BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0029.0057.p (465 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value D8IPY6.1 D8IPY6_HERSS Two component sensor histidine kinase prot... 933 0.0 F1VZN9.1 F1VZN9_9BURK Signal transduction histidine kinase 514 e-143 E6QQD6.1 E6QQD6_9ZZZZ Putative two-component sensor histidine ki... 472 e-131 B8L307.1 B8L307_9GAMM Periplasmic sensor signal transduction his... 311 2e-82 B2FIE1.1 B2FIE1_STRMK Putative two-component system, sensor hist... 309 6e-82 B4SQ57.1 B4SQ57_STRM5 Integral membrane sensor signal transducti... 306 4e-81 D5CMB0.1 D5CMB0_SIDLE Integral membrane sensor signal transducti... 289 6e-76 Q11E92.1 Q11E92_MESSB Periplasmic sensor signal transduction his... 279 8e-73 B4W9K2.1 B4W9K2_9CAUL ATPase, histidine kinase-, DNA gyrase B-, ... 271 2e-70 Q5P209.1 Q5P209_AROAE Predicted histidine kinase-like ATPase 269 7e-70 >D8IPY6.1 D8IPY6_HERSS Two component sensor histidine kinase protein EC=2.7.3.- Length = 465 Score = 933 bits (2411), Expect = 0.0, Method: Compositional matrix adjust. Identities = 461/465 (99%), Positives = 464/465 (99%) Query: 1 MKNFLGSIGNRIFFLLLGGIVVAVFATNWLAGNERRNTLRELRFQHLADRVEQIVQAVDN 60 MKNFLGSIGNRIFFLLLGGIVVAVFATNWLAGNERRNTLRELRFQHLADRVEQIVQAVDN Sbjct: 1 MKNFLGSIGNRIFFLLLGGIVVAVFATNWLAGNERRNTLRELRFQHLADRVEQIVQAVDN 60 Query: 61 IPPAQRPIVLQAASNFGFEARMVEDMNEAIGPNASPSPSTSPLTEMLQARLGEDRKIAVQ 120 IPPAQRPIVLQAASNFGFEARMVEDMN+AIGP+ASPSPSTSPLTEMLQARLGEDRKIAVQ Sbjct: 61 IPPAQRPIVLQAASNFGFEARMVEDMNDAIGPDASPSPSTSPLTEMLQARLGEDRKIAVQ 120 Query: 121 RESECPPLRTDDPRAPRRDTCRVIYISLHDQALMRLRLHQPGEPPALRARAGPGGPASLF 180 RESECPPLRTDD RAPRRDTCRVIYISLHDQALMRLRLHQPGEPPALRARAGPGGPASLF Sbjct: 121 RESECPPLRTDDARAPRRDTCRVIYISLHDQALMRLRLHQPGEPPALRARAGPGGPASLF 180 Query: 181 GLQYILLFLVLIAMLAWLVARMATRPIRQLAQAASRLGSDIDHAPLAETGPTEIRQAAHA 240 GLQYILLFLVLIAMLAWLVARMATRPIRQLAQAASRLGSDIDHAPLAETGPTEIRQAAHA Sbjct: 181 GLQYILLFLVLIAMLAWLVARMATRPIRQLAQAASRLGSDIDHAPLAETGPTEIRQAAHA 240 Query: 241 FNAMQARIRRQIQHRTHMLAAITHDLQTPLTRMRLRLEKVSDPGLQQKLIDDLGVMHGMV 300 FNAMQARIRRQIQHRTHMLAAITHDLQTPLTRMRLRLEKVSDPGLQQKLIDDLGVMHGMV Sbjct: 241 FNAMQARIRRQIQHRTHMLAAITHDLQTPLTRMRLRLEKVSDPGLQQKLIDDLGVMHGMV 300 Query: 301 REGLDLARSMDSSEKIQALDIDSLLDSVCADAADAGQDVALQGSTRAFVMAQPGALRRCL 360 REGLDLARSMDSSEKIQALDIDSLLDSVCADAADAGQDVALQGSTRAFVMAQPGALRRCL Sbjct: 301 REGLDLARSMDSSEKIQALDIDSLLDSVCADAADAGQDVALQGSTRAFVMAQPGALRRCL 360 Query: 361 TNLIDNACKYGKSARVSIALEQQKIAIRIRDQGPGIPESELEAVFEPFYRLEASRSRDTG 420 TNLIDNACKYGKSARVSIALEQQKIAIRIRDQGPGIPESELEAVFEPFYRLEASRSRDTG Sbjct: 361 TNLIDNACKYGKSARVSIALEQQKIAIRIRDQGPGIPESELEAVFEPFYRLEASRSRDTG 420 Query: 421 GTGLGLTIALNIAENHHGQLRLRNLAKGGLEVLLELPPMTPAKNR 465 GTGLGLTIALNIAENHHGQLRLRNLA+GGLEVLLELPPMTPAKNR Sbjct: 421 GTGLGLTIALNIAENHHGQLRLRNLAEGGLEVLLELPPMTPAKNR 465 >F1VZN9.1 F1VZN9_9BURK Signal transduction histidine kinase Length = 457 Score = 514 bits (1324), Expect = e-143, Method: Compositional matrix adjust. Identities = 272/459 (59%), Positives = 330/459 (71%), Gaps = 14/459 (3%) Query: 1 MKNFLGSIGNRIFFLLLGGIVVAVFATNWLAGNERRNTLRELRFQHLADRVEQIVQAVDN 60 MKNFLGSI NR+F +LL GI+VA T LA ER + ++R H A+RV Q+V A+D Sbjct: 1 MKNFLGSIANRVFVILLAGILVATGVTAMLAEREREGAMNQMRLNHSAERVVQLVVALDQ 60 Query: 61 IPPAQRPIVLQAASNFGFEARMVEDMNEAIGPNASPSPSTSPLTEMLQARLGEDRKIAVQ 120 P RP++LQ A+NFG A M +D+ EA+G S L ++L++RLG R+I ++ Sbjct: 61 AAPEVRPVILQTATNFGVAASMADDL-EALGG------SDGALVDLLKSRLGLHRQIVLK 113 Query: 121 RESECPPLRTDDPRAPRRD--TCRVIYISLHDQALMRLRLHQPGEPPALRARAGPGGPAS 178 +++ C P PR R + C+ + + L D L+R++L G + + G P++ Sbjct: 114 QQTGCQPRLARLPRFERANPGDCQSVLVGLSDGQLLRVQLRPGGSTGGGKDKPPLGLPSA 173 Query: 179 LFGLQYILLFLVLIAMLAWLVARMATRPIRQLAQAASRLGSDIDHAPLAETGPTEIRQAA 238 Y+ LFL LI +LAWLVARM RPIRQLA+AA LGSD+D APL ETGPTEIRQAA Sbjct: 174 -----YLALFLTLIGLLAWLVARMTARPIRQLAEAAGALGSDLDRAPLPETGPTEIRQAA 228 Query: 239 HAFNAMQARIRRQIQHRTHMLAAITHDLQTPLTRMRLRLEKVSDPGLQQKLIDDLGVMHG 298 AFNAMQARIRRQ+QHRTHMLAAITHDLQTPLTR+RLRLEKV D L+ KLIDDLGVM Sbjct: 229 SAFNAMQARIRRQVQHRTHMLAAITHDLQTPLTRLRLRLEKVGDDELRTKLIDDLGVMQS 288 Query: 299 MVREGLDLARSMDSSEKIQALDIDSLLDSVCADAADAGQDVALQGSTRAFVMAQPGALRR 358 MVREGL+LARSMDS E +Q LD+DSL+DSVCADA DAGQDV L G + VMAQP ALRR Sbjct: 289 MVREGLELARSMDSQEPLQRLDLDSLIDSVCADATDAGQDVELLGPSGVRVMAQPNALRR 348 Query: 359 CLTNLIDNACKYGKSARVSIALEQQKIAIRIRDQGPGIPESELEAVFEPFYRLEASRSRD 418 CLTNL+DNA KYG+ ARVS+ EQ+++ IRIRD GPG+P +LEAVF+PF+RLE SRSRD Sbjct: 349 CLTNLLDNAIKYGRLARVSVVREQERVVIRIRDAGPGLPPDQLEAVFDPFFRLETSRSRD 408 Query: 419 TGGTGLGLTIALNIAENHHGQLRLRNLAKGGLEVLLELP 457 TGGTGLGLTIA NI E H G L L N A GGLE L LP Sbjct: 409 TGGTGLGLTIARNIIEAHGGTLVLANPAGGGLEATLALP 447 >E6QQD6.1 E6QQD6_9ZZZZ Putative two-component sensor histidine kinase Length = 456 Score = 472 bits (1214), Expect = e-131, Method: Compositional matrix adjust. Identities = 258/471 (54%), Positives = 318/471 (67%), Gaps = 29/471 (6%) Query: 1 MKNFLGSIGNRIFFLLLGGIVVAVFATNWLAGNERRNTLRELRFQHLADRVEQIVQAVDN 60 M+ F SI NR+F +LL G++ AV T+WLA N RN L EL +ADRVEQIV ++D Sbjct: 1 MRRFFDSIANRVFLILLAGMLFAVGITSWLADNTHRNVLLELHNFRVADRVEQIVLSLDQ 60 Query: 61 IPPAQRPIVLQAASNFGFEARMVEDMNEAIGPNASPSPSTSPLTEMLQARLGEDRKIAVQ 120 P R +Q +++FG +A++V D A N S L +L++RLG + + V Sbjct: 61 ATPEMRKAAMQTSADFGLQAQLVHDAGHAQAEN-------SALAMLLKSRLGTNHHVIVS 113 Query: 121 RESECPPLRTDDPRA--------PRRDTCRVIYISLHDQALMRLRLHQPGEPPALRARAG 172 ++ C RA PR + C+V+Y+SL D AL+ L+ P +R Sbjct: 114 TQTGCHLDINKRLRAQPGIARELPRINQCQVVYVSLKDGALLELKF------PMIRELWE 167 Query: 173 PGGPASLFGLQYILLFLVLIAMLAWLVARMATRPIRQLAQAASRLGSDIDHAPLAETG-P 231 P + Y LFL+LIA+LA++VA M RPI++L++AA+ LG DID PL +TG P Sbjct: 168 REHP---LYMPYFTLFLMLIALLAYVVASMVARPIKRLSEAAAELGHDIDQPPLQDTGGP 224 Query: 232 TEIRQAAHAFNAMQARIRRQIQHRTHMLAAITHDLQTPLTRMRLRLEKVSDPGLQQKLID 291 EIRQAAHAFNAMQARI+RQIQHRTHMLAAITHDLQTPLTR+RLR+EKV+D L+ KLI Sbjct: 225 LEIRQAAHAFNAMQARIKRQIQHRTHMLAAITHDLQTPLTRLRLRMEKVNDEDLRYKLIS 284 Query: 292 DLGVMHGMVREGLDLARSMDSSEKIQALDIDSLLDSVCADAADAGQDVALQGSTRAFVMA 351 DL M MVREGLDLARSMDS+E +Q LDIDSLLDS+CADA + GQDV L+G + ++A Sbjct: 285 DLAGMQNMVREGLDLARSMDSAEMMQRLDIDSLLDSLCADAVEMGQDVTLEGHAQVSILA 344 Query: 352 QPGALRRCLTNLIDNACKYGKSARVSIALE----QQKIAIRIRDQGPGIPESELEAVFEP 407 QP ALRRCLTNL+DNA KYG ARV I+LE Q + IRIRD G GI E +L VFEP Sbjct: 345 QPHALRRCLTNLLDNAVKYGHYARVQISLENGSGQGYVEIRIRDGGQGISEEQLIKVFEP 404 Query: 408 FYRLEASRSRDTGGTGLGLTIALNIAENHHGQLRLRNLAKGGLEVLLELPP 458 F RLE SRSRDTGGTGLGLTIA NIAENH L LRN +GGLEV+L L P Sbjct: 405 FVRLEVSRSRDTGGTGLGLTIARNIAENHRASLILRNHPEGGLEVILRLLP 455 >B8L307.1 B8L307_9GAMM Periplasmic sensor signal transduction histidine kinase Length = 469 Score = 311 bits (796), Expect = 2e-82, Method: Compositional matrix adjust. Identities = 192/474 (40%), Positives = 275/474 (58%), Gaps = 37/474 (7%) Query: 1 MKNFLGSIGNRIFFLLLGGIVVAVFATNWLAGNERRNTLRELRFQHLADRVEQIVQAVDN 60 +++FL S+ R+F +LL G+ VA LA ++R+ +ADR++ V +D Sbjct: 4 LRHFLSSMVGRLFVILLLGMSVAAIGATMLATSKRQQEFERQNLNRIADRLQGYVNLLDG 63 Query: 61 IPPAQRPIVLQAASNFGFEARMVEDMNEAIGPNASPSPSTSPLTEMLQARLGEDRKIAVQ 120 P + ++ + A+ P A + + L E+L R G + V Sbjct: 64 NPELRERLLEVGGPSV-----------RALLPGARLGRADTALMEVLDDRPGPVSRAHVH 112 Query: 121 RES--ECPPLRTDDP--------RAPR-RD------TCRVIYISLHDQALMRLRLHQPGE 163 S C P D + PR RD CR + ++L+D L++L L P Sbjct: 113 FTSFRSCIPKLQDLLPPPPPGHRKHPRERDPAFIPPKCRAVDVTLNDGTLLKLALDSP-- 170 Query: 164 PPALRARAGPGGPASLFGLQYILLFLVLIAMLAWLVARMATRPIRQLAQAASRLGSDIDH 223 A A G A ++ L ++ IA+LA++VARMA+ P+++LA AA LG D+ Sbjct: 171 -----AVAHNGILA--VDPWFLTLLVLAIAVLAYIVARMASAPLQELAAAAEDLGDDLQR 223 Query: 224 APLAETGPTEIRQAAHAFNAMQARIRRQIQHRTHMLAAITHDLQTPLTRMRLRLEKVSDP 283 PL GP E+++AA AFNAMQ R++R + RT MLAAITHDLQTPLTR+RLRLE V+D Sbjct: 224 DPLPLRGPREVQRAAEAFNAMQHRLQRHLAERTQMLAAITHDLQTPLTRLRLRLENVTDE 283 Query: 284 GLQQKLIDDLGVMHGMVREGLDLARSMDSSEKIQALDIDSLLDSVCADAADAGQDVALQG 343 L+++LI DL M +VREGL+LARS +S+E+ ALD+DSLL+S+ DAA+ G DV +G Sbjct: 284 VLRERLIGDLAAMQALVREGLELARSAESAEQRAALDLDSLLESIVEDAAEGGADVVFEG 343 Query: 344 STRAFVMAQPGALRRCLTNLIDNACKYGKSARVSIALEQQKIAIRIRDQGPGIPESELEA 403 T A +M +P A+ R +NL+DNA Y + RV + I + + D GPG+ E +LEA Sbjct: 344 GTGAVLMLRPLAMHRLFSNLVDNAVMYAQRVRVRVERSGGAITVMVADDGPGLAEDQLEA 403 Query: 404 VFEPFYRLEASRSRDTGGTGLGLTIALNIAENHHGQLRLRNLAKGGLEVLLELP 457 VF+PF R+E SRSR+TGG GLGLTIA +AE +L LRN A+GGLE +++ P Sbjct: 404 VFDPFVRVETSRSRETGGAGLGLTIARALAEKDGARLWLRNRAEGGLEAVVQWP 457 >B2FIE1.1 B2FIE1_STRMK Putative two-component system, sensor histidine kinase transcriptional regulatory protein Length = 469 Score = 309 bits (792), Expect = 6e-82, Method: Compositional matrix adjust. Identities = 191/474 (40%), Positives = 270/474 (56%), Gaps = 37/474 (7%) Query: 1 MKNFLGSIGNRIFFLLLGGIVVAVFATNWLAGNERRNTLRELRFQHLADRVEQIVQAVDN 60 +++FL S+ R+F +LL G+ VA LA ++R+ +ADR++ V +D Sbjct: 4 LRHFLSSMVGRLFVILLLGMSVAAIGATMLATSKRQQEFERQNLNRIADRLQGYVNLLDG 63 Query: 61 IPPAQRPIVLQAASNFGFEARMVEDMNEAIGPNASPSPSTSPLTEMLQARLGEDRKIAVQ 120 P + ++ + A+ P A + + L E+L R G + V Sbjct: 64 NPELRERLLEIGGPSV-----------RALQPGARLGRADTALMEVLDDRPGPVSRAHVH 112 Query: 121 RES--ECPPLRTD---------DPRAPRRD------TCRVIYISLHDQALMRLRLHQPGE 163 S C P D RD CR + ++L+D L++L L P Sbjct: 113 FTSFRSCIPKLQDLLPPPPPGHRRHPRERDPAFIPPKCRAVDVTLNDGTLLKLALDSP-- 170 Query: 164 PPALRARAGPGGPASLFGLQYILLFLVLIAMLAWLVARMATRPIRQLAQAASRLGSDIDH 223 A A G A ++ L ++ IA+LA++VARMA+ P+++LA AA LG D+ Sbjct: 171 -----AVAHNGILA--VDPWFLTLLVLAIAVLAYIVARMASAPLQELAAAAEDLGDDLQR 223 Query: 224 APLAETGPTEIRQAAHAFNAMQARIRRQIQHRTHMLAAITHDLQTPLTRMRLRLEKVSDP 283 PL GP E+++AA AFNAMQ R++R + RT MLAAITHDLQTPLTR+RLRLE VSD Sbjct: 224 DPLPLRGPREVQRAAEAFNAMQHRLQRHLAERTQMLAAITHDLQTPLTRLRLRLENVSDE 283 Query: 284 GLQQKLIDDLGVMHGMVREGLDLARSMDSSEKIQALDIDSLLDSVCADAADAGQDVALQG 343 L+++LI DL M +VREGL+LARS +S+E+ ALD+DSLL+S+ DAA+ G DV +G Sbjct: 284 VLRERLIGDLAAMQALVREGLELARSAESAEQRAALDLDSLLESIVEDAAEGGADVVFEG 343 Query: 344 STRAFVMAQPGALRRCLTNLIDNACKYGKSARVSIALEQQKIAIRIRDQGPGIPESELEA 403 T A +M +P A+ R +NL+DNA Y RV + I + D GPG+ E +LEA Sbjct: 344 GTGAVLMLRPLAMHRLFSNLVDNAVMYAHRVRVRVERSGGTITAMVSDDGPGLAEDQLEA 403 Query: 404 VFEPFYRLEASRSRDTGGTGLGLTIALNIAENHHGQLRLRNLAKGGLEVLLELP 457 VF+PF R+E SRSR+TGG GLGLTIA +AE +L LRN A+GGLE +++ P Sbjct: 404 VFDPFVRVETSRSRETGGAGLGLTIARALAEKDGARLWLRNRAEGGLEAVVQWP 457 >B4SQ57.1 B4SQ57_STRM5 Integral membrane sensor signal transduction histidine kinase Length = 469 Score = 306 bits (785), Expect = 4e-81, Method: Compositional matrix adjust. Identities = 185/474 (39%), Positives = 267/474 (56%), Gaps = 37/474 (7%) Query: 1 MKNFLGSIGNRIFFLLLGGIVVAVFATNWLAGNERRNTLRELRFQHLADRVEQIVQAVDN 60 +++F+ S+ R+F +LL G+ VA LA ++R+ +ADR++ V +D Sbjct: 4 LRHFMSSMVGRLFVILLLGMSVAAIGATMLATSKRQQEFERQNLNRIADRLQGYVNLLDG 63 Query: 61 IPPAQRPIVLQAASNFGFEARMVEDMNEAIGPNASPSPSTSPLTEMLQARLGEDRKIAVQ 120 P + ++ + A+ P A + + L E+L R G + V Sbjct: 64 NPELRERLLEIGGPSV-----------RALQPGARLGRADTALMEVLDDRPGPVSRAHVH 112 Query: 121 RES--ECPPLRTD---------DPRAPRRD------TCRVIYISLHDQALMRLRLHQPGE 163 S C P D RD CR + ++L+D L++L L P Sbjct: 113 FASFRSCIPKLQDLLPPPPPGHRRHPRERDPAFIPPKCRAVDVTLNDGTLLKLALDSPAV 172 Query: 164 PPALRARAGPGGPASLFGLQYILLFLVLIAMLAWLVARMATRPIRQLAQAASRLGSDIDH 223 P ++ L ++ IA+LA++VARMA+ P+++LA AA LG D+ Sbjct: 173 AHNGILAVDP---------WFLTLLVLAIAILAYIVARMASAPLQELAAAAEDLGDDLQR 223 Query: 224 APLAETGPTEIRQAAHAFNAMQARIRRQIQHRTHMLAAITHDLQTPLTRMRLRLEKVSDP 283 PL GP E+++AA AFNAMQ R++R + RT MLAAITHDLQTPLTR+RLRLE VSD Sbjct: 224 DPLPLRGPREVQRAAEAFNAMQHRLQRHLAERTQMLAAITHDLQTPLTRLRLRLENVSDE 283 Query: 284 GLQQKLIDDLGVMHGMVREGLDLARSMDSSEKIQALDIDSLLDSVCADAADAGQDVALQG 343 L+++LI DL M +VREGL+LARS +S+E+ ALD+DSLL+S+ D A+ G DV +G Sbjct: 284 TLRERLIGDLAAMQALVREGLELARSAESAEQRAALDLDSLLESIVEDTAEGGGDVVFEG 343 Query: 344 STRAFVMAQPGALRRCLTNLIDNACKYGKSARVSIALEQQKIAIRIRDQGPGIPESELEA 403 + A +M +P A+ R +NL+DNA Y RV + I + + D GPG+ E +LEA Sbjct: 344 GSGAVLMLRPLAMHRLFSNLVDNAVMYAYRVRVRVERSGGAITVVVADDGPGLAEDQLEA 403 Query: 404 VFEPFYRLEASRSRDTGGTGLGLTIALNIAENHHGQLRLRNLAKGGLEVLLELP 457 VF+PF R+E SRSR+TGG GLGLTIA +AE +L LRN A+GGLE +++ P Sbjct: 404 VFDPFVRVETSRSRETGGAGLGLTIARALAEKDGARLWLRNRAEGGLEAVVQWP 457 >D5CMB0.1 D5CMB0_SIDLE Integral membrane sensor signal transduction histidine kinase Length = 445 Score = 289 bits (740), Expect = 6e-76, Method: Compositional matrix adjust. Identities = 197/462 (42%), Positives = 274/462 (59%), Gaps = 23/462 (4%) Query: 1 MKNFLGSIGNRIFFLLLGGIVVAVFATNWLAGNERRNTLRELRFQHLADRVEQIVQAVDN 60 M S+ R+F +LL G++V T L + ++ +R QHLA + ++V+ ++ Sbjct: 1 MFAIFHSMHGRLFLILLVGMIVTSIGTVLLTHSRQQELYERVRAQHLATDITELVETLEI 60 Query: 61 IPPAQRPIVLQAASNFGFEARMVEDMNEAIGPNASPSPSTSPLTEMLQARLGEDRKIAVQ 120 P R L G + +E I P + + + L+ RL ++ Sbjct: 61 TPLPLRDDFLHEPHGMGIHGHL----SEVIVPPFAARDRV--MEDALKQRLN---VASIA 111 Query: 121 RESECPPLRTDD-PRAPRRD----TCRVIYISLHDQALMRLRLHQPGEPPALRARAGPGG 175 ES D+ R RR C+ I+I+L D + + L + P +R ++ P Sbjct: 112 AESPNYAACGDEFIRWSRRLHQPLQCQRIHIALPDGSGLLLVIPMP----PMRDQSYPPP 167 Query: 176 PASLFGLQYILLFLVLIAMLAWLVARMATRPIRQLAQAASRLGSDIDHAPLAETGPTEIR 235 S +LLF V I +LAW+VAR+ATRP+RQLA AA +L PL E G +E+R Sbjct: 168 VWS-----AMLLFAVCIGLLAWVVARIATRPLRQLADAADKLDISRAGEPLPEQGSSEVR 222 Query: 236 QAAHAFNAMQARIRRQIQHRTHMLAAITHDLQTPLTRMRLRLEKVSDPGLQQKLIDDLGV 295 A AFN MQ RI ++ RT MLAAITHDLQTPLTR+RLRLEK+ D L+ KL+ D+ Sbjct: 223 MATRAFNRMQKRIYEDVRERTGMLAAITHDLQTPLTRLRLRLEKLPDEALRNKLVGDMQA 282 Query: 296 MHGMVREGLDLARSMDSSEKIQALDIDSLLDSVCADAADAGQDVALQGSTRAFVMAQPGA 355 M M++EGL+L+RS+DSSE +Q LD+DSLLDS+C+DA +AGQ + + T + AQP A Sbjct: 283 MQQMLQEGLELSRSLDSSEAMQLLDLDSLLDSLCSDAVEAGQQIYYRERTAVQLKAQPLA 342 Query: 356 LRRCLTNLIDNACKYGKSARVSIALEQQKIAIRIRDQGPGIPESELEAVFEPFYRLEASR 415 LRR +NL+DNA KYG+ A VS+ + ++ +RIRD GPGIP LE VF PFYR+E SR Sbjct: 343 LRRAFSNLLDNAVKYGQRAEVSLRRDARQCHVRIRDFGPGIPPELLETVFTPFYRIEHSR 402 Query: 416 SRDTGGTGLGLTIALNIAENHHGQLRLRNLAKGGLEVLLELP 457 SR++GGTGLGL+IA NI H+G+L L N A GGL+V + LP Sbjct: 403 SRESGGTGLGLSIARNIVLRHNGELTLSNHADGGLQVHVILP 444 >Q11E92.1 Q11E92_MESSB Periplasmic sensor signal transduction histidine kinase Length = 488 Score = 279 bits (713), Expect = 8e-73, Method: Compositional matrix adjust. Identities = 175/473 (36%), Positives = 257/473 (54%), Gaps = 47/473 (9%) Query: 2 KNFLGSIGNRIFFLLLGGIVVAVFATNWLAGNERRNTLRELRFQHLADRVEQIVQAVDNI 61 K ++ S+G ++F +LL G+ ++ LA R L + +A+RV V +D Sbjct: 4 KQYVRSLGGQVFLVLLIGVALSACLALGLANIRRLADLDRIHIDRVAERVMDYVILLDRA 63 Query: 62 PPAQRPIVLQAASNFGFEARMVEDMNEAIGPNASPSPST-------SPLTEMLQARLGED 114 P A + E++ P P T S L+ RLG Sbjct: 64 P-----------------AHVREEIRLKGFPGLHPPRGTEVTTGVDSALSTETSERLGRP 106 Query: 115 RKIAVQRESECPPLRTDDPRAPRR-----DTCRVIYISLHDQALMRLRLHQPGEPPALRA 169 + C P AP R C ++Y +L D + ++L P P A Sbjct: 107 VRAFNANPPSCLPY------APSRLFHTNTKCWMVYTTLKDGSTLKLATFSPR--PDTFA 158 Query: 170 RAGPGGPASLFGLQYILLFLVLIAMLAWLVARMATRPIRQLAQAASRLGSDIDHAPLAET 229 + P ++ + V + +L + V+RM + P++QL+ AA L D+D P+ E Sbjct: 159 MSPPDA-------VFLSILGVGVIVLTFFVSRMVSAPLQQLSTAARVLAEDLDSPPVTEQ 211 Query: 230 GPTEIRQAAHAFNAMQARIRRQIQHRTHMLAAITHDLQTPLTRMRLRLEKVSDPGLQQKL 289 GPTE+RQA AFN MQ R+R ++ +T +LA+ITHDLQTP+TR+RLRLEKV+D L+ +L Sbjct: 212 GPTEVRQAIRAFNTMQERLRDNVEEKTRILASITHDLQTPMTRLRLRLEKVTDSALRSRL 271 Query: 290 IDDLGVMHGMVREGLDLARSMDSSEKIQALDIDSLLDSVCADAADAGQDVALQGSTRAFV 349 IDDL M +VR+GL+ R + E + L +DSLL+SV DA++ G DV V Sbjct: 272 IDDLRSMQRLVRQGLEYHRGSEVEEPMVVLRLDSLLESVIDDASEGGADVKFIERANCDV 331 Query: 350 MAQPGALRRCLTNLIDNACKYGKSARVSIALEQQKIAIRIRDQGPGIPESELEAVFEPFY 409 A+P ALRRC +NLIDNA KYG A V + E ++ + IRD+GPGIP+ ++EAVF+PF Sbjct: 332 EARPEALRRCFSNLIDNALKYGGQAEVYVRQEDDRVHVHIRDRGPGIPDDKIEAVFQPFC 391 Query: 410 RLEASRSRDTGGTGLGLTIALNIAENHHGQLRLRNLAKGGLEVLLELPPMTPA 462 RL+ + S GG GLGLTIA N+A+ ++G L++ N A GGL+V++ L TP+ Sbjct: 392 RLDENVS---GGVGLGLTIARNMAQLNNGDLQISNGAGGGLDVVVTLKRSTPS 441 >B4W9K2.1 B4W9K2_9CAUL ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein Length = 440 Score = 271 bits (693), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 140/259 (54%), Positives = 176/259 (67%) Query: 196 AWLVARMATRPIRQLAQAASRLGSDIDHAPLAETGPTEIRQAAHAFNAMQARIRRQIQHR 255 AWL + A P+ +L+ A LG D+D PL E G E+RQAA A N MQ R+R I R Sbjct: 177 AWLASHRAAAPLARLSAGALALGRDLDRPPLVEEGAREVRQAAAALNVMQTRLRAMIAER 236 Query: 256 THMLAAITHDLQTPLTRMRLRLEKVSDPGLQQKLIDDLGVMHGMVREGLDLARSMDSSEK 315 T +LAA+ HDLQTPLTRMRLR+EK+ D GL+ +LI DL M +VREGLDLAR + E Sbjct: 237 TRVLAAVAHDLQTPLTRMRLRVEKIGDDGLRAQLIADLAAMQHLVREGLDLARIETAPEP 296 Query: 316 IQALDIDSLLDSVCADAADAGQDVALQGSTRAFVMAQPGALRRCLTNLIDNACKYGKSAR 375 + +D+D+LL ++C DAADAGQ V A + +P ALRRCLTNLIDNA ++G A Sbjct: 297 VVPVDLDALLSALCEDAADAGQPVVFAQGCGAVLPTRPQALRRCLTNLIDNAVRHGGGAT 356 Query: 376 VSIALEQQKIAIRIRDQGPGIPESELEAVFEPFYRLEASRSRDTGGTGLGLTIALNIAEN 435 VS +E + +RD GPG+PE LEA+FEPFYRL+ SRSRD+GGTGLGLTIA +AE Sbjct: 357 VSAMVEGTTTRLAVRDHGPGVPEDRLEALFEPFYRLDPSRSRDSGGTGLGLTIARRMAEV 416 Query: 436 HHGQLRLRNLAKGGLEVLL 454 G+L L N GGLE ++ Sbjct: 417 AGGRLTLANAGDGGLEAVV 435 >Q5P209.1 Q5P209_AROAE Predicted histidine kinase-like ATPase Length = 449 Score = 269 bits (688), Expect = 7e-70, Method: Compositional matrix adjust. Identities = 184/454 (40%), Positives = 256/454 (56%), Gaps = 20/454 (4%) Query: 11 RIFFLLLGGIVVAVFATNWLAGNERRNTLRELRFQHLADRVEQIVQAVDNIPPAQRPIVL 70 R+ + L GI + + + L +ER R++ F+ +A + IV +D++PP QR + Sbjct: 12 RLMLIWLVGIALVLAVSLALFVSERDRHGRDVLFEGVAREIAAIVDVLDSLPPEQREDWI 71 Query: 71 QAASNFGFEARMVEDMNEAIGPNASPSPSTSPLTEMLQARLGEDRKIAVQRESECPPLRT 130 + + + P+A P + SPL + L L E R +AV S R Sbjct: 72 RTLGRR-----RLRLTLDVPPPDAQPLSAGSPLRKALNQALPE-RAVAVFERS-----RA 120 Query: 131 DDPRAPRRDTCRVIYISLHDQALMRLRLHQPGEPPALRARAGPGGPASLFGLQYILLFLV 190 D PRR + + L D A + +RL P L P P SL L+ V Sbjct: 121 HDDGHPRRPQP-LASVRLADGAPLTVRL-----PGVLFGTPPPLPPGSLVAALLALIAGV 174 Query: 191 LIAMLAWLVARMATRPIRQLAQAASRLGSDIDHAPLAETGPTEIRQAAHAFNAMQARIRR 250 +L+WL R+ATRP+ +LA AA LG+D +H P+ GP E+ +AAHAFN MQ R+++ Sbjct: 175 --TLLSWLAVRIATRPLSRLAAAADALGADPNHPPIDTGGPVEVARAAHAFNRMQQRLQQ 232 Query: 251 QIQHRTHMLAAITHDLQTPLTRMRLRLEKVSDPGLQQKLIDDLGVMHGMVREGLDLARSM 310 + RT +LAAI+HDLQTP+TR+RLR E V D ++ K+ DL M + +EGLD ARS+ Sbjct: 233 HVGERTRILAAISHDLQTPITRLRLRAELVEDEAVRAKIQSDLDAMQALAKEGLDYARSL 292 Query: 311 DSSEKIQALDIDSLLDSVCADAADAGQDVALQGSTRAFVMAQPGALRRCLTNLIDNACKY 370 D S +A+D+++L+ ++C DA D G V L G A+ ALRR L NLI+N K+ Sbjct: 293 DVSAAAKAIDLNALVAALCEDAGDMGWQVTLAGRAGTPCHARLDALRRALWNLIENGVKF 352 Query: 371 GKSARVSIALEQQKIAIRIRDQGPGIPESELEAVFEPFYRLEASRSRDTGGTGLGLTIAL 430 G V++A + IR+RD G G+PE+ELE VFEPFYR EASRSRDTGGTGLGL IA Sbjct: 353 GGRVDVTVAETPEHFEIRVRDHGRGLPEAELEKVFEPFYRAEASRSRDTGGTGLGLAIAR 412 Query: 431 NIAENHHGQLRLRNLAKGGLEVLLELP-PMTPAK 463 N+ G + L N GGLE L+ LP P TP+ Sbjct: 413 NLLRAQGGDVSLANRRDGGLEALVTLPHPGTPSS 446