BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0029.0013.p (158 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value D8IPH0.1 D8IPH0_HERSS NAD-dependent formate dehydrogenase gamma ... 322 1e-86 A4GAJ8.1 A4GAJ8_HERAR NAD-dependent formate dehydrogenase gamma ... 223 9e-57 A6T497.1 A6T497_JANMA Formate dehydrogenase, cytochrome b556 sub... 217 4e-55 Q0KDY3.1 Q0KDY3_CUPNH NAD-dependent formate dehydrogenase gamma ... 210 4e-53 O87813.1 O87813_CUPNE NAD-dependent formate dehydrogenase gamma ... 209 1e-52 Q1LQY7.1 Q1LQY7_RALME NAD-dependent formate dehydrogenase gamma ... 207 4e-52 B3R0Z2.1 B3R0Z2_CUPTR NAD-dependent formate dehydrogenase gamma ... 198 2e-49 Q475D4.1 Q475D4_CUPPJ NADH dehydrogenase (Ubiquinone), 24 kDa su... 194 2e-48 A2SM72.1 A2SM72_METPP NAD-dependent formate dehydrogenase gamma ... 191 3e-47 B1XWL6.1 B1XWL6_LEPCP NADH dehydrogenase (Ubiquinone) 24 kDa sub... 185 2e-45 >D8IPH0.1 D8IPH0_HERSS NAD-dependent formate dehydrogenase gamma subunit protein EC=1.2.1.2 Length = 158 Score = 322 bits (824), Expect = 1e-86, Method: Compositional matrix adjust. Identities = 157/158 (99%), Positives = 157/158 (99%) Query: 1 MKRQQVFDVAAVRGIIAERKEMAGAMLPILHGIQEKVGYIPADAVPMIAGELNVSRAEVH 60 MKRQQVFDVAAVRGIIAERKEMAGAMLPILHGIQEKVGYIPADAVPMIAGELNVSRAEVH Sbjct: 1 MKRQQVFDVAAVRGIIAERKEMAGAMLPILHGIQEKVGYIPADAVPMIAGELNVSRAEVH 60 Query: 61 GVISFYHFFRQEPAGRHVVQVCRAEACQARGSEALAEHAQNVLGCGFHDTSADGQFTLEP 120 GVISFYHFFRQEPAGRHVVQVCRAEACQARG EALAEHAQNVLGCGFHDTSADGQFTLEP Sbjct: 61 GVISFYHFFRQEPAGRHVVQVCRAEACQARGGEALAEHAQNVLGCGFHDTSADGQFTLEP 120 Query: 121 VYCLGQCAIGPNLTLDDELHARVDADKFKRLIQAKREA 158 VYCLGQCAIGPNLTLDDELHARVDADKFKRLIQAKREA Sbjct: 121 VYCLGQCAIGPNLTLDDELHARVDADKFKRLIQAKREA 158 >A4GAJ8.1 A4GAJ8_HERAR NAD-dependent formate dehydrogenase gamma subunit EC=1.2.1.2 Length = 159 Score = 223 bits (567), Expect = 9e-57, Method: Compositional matrix adjust. Identities = 102/156 (65%), Positives = 124/156 (79%) Query: 1 MKRQQVFDVAAVRGIIAERKEMAGAMLPILHGIQEKVGYIPADAVPMIAGELNVSRAEVH 60 M + FD+AAV IIA RKEM GA+LPILH IQ VGYIP+ VP IA LN+SRAEVH Sbjct: 1 MSAEHSFDMAAVESIIASRKEMPGALLPILHDIQNTVGYIPSLVVPAIADGLNISRAEVH 60 Query: 61 GVISFYHFFRQEPAGRHVVQVCRAEACQARGSEALAEHAQNVLGCGFHDTSADGQFTLEP 120 GVI++YHFFRQ PAG+HV+Q+CRAEACQARG E+L +HA+ +LGC FH + DG+F+LE Sbjct: 61 GVITYYHFFRQHPAGKHVIQICRAEACQARGCESLVDHAKELLGCDFHQITDDGKFSLEV 120 Query: 121 VYCLGQCAIGPNLTLDDELHARVDADKFKRLIQAKR 156 VYCLGQCA GP + +DD+L+ARV +KF LIQAKR Sbjct: 121 VYCLGQCASGPAIQIDDDLYARVSKEKFNNLIQAKR 156 >A6T497.1 A6T497_JANMA Formate dehydrogenase, cytochrome b556 subunit (Formate dehydrogenase gamma subunit) EC=1.2.1.2 Length = 159 Score = 217 bits (553), Expect = 4e-55, Method: Compositional matrix adjust. Identities = 102/156 (65%), Positives = 121/156 (77%) Query: 1 MKRQQVFDVAAVRGIIAERKEMAGAMLPILHGIQEKVGYIPADAVPMIAGELNVSRAEVH 60 M Q FD+AAV IIA+RK GA+LPILH IQ VGYIP VP IA LN+SRAEVH Sbjct: 1 MNTQTPFDLAAVEAIIAQRKATPGALLPILHDIQGVVGYIPPSIVPAIAEGLNISRAEVH 60 Query: 61 GVISFYHFFRQEPAGRHVVQVCRAEACQARGSEALAEHAQNVLGCGFHDTSADGQFTLEP 120 GVI++YHFFRQ P G HVVQ+CRAEACQARG E+LA+HA+ +LGC FH T+ D +FTL+ Sbjct: 61 GVITYYHFFRQHPVGEHVVQICRAEACQARGCESLADHAKELLGCDFHGTTDDNKFTLQT 120 Query: 121 VYCLGQCAIGPNLTLDDELHARVDADKFKRLIQAKR 156 VYCLGQCA GP + +DD+L+ARV +KF LIQAKR Sbjct: 121 VYCLGQCASGPAIQIDDDLYARVSKEKFNSLIQAKR 156 >Q0KDY3.1 Q0KDY3_CUPNH NAD-dependent formate dehydrogenase gamma subunit EC=1.2.1.2 Length = 176 Score = 210 bits (535), Expect = 4e-53, Method: Compositional matrix adjust. Identities = 98/151 (64%), Positives = 122/151 (80%) Query: 8 DVAAVRGIIAERKEMAGAMLPILHGIQEKVGYIPADAVPMIAGELNVSRAEVHGVISFYH 67 D + I+A R+++ GA+LPILH IQ+ GYIP AVP+IA LN+SRAEVHGVI+FYH Sbjct: 13 DATRIAAIVAARQDIPGALLPILHEIQDTQGYIPDAAVPVIARALNLSRAEVHGVITFYH 72 Query: 68 FFRQEPAGRHVVQVCRAEACQARGSEALAEHAQNVLGCGFHDTSADGQFTLEPVYCLGQC 127 FRQ+PAGRHVVQVCRAEACQ+ G+EALAEHAQ LGCGFH+T+ADGQ TLEPVYCLGQC Sbjct: 73 HFRQQPAGRHVVQVCRAEACQSVGAEALAEHAQRALGCGFHETTADGQVTLEPVYCLGQC 132 Query: 128 AIGPNLTLDDELHARVDADKFKRLIQAKREA 158 A GP + + ++LH VDA +F L+++ RE+ Sbjct: 133 ACGPAVMVGEQLHGYVDARRFDALVRSLRES 163 >O87813.1 O87813_CUPNE NAD-dependent formate dehydrogenase gamma subunit EC=1.2.1.2 Length = 176 Score = 209 bits (532), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 97/151 (64%), Positives = 122/151 (80%) Query: 8 DVAAVRGIIAERKEMAGAMLPILHGIQEKVGYIPADAVPMIAGELNVSRAEVHGVISFYH 67 D + I+A R+++ GA+LPILH IQ+ GYIP AVP+IA LN+SRA+VHGVI+FYH Sbjct: 13 DATRIAAIVAARQDIPGALLPILHEIQDTQGYIPDAAVPVIARALNLSRADVHGVITFYH 72 Query: 68 FFRQEPAGRHVVQVCRAEACQARGSEALAEHAQNVLGCGFHDTSADGQFTLEPVYCLGQC 127 FRQ+PAGRHVVQVCRAEACQ+ G+EALAEHAQ LGCGFH+T+ADGQ TLEPVYCLGQC Sbjct: 73 HFRQQPAGRHVVQVCRAEACQSVGAEALAEHAQRALGCGFHETTADGQVTLEPVYCLGQC 132 Query: 128 AIGPNLTLDDELHARVDADKFKRLIQAKREA 158 A GP + + ++LH VDA +F L+++ RE+ Sbjct: 133 ACGPAVMVGEQLHGYVDARRFDALVRSLRES 163 >Q1LQY7.1 Q1LQY7_RALME NAD-dependent formate dehydrogenase gamma subunit EC=1.2.1.2 Length = 169 Score = 207 bits (527), Expect = 4e-52, Method: Compositional matrix adjust. Identities = 96/143 (67%), Positives = 117/143 (81%) Query: 15 IIAERKEMAGAMLPILHGIQEKVGYIPADAVPMIAGELNVSRAEVHGVISFYHFFRQEPA 74 I+A R++M GA+LPILH IQ+ G+IPADAV ++A LN+SRAEVHGVI+FYH FR+ PA Sbjct: 21 IVAARRDMPGALLPILHDIQDSQGFIPADAVSVVARALNLSRAEVHGVITFYHHFRERPA 80 Query: 75 GRHVVQVCRAEACQARGSEALAEHAQNVLGCGFHDTSADGQFTLEPVYCLGQCAIGPNLT 134 GR VVQVCRAEACQ+ G++ALA HA+ LGC FH+T+ADGQFTLEPVYCLGQCA GP +T Sbjct: 81 GRTVVQVCRAEACQSVGADALAAHARKALGCDFHETTADGQFTLEPVYCLGQCACGPAMT 140 Query: 135 LDDELHARVDADKFKRLIQAKRE 157 + D LH RVD +F +LI A RE Sbjct: 141 IGDRLHGRVDMQRFDKLIDAVRE 163 >B3R0Z2.1 B3R0Z2_CUPTR NAD-dependent formate dehydrogenase gamma subunit Length = 181 Score = 198 bits (504), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 94/137 (68%), Positives = 111/137 (81%) Query: 20 KEMAGAMLPILHGIQEKVGYIPADAVPMIAGELNVSRAEVHGVISFYHFFRQEPAGRHVV 79 + M GA+LPILH IQ+ G+IP AVP+IA LN+SRAEVHGVI+FYH FRQ+PAGRHVV Sbjct: 31 QHMPGALLPILHEIQDTQGFIPDTAVPVIARALNLSRAEVHGVITFYHHFRQQPAGRHVV 90 Query: 80 QVCRAEACQARGSEALAEHAQNVLGCGFHDTSADGQFTLEPVYCLGQCAIGPNLTLDDEL 139 QVCRAEACQA G+ ALAEHAQ LGCGFH+TSADGQ TLEPVYCLGQCA GP + + ++L Sbjct: 91 QVCRAEACQAVGAGALAEHAQRALGCGFHETSADGQVTLEPVYCLGQCACGPAVMVGEQL 150 Query: 140 HARVDADKFKRLIQAKR 156 H VDA +F L++ R Sbjct: 151 HGYVDAARFDALVRTLR 167 >Q475D4.1 Q475D4_CUPPJ NADH dehydrogenase (Ubiquinone), 24 kDa subunit Length = 179 Score = 194 bits (494), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 91/137 (66%), Positives = 111/137 (81%) Query: 20 KEMAGAMLPILHGIQEKVGYIPADAVPMIAGELNVSRAEVHGVISFYHFFRQEPAGRHVV 79 ++M GA+LPILH IQ+ GYIP AVP+IA LN+SRAEVHGVI+FYH FRQ+PAGRHVV Sbjct: 28 QDMPGALLPILHEIQDTHGYIPDTAVPVIAKALNLSRAEVHGVITFYHHFRQQPAGRHVV 87 Query: 80 QVCRAEACQARGSEALAEHAQNVLGCGFHDTSADGQFTLEPVYCLGQCAIGPNLTLDDEL 139 QVCRAEACQ+ G+EALAEHA+ LGC FH+T+ADG TLEPVYCLGQCA GP + + ++L Sbjct: 88 QVCRAEACQSVGAEALAEHAKRALGCDFHETTADGAVTLEPVYCLGQCACGPAVMMGEQL 147 Query: 140 HARVDADKFKRLIQAKR 156 H VDA +F L++ R Sbjct: 148 HGYVDAKRFDVLVRKLR 164 >A2SM72.1 A2SM72_METPP NAD-dependent formate dehydrogenase gamma subunit EC=1.2.1.2 Length = 161 Score = 191 bits (485), Expect = 3e-47, Method: Compositional matrix adjust. Identities = 90/147 (61%), Positives = 114/147 (77%) Query: 8 DVAAVRGIIAERKEMAGAMLPILHGIQEKVGYIPADAVPMIAGELNVSRAEVHGVISFYH 67 +AAVR ++A R + GA+LPILH +Q+++G IPADAVP IAG LN+SRAEVHGVI++YH Sbjct: 4 SLAAVRAVLARRADEPGALLPILHEVQDQLGCIPADAVPEIAGALNLSRAEVHGVITYYH 63 Query: 68 FFRQEPAGRHVVQVCRAEACQARGSEALAEHAQNVLGCGFHDTSADGQFTLEPVYCLGQC 127 FR EPAGRHV+QVCRAEACQA G+EAL HA+ L C H +S+DG++TLEPV+CLG C Sbjct: 64 HFRGEPAGRHVIQVCRAEACQALGAEALLTHAERRLVCRSHASSSDGRYTLEPVFCLGLC 123 Query: 128 AIGPNLTLDDELHARVDADKFKRLIQA 154 A P + +D+ LHAR+ F RLI A Sbjct: 124 ASSPAIVIDERLHARISPAAFDRLIGA 150 >B1XWL6.1 B1XWL6_LEPCP NADH dehydrogenase (Ubiquinone) 24 kDa subunit Length = 173 Score = 185 bits (469), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 91/158 (57%), Positives = 115/158 (72%), Gaps = 3/158 (1%) Query: 1 MKRQQVFD--VAAVRGIIAERKEMAGAMLPILHGIQEKVGYIPADAVPMIAGELNVSRAE 58 M R Q D +A VR +IAER +AGA+LPILHG+Q+ +G+IP++AVP IA LN+SRAE Sbjct: 1 MNRPQDADAALATVRAVIAERAHLAGALLPILHGVQDAIGHIPSEAVPEIARALNLSRAE 60 Query: 59 VHGVISFYHFFRQEPAGRHVVQVCRAEACQARGSEALAEHAQNVLGCGFH-DTSADGQFT 117 VHGVI++YH FR EPAGRHV+QVCRAE+CQARG EAL A+ LGC SADG ++ Sbjct: 61 VHGVITYYHHFRAEPAGRHVLQVCRAESCQARGGEALLAQARERLGCSADVHRSADGAWS 120 Query: 118 LEPVYCLGQCAIGPNLTLDDELHARVDADKFKRLIQAK 155 +EPVYCLG CA P + +D+ HARV A + L+ A Sbjct: 121 VEPVYCLGLCASSPAIQIDERQHARVTATRLDALLDAT 158