BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0029.0027.p (319 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value D8IPV7.1 D8IPV7_HERSS ABC-type nitrate/sulfonate/bicarbonate tra... 643 0.0 E4WA25.1 E4WA25_RHOE1 Putative ABC transporter substrate binding... 167 2e-39 E9SWS5.1 E9SWS5_COREQ Putative uncharacterized protein 167 2e-39 D9WTI5.1 D9WTI5_9ACTO PE-PGRS family protein 157 2e-36 E9SWT6.1 E9SWT6_COREQ Putative uncharacterized protein 135 1e-29 E4WA14.1 E4WA14_RHOE1 Putative lipoprotein 134 2e-29 B2JWC0.1 B2JWC0_BURP8 NMT1/THI5 like domain protein 74 3e-11 A6GT72.1 A6GT72_9BURK Putative uncharacterized protein 71 2e-10 B4BMT4.1 B4BMT4_9BACI Aliphatic sulfonates family ABC transporte... 71 2e-10 Q7VVN1.1 Q7VVN1_BORPE ABC transport protein, periplasmic component 69 1e-09 >D8IPV7.1 D8IPV7_HERSS ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component protein Length = 319 Score = 643 bits (1658), Expect = 0.0, Method: Compositional matrix adjust. Identities = 316/319 (99%), Positives = 318/319 (99%) Query: 1 VTHSTPSPHRRKLLLGAASMLAAGALPAVPALAQGAPVTIGVGADPVFTAFFVAANEKLF 60 +THSTPSPHRRKLLLGAASMLAAGALPAVPALAQGAPVTIGVGADPVFTAFFVAANEKLF Sbjct: 1 MTHSTPSPHRRKLLLGAASMLAAGALPAVPALAQGAPVTIGVGADPVFTAFFVAANEKLF 60 Query: 61 AKYGAPNVSVQSYTDGGEALNALVANQVNLGCAGEPTHIVRLARAELRPLAVTYQSRTYL 120 AKYGAPNVSVQSYTDGGEALNALVANQVNLGCAGEPTHIVRLARAELRPLAVTYQSRTYL Sbjct: 61 AKYGAPNVSVQSYTDGGEALNALVANQVNLGCAGEPTHIVRLARAELRPLAVTYQSRTYL 120 Query: 121 KLVARKDIATADKIRKFGIVAGSVSEYVTGLTIRQLKLDASKIEMVRSGPPELPALLARG 180 KLVARKDIATADKIRKFGIV GSVSEYVTGLTIRQLKLDASKIEMVRSGPPELPALLARG Sbjct: 121 KLVARKDIATADKIRKFGIVVGSVSEYVTGLTIRQLKLDASKIEMVRSGPPELPALLARG 180 Query: 181 DIDAYFVWEPWPTLGVQQGGHILMTCGDVGYTSTLWLSATAPWLAANKEVAGKILKALAE 240 DIDAYFVWEPWPTLGVQQGGHILMTCGDVGYTSTLWLSATAPWLAANKEVAG+ILKALAE Sbjct: 181 DIDAYFVWEPWPTLGVQQGGHILMTCGDVGYTSTLWLSATAPWLAANKEVAGRILKALAE 240 Query: 241 AAEITRKDPPRAAQSVQAITRIPIPQTLNSLKDMEPVVRDFSDTDLATANAIGEFLLSRQ 300 AAEITRKDPPRAAQSVQAITRIPIPQTLNSLKDMEPVVRDFSDTDLATANAIGEFLLSRQ Sbjct: 241 AAEITRKDPPRAAQSVQAITRIPIPQTLNSLKDMEPVVRDFSDTDLATANAIGEFLLSRQ 300 Query: 301 AIKAPVDMGKVLQRGFYKG 319 AIKAPVDMGKVLQRGFYKG Sbjct: 301 AIKAPVDMGKVLQRGFYKG 319 >E4WA25.1 E4WA25_RHOE1 Putative ABC transporter substrate binding lipoprotein Length = 326 Score = 167 bits (422), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 107/316 (33%), Positives = 168/316 (53%), Gaps = 11/316 (3%) Query: 12 KLLLGAASML---AAGAL--PAVPALAQ--GAPVTIGVGADPVFTAFFVAANEKLFAKYG 64 K+ L +A+++ AAGA PA + A G P+ I VG D + FFVA E +FA G Sbjct: 9 KVTLASAALVLTVAAGACSRPATQSTADSGGGPLRIAVGIDASYAPFFVADQEGMFADEG 68 Query: 65 APNVSVQSYTDGGEALNALVANQVNLGCAGEPTHIVRLARA-ELRPLAVTYQSRTYLKLV 123 +V + + GGEA++AL QV + + + T I +L + LR + S Y+K+V Sbjct: 69 L-DVQLVQFGRGGEAVDALATGQVQVAGSSDTTTIAQLRQNPSLRAMYSYEVSGDYIKVV 127 Query: 124 ARKDIATADKIRKFGIVAGSVSEYVTGLTIRQLKLDASKIEMVRSGPPELPALLARGDID 183 R + TA I K GIV G +S+ T + + +EMV + P ++PALL+RGDID Sbjct: 128 LRNGVDTAAGIEKMGIVPG-LSQISTDKYLEANGIAPGAVEMVSATPTDMPALLSRGDID 186 Query: 184 AYFVWEPWPTLGVQQG-GHILMTCGDVGYTSTLWLSATAPWLAANKEVAGKILKALAEAA 242 Y +WEPWP + QG GH++ GD + W TAPWL N++ A KI K LA+A+ Sbjct: 187 GYVLWEPWPATALSQGSGHVVAVTGDYDWFYHHWAITTAPWLEQNEDTARKIAKVLAQAS 246 Query: 243 EITRKDPPRAAQSVQAITRIPIPQTLNSLKDMEPVVRDFSDTDLATANAIGEFLLSRQAI 302 E DP AA + + + QT+ ++ +++ V + +D D+ +A +I +F + Sbjct: 247 ERVESDPQTAAAATRKAVNVAEDQTVTAVSEIDFGVENLTDKDVESAQSIVDFYKKIGVL 306 Query: 303 KAPVDMGKVLQRGFYK 318 D+ + +Y+ Sbjct: 307 SEQPDLTSAMLLDWYQ 322 >E9SWS5.1 E9SWS5_COREQ Putative uncharacterized protein Length = 326 Score = 167 bits (422), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 107/316 (33%), Positives = 168/316 (53%), Gaps = 11/316 (3%) Query: 12 KLLLGAASML---AAGAL--PAVPALAQ--GAPVTIGVGADPVFTAFFVAANEKLFAKYG 64 K+ L +A+++ AAGA PA + A G P+ I VG D + FFVA E +FA G Sbjct: 9 KVTLASAALVLTVAAGACSRPATQSTADSGGGPLRIAVGIDASYAPFFVADQEGMFADEG 68 Query: 65 APNVSVQSYTDGGEALNALVANQVNLGCAGEPTHIVRLARA-ELRPLAVTYQSRTYLKLV 123 +V + + GGEA++AL QV + + + T I +L + LR + S Y+K+V Sbjct: 69 L-DVQLVQFGRGGEAVDALATGQVQVAGSSDTTTIAQLRQNPSLRAMYSYEVSGDYIKVV 127 Query: 124 ARKDIATADKIRKFGIVAGSVSEYVTGLTIRQLKLDASKIEMVRSGPPELPALLARGDID 183 R + TA I K GIV G +S+ T + + +EMV + P ++PALL+RGDID Sbjct: 128 LRNGVDTAAGIEKMGIVPG-LSQISTDKYLEANGIAPGAVEMVSATPTDMPALLSRGDID 186 Query: 184 AYFVWEPWPTLGVQQG-GHILMTCGDVGYTSTLWLSATAPWLAANKEVAGKILKALAEAA 242 Y +WEPWP + QG GH++ GD + W TAPWL N++ A KI K LA+A+ Sbjct: 187 GYVLWEPWPATALSQGSGHVVAVTGDYDWFYHHWAITTAPWLEQNEDTARKIAKVLAQAS 246 Query: 243 EITRKDPPRAAQSVQAITRIPIPQTLNSLKDMEPVVRDFSDTDLATANAIGEFLLSRQAI 302 E DP AA + + + QT+ ++ +++ V + +D D+ +A +I +F + Sbjct: 247 ERVESDPQTAAAATRKAVNVAEDQTVTAVSEIDFGVENLTDKDVESAQSIVDFYKKIGVL 306 Query: 303 KAPVDMGKVLQRGFYK 318 D+ + +Y+ Sbjct: 307 SEQPDLTSAMLLDWYQ 322 >D9WTI5.1 D9WTI5_9ACTO PE-PGRS family protein Length = 325 Score = 157 bits (397), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 104/308 (33%), Positives = 154/308 (50%), Gaps = 6/308 (1%) Query: 13 LLLGAASMLAAGALPAVPALAQGAP-VTIGVGADPVFTAFFVAANEKLFAKYGAPNVSVQ 71 LLL A M AG + + +G P V + +G D + F++A +FAK G NV + Sbjct: 18 LLLVPACM--AGTMDSDAGEVKGGPTVRVALGVDASYAPFYLAKERGMFAKAGV-NVELM 74 Query: 72 SYTDGGEALNALVANQVNLGCAGEPTHIVRLA-RAELRPLAVTYQSRTYLKLVARKDIAT 130 G A A+ A L + T + +A LR L V S YLK+V R I + Sbjct: 75 RTEGGPTAGQAVTAGTAQLAANADSTALSLMAGDPGLRALGVFQSSGRYLKVVMRDGITS 134 Query: 131 ADKIRKFGIVAGSVSEYVTGLTIRQLKLDASKIEMVRSGPPELPALLARGDIDAYFVWEP 190 +I+ + G + Y T +R+ +D + + + +S PPE+P LL RG IDAY ++EP Sbjct: 135 PRQIKTMASIQG-LGLYATHAYLRRHGIDPASVTIHQSSPPEMPGLLQRGSIDAYVLYEP 193 Query: 191 WPTLGVQQGGHILMTCGDVGYTSTLWLSATAPWLAANKEVAGKILKALAEAAEITRKDPP 250 W G + GGHI GD G T WL A WL N+EVA K+ K LAEA + +DP Sbjct: 194 WAAKGAESGGHIAGHSGDFGVTYVQWLLAEDRWLKNNQEVAAKVFKVLAEADRMVTRDPT 253 Query: 251 RAAQSVQAITRIPIPQTLNSLKDMEPVVRDFSDTDLATANAIGEFLLSRQAIKAPVDMGK 310 AA + ++P QT L ++ VR + D+ + I FL ++ IK D+ + Sbjct: 254 AAAAATNQQVKLPTAQTRKVLPEITFRVRGLTGADVEQSARITGFLTGQKLIKKSPDLDR 313 Query: 311 VLQRGFYK 318 L +G+Y+ Sbjct: 314 ALMKGWYE 321 >E9SWT6.1 E9SWT6_COREQ Putative uncharacterized protein Length = 326 Score = 135 bits (339), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 92/279 (32%), Positives = 139/279 (49%), Gaps = 2/279 (0%) Query: 38 VTIGVGADPVFTAFFVAANEKLFAKYGAPNVSVQSYTDGGEALNALVANQVNLGCAGEPT 97 V I VG DP + FFVA E LF G +Q+ A N + G A Sbjct: 42 VRISVGVDPSYAPFFVAEKEGLFEAAGLNVQIIQTEGGAASAQNVVAGTSEMSGNADSTA 101 Query: 98 HIVRLARAELRPLAVTYQSRTYLKLVARKDIATADKIRKFGIVAGSVSEYVTGLTIRQLK 157 V A LR L V +S Y ++V R + T I+ G+ G + Y T +R + Sbjct: 102 LTVMAANPTLRALGVYEESDRYFQVVLRPGV-TPQSIKTMGVFPG-IGLYFTDAYLRSVG 159 Query: 158 LDASKIEMVRSGPPELPALLARGDIDAYFVWEPWPTLGVQQGGHILMTCGDVGYTSTLWL 217 LD + +++V + PPE PALLARGDID + ++PW V GG ++ T GD G + WL Sbjct: 160 LDPAAVKLVSTSPPEQPALLARGDIDGFISFDPWVAQAVATGGRVVATSGDFGARYSQWL 219 Query: 218 SATAPWLAANKEVAGKILKALAEAAEITRKDPPRAAQSVQAITRIPIPQTLNSLKDMEPV 277 + WLAAN+E+A ++ +A+AA I DP RAA ++ + ++ + ++ ++ V Sbjct: 220 LTSESWLAANEELAARVFAVVADAAAIVNSDPDRAAAAISSAIQMDPAEAKRTVTQIDFV 279 Query: 278 VRDFSDTDLATANAIGEFLLSRQAIKAPVDMGKVLQRGF 316 RDF+ D A A+ + F + I VD V+ G+ Sbjct: 280 GRDFTPDDTARADDLVTFFRDQGKITGSVDTDTVMLHGW 318 >E4WA14.1 E4WA14_RHOE1 Putative lipoprotein Length = 326 Score = 134 bits (337), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 92/279 (32%), Positives = 139/279 (49%), Gaps = 2/279 (0%) Query: 38 VTIGVGADPVFTAFFVAANEKLFAKYGAPNVSVQSYTDGGEALNALVANQVNLGCAGEPT 97 V I VG DP + FFVA E LF G +Q+ A N + G A Sbjct: 42 VRISVGVDPSYAPFFVAEKEGLFEAAGLNVQIIQTEGGAASAQNVVAGTSEMSGNADSTA 101 Query: 98 HIVRLARAELRPLAVTYQSRTYLKLVARKDIATADKIRKFGIVAGSVSEYVTGLTIRQLK 157 V A LR L V +S Y ++V R + T I+ G+ G + Y T +R + Sbjct: 102 LTVMAANPTLRALGVYEESDRYFQVVLRPGV-TPQSIKTMGVFPG-IGLYFTDAYLRSVG 159 Query: 158 LDASKIEMVRSGPPELPALLARGDIDAYFVWEPWPTLGVQQGGHILMTCGDVGYTSTLWL 217 LD + +++V + PPE PALLARGDID + ++PW V GG ++ T GD G + WL Sbjct: 160 LDPAAVKLVSTSPPEQPALLARGDIDGFISFDPWVAQAVATGGRVVGTSGDFGARYSQWL 219 Query: 218 SATAPWLAANKEVAGKILKALAEAAEITRKDPPRAAQSVQAITRIPIPQTLNSLKDMEPV 277 + WLAAN+E+A ++ +A+AA I DP RAA ++ + ++ + ++ ++ V Sbjct: 220 LTSESWLAANEELAARVFAVVADAAAIVNSDPDRAAAAISSAIQMDPAEAKRTVTQIDFV 279 Query: 278 VRDFSDTDLATANAIGEFLLSRQAIKAPVDMGKVLQRGF 316 RDF+ D A A+ + F + I VD V+ G+ Sbjct: 280 GRDFTPDDTARADDLVTFFRDQGKITGSVDTDTVMLHGW 318 >B2JWC0.1 B2JWC0_BURP8 NMT1/THI5 like domain protein Length = 339 Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 75/299 (25%), Positives = 130/299 (43%), Gaps = 25/299 (8%) Query: 10 RRKLLLG-AASMLAAGALPAVPALAQGAP-VTIGV---GADPVFTAFFVAANEKLFAKYG 64 R + + G AA+MLA+ L A +Q P V IG GADP + V+ E +F Sbjct: 3 RMQWVYGVAAAMLASSCLVPGAAYSQNKPEVIIGYEDNGADP----YMVSMTEHMFEHQM 58 Query: 65 APNVSVQSYTDGGEALNALVANQVNLGCA-GEPTHIVRLARAELRPLAVTYQSRTYLK-- 121 +V + ++ G A++AL +N + C G P + +A+ P+ + Y Y Sbjct: 59 NADVQYKLFSSGPAAMSALASNSLTFMCGLGIPPLVTAIAQG--LPMTIVYNQERYTNAA 116 Query: 122 -LVARKDIATAD----KIRKFGIVAGSVSEYVTGLTIRQLKLDASKIEMVRSGPPELPAL 176 +V + D D + +K IVAGS + + + + S + + PP++ Sbjct: 117 GIVVKPDSGIHDVAGLQGKKIAIVAGSQASFELATFLAAAHVPYSSVTQINMAPPQMRTS 176 Query: 177 LARGDIDAYFVWEPWPTLGVQQGGHILMTCGDVGYTSTLW--LSATAPWLAANKEVAGKI 234 G IDA VW+P + GG + T GD+ ++ + A + W A+ ++ Sbjct: 177 WVTGAIDAAIVWDPVFSALRAAGGKAIKTDGDLPREASSYNVCIANSEWAKAHPDLVRGF 236 Query: 235 LKALAEAAEITRKDPPRAAQSVQAITRIPIPQTLNSLKDMEPVVRDFSDTDLATANAIG 293 + AL + ++T K+ +A + T + +P + L E FS D T +G Sbjct: 237 VAALDQGYQVTMKNRDQALAEMARATGVTVPVATSELAGYEL----FSGADQTTPKVMG 291 >A6GT72.1 A6GT72_9BURK Putative uncharacterized protein Length = 319 Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 61/238 (25%), Positives = 102/238 (42%), Gaps = 7/238 (2%) Query: 33 AQGAPVTIGVGADPVFTAFFVAANEKLFAKYGAPNVSVQSYTDGGEALNALVANQVNLGC 92 AQ AP+ IGV + ++A +E F K G NV + G + ++ Q +L Sbjct: 17 AQAAPLRIGVSETILSLPLYIAESEGFFQKRGV-NVEFVNCVGGNRCVKNMLDGQTDLST 75 Query: 93 AGE-PTHIVRLARAELRPLAVTYQSRTYLKLVARKD--IATADKIRK--FGIVAGSVSEY 147 A E P R + L LK+VAR D I K+R G V G S+Y Sbjct: 76 ATELPVVFNSFTRKDFAILTSFVSVSNDLKVVARTDSKITEPGKLRDKTLGYVKGGASQY 135 Query: 148 VTGLTIRQLKLDASKIEMVRSGPPELPALLARGDIDAYFVWEPWPT-LGVQQGGHILMTC 206 V L + +D +++ P A LA ++DA +WEP+ + + + G + + Sbjct: 136 VLDLVLVYNGIDPDTVKLKTITPETALAALANKEVDALCIWEPFASRIELDLGTDVQLVP 195 Query: 207 GDVGYTSTLWLSATAPWLAANKEVAGKILKALAEAAEITRKDPPRAAQSVQAITRIPI 264 YT T L A + A + ++++AL ++ + + P +A +IP+ Sbjct: 196 IPKLYTETFNLIAMQSVIKAKPQELERVVRALKDSTQFIQTHPEKAKALAAKRLKIPV 253 >B4BMT4.1 B4BMT4_9BACI Aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein Length = 325 Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 53/218 (24%), Positives = 103/218 (47%), Gaps = 8/218 (3%) Query: 68 VSVQSYTDGGEALNALVANQVNLGCAGEPTHIVRLAR-AELRPLAVTYQSRTYLKLVARK 126 V+ + G L AL ++ AG+ I LA+ A+ R +A S ++ RK Sbjct: 68 VTWSEFNTGSSILEALNTGSIDFAVAGDIPSIFALAKGADFRYIAGEPSSPASEGILIRK 127 Query: 127 DIATAD----KIRKFGIVAGSVSEYVTGLTIRQLKLDASKIEMVRSGPPELPALLARGDI 182 ++ + K +K + S++EY+ +R L ++ V PP+ L +G++ Sbjct: 128 GLSLSSLAHLKGKKIALNKASIAEYLLVKALRSAGLSLDDVQPVYLNPPDASLALEKGEV 187 Query: 183 DAYFVWEPWPTLGVQQGGHILMTCGDVGYTSTLWLSATAPWLAANK-EVAGKILKALAEA 241 DA+ VW+P+ ++ +G +L + T + S++A +A + EV + + +L E Sbjct: 188 DAWVVWDPFLSVAESKGHRLLKDATGIVPYRTFYFSSSA--IAKHHPEVVRQFVHSLQET 245 Query: 242 AEITRKDPPRAAQSVQAITRIPIPQTLNSLKDMEPVVR 279 + +DP AAQ + +T +P+ ++ LK V+ Sbjct: 246 GKQIHQDPTEAAQLLHQVTNLPVDTWIHVLKKRNSTVQ 283 >Q7VVN1.1 Q7VVN1_BORPE ABC transport protein, periplasmic component Length = 325 Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 61/234 (26%), Positives = 105/234 (44%), Gaps = 12/234 (5%) Query: 37 PVTIGVGADPVFTAFFVAANEKLFAKYGAPNVSVQSYTDGGEALNALVANQVNLGCAGEP 96 PV G D VF +A + K +AK + + + + G AL A+VA ++ + E Sbjct: 26 PVKFATGVDAVFLPLVIAVD-KGYAKQRGVDAAYKQFASGAMALEAVVAGDADVAMSSEI 84 Query: 97 THIVRLAR-AELRPLAVTYQSRTYLKLVARKDIATADKI--RKFGIVAGSVSEYVTGLTI 153 + + A+ A+++ +A S+ + L A I A + + G+ EY Sbjct: 85 STLGPRAKGAKIKTVARGAYSKDLIGLAAISGINGAQDLVGKSVAYPKGTAGEYYMDQYF 144 Query: 154 RQLKLDASKIEMVRSGPPELPALLARGDIDAYFVWEPWPTLG--VQQGGHILMTCGDVG- 210 + + +++V PE+ LLARGD+ A F WEPW + V + ++ G G Sbjct: 145 QHYGISRDALKLVNVATPEMVPLLARGDVQAIFAWEPWFSRARSVVKDFKVVEMSGQNGI 204 Query: 211 YTSTLWLSATAPWLAANKEVAGKILKALAEAAEITR--KDPPRAAQSVQAITRI 262 YT + + +L E K L A+ +A TR DP AA++ ++R+ Sbjct: 205 YTMQFLTNFSEKFLRERPEDVKKTLLAIGDA---TRWLNDPNNAAEAAAVLSRV 255