BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0029.0029.p         (123 letters)

Database: pfamseq 
           15,929,002 sequences; 5,169,768,107 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D8IPV9.1 D8IPV9_HERSS Putative uncharacterized protein                251   3e-65
D3GUQ8.1 D3GUQ8_ECO44 Putative uncharacterized protein mchS3           73   2e-11
Q712P9.1 Q712P9_ECOLX MchS3 protein                                    73   2e-11
A9BUQ9.1 A9BUQ9_DELAS Putative uncharacterized protein                 67   1e-09

>D8IPV9.1 D8IPV9_HERSS Putative uncharacterized protein
          Length = 146

 Score =  251 bits (640), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 121/123 (98%), Positives = 123/123 (100%)

Query: 1   VNEDLQALQRTPTFALGQVGFIGHISQSEQHYRRLLKSSDALAVFMQLVDAEQATPEARL 60
           VNEDLQALQRTPTFALGQVGFIGHISQSEQHYRRLLKSSDALAVFMQLVDAEQATPEARL
Sbjct: 24  VNEDLQALQRTPTFALGQVGFIGHISQSEQHYRRLLKSSDALAVFMQLVDAEQATPEARL 83

Query: 61  YAACGLHALAPAQFDNATRRLRDSGLQVSVLRTDILQREPVARKLDHIARHGCDNAYWQA 120
           YAACGLHALAPAQFDNATRRLRDSGLQVSVLRTDILQREPVARKLDHIA+HGCDNAYWQ+
Sbjct: 84  YAACGLHALAPAQFDNATRRLRDSGLQVSVLRTDILQREPVARKLDHIAQHGCDNAYWQS 143

Query: 121 ASQ 123
           ASQ
Sbjct: 144 ASQ 146


>D3GUQ8.1 D3GUQ8_ECO44 Putative uncharacterized protein mchS3
          Length = 144

 Score = 72.8 bits (177), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 35/109 (32%), Positives = 62/109 (56%), Gaps = 1/109 (0%)

Query: 6   QALQRTPTFALGQVGFIGHISQSEQHYRRLLKSSDALAVFMQLVDAEQATPEARLYAACG 65
           Q+L++T  F++G  GFIG+ S+ E+ Y  +L   +   +F  ++   ++T E+++YAACG
Sbjct: 29  QSLEKTTYFSIGMNGFIGYQSEGEKLYTHILTLDNPEEIFKNIIKNRKSTKESKIYAACG 88

Query: 66  LHALAPAQFDNATRRLRDSGLQVSVLRTDILQREPVARKLDHIARHGCD 114
           L+ L     ++      D    VSVLR DIL +  +   L+ +  +GC+
Sbjct: 89  LYYLNVENIESLFNE-NDKQEYVSVLRGDILTKIKLNDILNSVIINGCN 136


>Q712P9.1 Q712P9_ECOLX MchS3 protein
          Length = 144

 Score = 72.8 bits (177), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 35/109 (32%), Positives = 62/109 (56%), Gaps = 1/109 (0%)

Query: 6   QALQRTPTFALGQVGFIGHISQSEQHYRRLLKSSDALAVFMQLVDAEQATPEARLYAACG 65
           Q+L++T  F++G  GFIG+ S+ E+ Y  +L   +   +F  ++   ++T E+++YAACG
Sbjct: 29  QSLEKTTYFSIGMNGFIGYQSEGEKLYTHILTLDNPEEIFKNIIKNRKSTKESKIYAACG 88

Query: 66  LHALAPAQFDNATRRLRDSGLQVSVLRTDILQREPVARKLDHIARHGCD 114
           L+ L     ++      D    VSVLR DIL +  +   L+ +  +GC+
Sbjct: 89  LYYLNVENIESLFNE-NDKQEYVSVLRGDILTKIKLNDILNSVIINGCN 136


>A9BUQ9.1 A9BUQ9_DELAS Putative uncharacterized protein
          Length = 170

 Score = 66.6 bits (161), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 36/103 (34%), Positives = 55/103 (53%)

Query: 14  FALGQVGFIGHISQSEQHYRRLLKSSDALAVFMQLVDAEQATPEARLYAACGLHALAPAQ 73
           F LG VGF G IS +E+H   +L+  +A AV + ++D  + +P A+LYA CGL  +    
Sbjct: 67  FNLGLVGFAGEISPAERHLEAMLRRPEANAVLLSVIDDPRRSPVAKLYALCGLKRMGSGG 126

Query: 74  FDNATRRLRDSGLQVSVLRTDILQREPVARKLDHIARHGCDNA 116
           ++ A  +LR    QVSV+  D + +E +    D I    C   
Sbjct: 127 YEAALIKLRGFEGQVSVMLGDQMFQEDIREAADRIENLECSEG 169