BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0027.0285.p (311 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value D8INT4.1 D8INT4_HERSS Preprotein translocase subunit SecF protein 538 e-151 A6SUU7.1 A6SUU7_JANMA Preprotein translocase SecF subunit 436 e-120 B7X296.1 B7X296_COMTE Protein-export membrane protein SecF 424 e-117 D0IY86.1 D0IY86_COMT2 Protein-export membrane protein SecF 424 e-116 D8D7J1.1 D8D7J1_COMTE Preprotein translocase subunit SecF 424 e-116 A4G1Z6.2 A4G1Z6_HERAR Protein-export membrane protein SecF 421 e-116 A1WCY3.1 A1WCY3_ACISJ Protein translocase subunit secF 416 e-114 B9MHS2.1 B9MHS2_ACIET Protein-export membrane protein SecF 414 e-114 C5T8N8.1 C5T8N8_ACIDE Protein-export membrane protein SecF 414 e-113 B3R6J7.1 B3R6J7_CUPTR Protein-export membrane protein 411 e-113 >D8INT4.1 D8INT4_HERSS Preprotein translocase subunit SecF protein Length = 314 Score = 538 bits (1386), Expect = e-151, Method: Compositional matrix adjust. Identities = 265/265 (100%), Positives = 265/265 (100%) Query: 1 MEFFRIKKDIPFMRHALIFNAISALTFVAAVFFLFSKGLHFSIEFTGGTVMEVAYNKPAD 60 MEFFRIKKDIPFMRHALIFNAISALTFVAAVFFLFSKGLHFSIEFTGGTVMEVAYNKPAD Sbjct: 1 MEFFRIKKDIPFMRHALIFNAISALTFVAAVFFLFSKGLHFSIEFTGGTVMEVAYNKPAD 60 Query: 61 LEKIRKSIEGLGYRDTLVQSFGTAQDVMIRLPAQAGVNASQQTEKVNAALKADDPDVRLQ 120 LEKIRKSIEGLGYRDTLVQSFGTAQDVMIRLPAQAGVNASQQTEKVNAALKADDPDVRLQ Sbjct: 61 LEKIRKSIEGLGYRDTLVQSFGTAQDVMIRLPAQAGVNASQQTEKVNAALKADDPDVRLQ 120 Query: 121 RVEFVGPQVGDELAHDGLLALGMVVLGIVIYLAFRFEWKFAVAAVIANLHDIIIILGFFA 180 RVEFVGPQVGDELAHDGLLALGMVVLGIVIYLAFRFEWKFAVAAVIANLHDIIIILGFFA Sbjct: 121 RVEFVGPQVGDELAHDGLLALGMVVLGIVIYLAFRFEWKFAVAAVIANLHDIIIILGFFA 180 Query: 181 FFQWEFSLTVLAAILAVLGYSVNESVVVFDRVREAFRDRRFGKLSPPEVLNHAITSTMSR 240 FFQWEFSLTVLAAILAVLGYSVNESVVVFDRVREAFRDRRFGKLSPPEVLNHAITSTMSR Sbjct: 181 FFQWEFSLTVLAAILAVLGYSVNESVVVFDRVREAFRDRRFGKLSPPEVLNHAITSTMSR 240 Query: 241 TVITHGSTEMMVLAMFFFGGPTLHY 265 TVITHGSTEMMVLAMFFFGGPTLHY Sbjct: 241 TVITHGSTEMMVLAMFFFGGPTLHY 265 >A6SUU7.1 A6SUU7_JANMA Preprotein translocase SecF subunit Length = 314 Score = 436 bits (1121), Expect = e-120, Method: Compositional matrix adjust. Identities = 206/265 (77%), Positives = 234/265 (88%) Query: 1 MEFFRIKKDIPFMRHALIFNAISALTFVAAVFFLFSKGLHFSIEFTGGTVMEVAYNKPAD 60 MEFFRIKKDIPFMRHALIFN ISALTFVAAVFFL +GLH SIEFTGGTVMEV Y++PAD Sbjct: 1 MEFFRIKKDIPFMRHALIFNVISALTFVAAVFFLLHRGLHLSIEFTGGTVMEVTYSQPAD 60 Query: 61 LEKIRKSIEGLGYRDTLVQSFGTAQDVMIRLPAQAGVNASQQTEKVNAALKADDPDVRLQ 120 +E +R + LGY D VQSFGTAQDV+IRLP Q +++Q +E+V ALKA D V L+ Sbjct: 61 IEGVRGKLTDLGYVDMQVQSFGTAQDVLIRLPVQKNADSAQISERVIGALKAQDSTVELK 120 Query: 121 RVEFVGPQVGDELAHDGLLALGMVVLGIVIYLAFRFEWKFAVAAVIANLHDIIIILGFFA 180 RVEFVGPQVGDEL HDGL+ALGM+V+GIVIYLAFRFEWK+AV+A++ANLHD++IILGFFA Sbjct: 121 RVEFVGPQVGDELTHDGLMALGMLVIGIVIYLAFRFEWKYAVSAILANLHDVVIILGFFA 180 Query: 181 FFQWEFSLTVLAAILAVLGYSVNESVVVFDRVREAFRDRRFGKLSPPEVLNHAITSTMSR 240 FFQWEFSLTVLAA+LAVLGYSVNESVVVFDRVRE FRDRRFGK+ EVLNHAIT T+SR Sbjct: 181 FFQWEFSLTVLAAVLAVLGYSVNESVVVFDRVRETFRDRRFGKMPTEEVLNHAITQTISR 240 Query: 241 TVITHGSTEMMVLAMFFFGGPTLHY 265 TVITHGST++MVL+M FFGGPTLHY Sbjct: 241 TVITHGSTQLMVLSMLFFGGPTLHY 265 >B7X296.1 B7X296_COMTE Protein-export membrane protein SecF Length = 318 Score = 424 bits (1090), Expect = e-117, Method: Compositional matrix adjust. Identities = 200/265 (75%), Positives = 236/265 (89%), Gaps = 2/265 (0%) Query: 1 MEFFRIKKDIPFMRHALIFNAISALTFVAAVFFLFSKGLHFSIEFTGGTVMEVAYNKPAD 60 MEFFRIKKDIPFMR+AL+FNAIS +TF AVFFLFS+GLH S+EFTGGTVMEVAY +PAD Sbjct: 1 MEFFRIKKDIPFMRYALVFNAISFITFALAVFFLFSRGLHLSVEFTGGTVMEVAYTQPAD 60 Query: 61 LEKIRKSIEGLGYRDTLVQSFGTAQDVMIRLPAQAGVNASQQTEKVNAALKADDPDVRLQ 120 + K+R+++ LGY D +VQ+FGT++DVMIRLP Q GV +QQ+E+V ALKA+D +V L+ Sbjct: 61 IGKVRETVSKLGYADVIVQNFGTSKDVMIRLPVQKGVTTAQQSEQVITALKAEDAEVTLR 120 Query: 121 RVEFVGPQVGDELAHDGLLALGMVVLGIVIYLAFRFEWKFAVAAVIANLHDIIIILGFFA 180 R EFVGPQVGDEL H+GL+ALGMVVLGI+IYLAFRFEWKF VAA+IANLHD+IIILGFFA Sbjct: 121 RTEFVGPQVGDELMHNGLMALGMVVLGIIIYLAFRFEWKFGVAAIIANLHDVIIILGFFA 180 Query: 181 FFQWEFSLTVLAAILAVLGYSVNESVVVFDRVREAFRDRRFGKLSPPEVLNHAITSTMSR 240 FFQWEFSL+VLA +LAVLGYSVNESVV+FDR+REAF R+F KLS EV++HAITSTMSR Sbjct: 181 FFQWEFSLSVLAGVLAVLGYSVNESVVIFDRIREAF--RKFRKLSTHEVIDHAITSTMSR 238 Query: 241 TVITHGSTEMMVLAMFFFGGPTLHY 265 T+ITH STE MVL+MFFFGGP+LHY Sbjct: 239 TIITHASTEAMVLSMFFFGGPSLHY 263 >D0IY86.1 D0IY86_COMT2 Protein-export membrane protein SecF Length = 318 Score = 424 bits (1089), Expect = e-116, Method: Compositional matrix adjust. Identities = 199/265 (75%), Positives = 236/265 (89%), Gaps = 2/265 (0%) Query: 1 MEFFRIKKDIPFMRHALIFNAISALTFVAAVFFLFSKGLHFSIEFTGGTVMEVAYNKPAD 60 MEFFRIKKDIPFM++AL+FNAIS +TF AVFFLFS+GLH S+EFTGGTVMEVAY +PAD Sbjct: 1 MEFFRIKKDIPFMKYALVFNAISFITFALAVFFLFSRGLHLSVEFTGGTVMEVAYTQPAD 60 Query: 61 LEKIRKSIEGLGYRDTLVQSFGTAQDVMIRLPAQAGVNASQQTEKVNAALKADDPDVRLQ 120 + K+R+++ LGY D +VQ+FGT++DVMIRLP Q GV +QQ+E+V ALKA+D +V L+ Sbjct: 61 IGKVRETVSKLGYADVIVQNFGTSKDVMIRLPVQKGVTTAQQSERVITALKAEDAEVTLR 120 Query: 121 RVEFVGPQVGDELAHDGLLALGMVVLGIVIYLAFRFEWKFAVAAVIANLHDIIIILGFFA 180 R EFVGPQVGDEL H+GL+ALGMVVLGI+IYLAFRFEWKF VAA+IANLHD+IIILGFFA Sbjct: 121 RTEFVGPQVGDELMHNGLMALGMVVLGIIIYLAFRFEWKFGVAAIIANLHDVIIILGFFA 180 Query: 181 FFQWEFSLTVLAAILAVLGYSVNESVVVFDRVREAFRDRRFGKLSPPEVLNHAITSTMSR 240 FFQWEFSL+VLA +LAVLGYSVNESVV+FDR+REAF R+F KLS EV++HAITSTMSR Sbjct: 181 FFQWEFSLSVLAGVLAVLGYSVNESVVIFDRIREAF--RKFRKLSTHEVIDHAITSTMSR 238 Query: 241 TVITHGSTEMMVLAMFFFGGPTLHY 265 T+ITH STE MVL+MFFFGGP+LHY Sbjct: 239 TIITHASTEAMVLSMFFFGGPSLHY 263 >D8D7J1.1 D8D7J1_COMTE Preprotein translocase subunit SecF Length = 318 Score = 424 bits (1089), Expect = e-116, Method: Compositional matrix adjust. Identities = 199/265 (75%), Positives = 236/265 (89%), Gaps = 2/265 (0%) Query: 1 MEFFRIKKDIPFMRHALIFNAISALTFVAAVFFLFSKGLHFSIEFTGGTVMEVAYNKPAD 60 MEFFRIKKDIPFM++AL+FNAIS +TF AVFFLFS+GLH S+EFTGGTVMEVAY +PAD Sbjct: 1 MEFFRIKKDIPFMKYALVFNAISFITFALAVFFLFSRGLHLSVEFTGGTVMEVAYTQPAD 60 Query: 61 LEKIRKSIEGLGYRDTLVQSFGTAQDVMIRLPAQAGVNASQQTEKVNAALKADDPDVRLQ 120 + K+R+++ LGY D +VQ+FGT++DVMIRLP Q GV +QQ+E+V ALKA+D +V L+ Sbjct: 61 IGKVRETVSKLGYADVIVQNFGTSKDVMIRLPVQKGVTTAQQSERVITALKAEDAEVTLR 120 Query: 121 RVEFVGPQVGDELAHDGLLALGMVVLGIVIYLAFRFEWKFAVAAVIANLHDIIIILGFFA 180 R EFVGPQVGDEL H+GL+ALGMVVLGI+IYLAFRFEWKF VAA+IANLHD+IIILGFFA Sbjct: 121 RTEFVGPQVGDELMHNGLMALGMVVLGIIIYLAFRFEWKFGVAAIIANLHDVIIILGFFA 180 Query: 181 FFQWEFSLTVLAAILAVLGYSVNESVVVFDRVREAFRDRRFGKLSPPEVLNHAITSTMSR 240 FFQWEFSL+VLA +LAVLGYSVNESVV+FDR+REAF R+F KLS EV++HAITSTMSR Sbjct: 181 FFQWEFSLSVLAGVLAVLGYSVNESVVIFDRIREAF--RKFRKLSTHEVIDHAITSTMSR 238 Query: 241 TVITHGSTEMMVLAMFFFGGPTLHY 265 T+ITH STE MVL+MFFFGGP+LHY Sbjct: 239 TIITHASTEAMVLSMFFFGGPSLHY 263 >A4G1Z6.2 A4G1Z6_HERAR Protein-export membrane protein SecF Length = 315 Score = 421 bits (1082), Expect = e-116, Method: Compositional matrix adjust. Identities = 197/265 (74%), Positives = 229/265 (86%) Query: 1 MEFFRIKKDIPFMRHALIFNAISALTFVAAVFFLFSKGLHFSIEFTGGTVMEVAYNKPAD 60 MEFFRIKKDIPFMRHALIFN IS LTFVAAVFFL KGLH SIEFTGGTVME+ Y KPA+ Sbjct: 2 MEFFRIKKDIPFMRHALIFNVISVLTFVAAVFFLVHKGLHLSIEFTGGTVMEITYPKPAN 61 Query: 61 LEKIRKSIEGLGYRDTLVQSFGTAQDVMIRLPAQAGVNASQQTEKVNAALKADDPDVRLQ 120 +E +R + LGY D VQSFGTAQDV+IRLP Q VN +Q +E+V ALKA D V L+ Sbjct: 62 IEGVRTKLGELGYTDMQVQSFGTAQDVLIRLPVQQNVNTAQVSERVMTALKAQDETVSLK 121 Query: 121 RVEFVGPQVGDELAHDGLLALGMVVLGIVIYLAFRFEWKFAVAAVIANLHDIIIILGFFA 180 RVEFVGPQVG+EL HDGL+A+GM+V+G++IYLA RFEWK+AVAA+ ANLHD++IILGFFA Sbjct: 122 RVEFVGPQVGEELTHDGLMAMGMLVIGVMIYLAIRFEWKYAVAAIFANLHDVVIILGFFA 181 Query: 181 FFQWEFSLTVLAAILAVLGYSVNESVVVFDRVREAFRDRRFGKLSPPEVLNHAITSTMSR 240 FFQWEFSLTVLA ILAVLGYSVNESV+VFDRVRE FRDR+ GK++ +V+NHAIT T+SR Sbjct: 182 FFQWEFSLTVLAGILAVLGYSVNESVIVFDRVRETFRDRKHGKMAVADVMNHAITGTISR 241 Query: 241 TVITHGSTEMMVLAMFFFGGPTLHY 265 T+ITHGST++MVL+MFF GGPTLHY Sbjct: 242 TLITHGSTQLMVLSMFFLGGPTLHY 266 >A1WCY3.1 A1WCY3_ACISJ Protein translocase subunit secF Length = 317 Score = 416 bits (1069), Expect = e-114, Method: Compositional matrix adjust. Identities = 195/265 (73%), Positives = 234/265 (88%), Gaps = 2/265 (0%) Query: 1 MEFFRIKKDIPFMRHALIFNAISALTFVAAVFFLFSKGLHFSIEFTGGTVMEVAYNKPAD 60 MEFFRIKKDIPFM++AL+ NA+S +TF AVFFL ++GLH S+EFTGGTVMEVAY + AD Sbjct: 1 MEFFRIKKDIPFMKYALVLNAVSFITFALAVFFLVTRGLHLSVEFTGGTVMEVAYTQTAD 60 Query: 61 LEKIRKSIEGLGYRDTLVQSFGTAQDVMIRLPAQAGVNASQQTEKVNAALKADDPDVRLQ 120 + K+R ++ GLGY D +VQ+FGT++DVMIRLP Q GV ++QQ+E+V +ALKA DP+V L+ Sbjct: 61 IGKVRDTVAGLGYADVVVQNFGTSRDVMIRLPVQKGVTSAQQSEQVLSALKAQDPEVTLR 120 Query: 121 RVEFVGPQVGDELAHDGLLALGMVVLGIVIYLAFRFEWKFAVAAVIANLHDIIIILGFFA 180 R EFVGPQVG+EL H GL+ALGMVVLGIVIYLAFRFEWKF VAAVIANLHD++IILGFFA Sbjct: 121 RTEFVGPQVGEELVHSGLMALGMVVLGIVIYLAFRFEWKFGVAAVIANLHDVVIILGFFA 180 Query: 181 FFQWEFSLTVLAAILAVLGYSVNESVVVFDRVREAFRDRRFGKLSPPEVLNHAITSTMSR 240 FFQWEFSL+VLA +LAVLGYSVNESVV+FDR+REAF R+F KL+ EV++HAITSTMSR Sbjct: 181 FFQWEFSLSVLAGVLAVLGYSVNESVVIFDRIREAF--RKFRKLNTHEVIDHAITSTMSR 238 Query: 241 TVITHGSTEMMVLAMFFFGGPTLHY 265 T+ITH STE MVL+MFFFGGP+LHY Sbjct: 239 TIITHASTEAMVLSMFFFGGPSLHY 263 >B9MHS2.1 B9MHS2_ACIET Protein-export membrane protein SecF Length = 317 Score = 414 bits (1065), Expect = e-114, Method: Compositional matrix adjust. Identities = 194/265 (73%), Positives = 234/265 (88%), Gaps = 2/265 (0%) Query: 1 MEFFRIKKDIPFMRHALIFNAISALTFVAAVFFLFSKGLHFSIEFTGGTVMEVAYNKPAD 60 MEFFRIKKDIPFM++AL+ NA+S +TF AVFFL ++GLH S+EFTGGTVMEVAY + AD Sbjct: 1 MEFFRIKKDIPFMKYALVLNAVSFITFALAVFFLVTRGLHLSVEFTGGTVMEVAYTQTAD 60 Query: 61 LEKIRKSIEGLGYRDTLVQSFGTAQDVMIRLPAQAGVNASQQTEKVNAALKADDPDVRLQ 120 + K+R ++ GLGY D +VQ+FGT++DVM+RLP Q GV ++QQ+E+V +ALKA DP+V L+ Sbjct: 61 IGKVRDTVAGLGYADVVVQNFGTSRDVMVRLPVQKGVTSAQQSEQVLSALKAQDPEVTLR 120 Query: 121 RVEFVGPQVGDELAHDGLLALGMVVLGIVIYLAFRFEWKFAVAAVIANLHDIIIILGFFA 180 R EFVGPQVG+EL H GL+ALGMVVLGIVIYLAFRFEWKF VAAVIANLHD++IILGFFA Sbjct: 121 RTEFVGPQVGEELVHGGLMALGMVVLGIVIYLAFRFEWKFGVAAVIANLHDVVIILGFFA 180 Query: 181 FFQWEFSLTVLAAILAVLGYSVNESVVVFDRVREAFRDRRFGKLSPPEVLNHAITSTMSR 240 FFQWEFSL+VLA +LAVLGYSVNESVV+FDR+REAF R+F KL+ EV++HAITSTMSR Sbjct: 181 FFQWEFSLSVLAGVLAVLGYSVNESVVIFDRIREAF--RKFRKLNTHEVIDHAITSTMSR 238 Query: 241 TVITHGSTEMMVLAMFFFGGPTLHY 265 T+ITH STE MVL+MFFFGGP+LHY Sbjct: 239 TIITHASTEAMVLSMFFFGGPSLHY 263 >C5T8N8.1 C5T8N8_ACIDE Protein-export membrane protein SecF Length = 316 Score = 414 bits (1063), Expect = e-113, Method: Compositional matrix adjust. Identities = 194/265 (73%), Positives = 234/265 (88%), Gaps = 2/265 (0%) Query: 1 MEFFRIKKDIPFMRHALIFNAISALTFVAAVFFLFSKGLHFSIEFTGGTVMEVAYNKPAD 60 MEFFRI+KDIPFM+HAL+FNAIS +TF AVFFL ++GLH S+EFTGGTVMEVAY++PA+ Sbjct: 1 MEFFRIRKDIPFMKHALVFNAISFITFALAVFFLLTRGLHLSVEFTGGTVMEVAYSQPAE 60 Query: 61 LEKIRKSIEGLGYRDTLVQSFGTAQDVMIRLPAQAGVNASQQTEKVNAALKADDPDVRLQ 120 L K+R+++ +GY D VQ+FGTA+DVMIRLP Q GV ++QQ+E+V AALKA DP V L+ Sbjct: 61 LAKVRETVASMGYPDVQVQNFGTARDVMIRLPVQKGVTSAQQSEQVIAALKAGDPAVTLR 120 Query: 121 RVEFVGPQVGDELAHDGLLALGMVVLGIVIYLAFRFEWKFAVAAVIANLHDIIIILGFFA 180 R EFVGPQVG+EL H GL+AL MVV+GIV+YLAFRFEWKF VAA+IANLHD++IILGFFA Sbjct: 121 RTEFVGPQVGEELVHGGLMALAMVVVGIVVYLAFRFEWKFGVAAIIANLHDVVIILGFFA 180 Query: 181 FFQWEFSLTVLAAILAVLGYSVNESVVVFDRVREAFRDRRFGKLSPPEVLNHAITSTMSR 240 FFQWEFSL+VLAA+LAVLGYSVNESVV+FDR+REAFR R K++ EV++HAITSTMSR Sbjct: 181 FFQWEFSLSVLAAVLAVLGYSVNESVVIFDRIREAFRKYR--KMNTHEVIDHAITSTMSR 238 Query: 241 TVITHGSTEMMVLAMFFFGGPTLHY 265 T+ITH STE MVL+MFFFGGP+LHY Sbjct: 239 TIITHASTEAMVLSMFFFGGPSLHY 263 >B3R6J7.1 B3R6J7_CUPTR Protein-export membrane protein Length = 323 Score = 411 bits (1057), Expect = e-113, Method: Compositional matrix adjust. Identities = 202/270 (74%), Positives = 231/270 (85%), Gaps = 7/270 (2%) Query: 1 MEFFRIKKDIPFMRHALIFNAISALTFVAAVFFLFSKGLHFSIEFTGGTVMEVAYNKPAD 60 MEFFRI++DIPFM+HALIFN IS LTF AAVFFL+ KGLH SIEFTGGTVMEV+Y + AD Sbjct: 1 MEFFRIRRDIPFMKHALIFNVISFLTFAAAVFFLWQKGLHLSIEFTGGTVMEVSYQQAAD 60 Query: 61 LEKIRKSIEGLGYRDTLVQSFGTAQDVMIRLPAQAG-----VNASQQTEKVNAALKADDP 115 LEKIR + LGY D VQ+FGT++DVMIRLP Q G ++QQ+E+V AL A P Sbjct: 61 LEKIRGQVSKLGYTDVQVQNFGTSRDVMIRLPLQKGPDGKPATSAQQSEQVMGALTAASP 120 Query: 116 DVRLQRVEFVGPQVGDELAHDGLLALGMVVLGIVIYLAFRFEWKFAVAAVIANLHDIIII 175 DV+LQRVEFVGPQVG ELA DGLLAL V++GIVIYL+FRFEWKFAVA +IANLHDI+II Sbjct: 121 DVKLQRVEFVGPQVGKELATDGLLALLCVIIGIVIYLSFRFEWKFAVAGIIANLHDIVII 180 Query: 176 LGFFAFFQWEFSLTVLAAILAVLGYSVNESVVVFDRVREAFRDRRFGKLSPPEVLNHAIT 235 LGFFAFFQWEFSL+VLAAILAVLGYSVNESVV+FDR+REAFR R K++ EV++HAIT Sbjct: 181 LGFFAFFQWEFSLSVLAAILAVLGYSVNESVVIFDRIREAFRKYR--KMTTHEVIDHAIT 238 Query: 236 STMSRTVITHGSTEMMVLAMFFFGGPTLHY 265 STMSRT+ITHGSTEMMVL+MFFFGGPTLHY Sbjct: 239 STMSRTIITHGSTEMMVLSMFFFGGPTLHY 268