BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0029.0048.p (127 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value D8IPX8.1 D8IPX8_HERSS 50S ribosomal protein L19 251 2e-65 A4G2T8.1 RL19_HERAR 50S ribosomal protein L19 235 2e-60 F1VV86.1 F1VV86_9BURK LSU ribosomal protein L19p 232 1e-59 C3XB67.1 C3XB67_OXAFO 50S ribosomal protein L19 226 1e-57 A1WB49.1 RL19_ACISJ 50S ribosomal protein L19 221 3e-56 B9ME96.1 RL19_ACIET 50S ribosomal protein L19 221 3e-56 F0Q945.1 F0Q945_ACIAP Ribosomal protein L19 221 3e-56 A6SVI7.1 RL19_JANMA 50S ribosomal protein L19 220 5e-56 A1TND3.1 RL19_ACIAC 50S ribosomal protein L19 219 1e-55 B7WT00.1 B7WT00_COMTE 50S ribosomal protein L19 218 3e-55 >D8IPX8.1 D8IPX8_HERSS 50S ribosomal protein L19 Length = 127 Score = 251 bits (641), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 127/127 (100%), Positives = 127/127 (100%) Query: 1 MDLIQQLEQEEIARLAKNIPDFAPGDTVIVNVNVVEGTRKRAQAYEGVVIARRNRGLNSN 60 MDLIQQLEQEEIARLAKNIPDFAPGDTVIVNVNVVEGTRKRAQAYEGVVIARRNRGLNSN Sbjct: 1 MDLIQQLEQEEIARLAKNIPDFAPGDTVIVNVNVVEGTRKRAQAYEGVVIARRNRGLNSN 60 Query: 61 FIVRKISSGEGVERTFQLYSPLIASIEVKRRGDVRRAKLYYLRERSGKSARIKEKLPSRA 120 FIVRKISSGEGVERTFQLYSPLIASIEVKRRGDVRRAKLYYLRERSGKSARIKEKLPSRA Sbjct: 61 FIVRKISSGEGVERTFQLYSPLIASIEVKRRGDVRRAKLYYLRERSGKSARIKEKLPSRA 120 Query: 121 AKAAAAE 127 AKAAAAE Sbjct: 121 AKAAAAE 127 >A4G2T8.1 RL19_HERAR 50S ribosomal protein L19 Length = 128 Score = 235 bits (599), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 120/127 (94%), Positives = 122/127 (96%), Gaps = 2/127 (1%) Query: 1 MDLIQQLEQEEIARLAKNIPDFAPGDTVIVNVNVVEGTRKRAQAYEGVVIARRNRGLNSN 60 MDLIQ LEQEEIARLAKNIPDFAPGDTVIVNVNVVEGTRKRAQAYEGVVI+RRNRGLNSN Sbjct: 1 MDLIQTLEQEEIARLAKNIPDFAPGDTVIVNVNVVEGTRKRAQAYEGVVISRRNRGLNSN 60 Query: 61 FIVRKISSGEGVERTFQLYSPLIASIEVKRRGDVRRAKLYYLRERSGKSARIKEKLPSR- 119 FIVRKISSGEGVERTFQLYSPLIASIEVKRRGDVRRAKLYYLRERSGKSARIKEKLP R Sbjct: 61 FIVRKISSGEGVERTFQLYSPLIASIEVKRRGDVRRAKLYYLRERSGKSARIKEKLPQRR 120 Query: 120 -AAKAAA 125 +KAAA Sbjct: 121 VVSKAAA 127 >F1VV86.1 F1VV86_9BURK LSU ribosomal protein L19p Length = 128 Score = 232 bits (592), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 119/128 (92%), Positives = 123/128 (96%), Gaps = 2/128 (1%) Query: 1 MDLIQQLEQEEIARLAKNIPDFAPGDTVIVNVNVVEGTRKRAQAYEGVVIARRNRGLNSN 60 MDLIQQLEQEEIARL K+IPDFAPGDTVIV+VNVVEGTRKRAQAYEGVVI+RRNRGLNSN Sbjct: 1 MDLIQQLEQEEIARLGKSIPDFAPGDTVIVSVNVVEGTRKRAQAYEGVVISRRNRGLNSN 60 Query: 61 FIVRKISSGEGVERTFQLYSPLIASIEVKRRGDVRRAKLYYLRERSGKSARIKEKLPSR- 119 FIVRKISSGEGVERTFQLYSPLIASIEVKRRGDVRRAKLYYLRERSGKSARIKEKLP+R Sbjct: 61 FIVRKISSGEGVERTFQLYSPLIASIEVKRRGDVRRAKLYYLRERSGKSARIKEKLPNRR 120 Query: 120 -AAKAAAA 126 AK AAA Sbjct: 121 VVAKKAAA 128 >C3XB67.1 C3XB67_OXAFO 50S ribosomal protein L19 Length = 131 Score = 226 bits (575), Expect = 1e-57, Method: Compositional matrix adjust. Identities = 112/124 (90%), Positives = 120/124 (96%) Query: 1 MDLIQQLEQEEIARLAKNIPDFAPGDTVIVNVNVVEGTRKRAQAYEGVVIARRNRGLNSN 60 M+LIQQLE+EEI RL K+IPDFAPGDTVIV+V VVEG RKRAQAYEGVVI+RRNRGLNSN Sbjct: 7 MNLIQQLEKEEIERLGKSIPDFAPGDTVIVSVMVVEGNRKRAQAYEGVVISRRNRGLNSN 66 Query: 61 FIVRKISSGEGVERTFQLYSPLIASIEVKRRGDVRRAKLYYLRERSGKSARIKEKLPSRA 120 FIVRKISSGEGVERTFQLYSPLIASIEVKRRGDVRRAKL+YLRERSGKSARIKEKLPSR+ Sbjct: 67 FIVRKISSGEGVERTFQLYSPLIASIEVKRRGDVRRAKLFYLRERSGKSARIKEKLPSRS 126 Query: 121 AKAA 124 AK+A Sbjct: 127 AKSA 130 >A1WB49.1 RL19_ACISJ 50S ribosomal protein L19 Length = 127 Score = 221 bits (562), Expect = 3e-56, Method: Compositional matrix adjust. Identities = 112/126 (88%), Positives = 114/126 (90%) Query: 1 MDLIQQLEQEEIARLAKNIPDFAPGDTVIVNVNVVEGTRKRAQAYEGVVIARRNRGLNSN 60 M+LIQ LEQEEIARL K IP FAPGDTVIVNVNVVEGTRKR QAYEGVVIA+RNRGLNS Sbjct: 1 MNLIQILEQEEIARLNKTIPSFAPGDTVIVNVNVVEGTRKRVQAYEGVVIAKRNRGLNSG 60 Query: 61 FIVRKISSGEGVERTFQLYSPLIASIEVKRRGDVRRAKLYYLRERSGKSARIKEKLPSRA 120 F VRKISSGEGVERTFQ YSPLIASIEVKRRGDVRRAKLYYLRERSGKSARIKEKLPSR Sbjct: 61 FTVRKISSGEGVERTFQTYSPLIASIEVKRRGDVRRAKLYYLRERSGKSARIKEKLPSRV 120 Query: 121 AKAAAA 126 AA A Sbjct: 121 KAAAVA 126 >B9ME96.1 RL19_ACIET 50S ribosomal protein L19 Length = 127 Score = 221 bits (562), Expect = 3e-56, Method: Compositional matrix adjust. Identities = 112/126 (88%), Positives = 114/126 (90%) Query: 1 MDLIQQLEQEEIARLAKNIPDFAPGDTVIVNVNVVEGTRKRAQAYEGVVIARRNRGLNSN 60 M+LIQ LEQEEIARL K IP FAPGDTVIVNVNVVEGTRKR QAYEGVVIA+RNRGLNS Sbjct: 1 MNLIQILEQEEIARLNKTIPSFAPGDTVIVNVNVVEGTRKRVQAYEGVVIAKRNRGLNSG 60 Query: 61 FIVRKISSGEGVERTFQLYSPLIASIEVKRRGDVRRAKLYYLRERSGKSARIKEKLPSRA 120 F VRKISSGEGVERTFQ YSPLIASIEVKRRGDVRRAKLYYLRERSGKSARIKEKLPSR Sbjct: 61 FTVRKISSGEGVERTFQTYSPLIASIEVKRRGDVRRAKLYYLRERSGKSARIKEKLPSRV 120 Query: 121 AKAAAA 126 AA A Sbjct: 121 KAAAVA 126 >F0Q945.1 F0Q945_ACIAP Ribosomal protein L19 Length = 128 Score = 221 bits (562), Expect = 3e-56, Method: Compositional matrix adjust. Identities = 111/125 (88%), Positives = 116/125 (92%) Query: 1 MDLIQQLEQEEIARLAKNIPDFAPGDTVIVNVNVVEGTRKRAQAYEGVVIARRNRGLNSN 60 M+LIQ LEQEEIARL K IP+FAPGDTVIV+VNVVEGTRKR QAYEGVVIA+RNRGLNS Sbjct: 1 MNLIQTLEQEEIARLNKTIPEFAPGDTVIVSVNVVEGTRKRVQAYEGVVIAKRNRGLNSG 60 Query: 61 FIVRKISSGEGVERTFQLYSPLIASIEVKRRGDVRRAKLYYLRERSGKSARIKEKLPSRA 120 F VRKISSGEGVERTFQ YSPLIASIEVKRRGDVRRAKLYYLR+RSGKSARIKEKLPSR Sbjct: 61 FTVRKISSGEGVERTFQTYSPLIASIEVKRRGDVRRAKLYYLRDRSGKSARIKEKLPSRV 120 Query: 121 AKAAA 125 KAAA Sbjct: 121 NKAAA 125 >A6SVI7.1 RL19_JANMA 50S ribosomal protein L19 Length = 128 Score = 220 bits (560), Expect = 5e-56, Method: Compositional matrix adjust. Identities = 121/127 (95%), Positives = 123/127 (96%), Gaps = 2/127 (1%) Query: 1 MDLIQQLEQEEIARLAKNIPDFAPGDTVIVNVNVVEGTRKRAQAYEGVVIARRNRGLNSN 60 MDLIQQLEQEEIARLAKNIPDFAPGDTV+VNVNVVEGTRKRAQAYEGVVI+RRNRGLNSN Sbjct: 1 MDLIQQLEQEEIARLAKNIPDFAPGDTVVVNVNVVEGTRKRAQAYEGVVISRRNRGLNSN 60 Query: 61 FIVRKISSGEGVERTFQLYSPLIASIEVKRRGDVRRAKLYYLRERSGKSARIKEKLPSR- 119 FIVRKISSGEGVERTFQLYSPLIASIEVKRRGDVRRAKLYYLRERSGKSARIKEKLP R Sbjct: 61 FIVRKISSGEGVERTFQLYSPLIASIEVKRRGDVRRAKLYYLRERSGKSARIKEKLPQRR 120 Query: 120 -AAKAAA 125 AAK AA Sbjct: 121 VAAKQAA 127 >A1TND3.1 RL19_ACIAC 50S ribosomal protein L19 Length = 128 Score = 219 bits (558), Expect = 1e-55, Method: Compositional matrix adjust. Identities = 110/126 (87%), Positives = 115/126 (91%) Query: 1 MDLIQQLEQEEIARLAKNIPDFAPGDTVIVNVNVVEGTRKRAQAYEGVVIARRNRGLNSN 60 M+LIQ LEQEEIARL K IP+FAPGDTVIV+VNVVEG RKR QAYEGVVIA+RNRGLNS Sbjct: 1 MNLIQTLEQEEIARLNKTIPEFAPGDTVIVSVNVVEGNRKRVQAYEGVVIAKRNRGLNSG 60 Query: 61 FIVRKISSGEGVERTFQLYSPLIASIEVKRRGDVRRAKLYYLRERSGKSARIKEKLPSRA 120 F VRKISSGEGVERTFQ YSPLIASIEVKRRGDVRRAKLYYLR+RSGKSARIKEKLPSR Sbjct: 61 FTVRKISSGEGVERTFQTYSPLIASIEVKRRGDVRRAKLYYLRDRSGKSARIKEKLPSRV 120 Query: 121 AKAAAA 126 KAAA Sbjct: 121 NKAAAT 126 >B7WT00.1 B7WT00_COMTE 50S ribosomal protein L19 Length = 128 Score = 218 bits (554), Expect = 3e-55, Method: Compositional matrix adjust. Identities = 109/126 (86%), Positives = 114/126 (90%) Query: 1 MDLIQQLEQEEIARLAKNIPDFAPGDTVIVNVNVVEGTRKRAQAYEGVVIARRNRGLNSN 60 M+LIQ LEQEEIARL K IP+FAPGDTVIV+VNVVEG+RKR QAYEGVVIA+RNRGLNS Sbjct: 1 MNLIQTLEQEEIARLNKTIPEFAPGDTVIVSVNVVEGSRKRVQAYEGVVIAKRNRGLNSG 60 Query: 61 FIVRKISSGEGVERTFQLYSPLIASIEVKRRGDVRRAKLYYLRERSGKSARIKEKLPSRA 120 F VRKISSGEGVERTFQ YSPLIA IEVKRRGDVRRAKLYYLRERSGKSARIKEKLP R Sbjct: 61 FTVRKISSGEGVERTFQTYSPLIAKIEVKRRGDVRRAKLYYLRERSGKSARIKEKLPQRV 120 Query: 121 AKAAAA 126 K AAA Sbjct: 121 NKTAAA 126