BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0027.0316.p (126 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value D8INQ8.1 D8INQ8_HERSS Membrane protein 243 6e-63 Q2L0K1.1 Q2L0K1_BORA1 Putative membrane protein 153 7e-36 E3HGX1.1 E3HGX1_ACHXA Putative uncharacterized protein 141 4e-32 Q7WIF2.1 Q7WIF2_BORBR Putative membrane protein 126 9e-28 Q7W6I0.1 Q7W6I0_BORPA Putative membrane protein 126 9e-28 Q7VYM9.1 Q7VYM9_BORPE Putative membrane protein 126 9e-28 D4XDJ5.1 D4XDJ5_9BURK Putative uncharacterized protein 125 2e-27 E1MQ90.1 E1MQ90_9GAMM Putative uncharacterized protein 122 2e-26 Q65DP3.1 Q65DP3_BACLD YwdK 121 4e-26 E5W964.1 E5W964_9BACI YwdK protein 121 4e-26 >D8INQ8.1 D8INQ8_HERSS Membrane protein Length = 126 Score = 243 bits (620), Expect = 6e-63, Method: Compositional matrix adjust. Identities = 125/126 (99%), Positives = 126/126 (100%) Query: 1 MKERTLIALGALNMFVAVGCGAFGAHGLKKMISEEMLAIWHTAVTYQVMHALGMIAVALL 60 MKERTLIALGALNMF+AVGCGAFGAHGLKKMISEEMLAIWHTAVTYQVMHALGMIAVALL Sbjct: 1 MKERTLIALGALNMFIAVGCGAFGAHGLKKMISEEMLAIWHTAVTYQVMHALGMIAVALL 60 Query: 61 MPRLGGAALRWAGVLMLAGIVVFSGSLYLLALTGTRMLGAITPFGGVGFLAAWLLVAWAA 120 MPRLGGAALRWAGVLMLAGIVVFSGSLYLLALTGTRMLGAITPFGGVGFLAAWLLVAWAA Sbjct: 61 MPRLGGAALRWAGVLMLAGIVVFSGSLYLLALTGTRMLGAITPFGGVGFLAAWLLVAWAA 120 Query: 121 CKQPAK 126 CKQPAK Sbjct: 121 CKQPAK 126 >Q2L0K1.1 Q2L0K1_BORA1 Putative membrane protein Length = 125 Score = 153 bits (387), Expect = 7e-36, Method: Compositional matrix adjust. Identities = 78/124 (62%), Positives = 94/124 (75%) Query: 1 MKERTLIALGALNMFVAVGCGAFGAHGLKKMISEEMLAIWHTAVTYQVMHALGMIAVALL 60 M +R I L ALNM +AVG GAFGAHGLK+++ +MLA+W T V YQ++HALG+ AVA L Sbjct: 1 MPDRPFIILAALNMIIAVGAGAFGAHGLKRVLDADMLAVWQTGVLYQLVHALGLFAVAWL 60 Query: 61 MPRLGGAALRWAGVLMLAGIVVFSGSLYLLALTGTRMLGAITPFGGVGFLAAWLLVAWAA 120 R GA L AG LM AGIV+FSGSLYLLA+TGTR+LGAITP GGV FL +W L+AWA Sbjct: 61 TTRYNGALLPLAGWLMFAGIVLFSGSLYLLAVTGTRLLGAITPLGGVAFLLSWALIAWAV 120 Query: 121 CKQP 124 + P Sbjct: 121 IRNP 124 >E3HGX1.1 E3HGX1_ACHXA Putative uncharacterized protein Length = 125 Score = 141 bits (355), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 73/122 (59%), Positives = 92/122 (75%) Query: 1 MKERTLIALGALNMFVAVGCGAFGAHGLKKMISEEMLAIWHTAVTYQVMHALGMIAVALL 60 M +R L L ALN+ VAVG GAFGAHGLK+M++ E+L++W T V Y ++HALG+ VALL Sbjct: 1 MTDRQLTILAALNLMVAVGAGAFGAHGLKRMLTPELLSVWQTGVLYHLIHALGLFVVALL 60 Query: 61 MPRLGGAALRWAGVLMLAGIVVFSGSLYLLALTGTRMLGAITPFGGVGFLAAWLLVAWAA 120 R G L AGV+M GIV+FSGSLY+L+LTGT LGA+TPFGGV FLA+W +VA AA Sbjct: 61 GARYGSPLLSAAGVVMFVGIVLFSGSLYVLSLTGTHWLGAVTPFGGVAFLASWAMVALAA 120 Query: 121 CK 122 + Sbjct: 121 YR 122 >Q7WIF2.1 Q7WIF2_BORBR Putative membrane protein Length = 125 Score = 126 bits (317), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 65/110 (59%), Positives = 81/110 (73%) Query: 1 MKERTLIALGALNMFVAVGCGAFGAHGLKKMISEEMLAIWHTAVTYQVMHALGMIAVALL 60 M +R LI L ALN+ VAVG GAFGAHGL++++ +LAIWHT V Y ++HALG+ VALL Sbjct: 1 MTDRQLIVLAALNIMVAVGAGAFGAHGLRRVVDPTLLAIWHTGVLYHLIHALGLFVVALL 60 Query: 61 MPRLGGAALRWAGVLMLAGIVVFSGSLYLLALTGTRMLGAITPFGGVGFL 110 R G L AG++M GI++F GSLY+L LTGTR LGA+TP GGV FL Sbjct: 61 GARFGSPLLSMAGLVMFIGILLFCGSLYVLVLTGTRWLGAVTPLGGVAFL 110 >Q7W6I0.1 Q7W6I0_BORPA Putative membrane protein Length = 125 Score = 126 bits (317), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 65/110 (59%), Positives = 81/110 (73%) Query: 1 MKERTLIALGALNMFVAVGCGAFGAHGLKKMISEEMLAIWHTAVTYQVMHALGMIAVALL 60 M +R LI L ALN+ VAVG GAFGAHGL++++ +LAIWHT V Y ++HALG+ VALL Sbjct: 1 MTDRQLIVLAALNIMVAVGAGAFGAHGLRRVVDPTLLAIWHTGVLYHLIHALGLFVVALL 60 Query: 61 MPRLGGAALRWAGVLMLAGIVVFSGSLYLLALTGTRMLGAITPFGGVGFL 110 R G L AG++M GI++F GSLY+L LTGTR LGA+TP GGV FL Sbjct: 61 GARFGSPLLSMAGLVMFIGILLFCGSLYVLVLTGTRWLGAVTPLGGVAFL 110 >Q7VYM9.1 Q7VYM9_BORPE Putative membrane protein Length = 125 Score = 126 bits (317), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 65/110 (59%), Positives = 81/110 (73%) Query: 1 MKERTLIALGALNMFVAVGCGAFGAHGLKKMISEEMLAIWHTAVTYQVMHALGMIAVALL 60 M +R LI L ALN+ VAVG GAFGAHGL++++ +LAIWHT V Y ++HALG+ VALL Sbjct: 1 MTDRQLIVLAALNIMVAVGAGAFGAHGLRRVVDPTLLAIWHTGVLYHLIHALGLFVVALL 60 Query: 61 MPRLGGAALRWAGVLMLAGIVVFSGSLYLLALTGTRMLGAITPFGGVGFL 110 R G L AG++M GI++F GSLY+L LTGTR LGA+TP GGV FL Sbjct: 61 GARFGSPLLSMAGLVMFIGILLFCGSLYVLVLTGTRWLGAVTPLGGVAFL 110 >D4XDJ5.1 D4XDJ5_9BURK Putative uncharacterized protein Length = 125 Score = 125 bits (314), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 64/110 (58%), Positives = 80/110 (72%) Query: 1 MKERTLIALGALNMFVAVGCGAFGAHGLKKMISEEMLAIWHTAVTYQVMHALGMIAVALL 60 M +R L L ALN+ VAVG GAFGAHGLK+M+S E+L++W T V Y ++HA+G+ +ALL Sbjct: 1 MTDRQLTILAALNLMVAVGAGAFGAHGLKRMLSPELLSVWQTGVLYHLIHAMGLFVIALL 60 Query: 61 MPRLGGAALRWAGVLMLAGIVVFSGSLYLLALTGTRMLGAITPFGGVGFL 110 R G L AGV+M GIV+FSGSLY L+LTG LGA+TP GGV FL Sbjct: 61 GARFGSPLLSAAGVVMFVGIVLFSGSLYTLSLTGVHWLGAVTPLGGVAFL 110 >E1MQ90.1 E1MQ90_9GAMM Putative uncharacterized protein Length = 134 Score = 122 bits (305), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 68/116 (58%), Positives = 84/116 (72%), Gaps = 1/116 (0%) Query: 3 ERTLIALGALNMFVAVGCGAFGAHGLKKMISEEMLAIWHTAVTYQVMHALGMIAVALLMP 62 + ++LGAL+ + VG GAFGAHGLK +IS EML ++ T VTYQ+ HALG+I VAL+ Sbjct: 2 KSIFLSLGALSALIGVGMGAFGAHGLKTIISPEMLTVYQTGVTYQMYHALGLIGVALIHR 61 Query: 63 RLGGAA-LRWAGVLMLAGIVVFSGSLYLLALTGTRMLGAITPFGGVGFLAAWLLVA 117 + + L WAG LM AGI++FSGSLY LAL LG ITPFGGV FLAAWLL+A Sbjct: 62 QAPDSKLLHWAGWLMFAGILLFSGSLYALALLNHTWLGMITPFGGVCFLAAWLLIA 117 >Q65DP3.1 Q65DP3_BACLD YwdK Length = 125 Score = 121 bits (303), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 68/123 (55%), Positives = 88/123 (71%), Gaps = 1/123 (0%) Query: 1 MKERTLIALGALNMFVAVGCGAFGAHGLKKMISEEMLAIWHTAVTYQVMHALGMIAVALL 60 M + + LGA+N +AV GAFGAHGL+ I E+ L IW T V Y + HALG+IAVAL+ Sbjct: 1 MIVKLFLILGAVNAMLAVALGAFGAHGLEGKIPEKYLQIWQTGVQYHMYHALGLIAVALI 60 Query: 61 MPRLGGA-ALRWAGVLMLAGIVVFSGSLYLLALTGTRMLGAITPFGGVGFLAAWLLVAWA 119 +L GA ++ AG LM AGIV+FSGSLY+L+LT +LGAITP GGV F+AAW++V + Sbjct: 61 ASKLAGAGSVSAAGWLMFAGIVLFSGSLYVLSLTQISVLGAITPLGGVAFIAAWIMVVVS 120 Query: 120 ACK 122 A K Sbjct: 121 AVK 123 >E5W964.1 E5W964_9BACI YwdK protein Length = 123 Score = 121 bits (303), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 67/120 (55%), Positives = 87/120 (72%), Gaps = 1/120 (0%) Query: 4 RTLIALGALNMFVAVGCGAFGAHGLKKMISEEMLAIWHTAVTYQVMHALGMIAVALLMPR 63 + + LGA+N +AV GAFGAHGL+ I E+ L IW T V Y + HALG+IAVAL+ + Sbjct: 2 KLFLILGAVNAMLAVALGAFGAHGLEGKIPEKYLQIWQTGVQYHMYHALGLIAVALIASK 61 Query: 64 LGGA-ALRWAGVLMLAGIVVFSGSLYLLALTGTRMLGAITPFGGVGFLAAWLLVAWAACK 122 L GA ++ AG LM AGIV+FSGSLY+L+LT +LGAITP GGV F+AAW++V +A K Sbjct: 62 LAGAVSVSAAGWLMFAGIVLFSGSLYVLSLTQISVLGAITPLGGVAFIAAWIMVVVSAVK 121