TATEGYFTPVTKVSEESAASKDGV---RRITVTVDPGPRTLVESAEISVTGSAASQDAAR 128 TATEGYF P ++ A DG R + V V+PGPRT +++ + TG A +QDA R Sbjct: 92 TATEGYFVP------KATAKLDGPPDHRVVNVKVEPGPRTTIDTVALDFTG-AITQDAKR 144 Query: 129 VAQLRTDWSLSRGEPFRQQDWDKAKNAGLATLQQKKYAAARIADSEARIDPQVQQADLSV 188 + +L+ WSL G FRQ WDKAK+ GLA LQ K+Y AAR S+AR+DP +ADLSV Sbjct: 145 IDELKKSWSLQHGMAFRQSGWDKAKDDGLAALQSKRYYAARQTSSQARVDPDENKADLSV 204 Query: 189 RYDSGPAFTLGALQITGTRRYPESIIRNVSPLIVGEPYDVDRLLALQRQIQNTPYFSNAI 248 YDSGPA+TLG L++ G RYP SII +V+PL VGE Y DRL +LQ IQ PYFSNAI Sbjct: 205 GYDSGPAYTLGPLEVQGLSRYPLSIINHVNPLRVGEDYSADRLQSLQAAIQGQPYFSNAI 264 Query: 249 VAIDDDPAHPDQTPVKVQVTEFPTQRIRTGVGYGTDTGAQAEGRYSHYNVFNRAYVFDSQ 308 V + DDP +P PV+V+V E+P RI GVGYGTDTGA EGRY + N+F++A+V D+Q Sbjct: 265 VDLGDDPKNPVNAPVRVRVREYPPNRITGGVGYGTDTGASLEGRYQYLNLFSKAWVLDTQ 324 Query: 309 LRLEQKRQYGLLSLAMPPDSKAFVNSINTAYDRTTLEGIDLRTQQVGLKRARNSDNYDTT 368 R+EQ+RQY + +PPD K +VNS T+ DRT G D R+ + G K+ R Y+T+ Sbjct: 325 ARIEQRRQYLFAGVTVPPDDKQYVNSFYTSMDRTDTSGTDTRSYRSGFKQTRVRGIYETS 384 Query: 369 YSLTYYRDELVQENGVTLPANTIVTPGKHRALVPGFAWSRRNVDNPIFPRHGNLLTLEAG 428 +++ +Y D+L + +G + +ALVPGFAW+RR+VD+P+FPR GN++T + G Sbjct: 385 FTVDFYYDDL-RPDGAERQLS--------KALVPGFAWTRRDVDDPLFPRRGNIITTQIG 435 Query: 429 VALKGVLTDQSFSRLYGRFKQFVPVGKRDIVVLRAELGGVFTAGRAGSVPASLLFRTGGN 488 A+KGVLTDQSF R Y R +QFVPVG+RDI V R ELG V TAG VPA+L FRTGG Sbjct: 436 AAVKGVLTDQSFVRSYSRIRQFVPVGQRDIFVARGELGAVITAGSGDGVPATLRFRTGGT 495 Query: 489 DSVRGYSYQSIGNEQNGTVYPTKYLAVGSTEYQRWFSENWGAAVFYDMGAAADNWSNKTF 548 SVRGY +QSIGN+ NG+ PTK+L G EYQRWF WGAAVF+D G A DNWS + + Sbjct: 496 QSVRGYDFQSIGNDVNGSTLPTKFLVTGGLEYQRWFLPQWGAAVFWDTGTATDNWSERRW 555 Query: 549 YHGVGTGARWRSPVGTLNLDLAYGIQKRQVRPHISLGIAF 588 ++GVG G RW+SPVG + LD+AYGIQ++Q RP +SLGIAF Sbjct: 556 FNGVGVGVRWKSPVGPIQLDMAYGIQQKQFRPSVSLGIAF 595 >E2T0K8.1 E2T0K8_9RALS Outer membrane protein, OMP85 family Length = 595 Score = 626 bits (1614), Expect = e-177, Method: Compositional matrix adjust. Identities = 314/580 (54%), Positives = 406/580 (70%), Gaps = 21/580 (3%) Query: 12 LWCAAEPAIAAYQVDIEAPKPVQSLLKDFLDLSRYQDRDDISDEQLKFMMDTAGEQVRDL 71 L CAA A A Y V I+APK ++ LL+ LDLSRY+DR DI+D+QL++M++T G+QV L Sbjct: 34 LACAA--AHAEYDVKIDAPKSIRDLLERHLDLSRYKDRKDITDDQLQYMVETIGDQVTKL 91 Query: 72 TATEGYFTPVTKVSEESAASKDGV---RRITVTVDPGPRTLVESAEISVTGSAASQDAAR 128 TATEGYF P ++ A DG R + V V+PGPRT +++ + TG A +QDA R Sbjct: 92 TATEGYFVP------KATAKLDGPPDHRVVNVKVEPGPRTTIDTVALDFTG-AITQDAKR 144 Query: 129 VAQLRTDWSLSRGEPFRQQDWDKAKNAGLATLQQKKYAAARIADSEARIDPQVQQADLSV 188 + +L+ WSL G FRQ WDKAK+ GLA LQ K+Y AAR S+AR+DP +ADLSV Sbjct: 145 IDELKKSWSLQHGMAFRQSGWDKAKDDGLAALQSKRYYAARQTSSQARVDPDENKADLSV 204 Query: 189 RYDSGPAFTLGALQITGTRRYPESIIRNVSPLIVGEPYDVDRLLALQRQIQNTPYFSNAI 248 YDSGPA+TLG L++ G RYP SII +V+PL VGE Y DRL +LQ IQ PYFSNAI Sbjct: 205 GYDSGPAYTLGPLEVQGLSRYPLSIINHVNPLRVGEDYSADRLQSLQAAIQGQPYFSNAI 264 Query: 249 VAIDDDPAHPDQTPVKVQVTEFPTQRIRTGVGYGTDTGAQAEGRYSHYNVFNRAYVFDSQ 308 V + DDP +P PV+V+V E+P RI GVGYGTDTGA EGRY + N+F++A+V D+Q Sbjct: 265 VDLGDDPKNPVNAPVRVRVREYPPNRITGGVGYGTDTGASLEGRYQYLNLFSKAWVLDTQ 324 Query: 309 LRLEQKRQYGLLSLAMPPDSKAFVNSINTAYDRTTLEGIDLRTQQVGLKRARNSDNYDTT 368 R+EQ+RQY + +PPD K +VNS T+ DRT G D R+ + G K+ R Y+T+ Sbjct: 325 ARIEQRRQYLFAGVTVPPDDKQYVNSFYTSMDRTDTSGTDTRSYRSGFKQTRVRGIYETS 384 Query: 369 YSLTYYRDELVQENGVTLPANTIVTPGKHRALVPGFAWSRRNVDNPIFPRHGNLLTLEAG 428 +++ +Y D+L + +G + +ALVPGFAW+RR+VD+P+FPR GN++T + G Sbjct: 385 FTVDFYYDDL-RPDGAERQLS--------KALVPGFAWTRRDVDDPLFPRRGNIITTQIG 435 Query: 429 VALKGVLTDQSFSRLYGRFKQFVPVGKRDIVVLRAELGGVFTAGRAGSVPASLLFRTGGN 488 A+KGVLTDQSF R Y R +QFVPVG+RDI V R ELG V TAG VPA+L FRTGG Sbjct: 436 AAVKGVLTDQSFVRSYSRIRQFVPVGQRDIFVARGELGAVITAGSGDGVPATLRFRTGGT 495 Query: 489 DSVRGYSYQSIGNEQNGTVYPTKYLAVGSTEYQRWFSENWGAAVFYDMGAAADNWSNKTF 548 SVRGY +QSIGN+ NG+ PTK+L G EYQRWF WGAAVF+D G A DNWS + + Sbjct: 496 QSVRGYDFQSIGNDVNGSTLPTKFLVTGGLEYQRWFLPQWGAAVFWDTGTATDNWSERRW 555 Query: 549 YHGVGTGARWRSPVGTLNLDLAYGIQKRQVRPHISLGIAF 588 ++GVG G RW+SPVG + LD+AYGIQ++Q RP +SLGIAF Sbjct: 556 FNGVGVGVRWKSPVGPIQLDMAYGIQQKQFRPSVSLGIAF 595 >D8N8F8.1 D8N8F8_RALSO Putative uncharacterized protein Length = 589 Score = 625 bits (1613), Expect = e-177, Method: Compositional matrix adjust. Identities = 310/579 (53%), Positives = 403/579 (69%), Gaps = 13/579 (2%) Query: 10 TLLWCAAEPAIAAYQVDIEAPKPVQSLLKDFLDLSRYQDRDDISDEQLKFMMDTAGEQVR 69 +L A A AAY+V IEAP+P++ LL LDL+RYQDR DI+D+QL++M++T GEQV Sbjct: 24 CVLSVACTAARAAYEVRIEAPRPLRDLLARHLDLARYQDRKDITDDQLQYMVETIGEQVA 83 Query: 70 DLTATEGYFTPVTKVSEESAASKDGVRRITVTVDPGPRTLVESAEISVTGSAASQDAARV 129 LTATEGYF P E + R + V V+ GPRT ++S + TG+ A Q+ R+ Sbjct: 84 KLTATEGYFVPKATAQLEGPPDR---RIVRVKVEAGPRTTIDSVALDFTGAIA-QEPKRI 139 Query: 130 AQLRTDWSLSRGEPFRQQDWDKAKNAGLATLQQKKYAAARIADSEARIDPQVQQADLSVR 189 L+ W L +G PFRQ WDKAK LA LQ K+Y AAR S+AR+DP +ADLSV Sbjct: 140 DALKKAWGLPQGAPFRQSGWDKAKEDSLAALQSKRYYAARQTASQARVDPDENKADLSVA 199 Query: 190 YDSGPAFTLGALQITGTRRYPESIIRNVSPLIVGEPYDVDRLLALQRQIQNTPYFSNAIV 249 YDSGPA+TLG L + G RYP SII +V+PLIVGE Y DRL AL IQ PYF+NAIV Sbjct: 200 YDSGPAYTLGPLDVQGLSRYPRSIIDHVNPLIVGEDYSADRLQALAAAIQGQPYFANAIV 259 Query: 250 AIDDDPAHPDQTPVKVQVTEFPTQRIRTGVGYGTDTGAQAEGRYSHYNVFNRAYVFDSQL 309 + DDP +P PV+V+V E+P RI +GVGY TDTGAQ EGRY + N+F++A+V D+Q Sbjct: 260 DLGDDPKNPVAAPVRVRVREYPPNRITSGVGYSTDTGAQVEGRYQYLNLFDKAWVLDTQA 319 Query: 310 RLEQKRQYGLLSLAMPPDSKAFVNSINTAYDRTTLEGIDLRTQQVGLKRARNSDNYDTTY 369 R+EQ+RQY S+ +PPD K +VNS+ + DRT L G D R+ + G K+ R Y+T++ Sbjct: 320 RIEQRRQYLFGSVTLPPDGKRYVNSLYGSLDRTNLSGTDTRSYRSGFKQTRARGIYETSF 379 Query: 370 SLTYYRDELVQENGVTLPANTIVTPGKHRALVPGFAWSRRNVDNPIFPRHGNLLTLEAGV 429 ++ +Y D+L + +G + +ALVPGFAW+RR+VD+P+FPR GN+LT + G Sbjct: 380 TIDFYYDDL-RPDGAARELS--------KALVPGFAWTRRDVDDPLFPRRGNILTTQIGA 430 Query: 430 ALKGVLTDQSFSRLYGRFKQFVPVGKRDIVVLRAELGGVFTAGRAGSVPASLLFRTGGND 489 A+KG+LTDQSF R Y R +Q+VPVG+RDI V RAELG V TAG A VPA+L FRTGG Sbjct: 431 AVKGLLTDQSFVRSYSRIRQYVPVGQRDIFVARAELGAVLTAGAADGVPATLRFRTGGTQ 490 Query: 490 SVRGYSYQSIGNEQNGTVYPTKYLAVGSTEYQRWFSENWGAAVFYDMGAAADNWSNKTFY 549 S+RGY +QSIGN+ NG+ PTK+L G EYQRWF WGAAVF+D G A DNW+ + ++ Sbjct: 491 SIRGYDFQSIGNDVNGSTLPTKFLITGGVEYQRWFLPQWGAAVFWDTGTATDNWTQRRWF 550 Query: 550 HGVGTGARWRSPVGTLNLDLAYGIQKRQVRPHISLGIAF 588 +GVG G RW+SPVG + LDLAYGIQ+ Q RP ++LGIAF Sbjct: 551 NGVGVGVRWKSPVGPIQLDLAYGIQQHQFRPSVALGIAF 589 >C6BBL1.1 C6BBL1_RALP1 Surface antigen (D15) Length = 595 Score = 625 bits (1612), Expect = e-177, Method: Compositional matrix adjust. Identities = 311/577 (53%), Positives = 400/577 (69%), Gaps = 15/577 (2%) Query: 12 LWCAAEPAIAAYQVDIEAPKPVQSLLKDFLDLSRYQDRDDISDEQLKFMMDTAGEQVRDL 71 L CA PA A Y V IEAPK ++ LL+ LDLSRY+DR DI+D+QL++M++T G+QV L Sbjct: 34 LICA--PAHAEYDVKIEAPKSIRDLLERHLDLSRYKDRKDITDDQLQYMVETIGDQVTKL 91 Query: 72 TATEGYFTPVTKVSEESAASKDGVRRITVTVDPGPRTLVESAEISVTGSAASQDAARVAQ 131 TATEGYF P E R + V V+PGPRT +++ + TG A +QDA R+ + Sbjct: 92 TATEGYFVPKATAKLEGPQDH---RIVNVKVEPGPRTTIDNVALDFTG-AVTQDAKRIDE 147 Query: 132 LRTDWSLSRGEPFRQQDWDKAKNAGLATLQQKKYAAARIADSEARIDPQVQQADLSVRYD 191 L+ WSL G FRQ WDKAK+ GLA LQ K+Y AA+ S+AR+DP +ADLSV YD Sbjct: 148 LKKSWSLQHGMAFRQAGWDKAKDDGLAALQSKRYYAAKQTSSQARVDPDESKADLSVGYD 207 Query: 192 SGPAFTLGALQITGTRRYPESIIRNVSPLIVGEPYDVDRLLALQRQIQNTPYFSNAIVAI 251 SGPA+TLG L + G RYP SII +V+PL VGE Y DRL +LQ IQ PYFSNAIV + Sbjct: 208 SGPAYTLGPLDVQGLSRYPLSIINHVNPLRVGEDYSADRLQSLQAAIQGQPYFSNAIVDL 267 Query: 252 DDDPAHPDQTPVKVQVTEFPTQRIRTGVGYGTDTGAQAEGRYSHYNVFNRAYVFDSQLRL 311 DDP +P PV+V+V E+P RI GVGYGTDTGA EGRY + N+F++A+V D+Q RL Sbjct: 268 GDDPKNPVNAPVRVRVREYPPNRITGGVGYGTDTGASLEGRYQYLNLFSKAWVLDTQARL 327 Query: 312 EQKRQYGLLSLAMPPDSKAFVNSINTAYDRTTLEGIDLRTQQVGLKRARNSDNYDTTYSL 371 EQ+RQY + +PPD K +VNS+ T+ DRT G + R+ + G K+ R Y+T++++ Sbjct: 328 EQRRQYLFAGVTVPPDDKQYVNSLYTSMDRTDTSGTETRSYRSGFKQTRVRGIYETSFTV 387 Query: 372 TYYRDELVQENGVTLPANTIVTPGKHRALVPGFAWSRRNVDNPIFPRHGNLLTLEAGVAL 431 +Y D+L E + +ALVPGFAW+RR+VD+P+FPR GN++T + G A+ Sbjct: 388 DFYYDDLRPEGAERQLS---------KALVPGFAWTRRDVDDPLFPRRGNIITTQIGAAV 438 Query: 432 KGVLTDQSFSRLYGRFKQFVPVGKRDIVVLRAELGGVFTAGRAGSVPASLLFRTGGNDSV 491 KGVLTDQSF R Y R +QFVPVG+RDI V R ELG V T+G VPA+L FRTGG SV Sbjct: 439 KGVLTDQSFVRSYSRIRQFVPVGQRDIFVARGELGAVITSGAGDGVPATLRFRTGGTQSV 498 Query: 492 RGYSYQSIGNEQNGTVYPTKYLAVGSTEYQRWFSENWGAAVFYDMGAAADNWSNKTFYHG 551 RGY +QSIGN+ NG+ PTK+L G EYQRWF WGAAVF+D G A DNWS + +++G Sbjct: 499 RGYDFQSIGNDVNGSTLPTKFLVTGGLEYQRWFLPQWGAAVFWDTGTATDNWSERRWFNG 558 Query: 552 VGTGARWRSPVGTLNLDLAYGIQKRQVRPHISLGIAF 588 VG G RW+SPVG + LD+AYGIQ++Q RP +SLGIAF Sbjct: 559 VGVGVRWKSPVGPIQLDMAYGIQQKQFRPSVSLGIAF 595 >Q474Y0.1 Q474Y0_CUPPJ Surface antigen (D15) Length = 612 Score = 625 bits (1612), Expect = e-177, Method: Compositional matrix adjust. Identities = 311/589 (52%), Positives = 404/589 (68%), Gaps = 22/589 (3%) Query: 8 AITLLWCAAEPAIAAYQVDIEAPKPVQSLLKDFLDLSRYQDRDDISDEQLKFMMDTAGEQ 67 A+ + W PA AAY+V++EAPKP++ +L++ LDLSRY+DR D+S Q +M++T G+Q Sbjct: 38 ALAVAWLL--PAQAAYKVEVEAPKPLREILENHLDLSRYKDRTDLSPNQFAYMVETVGDQ 95 Query: 68 VRDLTATEGYFTPVTKVSEESAASKDGVRRITVTVDPGPRTLVESAEISVTGSAASQDAA 127 VR +TEGYF PVT E K R + VTVDPG RT++ + +I V G AA++ Sbjct: 96 VRQFASTEGYFDPVTTARVEGEGDK---RVVHVTVDPGARTIIRNVDIKVDGPAATRSPE 152 Query: 128 RVAQLRTDWSLSRGEPFRQQDWDKAKNAGLATLQQKKYAAARIADSEARIDPQVQQADLS 187 +VA+++ W L G+PFRQ+DWDKAK L TLQ + Y AR+A S+ARI+P +ADLS Sbjct: 153 QVAEVQKKWGLPVGDPFRQEDWDKAKEDALVTLQSRSYFGARLAQSQARIEPDELRADLS 212 Query: 188 VRYDSGPAFTLGALQITGTRRYPESIIRNVSPLIVGEPYDVDRLLALQRQIQNTPYFSNA 247 RYDSGPA+ LG L+++GTRRYPE II NV+PL GEPY V+RLL LQR IQN PYFSN Sbjct: 213 ARYDSGPAYLLGPLRVSGTRRYPEQIIYNVNPLNEGEPYRVERLLELQRAIQNQPYFSNV 272 Query: 248 ---IVAIDDDPAHPDQ----TPVKVQVTEFPTQRIRTGVGYGTDTGAQAEGRYSHYNVFN 300 +V + A+P PV V+V E+P R+ +GVG+ TDTGAQ EGRYS+YN+FN Sbjct: 273 QVDLVTPEGTAANPPDGVVTAPVSVKVREYPEHRLNSGVGFTTDTGAQVEGRYSYYNLFN 332 Query: 301 RAYVFDSQLRLEQKRQYGLLSLAMPPDSKAFVNSINTAYDRTT-LEGIDLRTQQVGLKRA 359 RA+VFDSQ R+EQKR Y AMPPD F NSI ++Y+RT LE D + + GLKR+ Sbjct: 333 RAWVFDSQARIEQKRSYLFAETAMPPDRSTFRNSIYSSYERTIDLENTDTTSWRAGLKRS 392 Query: 360 RNSDNYDTTYSLTYYRDELVQENGVTLPANTIVTPGKHRALVPGFAWSRRNVDNPIFPRH 419 R+ + YD T SL +Y D L+ E + +ALVP FAW+RR+VDNP+FPR Sbjct: 393 RSREKYDITMSLDFYYDNLLPEGQQAQIS---------KALVPAFAWTRRDVDNPVFPRR 443 Query: 420 GNLLTLEAGVALKGVLTDQSFSRLYGRFKQFVPVGKRDIVVLRAELGGVFTAGRAGSVPA 479 GN+++ + GVA KG+L+D +F R+YGR +Q+VPVG RD+ V R ELG T + +PA Sbjct: 444 GNVISTQLGVAAKGLLSDATFFRMYGRIRQYVPVGNRDLFVARLELGANMTTADSSKIPA 503 Query: 480 SLLFRTGGNDSVRGYSYQSIGNEQNGTVYPTKYLAVGSTEYQRWFSENWGAAVFYDMGAA 539 +L FR GG DS+RGYSYQSIG +V P KYLA G EYQ WF WG AVF+D G A Sbjct: 504 TLRFRAGGTDSIRGYSYQSIGTPSGSSVLPAKYLATGGLEYQYWFKPEWGVAVFWDAGTA 563 Query: 540 ADNWSNKTFYHGVGTGARWRSPVGTLNLDLAYGIQKRQVRPHISLGIAF 588 AD ++ Y+GVG GARWRSPVG + LD+ YG+QK+Q RPHISLG+AF Sbjct: 564 ADALNDVKIYNGVGIGARWRSPVGPVQLDVGYGVQKQQFRPHISLGVAF 612 >B5SHZ4.1 B5SHZ4_RALSO Outer membrane protein Length = 589 Score = 624 bits (1609), Expect = e-176, Method: Compositional matrix adjust. Identities = 314/578 (54%), Positives = 405/578 (70%), Gaps = 21/578 (3%) Query: 14 CAAEPAIAAYQVDIEAPKPVQSLLKDFLDLSRYQDRDDISDEQLKFMMDTAGEQVRDLTA 73 C A A AAY+V IEAPKP++ LL+ LDL+RYQDR DI+D+QL++M++T GEQV LTA Sbjct: 30 CTA--ARAAYEVRIEAPKPLRDLLERHLDLARYQDRKDITDDQLQYMVETIGEQVAKLTA 87 Query: 74 TEGYFTPVTKVSEESAASKDGV--RRIT-VTVDPGPRTLVESAEISVTGSAASQDAARVA 130 TEGYF P ++ A DG RRI V V+ GPRT ++S ++ TG A +QD R+ Sbjct: 88 TEGYFVP------KATAQLDGPPERRIVRVQVEAGPRTTIDSVALAFTG-AITQDPKRID 140 Query: 131 QLRTDWSLSRGEPFRQQDWDKAKNAGLATLQQKKYAAARIADSEARIDPQVQQADLSVRY 190 +L+ W L +G PFRQ WDKAK+ LA LQ K+Y AAR S+AR+DP +ADLSV Y Sbjct: 141 ELKKAWGLPQGAPFRQSSWDKAKDDNLAALQGKRYYAARRTASQARVDPDASKADLSVAY 200 Query: 191 DSGPAFTLGALQITGTRRYPESIIRNVSPLIVGEPYDVDRLLALQRQIQNTPYFSNAIVA 250 DSGPA+TLG L + G RYP SII +V+PL VG+ Y DRL L IQ PYF+NAIV Sbjct: 201 DSGPAYTLGPLDVQGLSRYPRSIIDHVNPLRVGDDYSADRLQGLAAAIQGQPYFANAIVD 260 Query: 251 IDDDPAHPDQTPVKVQVTEFPTQRIRTGVGYGTDTGAQAEGRYSHYNVFNRAYVFDSQLR 310 + DDP +P PV+V+V E+P RI +GVGYGTDTGAQ EGRY + N+F++A+V D+Q R Sbjct: 261 LGDDPKNPVAAPVRVRVREYPPNRITSGVGYGTDTGAQVEGRYQYLNLFDKAWVLDTQAR 320 Query: 311 LEQKRQYGLLSLAMPPDSKAFVNSINTAYDRTTLEGIDLRTQQVGLKRARNSDNYDTTYS 370 +EQ+RQY S+ +PPD + +VNS+ + DRT L G D R+ + G K+ R Y+T+++ Sbjct: 321 IEQRRQYLFGSVTLPPDDQRYVNSLYGSLDRTNLSGTDTRSYRSGFKQTRVRGIYETSFT 380 Query: 371 LTYYRDELVQENGVTLPANTIVTPGKHRALVPGFAWSRRNVDNPIFPRHGNLLTLEAGVA 430 + YY D+L E +ALVPGFAW+RR+VD+P+FPR GN+LT + G A Sbjct: 381 IDYYYDDLRPEGAAR---------ELSKALVPGFAWTRRDVDDPLFPRRGNILTTQIGAA 431 Query: 431 LKGVLTDQSFSRLYGRFKQFVPVGKRDIVVLRAELGGVFTAGRAGSVPASLLFRTGGNDS 490 +KG+LTDQSF R Y R +Q+VPVG+RDI+V RAELG V TAG A VPA+L FRTGG S Sbjct: 432 VKGLLTDQSFVRSYSRIRQYVPVGQRDILVARAELGAVLTAGAADGVPATLRFRTGGTQS 491 Query: 491 VRGYSYQSIGNEQNGTVYPTKYLAVGSTEYQRWFSENWGAAVFYDMGAAADNWSNKTFYH 550 VRGY +QS+GNE NG+ P K+L G EYQRWF WGAAV +D G A DNWS + +++ Sbjct: 492 VRGYDFQSLGNEVNGSTLPAKFLLTGGVEYQRWFLPQWGAAVLWDTGTATDNWSQRRWFN 551 Query: 551 GVGTGARWRSPVGTLNLDLAYGIQKRQVRPHISLGIAF 588 GVG G RW+SPVG + LDLAYGIQ+ Q RP ++LGIAF Sbjct: 552 GVGVGVRWKSPVGPIQLDLAYGIQQHQFRPSVALGIAF 589 >A3RRV7.1 A3RRV7_RALSO Outer membrane protein Length = 589 Score = 624 bits (1609), Expect = e-176, Method: Compositional matrix adjust. Identities = 314/578 (54%), Positives = 405/578 (70%), Gaps = 21/578 (3%) Query: 14 CAAEPAIAAYQVDIEAPKPVQSLLKDFLDLSRYQDRDDISDEQLKFMMDTAGEQVRDLTA 73 C A A AAY+V IEAPKP++ LL+ LDL+RYQDR DI+D+QL++M++T GEQV LTA Sbjct: 30 CTA--ARAAYEVRIEAPKPLRDLLERHLDLARYQDRKDITDDQLQYMVETIGEQVAKLTA 87 Query: 74 TEGYFTPVTKVSEESAASKDGV--RRIT-VTVDPGPRTLVESAEISVTGSAASQDAARVA 130 TEGYF P ++ A DG RRI V V+ GPRT ++S ++ TG A +QD R+ Sbjct: 88 TEGYFVP------KATAQLDGPPERRIVRVQVEAGPRTTIDSVALAFTG-AITQDPKRID 140 Query: 131 QLRTDWSLSRGEPFRQQDWDKAKNAGLATLQQKKYAAARIADSEARIDPQVQQADLSVRY 190 +L+ W L +G PFRQ WDKAK+ LA LQ K+Y AAR S+AR+DP +ADLSV Y Sbjct: 141 ELKKAWGLPQGAPFRQSSWDKAKDDNLAALQGKRYYAARRTASQARVDPDASKADLSVAY 200 Query: 191 DSGPAFTLGALQITGTRRYPESIIRNVSPLIVGEPYDVDRLLALQRQIQNTPYFSNAIVA 250 DSGPA+TLG L + G RYP SII +V+PL VG+ Y DRL L IQ PYF+NAIV Sbjct: 201 DSGPAYTLGPLDVQGLSRYPRSIIDHVNPLRVGDDYSADRLQGLAAAIQGQPYFANAIVD 260 Query: 251 IDDDPAHPDQTPVKVQVTEFPTQRIRTGVGYGTDTGAQAEGRYSHYNVFNRAYVFDSQLR 310 + DDP +P PV+V+V E+P RI +GVGYGTDTGAQ EGRY + N+F++A+V D+Q R Sbjct: 261 LGDDPKNPVAAPVRVRVREYPPNRITSGVGYGTDTGAQVEGRYQYLNLFDKAWVLDTQAR 320 Query: 311 LEQKRQYGLLSLAMPPDSKAFVNSINTAYDRTTLEGIDLRTQQVGLKRARNSDNYDTTYS 370 +EQ+RQY S+ +PPD + +VNS+ + DRT L G D R+ + G K+ R Y+T+++ Sbjct: 321 IEQRRQYLFGSVTLPPDDQRYVNSLYGSLDRTNLSGTDTRSYRSGFKQTRVRGIYETSFT 380 Query: 371 LTYYRDELVQENGVTLPANTIVTPGKHRALVPGFAWSRRNVDNPIFPRHGNLLTLEAGVA 430 + YY D+L E +ALVPGFAW+RR+VD+P+FPR GN+LT + G A Sbjct: 381 IDYYYDDLRPEGAAR---------ELSKALVPGFAWTRRDVDDPLFPRRGNILTTQIGAA 431 Query: 431 LKGVLTDQSFSRLYGRFKQFVPVGKRDIVVLRAELGGVFTAGRAGSVPASLLFRTGGNDS 490 +KG+LTDQSF R Y R +Q+VPVG+RDI+V RAELG V TAG A VPA+L FRTGG S Sbjct: 432 VKGLLTDQSFVRSYSRIRQYVPVGQRDILVARAELGAVLTAGAADGVPATLRFRTGGTQS 491 Query: 491 VRGYSYQSIGNEQNGTVYPTKYLAVGSTEYQRWFSENWGAAVFYDMGAAADNWSNKTFYH 550 VRGY +QS+GNE NG+ P K+L G EYQRWF WGAAV +D G A DNWS + +++ Sbjct: 492 VRGYDFQSLGNEVNGSTLPAKFLLTGGVEYQRWFLPQWGAAVLWDTGTATDNWSQRRWFN 551 Query: 551 GVGTGARWRSPVGTLNLDLAYGIQKRQVRPHISLGIAF 588 GVG G RW+SPVG + LDLAYGIQ+ Q RP ++LGIAF Sbjct: 552 GVGVGVRWKSPVGPIQLDLAYGIQQHQFRPSVALGIAF 589